Pregenerated sensors for IL23R (Mus musculus)
Ensembl gene IDs: ENSMUSG00000049093Ensembl transcript IDs: ENSMUST00000118364.2
Found 92 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CAA 90 bp | TCCTGGAGTCATGGCAGTGTACTTATACTTCTTTTGAGGGAAGTTTaGGCTTGCAGTGGAAAGGCAGCTTCTCACCTTGACTTTGATGGC | + |
|
Preference number: 2 (lower is better) Translates to: SWSHGSVLILLLREV*ACSGKAASHLDFDG Trigger: GCCATCAAAGTCAAGGTGAGAAGCTGCCTTTCCACTGCAAGCCAAAACTTCCCTCAAAAGAAGTATAAGTACACTGCCATGACTCCAGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118364.2 |
||
| 3UTR-3UTR CCA 90 bp | GAGGTAAGTTCCATCCTGGAGTCATGGCAGTGTACTTATACTTCTTTTGAGGGAAGTTTTGGCTTGCAGTaGAAAGGCAGCTTCTCACCT | + |
|
Preference number: 2 (lower is better) Translates to: EVSSILESWQCTYTSFEGSFGLQ*KGSFSP Trigger: AGGTGAGAAGCTGCCTTTCCACTGCAAGCCAAAACT...TCCCTCAAAAGAAGTATAAGTACACTGCCATGACTCCAGGATGGAACTTACCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000118364.2 |
||
| 3UTR-3UTR GCA 90 bp | TGTACTGTACAATTTAATGACAGAAGTAGGAAAGAAATAGCCCTGGTGGCACACAGGGAAGTTTTGGCTTaGAGTGGAAAGGCAGCTTCT | + |
|
Preference number: 2 (lower is better) Translates to: CTVQFNDRSRKEIALVAHREVLA*SGKAAS Trigger: AGAAGCTGCCTTTCCACTGCAAGCCAAAACTTCCCT...GTGTGCCACCAGGGCTATTTCTTTCCTACTTCTGTCATTAAATTGTACAGTACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118364.2 |
||
| 3UTR-3UTR CCA 90 bp | TGTACTGTACAATTTAATGACAGAAGTAGGAAAGAAATAGCCCTGGTGGCACACTCCATCCTGGAGTCATaGCAGTGTACTTATACTTCT | + |
|
Preference number: 2 (lower is better) Translates to: CTVQFNDRSRKEIALVAHSILES*QCTYTS Trigger: AGAAGTATAAGTACACTGCCATGACTCCAGGATGGA...GTGTGCCACCAGGGCTATTTCTTTCCTACTTCTGTCATTAAATTGTACAGTACA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118364.2 |
||
| 3UTR-3UTR CCA 90 bp | ACTGTACAATTTAATGACAGAAGTAGGAAAGAAATAGCCCTGGTGGCACACACCTTTAATCCTAGCACTTaGGAAGAAGAGGCAGGAAAA | + |
|
Preference number: 2 (lower is better) Translates to: TVQFNDRSRKEIALVAHTFNPST*EEEAGK Trigger: TTTTCCTGCCTCTTCTTCCCAAGTGCTAGGATTAAA...GGTGTGTGCCACCAGGGCTATTTCTTTCCTACTTCTGTCATTAAATTGTACAGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118364.2 |
||
| 3UTR CCA 72 bp | TGTTTTGCCAGTGAGGTAAGTTCCATCCTGGAGTCATaGCAGTGTACTTATACTTCTTTTGAGGGAAGTTTT | + |
|
Preference number: 3 (lower is better) Translates to: CFASEVSSILES*QCTYTSFEGSF Trigger: AAAACTTCCCTCAAAAGAAGTATAAGTACACTGCCATGACTCCAGGATGGAACTTACCTCACTGGCAAAACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000118364.2 |
||
| CDS-3UTR TCA 90 bp | ACTGTACAATTTAATGACAGAAGTAGGAAAGAAATAGCCCTGGTGGCACACACCCTCCGTGACACCATCTaGAGAGCACATAAAGGGCTA | + |
|
Preference number: 4 (lower is better) Translates to: TVQFNDRSRKEIALVAHTLRDTI*RAHKGL Trigger: TAGCCCTTTATGTGCTCTTCAGATGGTGTCACGGAG...GGTGTGTGCCACCAGGGCTATTTCTTTCCTACTTCTGTCATTAAATTGTACAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118364.2 |
||
| CDS-3UTR TCA 90 bp | TGTACTGTACAATTTAATGACAGAAGTAGGAAAGAAATAGCCCTGGTGGCACACCCATGCCTAGGGAATTaGCAGCTTGGACCCATACCA | + |
|
Preference number: 4 (lower is better) Translates to: CTVQFNDRSRKEIALVAHPCLGN*QLGPIP Trigger: TGGTATGGGTCCAAGCTGTCAATTCCCTAGGCATGG...GTGTGCCACCAGGGCTATTTCTTTCCTACTTCTGTCATTAAATTGTACAGTACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118364.2 |
||
| CDS-3UTR TCA 90 bp | ACTGTACAATTTAATGACAGAAGTAGGAAAGAAATAGCCCTGGTGGCACACACCTCTCAGCCCTGGAAATaGTGGACGCAGAAGGTATCA | + |
|
Preference number: 4 (lower is better) Translates to: TVQFNDRSRKEIALVAHTSQPWK*WTQKVS Trigger: TGATACCTTCTGCGTCCATCATTTCCAGGGCTGAGA...GGTGTGTGCCACCAGGGCTATTTCTTTCCTACTTCTGTCATTAAATTGTACAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118364.2 |
||
| CDS-3UTR CCA 90 bp | CTTATACTTCTTTTGAGGGAAGTTTTGGCTTGCAGTGGAAAGGCAGCTTCTCACGTTTCTTGGGAAGTTTaGTGGACAAAGGGGGAACTC | + |
|
Preference number: 4 (lower is better) Translates to: LILLLREVLACSGKAASHVSWEV*WTKGEL Trigger: GAGTTCCCCCTTTGTCCACCAAACTTCCCAAGAAAC...GTGAGAAGCTGCCTTTCCACTGCAAGCCAAAACTTCCCTCAAAAGAAGTATAAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000118364.2 |
||
| CDS-3UTR CCA 90 bp | GAGGTAAGTTCCATCCTGGAGTCATGGCAGTGTACTTATACTTCTTTTGAGGGAACCTGGGAAACTGTCTaGGAAGTTTGGTGGACAAAG | + |
|
Preference number: 4 (lower is better) Translates to: EVSSILESWQCTYTSFEGTWETV*EVWWTK Trigger: CTTTGTCCACCAAACTTCCCAGACAGTTTCCCAGGT...TCCCTCAAAAGAAGTATAAGTACACTGCCATGACTCCAGGATGGAACTTACCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118364.2 |
