Pregenerated sensors for IL22RA1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000037157Ensembl transcript IDs: ENSMUST00000102546.4
Found 136 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GGGTGGCTCTCCAGATTTCCCTGCATTACCCCACTCTGTGTGACCTaGCTGCTGGGCCCTGTGCCACAGGCTATTCGCACACGCCGCCTG | + |
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Preference number: 1 (lower is better) Translates to: GWLSRFPCITPLCVT*LLGPVPQAIRTRRL Trigger: CAGGCGGCGTGTGCGAATAGCCTGTGGCACAGGGCCCAGCAGGCAGGTCACACAGAGTGGGGTAATGCAGGGAAATCTGGAGAGCCACCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102546.4 |
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| 3UTR TCA 90 bp | GAGCTGGGTGGCTCTCCAGATTTCCCTGCATTACCCCACTCTGTGTaGCCTGCCTGCTGGGCCCTGTGCCACAGGCTATTCGCACACGCC | + |
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Preference number: 1 (lower is better) Translates to: ELGGSPDFPALPHSV*PACWALCHRLFAHA Trigger: GGCGTGTGCGAATAGCCTGTGGCACAGGGCCCAGCAGGCAGGTCACACAGAGTGGGGTAATGCAGGGAAATCTGGAGAGCCACCCAGCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102546.4 |
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| 3UTR GCA 90 bp | GCCTCACTCTTGGTTGAGGGAGCTGGGTGGCTCTCCAGATTTCCCTaGATTACCCCACTCTGTGTGACCTGCCTGCTGGGCCCTGTGCCA | + |
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Preference number: 1 (lower is better) Translates to: ASLLVEGAGWLSRFP*ITPLCVTCLLGPVP Trigger: TGGCACAGGGCCCAGCAGGCAGGTCACACAGAGTGGGGTAATGCAGGGAAATCTGGAGAGCCACCCAGCTCCCTCAACCAAGAGTGAGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102546.4 |
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| 3UTR TCA 90 bp | TCCAGTCCAAGAACCTTCAGAGATGGTGAATGCCTCACTCTTGGTTaGGGGAGCTGGGTGGCTCTCCAGATTTCCCTGCATTACCCCACT | + |
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Preference number: 1 (lower is better) Translates to: SSPRTFRDGECLTLG*GSWVALQISLHYPT Trigger: AGTGGGGTAATGCAGGGAAATCTGGAGAGCCACCCAGCTCCCTCAACCAAGAGTGAGGCATTCACCATCTCTGAAGGTTCTTGGACTGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102546.4 |
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| 3UTR TCA 90 bp | TTACACTTGGTCCCCAGCTTCCAGTCCAAGAACCTTCAGAGATGGTaGATGCCTCACTCTTGGTTGAGGGAGCTGGGTGGCTCTCCAGAT | + |
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Preference number: 1 (lower is better) Translates to: LHLVPSFQSKNLQRW*MPHSWLRELGGSPD Trigger: ATCTGGAGAGCCACCCAGCTCCCTCAACCAAGAGTGAGGCATTCACCATCTCTGAAGGTTCTTGGACTGGAAGCTGGGGACCAAGTGTAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102546.4 |
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| 3UTR-3UTR TCA 90 bp | ACTGGGAGTGAGCCTCCACTGCACTCTGCTCTCAAGTCTTGCTGCTGTGTGGCCTGCCTCACTCTTGGTTaGGGGAGCTGGGTGGCTCTC | + |
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Preference number: 2 (lower is better) Translates to: TGSEPPLHSALKSCCCVACLTLG*GSWVAL Trigger: GAGAGCCACCCAGCTCCCTCAACCAAGAGTGAGGCA...GGCCACACAGCAGCAAGACTTGAGAGCAGAGTGCAGTGGAGGCTCACTCCCAGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102546.4 |
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| 3UTR CAA 90 bp | CACTGCACTCTGCTCTCAAGTCTTGCTGCTGTGTGGCCTCTGGCCTaGGCTGAAGTGCCTGTTACACTTGGTCCCCAGCTTCCAGTCCAA | + |
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Preference number: 2 (lower is better) Translates to: HCTLLSSLAAVWPLA*AEVPVTLGPQLPVQ Trigger: TTGGACTGGAAGCTGGGGACCAAGTGTAACAGGCACTTCAGCCAAGGCCAGAGGCCACACAGCAGCAAGACTTGAGAGCAGAGTGCAGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102546.4 |
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| 3UTR-3UTR CCA 90 bp | ACTGGGAGTGAGCCTCCACTGCACTCTGCTCTCAAGTCTTGCTGCTGTGTGGCCGGTGTGTTAGCTGGGTaGGGCAGAAGGAAACTTAGG | + |
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Preference number: 2 (lower is better) Translates to: TGSEPPLHSALKSCCCVAGVLAG*GRRKLR Trigger: CCTAAGTTTCCTTCTGCCCCACCCAGCTAACACACC...GGCCACACAGCAGCAAGACTTGAGAGCAGAGTGCAGTGGAGGCTCACTCCCAGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102546.4 |
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| 3UTR-3UTR CCA 90 bp | ATGCAACACCCCTCACCTCCTGATGGATTAAGGAGTCACTCCTGGGTGAAGCCTCTGCTGTGTGGCCTCTaGCCTTGGCTGAAGTGCCTG | + |
