Pregenerated sensors for IL22RA2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000039760Ensembl transcript IDs: ENSMUST00000036564.8
Found 58 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
---|---|---|
3UTR TCA 90 bp | CTGGAACTCTCTATGCAGACCAGGTTGGCCCAAAAGTCAGAGATCTaGCTGATTCTGCCTTTCAATGCTGGGATTAAAGATGTGCCTTAC | + |
Preference number: 1 (lower is better) Translates to: LELSMQTRLAQKSEI*LILPFNAGIKDVPY Trigger: GTAAGGCACATCTTTAATCCCAGCATTGAAAGGCAGAATCAGTCAGATCTCTGACTTTTGGGCCAACCTGGTCTGCATAGAGAGTTCCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036564.8 |
||
3UTR TCA 90 bp | CCAACTCTCATTCTGTGGACAGAGAGGCCACTTTGCCTGAATGGCTaGGTTATCACTGTGGCTTATATGTTTCTTCTGTCTTTGCTGCTG | + |
Preference number: 1 (lower is better) Translates to: PTLILWTERPLCLNG*VITVAYMFLLSLLL Trigger: CAGCAGCAAAGACAGAAGAAACATATAAGCCACAGTGATAACTCAGCCATTCAGGCAAAGTGGCCTCTCTGTCCACAGAATGAGAGTTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036564.8 |
||
3UTR TCA 90 bp | TCTCCAGCCCAACTCTCATTCTGTGGACAGAGAGGCCACTTTGCCTaGATGGCTGAGTTATCACTGTGGCTTATATGTTTCTTCTGTCTT | + |
Preference number: 1 (lower is better) Translates to: SPAQLSFCGQRGHFA*MAELSLWLICFFCL Trigger: AAGACAGAAGAAACATATAAGCCACAGTGATAACTCAGCCATTCAGGCAAAGTGGCCTCTCTGTCCACAGAATGAGAGTTGGGCTGGAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036564.8 |
||
3UTR CCA 90 bp | CAGCCCAACTCTCATTCTGTGGACAGAGAGGCCACTTTGCCTGAATaGCTGAGTTATCACTGTGGCTTATATGTTTCTTCTGTCTTTGCT | + |
Preference number: 1 (lower is better) Translates to: QPNSHSVDREATLPE*LSYHCGLYVSSVFA Trigger: AGCAAAGACAGAAGAAACATATAAGCCACAGTGATAACTCAGCCATTCAGGCAAAGTGGCCTCTCTGTCCACAGAATGAGAGTTGGGCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036564.8 |
||
3UTR CAA 90 bp | CAGTGTCTCCAGCCCAACTCTCATTCTGTGGACAGAGAGGCCACTTaGCCTGAATGGCTGAGTTATCACTGTGGCTTATATGTTTCTTCT | + |
Preference number: 2 (lower is better) Translates to: QCLQPNSHSVDREAT*PEWLSYHCGLYVSS Trigger: AGAAGAAACATATAAGCCACAGTGATAACTCAGCCATTCAGGCAAAGTGGCCTCTCTGTCCACAGAATGAGAGTTGGGCTGGAGACACTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036564.8 |
||
3UTR-3UTR CCA 90 bp | ACACACAGGACAGCCAGGACAATGCTCTTGCTTTTCACATGTCTCTTATGTTCTGTCAAGGTTCCTGTATaGACTCCAGTGTCTCCAGCC | + |
Preference number: 2 (lower is better) Translates to: THRTARTMLLLFTCLLCSVKVPV*TPVSPA Trigger: GGCTGGAGACACTGGAGTCCATACAGGAACCTTGAC...AGAACATAAGAGACATGTGAAAAGCAAGAGCATTGTCCTGGCTGTCCTGTGTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036564.8 |
||
3UTR-3UTR TCA 90 bp | TTTAAGCATCCACTGTGTGCCTTTGGCTTCAAGTCAAGGTTCCTGTATGGACTCAGTCAGAGATCTGACTaGTTCTGCCTTTCAATGCTG | + |