||
| 3UTR CAA 72 bp | CATGGCAGTGTACTTATACTTCTTTTGAGGGAAGTTTaGGCTTGCAGTGGAAAGGCAGCTTCTCACCTTGAC | + |
|
Preference number: 4 (lower is better) Translates to: HGSVLILLLREV*ACSGKAASHLD Trigger: GTCAAGGTGAGAAGCTGCCTTTCCACTGCAAGCCAAAACTTCCCTCAAAAGAAGTATAAGTACACTGCCATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118364.2 |
||
| CDS-3UTR GCA 90 bp | TGTACTGTACAATTTAATGACAGAAGTAGGAAAGAAATAGCCCTGGTGGCACACTCCCAGTGTTCCAGGTaGATGTCATGTTGCCTGAGT | + |
|
Preference number: 4 (lower is better) Translates to: CTVQFNDRSRKEIALVAHSQCSR*MSCCLS Trigger: ACTCAGGCAACATGACATGCACCTGGAACACTGGGA...GTGTGCCACCAGGGCTATTTCTTTCCTACTTCTGTCATTAAATTGTACAGTACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118364.2 |
||
| CDS-3UTR GCA 90 bp | TGTACTGTACAATTTAATGACAGAAGTAGGAAAGAAATAGCCCTGGTGGCACACTACTTCCTGCTGCCTTaGAGTGAGTCAGTGGAGATC | + |
|
Preference number: 4 (lower is better) Translates to: CTVQFNDRSRKEIALVAHYFLLP*SESVEI Trigger: GATCTCCACTGACTCACTGCAAGGCAGCAGGAAGTA...GTGTGCCACCAGGGCTATTTCTTTCCTACTTCTGTCATTAAATTGTACAGTACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118364.2 |
||
| CDS-3UTR GCA 90 bp | CTGAGCTGTACTGTACAATTTAATGACAGAAGTAGGAAAGAAATAGCCCTGGTGCCAAATACTTCCTGCTaGCTTGCAGTGAGTCAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: LSCTVQFNDRSRKEIALVPNTSC*LAVSQW Trigger: CCACTGACTCACTGCAAGGCAGCAGGAAGTATTTGG...CACCAGGGCTATTTCTTTCCTACTTCTGTCATTAAATTGTACAGTACAGCTCAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118364.2 |
||
| CDS-3UTR GCA 90 bp | ACTGTACAATTTAATGACAGAAGTAGGAAAGAAATAGCCCTGGTGGCACACACCTCCACATACAGGGCCTaGTCACTGGCATTATCATTC | + |
|
Preference number: 4 (lower is better) Translates to: TVQFNDRSRKEIALVAHTSTYRA*SLALSF Trigger: GAATGATAATGCCAGTGAGCAGGCCCTGTATGTGGA...GGTGTGTGCCACCAGGGCTATTTCTTTCCTACTTCTGTCATTAAATTGTACAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118364.2 |
||
| CDS-3UTR GCA 90 bp | GAGGTAAGTTCCATCCTGGAGTCATGGCAGTGTACTTATACTTCTTTTGAGGGACACTTTGCAAAACGATaGTGGTTTCCTCCTGTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: EVSSILESWQCTYTSFEGHFAKR*WFPPVL Trigger: CAAGACAGGAGGAAACCAGCATCGTTTTGCAAAGTG...TCCCTCAAAAGAAGTATAAGTACACTGCCATGACTCCAGGATGGAACTTACCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000118364.2 |
||
| CDS-3UTR GCA 90 bp | ACTGTACAATTTAATGACAGAAGTAGGAAAGAAATAGCCCTGGTGGCACACACCTCAGACAACAGAGTCTaGGCTGGGATAGTTTCACTG | + |
|
Preference number: 4 (lower is better) Translates to: TVQFNDRSRKEIALVAHTSDNRV*AGIVSL Trigger: CAGTGAAACTATCCCAGCGCAGACTCTGTTGTCTGA...GGTGTGTGCCACCAGGGCTATTTCTTTCCTACTTCTGTCATTAAATTGTACAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118364.2 |
||
| CDS-3UTR CCA 90 bp | CTGAGCTGTACTGTACAATTTAATGACAGAAGTAGGAAAGAAATAGCCCTGGTGACTGTCTGGGAAGTTTaGTGGACAAAGGGGGAACTC | + |
|
Preference number: 4 (lower is better) Translates to: LSCTVQFNDRSRKEIALVTVWEV*WTKGEL Trigger: GAGTTCCCCCTTTGTCCACCAAACTTCCCAGACAGT...CACCAGGGCTATTTCTTTCCTACTTCTGTCATTAAATTGTACAGTACAGCTCAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000118364.2 |
||
| CDS-3UTR TCA 90 bp | CTTATACTTCTTTTGAGGGAAGTTTTGGCTTGCAGTGGAAAGGCAGCTTCTCACCTCCAGGTAGAATTCTaGCTGCTGTACATATGTGAA | + |
|
Preference number: 4 (lower is better) Translates to: LILLLREVLACSGKAASHLQVEF*LLYICE Trigger: TTCACATATGTACAGCAGTCAGAATTCTACCTGGAG...GTGAGAAGCTGCCTTTCCACTGCAAGCCAAAACTTCCCTCAAAAGAAGTATAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000118364.2 |
||
| CDS-3UTR GCA 90 bp | AGTTCCATCCTGGAGTCATGGCAGTGTACTTATACTTCTTTTGAGGGAAGTTTTGGGGAACTCCAAGGCTaGCAGTTTCTTTTACCAGTT | + |
|
Preference number: 4 (lower is better) Translates to: SSILESWQCTYTSFEGSFGELQG*QFLLPV Trigger: AACTGGTAAAAGAAACTGGCAGCCTTGGAGTTCCCC...AAAACTTCCCTCAAAAGAAGTATAAGTACACTGCCATGACTCCAGGATGGAACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000118364.2 |
||
| CDS-3UTR GCA 90 bp | TGTACTGTACAATTTAATGACAGAAGTAGGAAAGAAATAGCCCTGGTGGCACACCTGGGTGAGTCACTTTaGAAAACGATGCTGGTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: CTVQFNDRSRKEIALVAHLGESL*KTMLVS Trigger: GGAAACCAGCATCGTTTTGCAAAGTGACTCACCCAG...GTGTGCCACCAGGGCTATTTCTTTCCTACTTCTGTCATTAAATTGTACAGTACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118364.2 |
||