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Preference number: 2 (lower is better) Translates to: MQHPSPPDGLRSHSWVKPLLCGL*PWLKCL Trigger: CAGGCACTTCAGCCAAGGCCAGAGGCCACACAGCAG...AGGCTTCACCCAGGAGTGACTCCTTAATCCATCAGGAGGTGAGGGGTGTTGCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102546.4 |
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| 3UTR-3UTR TCA 90 bp | TTTATGCAACACCCCTCACCTCCTGATGGATTAAGGAGTCACTCCTGGGTGAAGTTCCCTGACTGGGAGTaGGCCTCCACTGCACTCTGC | + |
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Preference number: 2 (lower is better) Translates to: FMQHPSPPDGLRSHSWVKFPDWE*ASTALC Trigger: GCAGAGTGCAGTGGAGGCTCACTCCCAGTCAGGGAA...CTTCACCCAGGAGTGACTCCTTAATCCATCAGGAGGTGAGGGGTGTTGCATAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102546.4 |
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| 3UTR CAA 90 bp | CAGCTTCCAGTCCAAGAACCTTCAGAGATGGTGAATGCCTCACTCTaGGTTGAGGGAGCTGGGTGGCTCTCCAGATTTCCCTGCATTACC | + |
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Preference number: 2 (lower is better) Translates to: QLPVQEPSEMVNASL*VEGAGWLSRFPCIT Trigger: GGTAATGCAGGGAAATCTGGAGAGCCACCCAGCTCCCTCAACCAAGAGTGAGGCATTCACCATCTCTGAAGGTTCTTGGACTGGAAGCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102546.4 |
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| 3UTR-3UTR TCA 90 bp | GCCATGCTCCTTTCAAATGCTTTTCTCTGGACGCCTGACTGCAGAAAACCTTTATTACCCCACTCTGTGTaGCCTGCCTGCTGGGCCCTG | + |
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Preference number: 2 (lower is better) Translates to: AMLLSNAFLWTPDCRKPLLPHSV*PACWAL Trigger: CAGGGCCCAGCAGGCAGGTCACACAGAGTGGGGTAA...TAAAGGTTTTCTGCAGTCAGGCGTCCAGAGAAAAGCATTTGAAAGGAGCATGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000102546.4 |
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| 3UTR-3UTR CCA 90 bp | CAAGAACCTTCAGAGATGGTGAATGCCTCACTCTTGGTTGAGGGAGCTGGGTGGTGTGGGTGTGTTAGCTaGGTGGGGCAGAAGGAAACT | + |
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Preference number: 2 (lower is better) Translates to: QEPSEMVNASLLVEGAGWCGCVS*VGQKET Trigger: AGTTTCCTTCTGCCCCACCCAGCTAACACACCCACA...CCACCCAGCTCCCTCAACCAAGAGTGAGGCATTCACCATCTCTGAAGGTTCTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102546.4 |
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| 3UTR-3UTR GCA 90 bp | GCGCCATGCTCCTTTCAAATGCTTTTCTCTGGACGCCTGACTGCAGAAAACCTTGCTCTCAAGTCTTGCTaGTGTGTGGCCTCTGGCCTT | + |
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Preference number: 2 (lower is better) Translates to: APCSFQMLFSGRLTAENLALKSC*CVASGL Trigger: AAGGCCAGAGGCCACACAGCAGCAAGACTTGAGAGC...AAGGTTTTCTGCAGTCAGGCGTCCAGAGAAAAGCATTTGAAAGGAGCATGGCGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102546.4 |
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| 3UTR-3UTR CCA 90 bp | CCTTGGCTGAAGTGCCTGTTACACTTGGTCCCCAGCTTCCAGTCCAAGAACCTTATTTGTGTTCCCACATaGGGCCCAAATCTTCCTCTC | + |
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Preference number: 2 (lower is better) Translates to: PWLKCLLHLVPSFQSKNLICVPT*GPNLPL Trigger: GAGAGGAAGATTTGGGCCCCATGTGGGAACACAAAT...AAGGTTCTTGGACTGGAAGCTGGGGACCAAGTGTAACAGGCACTTCAGCCAAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102546.4 |
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| 3UTR-3UTR CCA 90 bp | TGCTCCTTTCAAATGCTTTTCTCTGGACGCCTGACTGCAGAAAACCTTTATGCAAGTCTTGCTGCTGTGTaGCCTCTGGCCTTGGCTGAA | + |
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Preference number: 2 (lower is better) Translates to: CSFQMLFSGRLTAENLYASLAAV*PLALAE Trigger: TTCAGCCAAGGCCAGAGGCCACACAGCAGCAAGACT...TGCATAAAGGTTTTCTGCAGTCAGGCGTCCAGAGAAAAGCATTTGAAAGGAGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102546.4 |
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| 3UTR TCA 72 bp | GGCTCTCCAGATTTCCCTGCATTACCCCACTCTGTGTaGCCTGCCTGCTGGGCCCTGTGCCACAGGCTATTC | + |
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Preference number: 3 (lower is better) Translates to: GSPDFPALPHSV*PACWALCHRLF Trigger: GAATAGCCTGTGGCACAGGGCCCAGCAGGCAGGTCACACAGAGTGGGGTAATGCAGGGAAATCTGGAGAGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102546.4 |