Preference number: 2 (lower is better) Translates to: FKHPLCAFGFKSRFLYGLSQRSD*FCLSML Trigger: CAGCATTGAAAGGCAGAATCAGTCAGATCTCTGACT...GAGTCCATACAGGAACCTTGACTTGAAGCCAAAGGCACACAGTGGATGCTTAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036564.8 |
||
3UTR-3UTR CCA 90 bp | CTAAGCTCAAGAGCTAGAGAAAGGCTTAGAAAAGCTGGTCACTTTTTGAGCCTTCCAACTCTCATTCTGTaGACAGAGAGGCCACTTTGC | + |
Preference number: 2 (lower is better) Translates to: LSSRARERLRKAGHFLSLPTLIL*TERPLC Trigger: GCAAAGTGGCCTCTCTGTCCACAGAATGAGAGTTGG...AAGGCTCAAAAAGTGACCAGCTTTTCTAAGCCTTTCTCTAGCTCTTGAGCTTAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000036564.8 |
||
3UTR CAA 90 bp | TTTCCTTATAATCTCAGAAATAATTTAAGCATCCACTGTGTGCCTTaGGCTTCAAGTCAAGGTTCCTGTATGGACTCCAGTGTCTCCAGC | + |
Preference number: 2 (lower is better) Translates to: FPYNLRNNLSIHCVP*ASSQGSCMDSSVSS Trigger: GCTGGAGACACTGGAGTCCATACAGGAACCTTGACTTGAAGCCAAAGGCACACAGTGGATGCTTAAATTATTTCTGAGATTATAAGGAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036564.8 |
||
3UTR-3UTR CCA 90 bp | CCTTATAATCTCAGAAATAATTTAAGCATCCACTGTGTGCCTTTGGCTTCAAGTGCTGAGTTATCACTGTaGCTTATATGTTTCTTCTGT | + |
Preference number: 2 (lower is better) Translates to: PYNLRNNLSIHCVPLASSAELSL*LICFFC Trigger: ACAGAAGAAACATATAAGCCACAGTGATAACTCAGC...ACTTGAAGCCAAAGGCACACAGTGGATGCTTAAATTATTTCTGAGATTATAAGG 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036564.8 |
||
3UTR GCA 72 bp | CTCATTGTGTGGCCCTGGCTAGCCTGGAACTCTCTATaGAGACCAGGTTGGCCCAAAAGTCAGAGATCTGAC | + |
Preference number: 3 (lower is better) Translates to: LIVWPWLAWNSL*RPGWPKSQRSD Trigger: GTCAGATCTCTGACTTTTGGGCCAACCTGGTCTGCATAGAGAGTTCCAGGCTAGCCAGGGCCACACAATGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036564.8 |
||
3UTR CCA 72 bp | TTGATGCATGGTCTCATTGTGTGGCCCTGGCTAGCCTaGAACTCTCTATGCAGACCAGGTTGGCCCAAAAGT | + |
Preference number: 3 (lower is better) Translates to: LMHGLIVWPWLA*NSLCRPGWPKS Trigger: ACTTTTGGGCCAACCTGGTCTGCATAGAGAGTTCCAGGCTAGCCAGGGCCACACAATGAGACCATGCATCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036564.8 |
||
3UTR CCA 72 bp | CTTATCATGTTGATGCATGGTCTCATTGTGTGGCCCTaGCTAGCCTGGAACTCTCTATGCAGACCAGGTTGG | + |
Preference number: 3 (lower is better) Translates to: LIMLMHGLIVWP*LAWNSLCRPGW Trigger: CCAACCTGGTCTGCATAGAGAGTTCCAGGCTAGCCAGGGCCACACAATGAGACCATGCATCAACATGATAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036564.8 |
||
3UTR CCA 72 bp | ACTGTGTGCCTTTGGCTTCAAGTCAAGGTTCCTGTATaGACTCCAGTGTCTCCAGCCCAACTCTCATTCTGT | + |
Preference number: 3 (lower is better) Translates to: TVCLWLQVKVPV*TPVSPAQLSFC Trigger: ACAGAATGAGAGTTGGGCTGGAGACACTGGAGTCCATACAGGAACCTTGACTTGAAGCCAAAGGCACACAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036564.8 |