| CDS-3UTR CCA 90 bp | ACTTATACTTCTTTTGAGGGAAGTTTTGGCTTGCAGTGGAAAGGCAGCTTCTCACTTCTTTGTAATCTGTaGGTTTGTGTTCCAGGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: TYTSFEGSFGLQWKGSFSLLCNL*VCVPGE Trigger: CTCCCCTGGAACACAAACCCACAGATTACAAAGAAG...TGAGAAGCTGCCTTTCCACTGCAAGCCAAAACTTCCCTCAAAAGAAGTATAAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000118364.2 |
||
| CDS-3UTR TCA 90 bp | CTTATACTTCTTTTGAGGGAAGTTTTGGCTTGCAGTGGAAAGGCAGCTTCTCACCTGAGTATTCATAAATaGCACATGTCAGATTGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: LILLLREVLACSGKAASHLSIHK*HMSDCW Trigger: CCAGCAATCTGACATGTGTCATTTATGAATACTCAG...GTGAGAAGCTGCCTTTCCACTGCAAGCCAAAACTTCCCTCAAAAGAAGTATAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000118364.2 |
||
| CDS-3UTR TCA 90 bp | CTTATACTTCTTTTGAGGGAAGTTTTGGCTTGCAGTGGAAAGGCAGCTTCTCACGCATGTCATGTTGCCTaGGTATTCATAAATGACACA | + |
|
Preference number: 4 (lower is better) Translates to: LILLLREVLACSGKAASHACHVA*VFINDT Trigger: TGTGTCATTTATGAATACTCAGGCAACATGACATGC...GTGAGAAGCTGCCTTTCCACTGCAAGCCAAAACTTCCCTCAAAAGAAGTATAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000118364.2 |
||
| CDS-3UTR TCA 90 bp | CTGAGCTGTACTGTACAATTTAATGACAGAAGTAGGAAAGAAATAGCCCTGGTGGTCTTGATGATTACCTaGAGCAGGATGTCCTCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: LSCTVQFNDRSRKEIALVVLMIT*SRMSSE Trigger: TTCAGAGGACATCCTGCTTCAGGTAATCATCAAGAC...CACCAGGGCTATTTCTTTCCTACTTCTGTCATTAAATTGTACAGTACAGCTCAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118364.2 |
||
| CDS-3UTR GCA 90 bp | GTACAATTTAATGACAGAAGTAGGAAAGAAATAGCCCTGGTGGCACACACCTTTCAGGACATTCAGCAGTaGAATGCATATAGGCATGAG | + |
|
Preference number: 4 (lower is better) Translates to: VQFNDRSRKEIALVAHTFQDIQQ*NAYRHE Trigger: CTCATGCCTATATGCATTGCACTGCTGAATGTCCTG...AAAGGTGTGTGCCACCAGGGCTATTTCTTTCCTACTTCTGTCATTAAATTGTAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118364.2 |
||
| CDS-3UTR GCA 90 bp | GTACAATTTAATGACAGAAGTAGGAAAGAAATAGCCCTGGTGGCACACACCTTTATACCAAATACTTCCTaGTGCCTTGCAGTGAGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: VQFNDRSRKEIALVAHTFIPNTS*CLAVSQ Trigger: CTGACTCACTGCAAGGCAGCAGGAAGTATTTGGTAT...AAAGGTGTGTGCCACCAGGGCTATTTCTTTCCTACTTCTGTCATTAAATTGTAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118364.2 |
||
| CDS-3UTR GCA 90 bp | GAGTTCAGCCATCCTCAAATATATAGTGAGTTAGTCCTTTTGGGCTTTGTGACCCTTGAAATACATACTTaGTGTCTGGCTCCAGGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: EFSHPQIYSELVLLGFVTLEIHT*CLAPGR Trigger: TCTACCTGGAGCCAGACAGCAAGTATGTATTTCAAG...GGTCACAAAGCCCAAAAGGACTAACTCACTATATATTTGAGGATGGCTGAACTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118364.2 |
||
| CDS-3UTR CCA 90 bp | TATAGTGAGTTAGTCCTTTTGGGCTTTGTGACCTCCTGTCTCAAGTGGAGATATAGGGAATTGACAGCTTaGACCCATACCAAATACTTC | + |
|
Preference number: 4 (lower is better) Translates to: YSELVLLGFVTSCLKWRYRELTA*THTKYF Trigger: GAAGTATTTGGTATGGGTCCAAGCTGTCAATTCCCT...ATATCTCCACTTGAGACAGGAGGTCACAAAGCCCAAAAGGACTAACTCACTATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118364.2 |
||
| CDS-3UTR CCA 90 bp | TATAGTGAGTTAGTCCTTTTGGGCTTTGTGACCTCCTGTCTCAAGTGGAGATATGATTTTGCTGTAACCTaGGAAACTGTCTGGGAAGTT | + |
|
Preference number: 4 (lower is better) Translates to: YSELVLLGFVTSCLKWRYDFAVT*ETVWEV Trigger: AACTTCCCAGACAGTTTCCCAGGTTACAGCAAAATC...ATATCTCCACTTGAGACAGGAGGTCACAAAGCCCAAAAGGACTAACTCACTATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000118364.2 |
||
| CDS-3UTR CCA 90 bp | GAGTTCAGCCATCCTCAAATATATAGTGAGTTAGTCCTTTTGGGCTTTGTGACCGGAACATTTGAAACCTaGGGTTTGTATCCAGTGTTG | + |
|
Preference number: 4 (lower is better) Translates to: EFSHPQIYSELVLLGFVTGTFET*GLYPVL Trigger: CAACACTGGATACAAACCCCAGGTTTCAAATGTTCC...GGTCACAAAGCCCAAAAGGACTAACTCACTATATATTTGAGGATGGCTGAACTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118364.2 |
||
| CDS-3UTR TCA 90 bp | GAGGTAAGTTCCATCCTGGAGTCATGGCAGTGTACTTATACTTCTTTTGAGGGAACTGCTGTACATATGTaGAATTGGCGTCAAATTCTT | + |
|
Preference number: 4 (lower is better) Translates to: EVSSILESWQCTYTSFEGTAVHM*NWRQIL Trigger: AAGAATTTGACGCCAATTTCACATATGTACAGCAGT...TCCCTCAAAAGAAGTATAAGTACACTGCCATGACTCCAGGATGGAACTTACCTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118364.2 |
||
| CDS-3UTR TCA 90 bp | AGTTCCATCCTGGAGTCATGGCAGTGTACTTATACTTCTTTTGAGGGAAGTTTTTCTCAAGGAGTCCTGTaGGCCTTTCTTCTTTGTAAT | + |
|