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| 3UTR GCA 72 bp | TTGGTTGAGGGAGCTGGGTGGCTCTCCAGATTTCCCTaGATTACCCCACTCTGTGTGACCTGCCTGCTGGGC | + |
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Preference number: 3 (lower is better) Translates to: LVEGAGWLSRFP*ITPLCVTCLLG Trigger: GCCCAGCAGGCAGGTCACACAGAGTGGGGTAATGCAGGGAAATCTGGAGAGCCACCCAGCTCCCTCAACCAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102546.4 |
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| 3UTR-3UTR CAA 90 bp | AGTGAGCCTCCACTGCACTCTGCTCTCAAGTCTTGCTGCTGTGTGGCCTCTGGCGTGAATGCCTCACTCTaGGTTGAGGGAGCTGGGTGG | + |
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Preference number: 3 (lower is better) Translates to: SEPPLHSALKSCCCVASGVNASL*VEGAGW Trigger: CCACCCAGCTCCCTCAACCAAGAGTGAGGCATTCAC...GCCAGAGGCCACACAGCAGCAAGACTTGAGAGCAGAGTGCAGTGGAGGCTCACT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102546.4 |
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| 3UTR GCA 72 bp | TCCAGATTTCCCTGCATTACCCCACTCTGTGTGACCTaGCTGCTGGGCCCTGTGCCACAGGCTATTCGCACA | + |
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Preference number: 3 (lower is better) Translates to: SRFPCITPLCVT*LLGPVPQAIRT Trigger: TGTGCGAATAGCCTGTGGCACAGGGCCCAGCAGGCAGGTCACACAGAGTGGGGTAATGCAGGGAAATCTGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102546.4 |
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| 3UTR GCA 72 bp | GTCTTGCTGCTGTGTGGCCTCTGGCCTTGGCTGAAGTaGCTGTTACACTTGGTCCCCAGCTTCCAGTCCAAG | + |
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Preference number: 3 (lower is better) Translates to: VLLLCGLWPWLK*LLHLVPSFQSK Trigger: CTTGGACTGGAAGCTGGGGACCAAGTGTAACAGGCACTTCAGCCAAGGCCAGAGGCCACACAGCAGCAAGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102546.4 |
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| 3UTR CCA 72 bp | GCACTCTGCTCTCAAGTCTTGCTGCTGTGTGGCCTCTaGCCTTGGCTGAAGTGCCTGTTACACTTGGTCCCC | + |
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Preference number: 3 (lower is better) Translates to: ALCSQVLLLCGL*PWLKCLLHLVP Trigger: GGGGACCAAGTGTAACAGGCACTTCAGCCAAGGCCAGAGGCCACACAGCAGCAAGACTTGAGAGCAGAGTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102546.4 |
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| 3UTR TCA 72 bp | GTCCCCAGCTTCCAGTCCAAGAACCTTCAGAGATGGTaGATGCCTCACTCTTGGTTGAGGGAGCTGGGTGGC | + |
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Preference number: 3 (lower is better) Translates to: VPSFQSKNLQRW*MPHSWLRELGG Trigger: GCCACCCAGCTCCCTCAACCAAGAGTGAGGCATTCACCATCTCTGAAGGTTCTTGGACTGGAAGCTGGGGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102546.4 |
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| 3UTR TCA 72 bp | CTCAAGTCTTGCTGCTGTGTGGCCTCTGGCCTTGGCTaGAGTGCCTGTTACACTTGGTCCCCAGCTTCCAGT | + |
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Preference number: 3 (lower is better) Translates to: LKSCCCVASGLG*SACYTWSPASS Trigger: ACTGGAAGCTGGGGACCAAGTGTAACAGGCACTTCAGCCAAGGCCAGAGGCCACACAGCAGCAAGACTTGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102546.4 |
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| 3UTR CCA 72 bp | TGCTCTCAAGTCTTGCTGCTGTGTGGCCTCTGGCCTTaGCTGAAGTGCCTGTTACACTTGGTCCCCAGCTTC | + |
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Preference number: 3 (lower is better) Translates to: CSQVLLLCGLWP*LKCLLHLVPSF Trigger: GAAGCTGGGGACCAAGTGTAACAGGCACTTCAGCCAAGGCCAGAGGCCACACAGCAGCAAGACTTGAGAGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102546.4 |
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| 3UTR CCA 72 bp | ACCTGTGACTTAGTGGGTGTGGGTGTGTTAGCTGGGTaGGGCAGAAGGAAACTTAGGCCTGCTTGCTCCGAT | + |
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Preference number: 3 (lower is better) Translates to: TCDLVGVGVLAG*GRRKLRPACSD Trigger: ATCGGAGCAAGCAGGCCTAAGTTTCCTTCTGCCCCACCCAGCTAACACACCCACACCCACTAAGTCACAGGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102546.4 |
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| 3UTR-3UTR CAA 90 bp | ATGCAACACCCCTCACCTCCTGATGGATTAAGGAGTCACTCCTGGGTGAAGCCTGTCTTCACCGTACATTaGTGTTCCCACATGGGGCCC | + |