||
3UTR TCA 72 bp | TGCAGACCAGGTTGGCCCAAAAGTCAGAGATCTGACTaGTTCTGCCTTTCAATGCTGGGATTAAAGATGTGC | + |
Preference number: 3 (lower is better) Translates to: CRPGWPKSQRSD*FCLSMLGLKMC Trigger: GCACATCTTTAATCCCAGCATTGAAAGGCAGAATCAGTCAGATCTCTGACTTTTGGGCCAACCTGGTCTGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036564.8 |
||
3UTR TCA 72 bp | GAGCTAGAGAAAGGCTTAGAAAAGCTGGTCACTTTTTaGGCCTTAGGCCACCTGATCATTGCTCAGGAGATG | + |
Preference number: 3 (lower is better) Translates to: ELEKGLEKLVTF*ALGHLIIAQEM Trigger: CATCTCCTGAGCAATGATCAGGTGGCCTAAGGCTCAAAAAGTGACCAGCTTTTCTAAGCCTTTCTCTAGCTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000036564.8 |
||
3UTR-3UTR CAA 90 bp | CTAAGCTCAAGAGCTAGAGAAAGGCTTAGAAAAGCTGGTCACTTTTTGAGCCTTTCTATGCAGACCAGGTaGGCCCAAAAGTCAGAGATC | + |
Preference number: 3 (lower is better) Translates to: LSSRARERLRKAGHFLSLSMQTR*AQKSEI Trigger: GATCTCTGACTTTTGGGCCAACCTGGTCTGCATAGA...AAGGCTCAAAAAGTGACCAGCTTTTCTAAGCCTTTCTCTAGCTCTTGAGCTTAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000036564.8 |
||
3UTR TCA 72 bp | CAACTCTCATTCTGTGGACAGAGAGGCCACTTTGCCTaGATGGCTGAGTTATCACTGTGGCTTATATGTTTC | + |
Preference number: 3 (lower is better) Translates to: QLSFCGQRGHFA*MAELSLWLICF Trigger: GAAACATATAAGCCACAGTGATAACTCAGCCATTCAGGCAAAGTGGCCTCTCTGTCCACAGAATGAGAGTTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036564.8 |
||
3UTR-3UTR CAA 90 bp | CTCTATGCAGACCAGGTTGGCCCAAAAGTCAGAGATCTGACTGATTCTGCCTTTCTGACAAAGAAATCCTaGAAAAGTGTGGGTAGACAT | + |
Preference number: 3 (lower is better) Translates to: LYADQVGPKVRDLTDSAFLTKKS*KSVGRH Trigger: ATGTCTACCCACACTTTTCAAGGATTTCTTTGTCAG...AAAGGCAGAATCAGTCAGATCTCTGACTTTTGGGCCAACCTGGTCTGCATAGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036564.8 |
||
3UTR TCA 72 bp | TCTATGCAGACCAGGTTGGCCCAAAAGTCAGAGATCTaGCTGATTCTGCCTTTCAATGCTGGGATTAAAGAT | + |
Preference number: 3 (lower is better) Translates to: SMQTRLAQKSEI*LILPFNAGIKD Trigger: ATCTTTAATCCCAGCATTGAAAGGCAGAATCAGTCAGATCTCTGACTTTTGGGCCAACCTGGTCTGCATAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036564.8 |
||
3UTR CCA 72 bp | TCTCATTCTGTGGACAGAGAGGCCACTTTGCCTGAATaGCTGAGTTATCACTGTGGCTTATATGTTTCTTCT | + |
Preference number: 3 (lower is better) Translates to: SHSVDREATLPE*LSYHCGLYVSS Trigger: AGAAGAAACATATAAGCCACAGTGATAACTCAGCCATTCAGGCAAAGTGGCCTCTCTGTCCACAGAATGAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036564.8 |
||
3UTR CCA 72 bp | AACATTTCTATCTTAACATCTTATCATGTTGATGCATaGTCTCATTGTGTGGCCCTGGCTAGCCTGGAACTC | + |
