Pregenerated sensors for IL23A (Mus musculus)
Ensembl gene IDs: ENSMUSG00000025383Ensembl transcript IDs: ENSMUST00000026449.3
Found 50 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TTTCTCGATGCCACCGCCCCCTTCCCCTCAGGCCACGCAGCTGCTTaGCCGCTTCCAAGGCCAAGGGCTCGAGACTTTATTCTTCTTCTC | + |
|
Preference number: 1 (lower is better) Translates to: FLDATAPFPSGHAAA*PLPRPRARDFILLL Trigger: GAGAAGAAGAATAAAGTCTCGAGCCCTTGGCCTTGGAAGCGGGCAAGCAGCTGCGTGGCCTGAGGGGAAGGGGGCGGTGGCATCGAGAAA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026449.3 |
||
| 3UTR GCA 90 bp | ACAGTTTCTCGATGCCACCGCCCCCTTCCCCTCAGGCCACGCAGCTaGTTGCCCGCTTCCAAGGCCAAGGGCTCGAGACTTTATTCTTCT | + |
|
Preference number: 1 (lower is better) Translates to: TVSRCHRPLPLRPRS*LPASKAKGSRLYSS Trigger: AGAAGAATAAAGTCTCGAGCCCTTGGCCTTGGAAGCGGGCAAGCAGCTGCGTGGCCTGAGGGGAAGGGGGCGGTGGCATCGAGAAACTGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026449.3 |
||
| 3UTR CCA 90 bp | CTGTTAGAACTGAGGGACAGAGCAGGCAGGTACAGAGCTGCTGTCTaGAGTACTGTGCATCTGCACATTTCCCTGAGCCACCCAGGAAAG | + |
|
Preference number: 1 (lower is better) Translates to: LLELRDRAGRYRAAV*STVHLHISLSHPGK Trigger: CTTTCCTGGGTGGCTCAGGGAAATGTGCAGATGCACAGTACTCCAGACAGCAGCTCTGTACCTGCCTGCTCTGTCCCTCAGTTCTAACAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026449.3 |
||
| 3UTR GCA 90 bp | CTAGATTCTGTTAGAACTGAGGGACAGAGCAGGCAGGTACAGAGCTaGTGTCTGGAGTACTGTGCATCTGCACATTTCCCTGAGCCACCC | + |
|
Preference number: 1 (lower is better) Translates to: LDSVRTEGQSRQVQS*CLEYCASAHFPEPP Trigger: GGGTGGCTCAGGGAAATGTGCAGATGCACAGTACTCCAGACAGCAGCTCTGTACCTGCCTGCTCTGTCCCTCAGTTCTAACAGAATCTAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026449.3 |
||
| 3UTR-3UTR GCA 90 bp | GCCACCGCCCCCTTCCCCTCAGGCCACGCAGCTGCTTGCCCGCTTCCAAGGCCACTTTCTCTAGCCAGCTaGCTGCTCTGGGGTTTGTTT | + |
|
Preference number: 2 (lower is better) Translates to: ATAPFPSGHAAACPLPRPLSLAS*LLWGLF Trigger: AAACAAACCCCAGAGCAGGCAGCTGGCTAGAGAAAG...TGGCCTTGGAAGCGGGCAAGCAGCTGCGTGGCCTGAGGGGAAGGGGGCGGTGGC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000026449.3 |
||
| 3UTR CAA 90 bp | GTTTCTCGATGCCACCGCCCCCTTCCCCTCAGGCCACGCAGCTGCTaGCCCGCTTCCAAGGCCAAGGGCTCGAGACTTTATTCTTCTTCT | + |
|
Preference number: 2 (lower is better) Translates to: VSRCHRPLPLRPRSC*PASKAKGSRLYSSS Trigger: AGAAGAAGAATAAAGTCTCGAGCCCTTGGCCTTGGAAGCGGGCAAGCAGCTGCGTGGCCTGAGGGGAAGGGGGCGGTGGCATCGAGAAAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026449.3 |
||
| 3UTR-3UTR TCA 90 bp | AGCTTTGTCACAGGTCATAGTGGTAGTATTTGTCAGTTCGTATTGGTAGTCCTGTGGGCTCACTTTTTCTaGTGCTCTGGGTTTTCTCAC | + |
|