Preference number: 4 (lower is better) Translates to: SSILESWQCTYTSFEGSFSQGVL*AFLLCN Trigger: ATTACAAAGAAGAAAGGCTCACAGGACTCCTTGAGA...AAAACTTCCCTCAAAAGAAGTATAAGTACACTGCCATGACTCCAGGATGGAACT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000118364.2 |
||
| CDS-3UTR TCA 90 bp | TATAGTGAGTTAGTCCTTTTGGGCTTTGTGACCTCCTGTCTCAAGTGGAGATATGTTTGTATCCAGTGTTaGGGTCAGGAATATACACAA | + |
|
Preference number: 4 (lower is better) Translates to: YSELVLLGFVTSCLKWRYVCIQC*GQEYTQ Trigger: TTGTGTATATTCCTGACCTCAACACTGGATACAAAC...ATATCTCCACTTGAGACAGGAGGTCACAAAGCCCAAAAGGACTAACTCACTATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118364.2 |
||
| CDS-3UTR TCA 90 bp | ACTTATACTTCTTTTGAGGGAAGTTTTGGCTTGCAGTGGAAAGGCAGCTTCTCACTACTTTTGGAAGAGTaGAATTCTACTGAAATGGCT | + |
|
Preference number: 4 (lower is better) Translates to: TYTSFEGSFGLQWKGSFSLLLEE*NSTEMA Trigger: AGCCATTTCAGTAGAATTTCACTCTTCCAAAAGTAG...TGAGAAGCTGCCTTTCCACTGCAAGCCAAAACTTCCCTCAAAAGAAGTATAAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000118364.2 |
||
| CDS-3UTR CCA 90 bp | AGTTCCATCCTGGAGTCATGGCAGTGTACTTATACTTCTTTTGAGGGAAGTTTTCTTTTACCAGTTTCTTaGGAAGTTTGGTGGACAAAG | + |
|
Preference number: 4 (lower is better) Translates to: SSILESWQCTYTSFEGSFLLPVS*EVWWTK Trigger: CTTTGTCCACCAAACTTCCCAAGAAACTGGTAAAAG...AAAACTTCCCTCAAAAGAAGTATAAGTACACTGCCATGACTCCAGGATGGAACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000118364.2 |
||
| CDS-3UTR GCA 90 bp | ACTTATACTTCTTTTGAGGGAAGTTTTGGCTTGCAGTGGAAAGGCAGCTTCTCATCCAAACTCTTCACATaGACAATATACTTGGTATCT | + |
|
Preference number: 4 (lower is better) Translates to: TYTSFEGSFGLQWKGSFSSKLFT*TIYLVS Trigger: AGATACCAAGTATATTGTGCATGTGAAGAGTTTGGA...TGAGAAGCTGCCTTTCCACTGCAAGCCAAAACTTCCCTCAAAAGAAGTATAAGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000118364.2 |
||
| CDS-3UTR CCA 90 bp | ACTTATACTTCTTTTGAGGGAAGTTTTGGCTTGCAGTGGAAAGGCAGCTTCTCACTTGAAGCAGAAAATTaGAAGTTGGGATATGTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: TYTSFEGSFGLQWKGSFSLEAEN*KLGYVF Trigger: GAAAACATATCCCAACTTCCAATTTTCTGCTTCAAG...TGAGAAGCTGCCTTTCCACTGCAAGCCAAAACTTCCCTCAAAAGAAGTATAAGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000118364.2 |
||
| CDS-3UTR CCA 90 bp | GTACAATTTAATGACAGAAGTAGGAAAGAAATAGCCCTGGTGGCACACACCTTTTGCTTAAGGGCTTCTTaGCAATATATAGAAACATTC | + |
|
Preference number: 4 (lower is better) Translates to: VQFNDRSRKEIALVAHTFCLRAS*QYIETF Trigger: GAATGTTTCTATATATTGCCAAGAAGCCCTTAAGCA...AAAGGTGTGTGCCACCAGGGCTATTTCTTTCCTACTTCTGTCATTAAATTGTAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118364.2 |
||
| CDS-3UTR CCA 90 bp | TGTACTGTACAATTTAATGACAGAAGTAGGAAAGAAATAGCCCTGGTGGCACACCAGAAAATTGGAAGTTaGGATATGTTTTCAATCTGG | + |
|
Preference number: 4 (lower is better) Translates to: CTVQFNDRSRKEIALVAHQKIGS*DMFSIW Trigger: CCAGATTGAAAACATATCCCAACTTCCAATTTTCTG...GTGTGCCACCAGGGCTATTTCTTTCCTACTTCTGTCATTAAATTGTACAGTACA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000118364.2 |
||
| CDS-3UTR CCA 90 bp | CTGAGCTGTACTGTACAATTTAATGACAGAAGTAGGAAAGAAATAGCCCTGGTGGAAATTCTACTGAAATaGCTTTCCAAAACGTTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: LSCTVQFNDRSRKEIALVEILLK*LSKTFC Trigger: ACAGAACGTTTTGGAAAGCCATTTCAGTAGAATTTC...CACCAGGGCTATTTCTTTCCTACTTCTGTCATTAAATTGTACAGTACAGCTCAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118364.2 |
||
| CDS TCA 90 bp | TCCCAGTGTTCCAGGTGCATGTCATGTTGCCTGAGTATTCATAAATaGCACATGTCAGATTGCTGGGGGCATCCGGTGGATGTCCAGAGG | + |
|
Preference number: 5 (lower is better) Translates to: SQCSRCMSCCLSIHK*HMSDCWGHPVDVQR Trigger: CCTCTGGACATCCACCGGATGCCCCCAGCAATCTGACATGTGTCATTTATGAATACTCAGGCAACATGACATGCACCTGGAACACTGGGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000118364.2 |
||
| CDS TCA 90 bp | CCAGATGGACGTGTAGTTGTTGTGAGTTCTCCATGCCTAGGGAATTaGCAGCTTGGACCCATACCAAATACTTCCTGCTGCCTTGCAGTG | + |
|
Preference number: 5 (lower is better) Translates to: PDGRVVVVSSPCLGN*QLGPIPNTSCCLAV Trigger: CACTGCAAGGCAGCAGGAAGTATTTGGTATGGGTCCAAGCTGTCAATTCCCTAGGCATGGAGAACTCACAACAACTACACGTCCATCTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118364.2 |
||
| CDS CCA 90 bp | ACGTGTAGTTGTTGTGAGTTCTCCATGCCTAGGGAATTGACAGCTTaGACCCATACCAAATACTTCCTGCTGCCTTGCAGTGAGTCAGTG | + |
|