Preference number: 3 (lower is better) Translates to: NISILTSYHVDA*SHCVALASLEL Trigger: GAGTTCCAGGCTAGCCAGGGCCACACAATGAGACCATGCATCAACATGATAAGATGTTAAGATAGAAATGTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036564.8 |
||
3UTR-3UTR CAA 90 bp | AAACGTAAGAAGACAGACGTACCGACTATACTTTTCAGAGTTATATTTTGGAGCGACAGAGAGGCCACTTaGCCTGAATGGCTGAGTTAT | + |
Preference number: 3 (lower is better) Translates to: KRKKTDVPTILFRVIFWSDREAT*PEWLSY Trigger: ATAACTCAGCCATTCAGGCAAAGTGGCCTCTCTGTC...GCTCCAAAATATAACTCTGAAAAGTATAGTCGGTACGTCTGTCTTCTTACGTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036564.8 |
||
3UTR GCA 72 bp | TTTTCTGAACACACAGGACAGCCAGGACAATGCTCTTaGTTTTCACATGTCTCTTATGTTCTTAATGGTCTG | + |
Preference number: 3 (lower is better) Translates to: FSEHTGQPGQCS*FSHVSYVLNGL Trigger: CAGACCATTAAGAACATAAGAGACATGTGAAAAGCAAGAGCATTGTCCTGGCTGTCCTGTGTGTTCAGAAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036564.8 |
||
3UTR GCA 72 bp | CCAGTGTTTTCTGAACACACAGGACAGCCAGGACAATaGTCTTGCTTTTCACATGTCTCTTATGTTCTTAAT | + |
Preference number: 3 (lower is better) Translates to: PVFSEHTGQPGQ*SCFSHVSYVLN Trigger: ATTAAGAACATAAGAGACATGTGAAAAGCAAGAGCATTGTCCTGGCTGTCCTGTGTGTTCAGAAAACACTGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036564.8 |
||
3UTR TCA 72 bp | AATAATTCAAAAATAAGAATGAAGGCCAGTGTTTTCTaGACACACAGGACAGCCAGGACAATGCTCTTGCTT | + |
Preference number: 3 (lower is better) Translates to: NNSKIRMKASVF*THRTARTMLLL Trigger: AAGCAAGAGCATTGTCCTGGCTGTCCTGTGTGTTCAGAAAACACTGGCCTTCATTCTTATTTTTGAATTATT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000036564.8 |
||
CDS-3UTR GCA 90 bp | CCACACATGGTCCTGATTCCCAAAGAGGAGTTATCCTTCTCAAGTCTCACCCTTAGTAGATGCTGTTGTTaGTGGGGAGAGAGCTCCCTG | + |
Preference number: 4 (lower is better) Translates to: PHMVLIPKEELSFSSLTLSRCCC*WGESSL Trigger: CAGGGAGCTCTCTCCCCAGCAACAACAGCATCTACT...AAGGGTGAGACTTGAGAAGGATAACTCCTCTTTGGGAATCAGGACCATGTGTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036564.8 |
||
3UTR CAA 72 bp | CAGCCCAACTCTCATTCTGTGGACAGAGAGGCCACTTaGCCTGAATGGCTGAGTTATCACTGTGGCTTATAT | + |
Preference number: 4 (lower is better) Translates to: QPNSHSVDREAT*PEWLSYHCGLY Trigger: ATATAAGCCACAGTGATAACTCAGCCATTCAGGCAAAGTGGCCTCTCTGTCCACAGAATGAGAGTTGGGCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036564.8 |
||
CDS-3UTR TCA 90 bp | TGCCTTTCAATGCTGGGATTAAAGATGTGCCTTACCACAAGATCTTTATTCTTTTTTCCCACCATGGAGTaGAGCGGGGTGTCCTGGTCC | + |
Preference number: 4 (lower is better) Translates to: CLSMLGLKMCLTTRSLFFFPTME*SGVSWS Trigger: GGACCAGGACACCCCGCTTCACTCCATGGTGGGAAA...AAAGAATAAAGATCTTGTGGTAAGGCACATCTTTAATCCCAGCATTGAAAGGCA 47% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000036564.8 |