Preference number: 2 (lower is better) Translates to: SFVTGHSGSICQFVLVVLWAHFF*CSGFSH Trigger: GTGAGAAAACCCAGAGCATCAGAAAAAGTGAGCCCA...CAGGACTACCAATACGAACTGACAAATACTACCACTATGACCTGTGACAAAGCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026449.3 |
||
| 3UTR-3UTR CCA 90 bp | TTTGTCACAGGTCATAGTGGTAGTATTTGTCAGTTCGTATTGGTAGTCCTGTTACTTTTTCTGATGCTCTaGGTTTTCTCACAGTTTCTC | + |
|
Preference number: 2 (lower is better) Translates to: FVTGHSGSICQFVLVVLLLFLML*VFSQFL Trigger: GAGAAACTGTGAGAAAACCCAGAGCATCAGAAAAAG...TAACAGGACTACCAATACGAACTGACAAATACTACCACTATGACCTGTGACAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026449.3 |
||
| 3UTR GCA 72 bp | CGATGCCACCGCCCCCTTCCCCTCAGGCCACGCAGCTaGTTGCCCGCTTCCAAGGCCAAGGGCTCGAGACTT | + |
|
Preference number: 3 (lower is better) Translates to: RCHRPLPLRPRS*LPASKAKGSRL Trigger: AAGTCTCGAGCCCTTGGCCTTGGAAGCGGGCAAGCAGCTGCGTGGCCTGAGGGGAAGGGGGCGGTGGCATCG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026449.3 |
||
| 3UTR GCA 72 bp | GCCACCGCCCCCTTCCCCTCAGGCCACGCAGCTGCTTaGCCGCTTCCAAGGCCAAGGGCTCGAGACTTTATT | + |
|
Preference number: 3 (lower is better) Translates to: ATAPFPSGHAAA*PLPRPRARDFI Trigger: AATAAAGTCTCGAGCCCTTGGCCTTGGAAGCGGGCAAGCAGCTGCGTGGCCTGAGGGGAAGGGGGCGGTGGC 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026449.3 |
||
| 3UTR TCA 72 bp | TTACAGATAATGGCCAAAGCCTGGGCTCACTTTTTCTaGTGCTCTGGGTTTTCTCACAGTTTCTCGATGCCA | + |
|
Preference number: 3 (lower is better) Translates to: LQIMAKAWAHFF*CSGFSHSFSMP Trigger: TGGCATCGAGAAACTGTGAGAAAACCCAGAGCATCAGAAAAAGTGAGCCCAGGCTTTGGCCATTATCTGTAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026449.3 |
||
| CDS-3UTR CCA 90 bp | GCCACCGCCCCCTTCCCCTCAGGCCACGCAGCTGCTTGCCCGCTTCCAAGGCCAAGAGTTGCTGCTCCGTaGGCAAAGACCCGGGCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: ATAPFPSGHAAACPLPRPRVAAP*AKTRAA Trigger: AGCTGCCCGGGTCTTTGCCCACGGAGCAGCAACTCT...TGGCCTTGGAAGCGGGCAAGCAGCTGCGTGGCCTGAGGGGAAGGGGGCGGTGGC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026449.3 |
||
| 3UTR CAA 72 bp | TGCCACCGCCCCCTTCCCCTCAGGCCACGCAGCTGCTaGCCCGCTTCCAAGGCCAAGGGCTCGAGACTTTAT | + |
|
Preference number: 4 (lower is better) Translates to: CHRPLPLRPRSC*PASKAKGSRLY Trigger: ATAAAGTCTCGAGCCCTTGGCCTTGGAAGCGGGCAAGCAGCTGCGTGGCCTGAGGGGAAGGGGGCGGTGGCA 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026449.3 |
||
| CDS-3UTR CCA 90 bp | ATGCCACCGCCCCCTTCCCCTCAGGCCACGCAGCTGCTTGCCCGCTTCCAAGGCTGTGAAGTTGCTCCATaGGGCTATCAGGGAGTAGAG | + |
|
Preference number: 4 (lower is better) Translates to: MPPPPSPQATQLLARFQGCEVAP*GYQGVE Trigger: CTCTACTCCCTGATAGCCCCATGGAGCAACTTCACA...GCCTTGGAAGCGGGCAAGCAGCTGCGTGGCCTGAGGGGAAGGGGGCGGTGGCAT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026449.3 |