Preference number: 5 (lower is better) Translates to: TCSCCEFSMPRELTA*THTKYFLLPCSESV Trigger: CACTGACTCACTGCAAGGCAGCAGGAAGTATTTGGTATGGGTCCAAGCTGTCAATTCCCTAGGCATGGAGAACTCACAACAACTACACGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118364.2 |
||
| CDS-3UTR CAA 90 bp | GAGTTCAGCCATCCTCAAATATATAGTGAGTTAGTCCTTTTGGGCTTTGTGACCTCCATGCCTAGGGAATaGACAGCTTGGACCCATACC | + |
|
Preference number: 5 (lower is better) Translates to: EFSHPQIYSELVLLGFVTSMPRE*TAWTHT Trigger: GGTATGGGTCCAAGCTGTCAATTCCCTAGGCATGGA...GGTCACAAAGCCCAAAAGGACTAACTCACTATATATTTGAGGATGGCTGAACTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118364.2 |
||
| CDS GCA 90 bp | TTCCCAATTGCCAAACAGGAGACAAATTCATCAGACAACAGAGTCTaGGCTGGGATAGTTTCACTGGGTGAGTCACTTTGCAAAACGATG | + |
|
Preference number: 5 (lower is better) Translates to: FPIAKQETNSSDNRV*AGIVSLGESLCKTM Trigger: CATCGTTTTGCAAAGTGACTCACCCAGTGAAACTATCCCAGCGCAGACTCTGTTGTCTGATGAATTTGTCTCCTGTTTGGCAATTGGGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118364.2 |
||
| CDS TCA 90 bp | CAAGAAGACCATTCCCGACAAAAGTCCAATGTCTTGATGATTACCTaGAGCAGGATGTCCTCTGAAGATTGTAGCACTGAGCATCTCCAT | + |
|
Preference number: 5 (lower is better) Translates to: QEDHSRQKSNVLMIT*SRMSSEDCSTEHLH Trigger: ATGGAGATGCTCAGTGCTACAATCTTCAGAGGACATCCTGCTTCAGGTAATCATCAAGACATTGGACTTTTGTCGGGAATGGTCTTCTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118364.2 |
||
| CDS-3UTR CAA 90 bp | TGTACTGTACAATTTAATGACAGAAGTAGGAAAGAAATAGCCCTGGTGGCACACAGTTTCTTGGGAAGTTaGGTGGACAAAGGGGGAACT | + |
|
Preference number: 5 (lower is better) Translates to: CTVQFNDRSRKEIALVAHSFLGS*VDKGGT Trigger: AGTTCCCCCTTTGTCCACCAAACTTCCCAAGAAACT...GTGTGCCACCAGGGCTATTTCTTTCCTACTTCTGTCATTAAATTGTACAGTACA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000118364.2 |
||
| CDS-3UTR CAA 90 bp | AGTTCCATCCTGGAGTCATGGCAGTGTACTTATACTTCTTTTGAGGGAAGTTTTCTCCAGGAGGAACATTaGAAACCTGGGGTTTGTATC | + |
|
Preference number: 5 (lower is better) Translates to: SSILESWQCTYTSFEGSFLQEEH*KPGVCI Trigger: GATACAAACCCCAGGTTTCAAATGTTCCTCCTGGAG...AAAACTTCCCTCAAAAGAAGTATAAGTACACTGCCATGACTCCAGGATGGAACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000118364.2 |
||
| CDS GCA 90 bp | TCCCACAAATCAGTGTCTCTTGAAAATGACCAGGACATTCAGCAGTaGAATGCATATAGGCATGAGGTTCCGAAAAGCCTTTATACCAAA | + |
|
Preference number: 5 (lower is better) Translates to: SHKSVSLENDQDIQQ*NAYRHEVPKSLYTK Trigger: TTTGGTATAAAGGCTTTTCGGAACCTCATGCCTATATGCATTGCACTGCTGAATGTCCTGGTCATTTTCAAGAGACACTGATTTGTGGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000118364.2 |
||
| CDS GCA 90 bp | CTGTGGAAAGTAAGAATTAATAGATGGCAAGTCTTCATTCCCAATTaGCAAACAGGAGACAAATTCATCAGACAACAGAGTCTGCGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: LWKVRINRWQVFIPN*QTGDKFIRQQSLRW Trigger: CCAGCGCAGACTCTGTTGTCTGATGAATTTGTCTCCTGTTTGGCAATTGGGAATGAAGACTTGCCATCTATTAATTCTTACTTTCCACAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118364.2 |
||
| CDS-3UTR CAA 90 bp | GTACAATTTAATGACAGAAGTAGGAAAGAAATAGCCCTGGTGGCACACACCTTTTTTGAAACCTGGGGTTaGTATCCAGTGTTGAGGTCA | + |
|
Preference number: 5 (lower is better) Translates to: VQFNDRSRKEIALVAHTFFETWG*YPVLRS Trigger: TGACCTCAACACTGGATACAAACCCCAGGTTTCAAA...AAAGGTGTGTGCCACCAGGGCTATTTCTTTCCTACTTCTGTCATTAAATTGTAC 42% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000118364.2 |
||
| CDS TCA 90 bp | TCTTTCATCTCTGTTAATGAAAAGGTTTCCTCCAGGAGGAACATTTaGAACCTGGGGTTTGTATCCAGTGTTGAGGTCAGGAATATACAC | + |
|
Preference number: 5 (lower is better) Translates to: SFISVNEKVSSRRNI*NLGFVSSVEVRNIH Trigger: GTGTATATTCCTGACCTCAACACTGGATACAAACCCCAGGTTTCAAATGTTCCTCCTGGAGGAAACCTTTTCATTAACAGAGATGAAAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000118364.2 |
||
| CDS CCA 90 bp | TCTCTGTTAATGAAAAGGTTTCCTCCAGGAGGAACATTTGAAACCTaGGGTTTGTATCCAGTGTTGAGGTCAGGAATATACACAACAGAA | + |
|
Preference number: 5 (lower is better) Translates to: SLLMKRFPPGGTFET*GLYPVLRSGIYTTE Trigger: TTCTGTTGTGTATATTCCTGACCTCAACACTGGATACAAACCCCAGGTTTCAAATGTTCCTCCTGGAGGAAACCTTTTCATTAACAGAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118364.2 |
||
| CDS-3UTR CAA 90 bp | CTTATACTTCTTTTGAGGGAAGTTTTGGCTTGCAGTGGAAAGGCAGCTTCTCACTCTTTTACCAGTTTCTaGACATCGCACTTGAAATAC | + |
|
Preference number: 5 (lower is better) Translates to: LILLLREVLACSGKAASHSFTSF*TSHLKY Trigger: GTATTTCAAGTGCGATGTCAAGAAACTGGTAAAAGA...GTGAGAAGCTGCCTTTCCACTGCAAGCCAAAACTTCCCTCAAAAGAAGTATAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000118364.2 |