||
CDS-3UTR GCA 90 bp | TCTGTGGACAGAGAGGCCACTTTGCCTGAATGGCTGAGTTATCACTGTGGCTTACTCCCTGCTTGCCAGTaGAAAATATTGTGGAAATTT | + |
Preference number: 4 (lower is better) Translates to: SVDREATLPEWLSYHCGLLPACQ*KILWKF Trigger: AAATTTCCACAATATTTTGCACTGGCAAGCAGGGAG...TAAGCCACAGTGATAACTCAGCCATTCAGGCAAAGTGGCCTCTCTGTCCACAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036564.8 |
||
CDS-3UTR CCA 90 bp | CTCTATGCAGACCAGGTTGGCCCAAAAGTCAGAGATCTGACTGATTCTGCCTTTTCTCTCCTTGCTTCTTaGGCTTCTTCTGTCAAACAT | + |
Preference number: 4 (lower is better) Translates to: LYADQVGPKVRDLTDSAFSLLAS*ASSVKH Trigger: ATGTTTGACAGAAGAAGCCCAAGAAGCAAGGAGAGA...AAAGGCAGAATCAGTCAGATCTCTGACTTTTGGGCCAACCTGGTCTGCATAGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036564.8 |
||
CDS-3UTR CCA 90 bp | CCTTATAATCTCAGAAATAATTTAAGCATCCACTGTGTGCCTTTGGCTTCAAGTAGATGCTGTTGTTGCTaGGGAGAGAGCTCCCTGCTT | + |
Preference number: 4 (lower is better) Translates to: PYNLRNNLSIHCVPLASSRCCCC*GESSLL Trigger: AAGCAGGGAGCTCTCTCCCCAGCAACAACAGCATCT...ACTTGAAGCCAAAGGCACACAGTGGATGCTTAAATTATTTCTGAGATTATAAGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036564.8 |
||
3UTR CAA 72 bp | AATCTCAGAAATAATTTAAGCATCCACTGTGTGCCTTaGGCTTCAAGTCAAGGTTCCTGTATGGACTCCAGT | + |
Preference number: 4 (lower is better) Translates to: NLRNNLSIHCVP*ASSQGSCMDSS Trigger: ACTGGAGTCCATACAGGAACCTTGACTTGAAGCCAAAGGCACACAGTGGATGCTTAAATTATTTCTGAGATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036564.8 |
||
CDS-3UTR TCA 90 bp | AGCAAAACTCTGATTGCTGACAACACTCATAAACCAACAATTGCCTTTTGTATTTGGAAATTTCTGGACTaGAATCGGACCTTCTGGGGC | + |
Preference number: 4 (lower is better) Translates to: SKTLIADNTHKPTIAFCIWKFLD*NRTFWG Trigger: GCCCCAGAAGGTCCGATTTCAGTCCAGAAATTTCCA...AATACAAAAGGCAATTGTTGGTTTATGAGTGTTGTCAGCAATCAGAGTTTTGCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000036564.8 |
||
CDS-3UTR GCA 90 bp | AAACGTAAGAAGACAGACGTACCGACTATACTTTTCAGAGTTATATTTTGGAGCACTGCACAAAGTAGATaGTGTTGTTGCTGGGGAGAG | + |
Preference number: 4 (lower is better) Translates to: KRKKTDVPTILFRVIFWSTAQSR*CCCWGE Trigger: CTCTCCCCAGCAACAACAGCATCTACTTTGTGCAGT...GCTCCAAAATATAACTCTGAAAAGTATAGTCGGTACGTCTGTCTTCTTACGTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000036564.8 |
||
CDS-3UTR CCA 90 bp | CCTTATAATCTCAGAAATAATTTAAGCATCCACTGTGTGCCTTTGGCTTCAAGTGGTCTAAGGTTTCATTaGTCAGGTCACAGAAGAGCG | + |
Preference number: 4 (lower is better) Translates to: PYNLRNNLSIHCVPLASSGLRFH*SGHRRA Trigger: CGCTCTTCTGTGACCTGACCAATGAAACCTTAGACC...ACTTGAAGCCAAAGGCACACAGTGGATGCTTAAATTATTTCTGAGATTATAAGG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036564.8 |