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Preference number: 3 (lower is better) Translates to: MQHPSPPDGLRSHSWVKPVFTVH*CSHMGP Trigger: GGGCCCCATGTGGGAACACAAATGTACGGTGAAGAC...AGGCTTCACCCAGGAGTGACTCCTTAATCCATCAGGAGGTGAGGGGTGTTGCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102546.4 |
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| 3UTR GCA 72 bp | GCCGAGATTCAAAAGCCTTTGGCTTCCAAGGCGCCATaGTCCTTTCAAATGCTTTTCTCTGGACGCCTGACT | + |
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Preference number: 3 (lower is better) Translates to: AEIQKPLASKAP*SFQMLFSGRLT Trigger: AGTCAGGCGTCCAGAGAAAAGCATTTGAAAGGAGCATGGCGCCTTGGAAGCCAAAGGCTTTTGAATCTCGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102546.4 |
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| 3UTR CCA 72 bp | CCACTAGAGTCTTCACCGTACATTTGTGTTCCCACATaGGGCCCAAATCTTCCTCTCATTCTCTCGAGGGCA | + |
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Preference number: 3 (lower is better) Translates to: PLESSPYICVPT*GPNLPLILSRA Trigger: TGCCCTCGAGAGAATGAGAGGAAGATTTGGGCCCCATGTGGGAACACAAATGTACGGTGAAGACTCTAGTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102546.4 |
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| 3UTR CCA 72 bp | CACCCCTCACCTCCTGATGGATTAAGGAGTCACTCCTaGGTGAAGCCTCTCACAGTAGAGCAAAGAAAGGTT | + |
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Preference number: 3 (lower is better) Translates to: HPSPPDGLRSHS*VKPLTVEQRKV Trigger: AACCTTTCTTTGCTCTACTGTGAGAGGCTTCACCCAGGAGTGACTCCTTAATCCATCAGGAGGTGAGGGGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102546.4 |
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| CDS-3UTR GCA 90 bp | AGTGAGCCTCCACTGCACTCTGCTCTCAAGTCTTGCTGCTGTGTGGCCTCTGGCCTCCAGCTCAGAGGCTaGAGCACTGGGGCACATGGC | + |
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Preference number: 4 (lower is better) Translates to: SEPPLHSALKSCCCVASGLQLRG*STGAHG Trigger: GCCATGTGCCCCAGTGCTGCAGCCTCTGAGCTGGAG...GCCAGAGGCCACACAGCAGCAAGACTTGAGAGCAGAGTGCAGTGGAGGCTCACT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102546.4 |
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| CDS-3UTR CCA 90 bp | ACTGGGAGTGAGCCTCCACTGCACTCTGCTCTCAAGTCTTGCTGCTGTGTGGCCCTCCAGGAGGCTCCCTaGGCCCAGACACCACCACTT | + |
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Preference number: 4 (lower is better) Translates to: TGSEPPLHSALKSCCCVALQEAP*AQTPPL Trigger: AAGTGGTGGTGTCTGGGCCCAGGGAGCCTCCTGGAG...GGCCACACAGCAGCAAGACTTGAGAGCAGAGTGCAGTGGAGGCTCACTCCCAGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102546.4 |
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| CDS-3UTR CCA 90 bp | ACTGGGAGTGAGCCTCCACTGCACTCTGCTCTCAAGTCTTGCTGCTGTGTGGCCCGGAGCGTAGGATGGTaGGGACAGTGTCTGCTGAGC | + |
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Preference number: 4 (lower is better) Translates to: TGSEPPLHSALKSCCCVARSVGW*GQCLLS Trigger: GCTCAGCAGACACTGTCCCCACCATCCTACGCTCCG...GGCCACACAGCAGCAAGACTTGAGAGCAGAGTGCAGTGGAGGCTCACTCCCAGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102546.4 |
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| CDS-3UTR CCA 90 bp | ATGCAACACCCCTCACCTCCTGATGGATTAAGGAGTCACTCCTGGGTGAAGCCTTTCTGGGTGATCCGCTaGCAGCCCGCCTTGGCCAGC | + |
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Preference number: 4 (lower is better) Translates to: MQHPSPPDGLRSHSWVKPFWVIR*QPALAS Trigger: GCTGGCCAAGGCGGGCTGCCAGCGGATCACCCAGAA...AGGCTTCACCCAGGAGTGACTCCTTAATCCATCAGGAGGTGAGGGGTGTTGCAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102546.4 |
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| CDS-3UTR CCA 90 bp | GTGAATGCCTCACTCTTGGTTGAGGGAGCTGGGTGGCTCTCCAGATTTCCCTGCCTTGGGAGTACTGGATaGGCTGAGGCAGACTGCTGG | + |
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Preference number: 4 (lower is better) Translates to: VNASLLVEGAGWLSRFPCLGSTG*AEADCW Trigger: CCAGCAGTCTGCCTCAGCCCATCCAGTACTCCCAAG...GCAGGGAAATCTGGAGAGCCACCCAGCTCCCTCAACCAAGAGTGAGGCATTCAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102546.4 |