||
| CDS-3UTR CCA 90 bp | ATGCCACCGCCCCCTTCCCCTCAGGCCACGCAGCTGCTTGCCCGCTTCCAAGGCCTTTGCAAGCAGAACTaGCTGTTGTCCTTGAGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: MPPPPSPQATQLLARFQGLCKQN*LLSLSP Trigger: AGGACTCAAGGACAACAGCCAGTTCTGCTTGCAAAG...GCCTTGGAAGCGGGCAAGCAGCTGCGTGGCCTGAGGGGAAGGGGGCGGTGGCAT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026449.3 |
||
| CDS-3UTR CCA 90 bp | ACGCAGCTGCTTGCCCGCTTCCAAGGCCAAGGGCTCGAGACTTTATTCTTCTTCCCGGGGGTGATCCTCTaGCTGGAGGAGTTGGCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: TQLLARFQGQGLETLFFFPGVIL*LEELAE Trigger: CTCAGCCAACTCCTCCAGCCAGAGGATCACCCCCGG...GAAGAAGAATAAAGTCTCGAGCCCTTGGCCTTGGAAGCGGGCAAGCAGCTGCGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026449.3 |
||
| CDS-3UTR TCA 90 bp | CCAAAGCCTGGGCTCACTTTTTCTGATGCTCTGGGTTTTCTCACAGTTTCTCGATGGGTCTCCCGGGGGTaGTCCTCTGGCTGGAGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: PKPGLTFSDALGFLTVSRWVSRG*SSGWRS Trigger: ACTCCTCCAGCCAGAGGATCACCCCCGGGAGACCCA...TCGAGAAACTGTGAGAAAACCCAGAGCATCAGAAAAAGTGAGCCCAGGCTTTGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000026449.3 |
||
| CDS-3UTR CCA 90 bp | ACGCAGCTGCTTGCCCGCTTCCAAGGCCAAGGGCTCGAGACTTTATTCTTCTTCTCTGGCTGGAGGAGTTaGCTGAGTCCTAGTAGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: TQLLARFQGQGLETLFFFSGWRS*LSPSRE Trigger: CTCCCTACTAGGACTCAGCCAACTCCTCCAGCCAGA...GAAGAAGAATAAAGTCTCGAGCCCTTGGCCTTGGAAGCGGGCAAGCAGCTGCGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026449.3 |
||
| CDS-3UTR CCA 90 bp | CTGCACATTTCCCTGAGCCACCCAGGAAAGTATAATGTTCCCCTTTTCTTGTTTAGACCCGGGCAGCTATaGCCAAAAAGGCCTGGAGGC | + |
|
Preference number: 4 (lower is better) Translates to: LHISLSHPGKYNVPLFLFRPGQL*PKRPGG Trigger: GCCTCCAGGCCTTTTTGGCCATAGCTGCCCGGGTCT...AAACAAGAAAAGGGGAACATTATACTTTCCTGGGTGGCTCAGGGAAATGTGCAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000026449.3 |
||
| CDS-3UTR TCA 90 bp | GTGCATCTGCACATTTCCCTGAGCCACCCAGGAAAGTATAATGTTCCCCTTTTCACTGGCTGTTGTCCTTaGGTCCTTGTGGGTCACAAC | + |
|
Preference number: 4 (lower is better) Translates to: VHLHISLSHPGKYNVPLFTGCCP*VLVGHN Trigger: GTTGTGACCCACAAGGACTCAAGGACAACAGCCAGT...GAAAAGGGGAACATTATACTTTCCTGGGTGGCTCAGGGAAATGTGCAGATGCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026449.3 |
||
| CDS-3UTR GCA 90 bp | CTGCACATTTCCCTGAGCCACCCAGGAAAGTATAATGTTCCCCTTTTCTTGTTTCTCAGTCAGAGTTGCTaGTCCGTGGGCAAAGACCCG | + |
|
Preference number: 4 (lower is better) Translates to: LHISLSHPGKYNVPLFLFLSQSC*SVGKDP Trigger: CGGGTCTTTGCCCACGGAGCAGCAACTCTGACTGAG...AAACAAGAAAAGGGGAACATTATACTTTCCTGGGTGGCTCAGGGAAATGTGCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026449.3 |