||
CDS-3UTR CCA 90 bp | GTTTCTTCTGTCTTTGCTGCTGAAAAATATATGCTGCATTTAGACAACATAGGTCTGTCAAACATGGGCTaGTACATTTCAGCCACTACG | + |
Preference number: 4 (lower is better) Translates to: VSSVFAAEKYMLHLDNIGLSNMG*YISATT Trigger: CGTAGTGGCTGAAATGTACCAGCCCATGTTTGACAG...ACCTATGTTGTCTAAATGCAGCATATATTTTTCAGCAGCAAAGACAGAAGAAAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000036564.8 |
||
CDS-3UTR GCA 90 bp | GAAAATCAAAACAGAAGTTTAGTAAGCTGTTCTAGGCAGAAGACATCCCGTTCTTGGTTGTATTTCTGTTaGACTGCTCAAGAGTATGAT | + |
Preference number: 4 (lower is better) Translates to: ENQNRSLVSCSRQKTSRSWLYFC*TAQEYD Trigger: ATCATACTCTTGAGCAGTGCAACAGAAATACAACCA...AGAACGGGATGTCTTCTGCCTAGAACAGCTTACTAAACTTCTGTTTTGATTTTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036564.8 |
||
CDS-3UTR CCA 90 bp | GTTTCTTCTGTCTTTGCTGCTGAAAAATATATGCTGCATTTAGACAACATAGGTTTCTTCTGTCAAACATaGGCTGGTACATTTCAGCCA | + |
Preference number: 4 (lower is better) Translates to: VSSVFAAEKYMLHLDNIGFFCQT*AGTFQP Trigger: TGGCTGAAATGTACCAGCCCATGTTTGACAGAAGAA...ACCTATGTTGTCTAAATGCAGCATATATTTTTCAGCAGCAAAGACAGAAGAAAC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000036564.8 |
||
CDS CCA 90 bp | TCATCACCCTCCCGTAATACAGCTCGTATGGGTCTAAGGTTTCATTaGTCAGGTCACAGAAGAGCGCCGTGGTCCCCCAGCAGTCAACTT | + |
Preference number: 5 (lower is better) Translates to: SSPSRNTARMGLRFH*SGHRRAPWSPSSQL Trigger: AAGTTGACTGCTGGGGGACCACGGCGCTCTTCTGTGACCTGACCAATGAAACCTTAGACCCATACGAGCTGTATTACGGGAGGGTGATGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000036564.8 |
||
CDS GCA 90 bp | CTTCCCATTGGCTCTGTCCATACATCTTGTACTGCACAAAGTAGATaGTGTTGTTGCTGGGGAGAGAGCTCCCTGCTTGCCAGTGCAAAA | + |
Preference number: 5 (lower is better) Translates to: LPIGSVHTSCTAQSR*CCCWGESSLLASAK Trigger: TTTTGCACTGGCAAGCAGGGAGCTCTCTCCCCAGCAACAACAGCATCTACTTTGTGCAGTACAAGATGTATGGACAGAGCCAATGGGAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036564.8 |
||
CDS GCA 90 bp | GGCTCTGTCCATACATCTTGTACTGCACAAAGTAGATGCTGTTGTTaGTGGGGAGAGAGCTCCCTGCTTGCCAGTGCAAAATATTGTGGA | + |
Preference number: 5 (lower is better) Translates to: GSVHTSCTAQSRCCC*WGESSLLASAKYCG Trigger: TCCACAATATTTTGCACTGGCAAGCAGGGAGCTCTCTCCCCAGCAACAACAGCATCTACTTTGTGCAGTACAAGATGTATGGACAGAGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036564.8 |
||
CDS GCA 90 bp | GTACTGCACAAAGTAGATGCTGTTGTTGCTGGGGAGAGAGCTCCCTaGTTGCCAGTGCAAAATATTGTGGAAATTTCTGGACTGAAATCG | + |
Preference number: 5 (lower is better) Translates to: VLHKVDAVVAGERAP*LPVQNIVEISGLKS Trigger: CGATTTCAGTCCAGAAATTTCCACAATATTTTGCACTGGCAAGCAGGGAGCTCTCTCCCCAGCAACAACAGCATCTACTTTGTGCAGTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036564.8 |