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| CDS-3UTR TCA 90 bp | CAAGAACCTTCAGAGATGGTGAATGCCTCACTCTTGGTTGAGGGAGCTGGGTGGGATCAGTCATCTTTGTaGCTGGTGGGCCTCCCGCGC | + |
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Preference number: 4 (lower is better) Translates to: QEPSEMVNASLLVEGAGWDQSSL*LVGLPR Trigger: GCGCGGGAGGCCCACCAGTCACAAAGATGACTGATC...CCACCCAGCTCCCTCAACCAAGAGTGAGGCATTCACCATCTCTGAAGGTTCTTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102546.4 |
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| CDS-3UTR TCA 90 bp | GTGAATGCCTCACTCTTGGTTGAGGGAGCTGGGTGGCTCTCCAGATTTCCCTGCTCTGGTAGGTGTGGTTaGCGTGGAGCTCTAAGCGGT | + |
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Preference number: 4 (lower is better) Translates to: VNASLLVEGAGWLSRFPCSGRCG*RGALSG Trigger: ACCGCTTAGAGCTCCACGTCAACCACACCTACCAGA...GCAGGGAAATCTGGAGAGCCACCCAGCTCCCTCAACCAAGAGTGAGGCATTCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102546.4 |
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| CDS-3UTR TCA 90 bp | GCTGAAGTGCCTGTTACACTTGGTCCCCAGCTTCCAGTCCAAGAACCTTCAGAGACTGCCCTACGTAGGTaGGGTCAGACAGGCTCTGCC | + |
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Preference number: 4 (lower is better) Translates to: AEVPVTLGPQLPVQEPSETALRR*GQTGSA Trigger: GGCAGAGCCTGTCTGACCTCACCTACGTAGGGCAGT...CTCTGAAGGTTCTTGGACTGGAAGCTGGGGACCAAGTGTAACAGGCACTTCAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102546.4 |
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| CDS-3UTR GCA 90 bp | ATGCAACACCCCTCACCTCCTGATGGATTAAGGAGTCACTCCTGGGTGAAGCCTAGGTCAGACAGGCTCTaGCGCCACACAGCTCCAGGA | + |
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Preference number: 4 (lower is better) Translates to: MQHPSPPDGLRSHSWVKPRSDRL*RHTAPG Trigger: TCCTGGAGCTGTGTGGCGGCAGAGCCTGTCTGACCT...AGGCTTCACCCAGGAGTGACTCCTTAATCCATCAGGAGGTGAGGGGTGTTGCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102546.4 |
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| CDS-3UTR GCA 90 bp | CAAGAACCTTCAGAGATGGTGAATGCCTCACTCTTGGTTGAGGGAGCTGGGTGGGGGTGGCCCTCGATCTaGACAGAGGACAGGAGAGAC | + |
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Preference number: 4 (lower is better) Translates to: QEPSEMVNASLLVEGAGWGWPSI*TEDRRD Trigger: GTCTCTCCTGTCCTCTGTGCAGATCGAGGGCCACCC...CCACCCAGCTCCCTCAACCAAGAGTGAGGCATTCACCATCTCTGAAGGTTCTTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102546.4 |
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| 3UTR CAA 72 bp | CTGCTCTCAAGTCTTGCTGCTGTGTGGCCTCTGGCCTaGGCTGAAGTGCCTGTTACACTTGGTCCCCAGCTT | + |
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Preference number: 4 (lower is better) Translates to: LLSSLAAVWPLA*AEVPVTLGPQL Trigger: AAGCTGGGGACCAAGTGTAACAGGCACTTCAGCCAAGGCCAGAGGCCACACAGCAGCAAGACTTGAGAGCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102546.4 |
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| CDS-3UTR CCA 90 bp | ATGCAACACCCCTCACCTCCTGATGGATTAAGGAGTCACTCCTGGGTGAAGCCTCTTCGGAGCGTAGGATaGTGGGGACAGTGTCTGCTG | + |
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Preference number: 4 (lower is better) Translates to: MQHPSPPDGLRSHSWVKPLRSVG*WGQCLL Trigger: CAGCAGACACTGTCCCCACCATCCTACGCTCCGAAG...AGGCTTCACCCAGGAGTGACTCCTTAATCCATCAGGAGGTGAGGGGTGTTGCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102546.4 |
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| CDS-3UTR CCA 90 bp | TTTATGCAACACCCCTCACCTCCTGATGGATTAAGGAGTCACTCCTGGGTGAAGGGGAGGGAGACAGGGTaGCCCTCGATCTGCACAGAG | + |
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Preference number: 4 (lower is better) Translates to: FMQHPSPPDGLRSHSWVKGRETG*PSICTE Trigger: CTCTGTGCAGATCGAGGGCCACCCTGTCTCCCTCCC...CTTCACCCAGGAGTGACTCCTTAATCCATCAGGAGGTGAGGGGTGTTGCATAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102546.4 |
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| CDS-3UTR CCA 90 bp | ACCTTTATGCAACACCCCTCACCTCCTGATGGATTAAGGAGTCACTCCTGGGTGCAGAGGCTGCAGCACTaGGGCACATGGCCTCAGTCT | + |
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Preference number: 4 (lower is better) Translates to: TFMQHPSPPDGLRSHSWVQRLQH*GTWPQS Trigger: AGACTGAGGCCATGTGCCCCAGTGCTGCAGCCTCTG...CACCCAGGAGTGACTCCTTAATCCATCAGGAGGTGAGGGGTGTTGCATAAAGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102546.4 |