||
| CDS-3UTR TCA 90 bp | TTTCTTGTTTTTCTTACAGATAATGGCCAAAGCCTGGGCTCACTTTTTCTGATGCAGCCAGGCCCTGAGTaGCCCAGGGCAACAGCCATA | + |
|
Preference number: 4 (lower is better) Translates to: FLVFLTDNGQSLGSLFLMQPGPE*PRATAI Trigger: TATGGCTGTTGCCCTGGGTCACTCAGGGCCTGGCTG...CATCAGAAAAAGTGAGCCCAGGCTTTGGCCATTATCTGTAAGAAAAACAAGAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000026449.3 |
||
| CDS-3UTR TCA 90 bp | AGCTTTGTCACAGGTCATAGTGGTAGTATTTGTCAGTTCGTATTGGTAGTCCTGGCTGGAGGAGTTGGCTaGGTCCTAGTAGGGAGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: SFVTGHSGSICQFVLVVLAGGVG*VLVGRC Trigger: ACACCTCCCTACTAGGACTCAGCCAACTCCTCCAGC...CAGGACTACCAATACGAACTGACAAATACTACCACTATGACCTGTGACAAAGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026449.3 |
||
| CDS-3UTR CCA 90 bp | GTGCATCTGCACATTTCCCTGAGCCACCCAGGAAAGTATAATGTTCCCCTTTTCGTCCTTGAGTCCTTGTaGGTCACAACCATCTTCACA | + |
|
Preference number: 4 (lower is better) Translates to: VHLHISLSHPGKYNVPLFVLESL*VTTIFT Trigger: TGTGAAGATGGTTGTGACCCACAAGGACTCAAGGAC...GAAAAGGGGAACATTATACTTTCCTGGGTGGCTCAGGGAAATGTGCAGATGCAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026449.3 |
||
| CDS-3UTR TCA 90 bp | AGCTTTGTCACAGGTCATAGTGGTAGTATTTGTCAGTTCGTATTGGTAGTCCTGGAGCAGGCTCCCCTTTaGAGATGTCAGAGTCAAGCA | + |
|
Preference number: 4 (lower is better) Translates to: SFVTGHSGSICQFVLVVLEQAPL*RCQSQA Trigger: TGCTTGACTCTGACATCTTCAAAGGGGAGCCTGCTC...CAGGACTACCAATACGAACTGACAAATACTACCACTATGACCTGTGACAAAGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026449.3 |
||
| CDS CCA 90 bp | GCTGCTCCGTGGGCAAAGACCCGGGCAGCTATGGCCAAAAAGGCCTaGAGGCTTCGAAGGATCTTGGAACGGAGAAGGGGGCGCTGCCAC | + |
|
Preference number: 5 (lower is better) Translates to: AAPWAKTRAAMAKKA*RLRRILERRRGRCH Trigger: GTGGCAGCGCCCCCTTCTCCGTTCCAAGATCCTTCGAAGCCTCCAGGCCTTTTTGGCCATAGCTGCCCGGGTCTTTGCCCACGGAGCAGC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000026449.3 |
||
| CDS-3UTR CAA 90 bp | ATGCCACCGCCCCCTTCCCCTCAGGCCACGCAGCTGCTTGCCCGCTTCCAAGGCAAGCAGAACTGGCTGTaGTCCTTGAGTCCTTGTGGG | + |
|
Preference number: 5 (lower is better) Translates to: MPPPPSPQATQLLARFQGKQNWL*SLSPCG Trigger: CCCACAAGGACTCAAGGACAACAGCCAGTTCTGCTT...GCCTTGGAAGCGGGCAAGCAGCTGCGTGGCCTGAGGGGAAGGGGGCGGTGGCAT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026449.3 |
||
| CDS TCA 90 bp | TCTGTTGGGTCTCCCGGGGGTGATCCTCTGGCTGGAGGAGTTGGCTaGGTCCTAGTAGGGAGGTGTGAAGTTGCTCCATGGGGCTATCAG | + |
|
Preference number: 5 (lower is better) Translates to: SVGSPGGDPLAGGVG*VLVGRCEVAPWGYQ Trigger: CTGATAGCCCCATGGAGCAACTTCACACCTCCCTACTAGGACTCAGCCAACTCCTCCAGCCAGAGGATCACCCCCGGGAGACCCAACAGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026449.3 |