||
CDS CCA 90 bp | TCTGTCCATACATCTTGTACTGCACAAAGTAGATGCTGTTGTTGCTaGGGAGAGAGCTCCCTGCTTGCCAGTGCAAAATATTGTGGAAAT | + |
Preference number: 5 (lower is better) Translates to: SVHTSCTAQSRCCCC*GESSLLASAKYCGN Trigger: ATTTCCACAATATTTTGCACTGGCAAGCAGGGAGCTCTCTCCCCAGCAACAACAGCATCTACTTTGTGCAGTACAAGATGTATGGACAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036564.8 |
||
CDS CCA 90 bp | TTCTGTCAAACATGGGCTGGTACATTTCAGCCACTACGCAGTAGCTaGAATGAGGTATCAGACCTTCAATTTCAACAGCTCTCTGAGTTC | + |
Preference number: 5 (lower is better) Translates to: FCQTWAGTFQPLRSS*NEVSDLQFQQLSEF Trigger: GAACTCAGAGAGCTGTTGAAATTGAAGGTCTGATACCTCATTCCAGCTACTGCGTAGTGGCTGAAATGTACCAGCCCATGTTTGACAGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036564.8 |
||
CDS-3UTR CAA 90 bp | GAAAATCAAAACAGAAGTTTAGTAAGCTGTTCTAGGCAGAAGACATCCCGTTCTAGATACACGAGCTGGTaGTATTTCTGTTGCACTGCT | + |
Preference number: 5 (lower is better) Translates to: ENQNRSLVSCSRQKTSRSRYTSW*YFCCTA Trigger: AGCAGTGCAACAGAAATACAACCAGCTCGTGTATCT...AGAACGGGATGTCTTCTGCCTAGAACAGCTTACTAAACTTCTGTTTTGATTTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036564.8 |
||
CDS-3UTR CAA 90 bp | AGCAAAACTCTGATTGCTGACAACACTCATAAACCAACAATTGCCTTTTGTATTAACTTTATCTTCCCATaGGCTCTGTCCATACATCTT | + |
Preference number: 5 (lower is better) Translates to: SKTLIADNTHKPTIAFCINFIFP*ALSIHL Trigger: AAGATGTATGGACAGAGCCAATGGGAAGATAAAGTT...AATACAAAAGGCAATTGTTGGTTTATGAGTGTTGTCAGCAATCAGAGTTTTGCT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036564.8 |
||
CDS-3UTR CAA 90 bp | TGCCTTTCAATGCTGGGATTAAAGATGTGCCTTACCACAAGATCTTTATTCTTTTCCTTCTCTAGTGAATaGTTGATTGTGAAAACTCTG | + |
Preference number: 5 (lower is better) Translates to: CLSMLGLKMCLTTRSLFFSFSSE*LIVKTL Trigger: CAGAGTTTTCACAATCAACAATTCACTAGAGAAGGA...AAAGAATAAAGATCTTGTGGTAAGGCACATCTTTAATCCCAGCATTGAAAGGCA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036564.8 |
||
CDS GCA 72 bp | GGCTCTGTCCATACATCTTGTACTGCACAAAGTAGATaGTGTTGTTGCTGGGGAGAGAGCTCCCTGCTTGCC | + |
Preference number: 6 (lower is better) Translates to: GSVHTSCTAQSR*CCCWGESSLLA Trigger: GGCAAGCAGGGAGCTCTCTCCCCAGCAACAACAGCATCTACTTTGTGCAGTACAAGATGTATGGACAGAGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036564.8 |
||
CDS CAA 72 bp | TCGGACCTTCTGGGGCGTCAGAGATACACGAGCTGGTaGTATTTCTGTTGCACTGCTCAAGAGTATGATGAG | + |
Preference number: 6 (lower is better) Translates to: SDLLGRQRYTSW*YFCCTAQEYDE Trigger: CTCATCATACTCTTGAGCAGTGCAACAGAAATACAACCAGCTCGTGTATCTCTGACGCCCCAGAAGGTCCGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036564.8 |
||
CDS CAA 72 bp | CGCCGTGGTCCCCCAGCAGTCAACTTTATCTTCCCATaGGCTCTGTCCATACATCTTGTACTGCACAAAGTA | + |