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| 3UTR CAA 72 bp | TGTGGCCTCTGGCCTTGGCTGAAGTGCCTGTTACACTaGGTCCCCAGCTTCCAGTCCAAGAACCTTCAGAGA | + |
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Preference number: 4 (lower is better) Translates to: CGLWPWLKCLLH*VPSFQSKNLQR Trigger: TCTCTGAAGGTTCTTGGACTGGAAGCTGGGGACCAAGTGTAACAGGCACTTCAGCCAAGGCCAGAGGCCACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102546.4 |
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| CDS-3UTR TCA 90 bp | GTGAATGCCTCACTCTTGGTTGAGGGAGCTGGGTGGCTCTCCAGATTTCCCTGCTGTGCTGCAGCGAGCTaGAACGATCAGTCATCTTTG | + |
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Preference number: 4 (lower is better) Translates to: VNASLLVEGAGWLSRFPCCAAAS*NDQSSL Trigger: CAAAGATGACTGATCGTTTCAGCTCGCTGCAGCACA...GCAGGGAAATCTGGAGAGCCACCCAGCTCCCTCAACCAAGAGTGAGGCATTCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102546.4 |
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| CDS-3UTR TCA 90 bp | TTTATGCAACACCCCTCACCTCCTGATGGATTAAGGAGTCACTCCTGGGTGAAGGACTGCTGGGGCCACTaGGGTCCAAGACAGGGATCA | + |
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Preference number: 4 (lower is better) Translates to: FMQHPSPPDGLRSHSWVKDCWGH*GPRQGS Trigger: TGATCCCTGTCTTGGACCTCAGTGGCCCCAGCAGTC...CTTCACCCAGGAGTGACTCCTTAATCCATCAGGAGGTGAGGGGTGTTGCATAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102546.4 |
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| CDS-3UTR CCA 90 bp | ACTGGGAGTGAGCCTCCACTGCACTCTGCTCTCAAGTCTTGCTGCTGTGTGGCCGAATGGACCTCACTTTaGGGATACAGGTCACATCAG | + |
|
Preference number: 4 (lower is better) Translates to: TGSEPPLHSALKSCCCVAEWTSL*GYRSHQ Trigger: CTGATGTGACCTGTATCCCCAAAGTGAGGTCCATTC...GGCCACACAGCAGCAAGACTTGAGAGCAGAGTGCAGTGGAGGCTCACTCCCAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102546.4 |
||
| CDS-3UTR CCA 90 bp | GCTGAAGTGCCTGTTACACTTGGTCCCCAGCTTCCAGTCCAAGAACCTTCAGAGCATAGGTGGCAGGCCTaGTCTTCATCCCCTGTTGTG | + |
|
Preference number: 4 (lower is better) Translates to: AEVPVTLGPQLPVQEPSEHRWQA*SSSPVV Trigger: CACAACAGGGGATGAAGACCAGGCCTGCCACCTATG...CTCTGAAGGTTCTTGGACTGGAAGCTGGGGACCAAGTGTAACAGGCACTTCAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102546.4 |
||
| CDS-3UTR CCA 90 bp | CAAGAACCTTCAGAGATGGTGAATGCCTCACTCTTGGTTGAGGGAGCTGGGTGGGTACCGTGGTGTCTCTaGTTCCTCACTGCGCAGTGT | + |
|
Preference number: 4 (lower is better) Translates to: QEPSEMVNASLLVEGAGWVPWCL*FLTAQC Trigger: ACACTGCGCAGTGAGGAACCAGAGACACCACGGTAC...CCACCCAGCTCCCTCAACCAAGAGTGAGGCATTCACCATCTCTGAAGGTTCTTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102546.4 |
||
| CDS-3UTR CCA 90 bp | GCTGAAGTGCCTGTTACACTTGGTCCCCAGCTTCCAGTCCAAGAACCTTCAGAGGGGACCCTCATCCTTTaGACACACAAGGGAGTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: AEVPVTLGPQLPVQEPSEGTLIL*THKGVQ Trigger: CTGGACTCCCTTGTGTGTCCAAAGGATGAGGGTCCC...CTCTGAAGGTTCTTGGACTGGAAGCTGGGGACCAAGTGTAACAGGCACTTCAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102546.4 |
||
| CDS-3UTR CCA 90 bp | ATGCAACACCCCTCACCTCCTGATGGATTAAGGAGTCACTCCTGGGTGAAGCCTGAGAGTCCAGTTCTGTaGACTGCTCCAGCTCAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: MQHPSPPDGLRSHSWVKPESPVL*TAPAQR Trigger: CCTCTGAGCTGGAGCAGTCCACAGAACTGGACTCTC...AGGCTTCACCCAGGAGTGACTCCTTAATCCATCAGGAGGTGAGGGGTGTTGCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102546.4 |
||
| 3UTR CAA 72 bp | GTCCAAGAACCTTCAGAGATGGTGAATGCCTCACTCTaGGTTGAGGGAGCTGGGTGGCTCTCCAGATTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: VQEPSEMVNASL*VEGAGWLSRFP Trigger: GGGAAATCTGGAGAGCCACCCAGCTCCCTCAACCAAGAGTGAGGCATTCACCATCTCTGAAGGTTCTTGGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102546.4 |
||
| CDS-3UTR TCA 90 bp | TGCTCCTTTCAAATGCTTTTCTCTGGACGCCTGACTGCAGAAAACCTTTATGCACCGAGAGGACCGGTGTaGGTGTGGGGTGGACCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: CSFQMLFSGRLTAENLYAPRGPV*VWGGPA Trigger: TGCTGGTCCACCCCACACTCACACCGGTCCTCTCGG...TGCATAAAGGTTTTCTGCAGTCAGGCGTCCAGAGAAAAGCATTTGAAAGGAGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000102546.4 |