||
| CDS GCA 90 bp | GTAGATTCATATGTCCCGCTGGTGCATGTGCGTTCCAGGCTAGCATaGAGAGATTCCGAGAGAGCTGCTGGCACTGAGCCCAGTCAGGAC | + |
|
Preference number: 5 (lower is better) Translates to: VDSYVPLVHVRSRLA*RDSERAAGTEPSQD Trigger: GTCCTGACTGGGCTCAGTGCCAGCAGCTCTCTCGGAATCTCTGCATGCTAGCCTGGAACGCACATGCACCAGCGGGACATATGAATCTAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026449.3 |
||
| CDS-3UTR CAA 90 bp | CCACGCAGCTGCTTGCCCGCTTCCAAGGCCAAGGGCTCGAGACTTTATTCTTCTAGAGCAGGCTCCCCTTaGAAGATGTCAGAGTCAAGC | + |
|
Preference number: 5 (lower is better) Translates to: PRSCLPASKAKGSRLYSSRAGSP*KMSESS Trigger: GCTTGACTCTGACATCTTCAAAGGGGAGCCTGCTCT...AGAAGAATAAAGTCTCGAGCCCTTGGCCTTGGAAGCGGGCAAGCAGCTGCGTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026449.3 |
||
| CDS-3UTR CAA 90 bp | GTGCATCTGCACATTTCCCTGAGCCACCCAGGAAAGTATAATGTTCCCCTTTTCCAGGCTGGGCATCTGTaGGGTCTCCCGGGGGTGATC | + |
|
Preference number: 5 (lower is better) Translates to: VHLHISLSHPGKYNVPLFQAGHL*GLPGVI Trigger: GATCACCCCCGGGAGACCCAACAGATGCCCAGCCTG...GAAAAGGGGAACATTATACTTTCCTGGGTGGCTCAGGGAAATGTGCAGATGCAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000026449.3 |
||
| CDS-3UTR CAA 90 bp | GCAGCTGCTTGCCCGCTTCCAAGGCCAAGGGCTCGAGACTTTATTCTTCTTCTCATAAAAAGCCAGACCTaGGCGGATCCTTTGCAAGCA | + |
|
Preference number: 5 (lower is better) Translates to: AAACPLPRPRARDFILLLIKSQT*ADPLQA Trigger: TGCTTGCAAAGGATCCGCCAAGGTCTGGCTTTTTAT...GAGAAGAAGAATAAAGTCTCGAGCCCTTGGCCTTGGAAGCGGGCAAGCAGCTGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026449.3 |
||
| CDS CCA 90 bp | GCGGATCCTTTGCAAGCAGAACTGGCTGTTGTCCTTGAGTCCTTGTaGGTCACAACCATCTTCACACTGGATACGGGGCACATTATTTTT | + |
|
Preference number: 5 (lower is better) Translates to: ADPLQAELAVVLESL*VTTIFTLDTGHIIF Trigger: AAAAATAATGTGCCCCGTATCCAGTGTGAAGATGGTTGTGACCCACAAGGACTCAAGGACAACAGCCAGTTCTGCTTGCAAAGGATCCGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026449.3 |
||
| CDS CCA 90 bp | TGGCTGTTGTCCTTGAGTCCTTGTGGGTCACAACCATCTTCACACTaGATACGGGGCACATTATTTTTAGTCTCTTCATCCTCTTCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: WLLSLSPCGSQPSSH*IRGTLFLVSSSSSS Trigger: AGAAGAAGAGGATGAAGAGACTAAAAATAATGTGCCCCGTATCCAGTGTGAAGATGGTTGTGACCCACAAGGACTCAAGGACAACAGCCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026449.3 |
||
| CDS-3UTR CAA 90 bp | TTTCTTGTTTTTCTTACAGATAATGGCCAAAGCCTGGGCTCACTTTTTCTGATGACCTTGGCGGATCCTTaGCAAGCAGAACTGGCTGTT | + |
|