Preference number: 6 (lower is better) Translates to: RRGPPAVNFIFP*ALSIHLVLHKV Trigger: TACTTTGTGCAGTACAAGATGTATGGACAGAGCCAATGGGAAGATAAAGTTGACTGCTGGGGGACCACGGCG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000036564.8 |
||
CDS GCA 72 bp | CATACATCTTGTACTGCACAAAGTAGATGCTGTTGTTaGTGGGGAGAGAGCTCCCTGCTTGCCAGTGCAAAA | + |
Preference number: 6 (lower is better) Translates to: HTSCTAQSRCCC*WGESSLLASAK Trigger: TTTTGCACTGGCAAGCAGGGAGCTCTCTCCCCAGCAACAACAGCATCTACTTTGTGCAGTACAAGATGTATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036564.8 |
||
CDS CAA 90 bp | CTGCACAAAGTAGATGCTGTTGTTGCTGGGGAGAGAGCTCCCTGCTaGCCAGTGCAAAATATTGTGGAAATTTCTGGACTGAAATCGGAC | + |
Preference number: 6 (lower is better) Translates to: LHKVDAVVAGERAPC*PVQNIVEISGLKSD Trigger: GTCCGATTTCAGTCCAGAAATTTCCACAATATTTTGCACTGGCAAGCAGGGAGCTCTCTCCCCAGCAACAACAGCATCTACTTTGTGCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036564.8 |
||
CDS TCA 72 bp | GCTTGCCAGTGCAAAATATTGTGGAAATTTCTGGACTaGAATCGGACCTTCTGGGGCGTCAGAGATACACGA | + |
Preference number: 6 (lower is better) Translates to: ACQCKILWKFLD*NRTFWGVRDTR Trigger: TCGTGTATCTCTGACGCCCCAGAAGGTCCGATTTCAGTCCAGAAATTTCCACAATATTTTGCACTGGCAAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036564.8 |
||
CDS CCA 72 bp | TCCCTGCTTGCCAGTGCAAAATATTGTGGAAATTTCTaGACTGAAATCGGACCTTCTGGGGCGTCAGAGATA | + |
Preference number: 6 (lower is better) Translates to: SLLASAKYCGNF*TEIGPSGASEI Trigger: TATCTCTGACGCCCCAGAAGGTCCGATTTCAGTCCAGAAATTTCCACAATATTTTGCACTGGCAAGCAGGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036564.8 |
||
CDS CCA 72 bp | ACATCTTGTACTGCACAAAGTAGATGCTGTTGTTGCTaGGGAGAGAGCTCCCTGCTTGCCAGTGCAAAATAT | + |
Preference number: 6 (lower is better) Translates to: TSCTAQSRCCCC*GESSLLASAKY Trigger: ATATTTTGCACTGGCAAGCAGGGAGCTCTCTCCCCAGCAACAACAGCATCTACTTTGTGCAGTACAAGATGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036564.8 |
||
CDS CCA 72 bp | ACATGGGCTGGTACATTTCAGCCACTACGCAGTAGCTaGAATGAGGTATCAGACCTTCAATTTCAACAGCTC | + |
Preference number: 6 (lower is better) Translates to: TWAGTFQPLRSS*NEVSDLQFQQL Trigger: GAGCTGTTGAAATTGAAGGTCTGATACCTCATTCCAGCTACTGCGTAGTGGCTGAAATGTACCAGCCCATGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036564.8 |
||
CDS GCA 72 bp | AAAGTAGATGCTGTTGTTGCTGGGGAGAGAGCTCCCTaGTTGCCAGTGCAAAATATTGTGGAAATTTCTGGA | + |
Preference number: 6 (lower is better) Translates to: KVDAVVAGERAP*LPVQNIVEISG Trigger: TCCAGAAATTTCCACAATATTTTGCACTGGCAAGCAGGGAGCTCTCTCCCCAGCAACAACAGCATCTACTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036564.8 |