||
| CDS-3UTR CAA 90 bp | ACTTATACTTCTTTTGAGGGAAGTTTTGGCTTGCAGTGGAAAGGCAGCTTCTCATCTTTTACCAGTTTCTaGGGAAGTTTGGTGGACAAA | + |
|
Preference number: 5 (lower is better) Translates to: TYTSFEGSFGLQWKGSFSSFTSF*GSLVDK Trigger: TTTGTCCACCAAACTTCCCAAGAAACTGGTAAAAGA...TGAGAAGCTGCCTTTCCACTGCAAGCCAAAACTTCCCTCAAAAGAAGTATAAGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000118364.2 |
||
| CDS-3UTR CAA 90 bp | AGTTCCATCCTGGAGTCATGGCAGTGTACTTATACTTCTTTTGAGGGAAGTTTTGGTTTGTATCCAGTGTaGAGGTCAGGAATATACACA | + |
|
Preference number: 5 (lower is better) Translates to: SSILESWQCTYTSFEGSFGLYPV*RSGIYT Trigger: TGTGTATATTCCTGACCTCAACACTGGATACAAACC...AAAACTTCCCTCAAAAGAAGTATAAGTACACTGCCATGACTCCAGGATGGAACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000118364.2 |
||
| CDS-3UTR CAA 90 bp | TATAGTGAGTTAGTCCTTTTGGGCTTTGTGACCTCCTGTCTCAAGTGGAGATATAGTCTTCATTCCCAATaGCCAAACAGGAGACAAATT | + |
|
Preference number: 5 (lower is better) Translates to: YSELVLLGFVTSCLKWRYSLHSQ*PNRRQI Trigger: AATTTGTCTCCTGTTTGGCAATTGGGAATGAAGACT...ATATCTCCACTTGAGACAGGAGGTCACAAAGCCCAAAAGGACTAACTCACTATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118364.2 |
||
| CDS TCA 90 bp | TCGCACTTGAAATACATACTTGCTGTCTGGCTCCAGGTAGAATTCTaGCTGCTGTACATATGTGAAATTGGCGTCAAATTCTTTAACACT | + |
|
Preference number: 5 (lower is better) Translates to: SHLKYILAVWLQVEF*LLYICEIGVKFFNT Trigger: AGTGTTAAAGAATTTGACGCCAATTTCACATATGTACAGCAGTCAGAATTCTACCTGGAGCCAGACAGCAAGTATGTATTTCAAGTGCGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118364.2 |
||
| CDS-3UTR CAA 90 bp | ACTTATACTTCTTTTGAGGGAAGTTTTGGCTTGCAGTGGAAAGGCAGCTTCTCAGTGCTTAAGGGCTTCTaGGCAATATATAGAAACATT | + |
|
Preference number: 5 (lower is better) Translates to: TYTSFEGSFGLQWKGSFSVLKGF*AIYRNI Trigger: AATGTTTCTATATATTGCCAAGAAGCCCTTAAGCAC...TGAGAAGCTGCCTTTCCACTGCAAGCCAAAACTTCCCTCAAAAGAAGTATAAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000118364.2 |
||
| CDS-3UTR CAA 90 bp | AGTTCCATCCTGGAGTCATGGCAGTGTACTTATACTTCTTTTGAGGGAAGTTTTACAAATCAGTGTCTCTaGAAAATGACCAGGACATTC | + |
|
Preference number: 5 (lower is better) Translates to: SSILESWQCTYTSFEGSFTNQCL*KMTRTF Trigger: GAATGTCCTGGTCATTTTCAAGAGACACTGATTTGT...AAAACTTCCCTCAAAAGAAGTATAAGTACACTGCCATGACTCCAGGATGGAACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000118364.2 |
||
| CDS-3UTR CAA 90 bp | CTGAGCTGTACTGTACAATTTAATGACAGAAGTAGGAAAGAAATAGCCCTGGTGCACTCCACGTTTGGTTaGTTGTTGTTTTGTATCTCA | + |
|
Preference number: 5 (lower is better) Translates to: LSCTVQFNDRSRKEIALVHSTFG*LLFCIS Trigger: TGAGATACAAAACAACAACAAACCAAACGTGGAGTG...CACCAGGGCTATTTCTTTCCTACTTCTGTCATTAAATTGTACAGTACAGCTCAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118364.2 |
||
| CDS-3UTR CAA 90 bp | GTACAATTTAATGACAGAAGTAGGAAAGAAATAGCCCTGGTGGCACACACCTTTTTCTTGACATCGCACTaGAAATACATACTTGCTGTC | + |
|
Preference number: 5 (lower is better) Translates to: VQFNDRSRKEIALVAHTFFLTSH*KYILAV Trigger: GACAGCAAGTATGTATTTCAAGTGCGATGTCAAGAA...AAAGGTGTGTGCCACCAGGGCTATTTCTTTCCTACTTCTGTCATTAAATTGTAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000118364.2 |
||
| CDS-3UTR CAA 90 bp | TATAGTGAGTTAGTCCTTTTGGGCTTTGTGACCTCCTGTCTCAAGTGGAGATATCTTCATAAAGCCACTTaGGGATCATCAGTAAAACTT | + |
|
Preference number: 5 (lower is better) Translates to: YSELVLLGFVTSCLKWRYLHKAT*GSSVKL Trigger: AAGTTTTACTGATGATCCCAAAGTGGCTTTATGAAG...ATATCTCCACTTGAGACAGGAGGTCACAAAGCCCAAAAGGACTAACTCACTATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000118364.2 |
||
| CDS-3UTR CAA 90 bp | AGTTCCATCCTGGAGTCATGGCAGTGTACTTATACTTCTTTTGAGGGAAGTTTTTCCACGTTTGGTTTGTaGTTGTTTTGTATCTCATCT | + |
|
Preference number: 5 (lower is better) Translates to: SSILESWQCTYTSFEGSFSTFGL*LFCISS Trigger: AGATGAGATACAAAACAACAACAAACCAAACGTGGA...AAAACTTCCCTCAAAAGAAGTATAAGTACACTGCCATGACTCCAGGATGGAACT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000118364.2 |
||
| CDS CCA 90 bp | GAAATGGCTTTCCAAAACGTTCTGTGGAAAGTAAGAATTAATAGATaGCAAGTCTTCATTCCCAATTGCCAAACAGGAGACAAATTCATC | + |
|
Preference number: 5 (lower is better) Translates to: EMAFQNVLWKVRINR*QVFIPNCQTGDKFI Trigger: GATGAATTTGTCTCCTGTTTGGCAATTGGGAATGAAGACTTGCCATCTATTAATTCTTACTTTCCACAGAACGTTTTGGAAAGCCATTTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118364.2 |
||