Preference number: 5 (lower is better) Translates to: FLVFLTDNGQSLGSLFLMTLADP*QAELAV Trigger: AACAGCCAGTTCTGCTTGCAAAGGATCCGCCAAGGT...CATCAGAAAAAGTGAGCCCAGGCTTTGGCCATTATCTGTAAGAAAAACAAGAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000026449.3 |
||
| CDS TCA 72 bp | GAACTCAGGCTGGGCATCTGTTGGGTCTCCCGGGGGTaGTCCTCTGGCTGGAGGAGTTGGCTGAGTCCTAGT | + |
|
Preference number: 6 (lower is better) Translates to: ELRLGICWVSRG*SSGWRSWLSPS Trigger: ACTAGGACTCAGCCAACTCCTCCAGCCAGAGGATCACCCCCGGGAGACCCAACAGATGCCCAGCCTGAGTTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026449.3 |
||
| CDS CCA 72 bp | TGGGCAAAGACCCGGGCAGCTATGGCCAAAAAGGCCTaGAGGCTTCGAAGGATCTTGGAACGGAGAAGGGGG | + |
|
Preference number: 6 (lower is better) Translates to: WAKTRAAMAKKA*RLRRILERRRG Trigger: CCCCCTTCTCCGTTCCAAGATCCTTCGAAGCCTCCAGGCCTTTTTGGCCATAGCTGCCCGGGTCTTTGCCCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026449.3 |
||
| CDS CCA 72 bp | GTTGGCACTAAGGGCTCAGTCAGAGTTGCTGCTCCGTaGGCAAAGACCCGGGCAGCTATGGCCAAAAAGGCC | + |
|
Preference number: 6 (lower is better) Translates to: VGTKGSVRVAAP*AKTRAAMAKKA Trigger: GGCCTTTTTGGCCATAGCTGCCCGGGTCTTTGCCCACGGAGCAGCAACTCTGACTGAGCCCTTAGTGCCAAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026449.3 |
||
| CDS TCA 72 bp | GGCGGATCCTTTGCAAGCAGAACTGGCTGTTGTCCTTaGGTCCTTGTGGGTCACAACCATCTTCACACTGGA | + |
|
Preference number: 6 (lower is better) Translates to: GGSFASRTGCCP*VLVGHNHLHTG Trigger: TCCAGTGTGAAGATGGTTGTGACCCACAAGGACTCAAGGACAACAGCCAGTTCTGCTTGCAAAGGATCCGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026449.3 |
||
| CDS CCA 72 bp | TTGCAAGCAGAACTGGCTGTTGTCCTTGAGTCCTTGTaGGTCACAACCATCTTCACACTGGATACGGGGCAC | + |
|
Preference number: 6 (lower is better) Translates to: LQAELAVVLESL*VTTIFTLDTGH Trigger: GTGCCCCGTATCCAGTGTGAAGATGGTTGTGACCCACAAGGACTCAAGGACAACAGCCAGTTCTGCTTGCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026449.3 |
||
| CDS CCA 72 bp | AAAGCCAGACCTTGGCGGATCCTTTGCAAGCAGAACTaGCTGTTGTCCTTGAGTCCTTGTGGGTCACAACCA | + |
|
Preference number: 6 (lower is better) Translates to: KARPWRILCKQN*LLSLSPCGSQP Trigger: TGGTTGTGACCCACAAGGACTCAAGGACAACAGCCAGTTCTGCTTGCAAAGGATCCGCCAAGGTCTGGCTTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026449.3 |
||
| CDS CAA 72 bp | CCTTTGCAAGCAGAACTGGCTGTTGTCCTTGAGTCCTaGTGGGTCACAACCATCTTCACACTGGATACGGGG | + |
|
Preference number: 6 (lower is better) Translates to: PLQAELAVVLES*WVTTIFTLDTG Trigger: CCCCGTATCCAGTGTGAAGATGGTTGTGACCCACAAGGACTCAAGGACAACAGCCAGTTCTGCTTGCAAAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026449.3 |
||
| CDS CAA 72 bp | TGGCGGATCCTTTGCAAGCAGAACTGGCTGTTGTCCTaGAGTCCTTGTGGGTCACAACCATCTTCACACTGG | + |
|