||
| CDS-3UTR TCA 90 bp | ACTGGGAGTGAGCCTCCACTGCACTCTGCTCTCAAGTCTTGCTGCTGTGTGGCCCTTCACCTAAGGAGGTaGCTTTCTGTAGAGAAAGGT | + |
|
Preference number: 4 (lower is better) Translates to: TGSEPPLHSALKSCCCVALHLRR*LSVEKG Trigger: ACCTTTCTCTACAGAAAGTCACCTCCTTAGGTGAAG...GGCCACACAGCAGCAAGACTTGAGAGCAGAGTGCAGTGGAGGCTCACTCCCAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102546.4 |
||
| CDS-3UTR CCA 90 bp | TTTATGCAACACCCCTCACCTCCTGATGGATTAAGGAGTCACTCCTGGGTGAAGAGGTTGCAGAACTTCTaGGTGATCCGCTGGCAGCCC | + |
|
Preference number: 4 (lower is better) Translates to: FMQHPSPPDGLRSHSWVKRLQNF*VIRWQP Trigger: GGGCTGCCAGCGGATCACCCAGAAGTTCTGCAACCT...CTTCACCCAGGAGTGACTCCTTAATCCATCAGGAGGTGAGGGGTGTTGCATAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102546.4 |
||
| CDS-3UTR CCA 90 bp | TTTATGCAACACCCCTCACCTCCTGATGGATTAAGGAGTCACTCCTGGGTGAAGCAGTGTCTGCTGAGCTaGCACGTTGGTAGGTTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: FMQHPSPPDGLRSHSWVKQCLLS*HVGRLQ Trigger: CTGCAACCTACCAACGTGCCAGCTCAGCAGACACTG...CTTCACCCAGGAGTGACTCCTTAATCCATCAGGAGGTGAGGGGTGTTGCATAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102546.4 |
||
| CDS-3UTR CCA 90 bp | TTTATGCAACACCCCTCACCTCCTGATGGATTAAGGAGTCACTCCTGGGTGAAGCCCCTTCAGGTACCGTaGTGTCTCTGGTTCCTCACT | + |
|
Preference number: 4 (lower is better) Translates to: FMQHPSPPDGLRSHSWVKPLQVP*CLWFLT Trigger: AGTGAGGAACCAGAGACACCACGGTACCTGAAGGGG...CTTCACCCAGGAGTGACTCCTTAATCCATCAGGAGGTGAGGGGTGTTGCATAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102546.4 |
||
| CDS-3UTR TCA 90 bp | ACCTTTATGCAACACCCCTCACCTCCTGATGGATTAAGGAGTCACTCCTGGGTGTCGGAGTCAAAATTGTaGTGGAGCCGAGGAACTCTG | + |
|
Preference number: 4 (lower is better) Translates to: TFMQHPSPPDGLRSHSWVSESKL*WSRGTL Trigger: CAGAGTTCCTCGGCTCCATCACAATTTTGACTCCGA...CACCCAGGAGTGACTCCTTAATCCATCAGGAGGTGAGGGGTGTTGCATAAAGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102546.4 |
||
| CDS-3UTR TCA 90 bp | CAAGAACCTTCAGAGATGGTGAATGCCTCACTCTTGGTTGAGGGAGCTGGGTGGGTGTCTTCCTGGAGCTaGCCTTTTGTCTTGAGGTAT | + |
|
Preference number: 4 (lower is better) Translates to: QEPSEMVNASLLVEGAGWVSSWS*PFVLRY Trigger: ATACCTCAAGACAAAAGGTCAGCTCCAGGAAGACAC...CCACCCAGCTCCCTCAACCAAGAGTGAGGCATTCACCATCTCTGAAGGTTCTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102546.4 |
||
| CDS-3UTR GCA 90 bp | GCGCCATGCTCCTTTCAAATGCTTTTCTCTGGACGCCTGACTGCAGAAAACCTTCAGGTCCTCTGTCTGTaGAAAATCCCAGAGGTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: APCSFQMLFSGRLTAENLQVLCL*KIPEVR Trigger: CCTCACCTCTGGGATTTTGCACAGACAGAGGACCTG...AAGGTTTTCTGCAGTCAGGCGTCCAGAGAAAAGCATTTGAAAGGAGCATGGCGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000102546.4 |
||
| 3UTR CAA 72 bp | GTGCTACAAAGCAATTCCCAGACATTAATGCCATCCTaGGCACCACCCCAGAAGGTAAGTGTGATGACGCCC | + |
|
Preference number: 4 (lower is better) Translates to: VLQSNSQTLMPS*APPQKVSVMTP Trigger: GGGCGTCATCACACTTACCTTCTGGGGTGGTGCCAAGGATGGCATTAATGTCTGGGAATTGCTTTGTAGCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102546.4 |
||
| CDS-3UTR TCA 90 bp | ACCTTTATGCAACACCCCTCACCTCCTGATGGATTAAGGAGTCACTCCTGGGTGGCTGACCTTTTGTCTTaGGGTATTTGGGAGTGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: TFMQHPSPPDGLRSHSWVADLLS*GIWEWR Trigger: TCTCCACTCCCAAATACCTCAAGACAAAAGGTCAGC...CACCCAGGAGTGACTCCTTAATCCATCAGGAGGTGAGGGGTGTTGCATAAAGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102546.4 |
||
| CDS-3UTR GCA 90 bp | GCCATGCTCCTTTCAAATGCTTTTCTCTGGACGCCTGACTGCAGAAAACCTTTAGAGACAGAATGGACGTaGAAAGGGAGGGAGACAGGG | + |
|
Preference number: 4 (lower is better) Translates to: AMLLSNAFLWTPDCRKPLETEWT*KGRETG Trigger: CCCTGTCTCCCTCCCTTTGCACGTCCATTCTGTCTC...TAAAGGTTTTCTGCAGTCAGGCGTCCAGAGAAAAGCATTTGAAAGGAGCATGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102546.4 |
||
| CDS-3UTR GCA 90 bp | GCCATGCTCCTTTCAAATGCTTTTCTCTGGACGCCTGACTGCAGAAAACCTTTATCCAGTTCTGTGGACTaGTCCAGCTCAGAGGCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: AMLLSNAFLWTPDCRKPLSSSVD*SSSEAA Trigger: TGCAGCCTCTGAGCTGGAGCAGTCCACAGAACTGGA...TAAAGGTTTTCTGCAGTCAGGCGTCCAGAGAAAAGCATTTGAAAGGAGCATGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102546.4 |
||