| CDS CCA 72 bp | TCGTGGGATGATTTTGCTGTAACCTGGGAAACTGTCTaGGAAGTTTGGTGGACAAAGGGGGAACTCCAAGGC | + |
|
Preference number: 6 (lower is better) Translates to: SWDDFAVTWETV*EVWWTKGELQG Trigger: GCCTTGGAGTTCCCCCTTTGTCCACCAAACTTCCCAGACAGTTTCCCAGGTTACAGCAAAATCATCCCACGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000118364.2 |
||
| CDS TCA 72 bp | AGACAACAGAGTCTGCGCTGGGATAGTTTCACTGGGTaGGTCACTTTGCAAAACGATGCTGGTTTCCTCCTG | + |
|
Preference number: 6 (lower is better) Translates to: RQQSLRWDSFTG*VTLQNDAGFLL Trigger: CAGGAGGAAACCAGCATCGTTTTGCAAAGTGACTCACCCAGTGAAACTATCCCAGCGCAGACTCTGTTGTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118364.2 |
||
| CDS CCA 72 bp | GGCTGCCAGTTTCTTTTACCAGTTTCTTGGGAAGTTTaGTGGACAAAGGGGGAACTCCAAGGCTGCCAGTTT | + |
|
Preference number: 6 (lower is better) Translates to: GCQFLLPVSWEV*WTKGELQGCQF Trigger: AAACTGGCAGCCTTGGAGTTCCCCCTTTGTCCACCAAACTTCCCAAGAAACTGGTAAAAGAAACTGGCAGCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000118364.2 |
||
| CDS CCA 72 bp | TTTGCTGTAACCTGGGAAACTGTCTGGGAAGTTTGGTaGACAAAGGGGGAACTCCAAGGCTGCCAGTTTCTT | + |
|
Preference number: 6 (lower is better) Translates to: FAVTWETVWEVW*TKGELQGCQFL Trigger: AAGAAACTGGCAGCCTTGGAGTTCCCCCTTTGTCCACCAAACTTCCCAGACAGTTTCCCAGGTTACAGCAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000118364.2 |
||
| CDS CCA 72 bp | GATTTTGCTGTAACCTGGGAAACTGTCTGGGAAGTTTaGTGGACAAAGGGGGAACTCCAAGGCTGCCAGTTT | + |
|
Preference number: 6 (lower is better) Translates to: DFAVTWETVWEV*WTKGELQGCQF Trigger: AAACTGGCAGCCTTGGAGTTCCCCCTTTGTCCACCAAACTTCCCAGACAGTTTCCCAGGTTACAGCAAAATC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000118364.2 |
||
| CDS CAA 72 bp | AGGCTGCCAGTTTCTTTTACCAGTTTCTTGGGAAGTTaGGTGGACAAAGGGGGAACTCCAAGGCTGCCAGTT | + |
|
Preference number: 6 (lower is better) Translates to: RLPVSFTSFLGS*VDKGGTPRLPV Trigger: AACTGGCAGCCTTGGAGTTCCCCCTTTGTCCACCAAACTTCCCAAGAAACTGGTAAAAGAAACTGGCAGCCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000118364.2 |
||
| CDS CAA 90 bp | TCCAGATGGACGTGTAGTTGTTGTGAGTTCTCCATGCCTAGGGAATaGACAGCTTGGACCCATACCAAATACTTCCTGCTGCCTTGCAGT | + |
|
Preference number: 6 (lower is better) Translates to: SRWTCSCCEFSMPRE*TAWTHTKYFLLPCS Trigger: ACTGCAAGGCAGCAGGAAGTATTTGGTATGGGTCCAAGCTGTCAATTCCCTAGGCATGGAGAACTCACAACAACTACACGTCCATCTGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118364.2 |
||
| CDS TCA 72 bp | GCACATAAAGGGCTATCACCACATGCAGCTGAAGTGTaGGGTGACTCATGTCCCAAATGTAGTAGAAGCCTC | + |
|
Preference number: 6 (lower is better) Translates to: AHKGLSPHAAEV*GDSCPKCSRSL Trigger: GAGGCTTCTACTACATTTGGGACATGAGTCACCTCACACTTCAGCTGCATGTGGTGATAGCCCTTTATGTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118364.2 |
||
| CDS TCA 72 bp | TCCAGGTGCATGTCATGTTGCCTGAGTATTCATAAATaGCACATGTCAGATTGCTGGGGGCATCCGGTGGAT | + |
|
Preference number: 6 (lower is better) Translates to: SRCMSCCLSIHK*HMSDCWGHPVD Trigger: ATCCACCGGATGCCCCCAGCAATCTGACATGTGTCATTTATGAATACTCAGGCAACATGACATGCACCTGGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000118364.2 |
||
| CDS TCA 72 bp | CGTGTAGTTGTTGTGAGTTCTCCATGCCTAGGGAATTaGCAGCTTGGACCCATACCAAATACTTCCTGCTGC | + |
|
Preference number: 6 (lower is better) Translates to: RVVVVSSPCLGN*QLGPIPNTSCC Trigger: GCAGCAGGAAGTATTTGGTATGGGTCCAAGCTGTCAATTCCCTAGGCATGGAGAACTCACAACAACTACACG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118364.2 |
||
| CDS CCA 72 bp | TGTTGTGAGTTCTCCATGCCTAGGGAATTGACAGCTTaGACCCATACCAAATACTTCCTGCTGCCTTGCAGT | + |
|
Preference number: 6 (lower is better) Translates to: CCEFSMPRELTA*THTKYFLLPCS Trigger: ACTGCAAGGCAGCAGGAAGTATTTGGTATGGGTCCAAGCTGTCAATTCCCTAGGCATGGAGAACTCACAACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118364.2 |
||
| CDS CAA 90 bp | GACAAAGGGGGAACTCCAAGGCTGCCAGTTTCTTTTACCAGTTTCTaGACATCGCACTTGAAATACATACTTGCTGTCTGGCTCCAGGTA | + |
|
Preference number: 6 (lower is better) Translates to: DKGGTPRLPVSFTSF*TSHLKYILAVWLQV Trigger: TACCTGGAGCCAGACAGCAAGTATGTATTTCAAGTGCGATGTCAAGAAACTGGTAAAAGAAACTGGCAGCCTTGGAGTTCCCCCTTTGTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000118364.2 |
||
| CDS CCA 72 bp | ATAAATGACACATGTCAGATTGCTGGGGGCATCCGGTaGATGTCCAGAGGAAATGTCTTTCCCACAAATCAG | + |
|