Preference number: 6 (lower is better) Translates to: WRILCKQNWLLS*SPCGSQPSSHW Trigger: CCAGTGTGAAGATGGTTGTGACCCACAAGGACTCAAGGACAACAGCCAGTTCTGCTTGCAAAGGATCCGCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026449.3 |
||
| CDS CAA 72 bp | AGACCTTGGCGGATCCTTTGCAAGCAGAACTGGCTGTaGTCCTTGAGTCCTTGTGGGTCACAACCATCTTCA | + |
|
Preference number: 6 (lower is better) Translates to: RPWRILCKQNWL*SLSPCGSQPSS Trigger: TGAAGATGGTTGTGACCCACAAGGACTCAAGGACAACAGCCAGTTCTGCTTGCAAAGGATCCGCCAAGGTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026449.3 |
||
| CDS CAA 90 bp | TTGGCGGATCCTTTGCAAGCAGAACTGGCTGTTGTCCTTGAGTCCTaGTGGGTCACAACCATCTTCACACTGGATACGGGGCACATTATT | + |
|
Preference number: 6 (lower is better) Translates to: LADPLQAELAVVLES*WVTTIFTLDTGHII Trigger: AATAATGTGCCCCGTATCCAGTGTGAAGATGGTTGTGACCCACAAGGACTCAAGGACAACAGCCAGTTCTGCTTGCAAAGGATCCGCCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026449.3 |
||
| CDS CAA 90 bp | AGAGTCAAGCAGGTGCTTATAAAAAGCCAGACCTTGGCGGATCCTTaGCAAGCAGAACTGGCTGTTGTCCTTGAGTCCTTGTGGGTCACA | + |
|
Preference number: 6 (lower is better) Translates to: RVKQVLIKSQTLADP*QAELAVVLESLWVT Trigger: TGTGACCCACAAGGACTCAAGGACAACAGCCAGTTCTGCTTGCAAAGGATCCGCCAAGGTCTGGCTTTTTATAAGCACCTGCTTGACTCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026449.3 |
||
| CDS CAA 72 bp | CAGGTGCTTATAAAAAGCCAGACCTTGGCGGATCCTTaGCAAGCAGAACTGGCTGTTGTCCTTGAGTCCTTG | + |
|
Preference number: 6 (lower is better) Translates to: QVLIKSQTLADP*QAELAVVLESL Trigger: CAAGGACTCAAGGACAACAGCCAGTTCTGCTTGCAAAGGATCCGCCAAGGTCTGGCTTTTTATAAGCACCTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026449.3 |
||
| CDS CAA 72 bp | GTCAGAGTCAAGCAGGTGCTTATAAAAAGCCAGACCTaGGCGGATCCTTTGCAAGCAGAACTGGCTGTTGTC | + |
|
Preference number: 6 (lower is better) Translates to: VRVKQVLIKSQT*ADPLQAELAVV Trigger: GACAACAGCCAGTTCTGCTTGCAAAGGATCCGCCAAGGTCTGGCTTTTTATAAGCACCTGCTTGACTCTGAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026449.3 |
||
| CDS CAA 90 bp | TTTGAAGATGTCAGAGTCAAGCAGGTGCTTATAAAAAGCCAGACCTaGGCGGATCCTTTGCAAGCAGAACTGGCTGTTGTCCTTGAGTCC | + |
|
Preference number: 6 (lower is better) Translates to: FEDVRVKQVLIKSQT*ADPLQAELAVVLES Trigger: GGACTCAAGGACAACAGCCAGTTCTGCTTGCAAAGGATCCGCCAAGGTCTGGCTTTTTATAAGCACCTGCTTGACTCTGACATCTTCAAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026449.3 |
||
| CDS CCA 72 bp | TCCTTGAGTCCTTGTGGGTCACAACCATCTTCACACTaGATACGGGGCACATTATTTTTAGTCTCTTCATCC | + |
|
Preference number: 6 (lower is better) Translates to: SLSPCGSQPSSH*IRGTLFLVSSS Trigger: GGATGAAGAGACTAAAAATAATGTGCCCCGTATCCAGTGTGAAGATGGTTGTGACCCACAAGGACTCAAGGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026449.3 |
||