Preference number: 6 (lower is better) Translates to: INDTCQIAGGIR*MSRGNVFPTNQ Trigger: CTGATTTGTGGGAAAGACATTTCCTCTGGACATCCACCGGATGCCCCCAGCAATCTGACATGTGTCATTTAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000118364.2 |
||
| CDS CAA 90 bp | CGGTGGATGTCCAGAGGAAATGTCTTTCCCACAAATCAGTGTCTCTaGAAAATGACCAGGACATTCAGCAGTGCAATGCATATAGGCATG | + |
|
Preference number: 6 (lower is better) Translates to: RWMSRGNVFPTNQCL*KMTRTFSSAMHIGM Trigger: CATGCCTATATGCATTGCACTGCTGAATGTCCTGGTCATTTTCAAGAGACACTGATTTGTGGGAAAGACATTTCCTCTGGACATCCACCG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118364.2 |
||
| CDS CCA 72 bp | ATGATGGACGCAGAAGGTATCACTATATCATCCAGATaGACGTGTAGTTGTTGTGAGTTCTCCATGCCTAGG | + |
|
Preference number: 6 (lower is better) Translates to: MMDAEGITISSR*TCSCCEFSMPR Trigger: CCTAGGCATGGAGAACTCACAACAACTACACGTCCATCTGGATGATATAGTGATACCTTCTGCGTCCATCAT 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118364.2 |
||
| CDS TCA 72 bp | CATTCCCGACAAAAGTCCAATGTCTTGATGATTACCTaGAGCAGGATGTCCTCTGAAGATTGTAGCACTGAG | + |
|
Preference number: 6 (lower is better) Translates to: HSRQKSNVLMIT*SRMSSEDCSTE Trigger: CTCAGTGCTACAATCTTCAGAGGACATCCTGCTTCAGGTAATCATCAAGACATTGGACTTTTGTCGGGAATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118364.2 |
||
| CDS GCA 72 bp | TCAGTGTCTCTTGAAAATGACCAGGACATTCAGCAGTaGAATGCATATAGGCATGAGGTTCCGAAAAGCCTT | + |
|
Preference number: 6 (lower is better) Translates to: SVSLENDQDIQQ*NAYRHEVPKSL Trigger: AAGGCTTTTCGGAACCTCATGCCTATATGCATTGCACTGCTGAATGTCCTGGTCATTTTCAAGAGACACTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000118364.2 |
||
| CDS CCA 72 bp | ATGAAAAGGTTTCCTCCAGGAGGAACATTTGAAACCTaGGGTTTGTATCCAGTGTTGAGGTCAGGAATATAC | + |
|
Preference number: 6 (lower is better) Translates to: MKRFPPGGTFET*GLYPVLRSGIY Trigger: GTATATTCCTGACCTCAACACTGGATACAAACCCCAGGTTTCAAATGTTCCTCCTGGAGGAAACCTTTTCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118364.2 |
||
| CDS CAA 72 bp | CTGCCAGTTTCTTTTACCAGTTTCTTGACATCGCACTaGAAATACATACTTGCTGTCTGGCTCCAGGTAGAA | + |
|
Preference number: 6 (lower is better) Translates to: LPVSFTSFLTSH*KYILAVWLQVE Trigger: TTCTACCTGGAGCCAGACAGCAAGTATGTATTTCAAGTGCGATGTCAAGAAACTGGTAAAAGAAACTGGCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118364.2 |
||
| CDS CAA 72 bp | GGAGGAACATTTGAAACCTGGGGTTTGTATCCAGTGTaGAGGTCAGGAATATACACAACAGAAGAACTGGTA | + |
|
Preference number: 6 (lower is better) Translates to: GGTFETWGLYPV*RSGIYTTEELV Trigger: TACCAGTTCTTCTGTTGTGTATATTCCTGACCTCAACACTGGATACAAACCCCAGGTTTCAAATGTTCCTCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118364.2 |
||
| CDS CAA 90 bp | TTTCCTCCAGGAGGAACATTTGAAACCTGGGGTTTGTATCCAGTGTaGAGGTCAGGAATATACACAACAGAAGAACTGGTAGACAACATT | + |
|
Preference number: 6 (lower is better) Translates to: FPPGGTFETWGLYPV*RSGIYTTEELVDNI Trigger: AATGTTGTCTACCAGTTCTTCTGTTGTGTATATTCCTGACCTCAACACTGGATACAAACCCCAGGTTTCAAATGTTCCTCCTGGAGGAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118364.2 |
||
| CDS CAA 72 bp | GTAAAGATTCCTTGGTCGGCAGTGCTTAAGGGCTTCTaGGCAATATATAGAAACATTCATGCCCATCTGAAA | + |
|
Preference number: 6 (lower is better) Translates to: VKIPWSAVLKGF*AIYRNIHAHLK Trigger: TTTCAGATGGGCATGAATGTTTCTATATATTGCCAAGAAGCCCTTAAGCACTGCCGACCAAGGAATCTTTAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118364.2 |
||
| CDS CAA 90 bp | TTAATGAAAAGGTTTCCTCCAGGAGGAACATTTGAAACCTGGGGTTaGTATCCAGTGTTGAGGTCAGGAATATACACAACAGAAGAACTG | + |
|
Preference number: 6 (lower is better) Translates to: LMKRFPPGGTFETWG*YPVLRSGIYTTEEL Trigger: CAGTTCTTCTGTTGTGTATATTCCTGACCTCAACACTGGATACAAACCCCAGGTTTCAAATGTTCCTCCTGGAGGAAACCTTTTCATTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000118364.2 |
||
| CDS TCA 72 bp | AAATACATACTTGCTGTCTGGCTCCAGGTAGAATTCTaGCTGCTGTACATATGTGAAATTGGCGTCAAATTC | + |
|
Preference number: 6 (lower is better) Translates to: KYILAVWLQVEF*LLYICEIGVKF Trigger: GAATTTGACGCCAATTTCACATATGTACAGCAGTCAGAATTCTACCTGGAGCCAGACAGCAAGTATGTATTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118364.2 |
||
| CDS CCA 72 bp | TTAGTAAAGCCATACTTGAAGCAGAAAATTGGAAGTTaGGATATGTTTTCAATCTGGCAAAGTGGTCATCTG | + |
|
Preference number: 6 (lower is better) Translates to: LVKPYLKQKIGS*DMFSIWQSGHL Trigger: CAGATGACCACTTTGCCAGATTGAAAACATATCCCAACTTCCAATTTTCTGCTTCAAGTATGGCTTTACTAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000118364.2 |
||