| 3UTR CAA 72 bp | GAATGTGACCCCAGACAAGCCGAGATTCAAAAGCCTTaGGCTTCCAAGGCGCCATGCTCCTTTCAAATGCTT | + |
|
Preference number: 4 (lower is better) Translates to: ECDPRQAEIQKP*ASKAPCSFQML Trigger: AAGCATTTGAAAGGAGCATGGCGCCTTGGAAGCCAAAGGCTTTTGAATCTCGGCTTGTCTGGGGTCACATTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102546.4 |
||
| CDS-3UTR TCA 90 bp | TGCTCCTTTCAAATGCTTTTCTCTGGACGCCTGACTGCAGAAAACCTTTATGCATCACTGCGCAGTGTGTaGAGGTCAGGTCCTCTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: CSFQMLFSGRLTAENLYASLRSV*RSGPLS Trigger: AGACAGAGGACCTGACCTTCACACACTGCGCAGTGA...TGCATAAAGGTTTTCTGCAGTCAGGCGTCCAGAGAAAAGCATTTGAAAGGAGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102546.4 |
||
| CDS-3UTR GCA 90 bp | ACCTTTATGCAACACCCCTCACCTCCTGATGGATTAAGGAGTCACTCCTGGGTGCGTATTCTCTCTGTTTaGCTTCAAGGTGCATCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: TFMQHPSPPDGLRSHSWVRILSV*LQGASG Trigger: ACCAGATGCACCTTGAAGGCAAACAGAGAGAATACG...CACCCAGGAGTGACTCCTTAATCCATCAGGAGGTGAGGGGTGTTGCATAAAGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102546.4 |
||
| CDS-3UTR CCA 90 bp | GCCATGCTCCTTTCAAATGCTTTTCTCTGGACGCCTGACTGCAGAAAACCTTTAGGACCAGCATCTGAATaGACCTCACTTTGGGGATAC | + |
|
Preference number: 4 (lower is better) Translates to: AMLLSNAFLWTPDCRKPLGPASE*TSLWGY Trigger: GTATCCCCAAAGTGAGGTCCATTCAGATGCTGGTCC...TAAAGGTTTTCTGCAGTCAGGCGTCCAGAGAAAAGCATTTGAAAGGAGCATGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000102546.4 |
||
| CDS-3UTR TCA 90 bp | TGCTCCTTTCAAATGCTTTTCTCTGGACGCCTGACTGCAGAAAACCTTTATGCATCAGGGCCAAGCCTTTaGAAAGAGAGTCCAGTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: CSFQMLFSGRLTAENLYASGPSL*KESPVL Trigger: CAGAACTGGACTCTCTTTTCAAAGGCTTGGCCCTGA...TGCATAAAGGTTTTCTGCAGTCAGGCGTCCAGAGAAAAGCATTTGAAAGGAGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102546.4 |
||
| CDS-3UTR CCA 90 bp | GCGCCATGCTCCTTTCAAATGCTTTTCTCTGGACGCCTGACTGCAGAAAACCTTTGTTCTCAAAGTTGCTaGACTGGAATTTCACGTGTT | + |
|
Preference number: 4 (lower is better) Translates to: APCSFQMLFSGRLTAENLCSQSC*TGISRV Trigger: AACACGTGAAATTCCAGTCCAGCAACTTTGAGAACA...AAGGTTTTCTGCAGTCAGGCGTCCAGAGAAAAGCATTTGAAAGGAGCATGGCGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102546.4 |
||
| CDS CCA 90 bp | ACTGGGGCACATGGCCTCAGTCTCAACCGCGGGACCCTCATCCTTTaGACACACAAGGGAGTCCAGCAGGCCCCAGGGACTTGGTCCCTC | + |
|
Preference number: 5 (lower is better) Translates to: TGAHGLSLNRGTLIL*THKGVQQAPGTWSL Trigger: GAGGGACCAAGTCCCTGGGGCCTGCTGGACTCCCTTGTGTGTCCAAAGGATGAGGGTCCCGCGGTTGAGACTGAGGCCATGTGCCCCAGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102546.4 |
||
| CDS CCA 90 bp | GGGGAACATGAGACAGAATGGACGTGCAAAGGGAGGGAGACAGGGTaGCCCTCGATCTGCACAGAGGACAGGAGAGACAGCGCCCCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: GEHETEWTCKGRETG*PSICTEDRRDSAPF Trigger: GAAGGGGGCGCTGTCTCTCCTGTCCTCTGTGCAGATCGAGGGCCACCCTGTCTCCCTCCCTTTGCACGTCCATTCTGTCTCATGTTCCCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102546.4 |
||
| CDS CCA 90 bp | CCCCAGGGACTTGGTCCCTCGTCTGAGGGGGAACATGAGACAGAATaGACGTGCAAAGGGAGGGAGACAGGGTGGCCCTCGATCTGCACA | + |
|
Preference number: 5 (lower is better) Translates to: PQGLGPSSEGEHETE*TCKGRETGWPSICT Trigger: TGTGCAGATCGAGGGCCACCCTGTCTCCCTCCCTTTGCACGTCCATTCTGTCTCATGTTCCCCCTCAGACGAGGGACCAAGTCCCTGGGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102546.4 |
||
| CDS CCA 90 bp | GAGAGTCCAGTTCTGTGGACTGCTCCAGCTCAGAGGCTGCAGCACTaGGGCACATGGCCTCAGTCTCAACCGCGGGACCCTCATCCTTTG | + |
|
Preference number: 5 (lower is better) Translates to: ESPVLWTAPAQRLQH*GTWPQSQPRDPHPL Trigger: CAAAGGATGAGGGTCCCGCGGTTGAGACTGAGGCCATGTGCCCCAGTGCTGCAGCCTCTGAGCTGGAGCAGTCCACAGAACTGGACTCTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102546.4 |
||
| CDS-3UTR CAA 90 bp | GCTCTCCAGATTTCCCTGCATTACCCCACTCTGTGTGACCTGCCTGCTGGGCCCCGGGACCCTCATCCTTaGGACACACAAGGGAGTCCA | + |
|
Preference number: 5 (lower is better) Translates to: ALQISLHYPTLCDLPAGPRDPHP*DTQGSP Trigger: TGGACTCCCTTGTGTGTCCAAAGGATGAGGGTCCCG...GGGCCCAGCAGGCAGGTCACACAGAGTGGGGTAATGCAGGGAAATCTGGAGAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102546.4 |
||
| CDS TCA 90 bp | TCTCCTCCAGGGTTAGCTGGTGGCCATCTTCCGAGAGGACCGGTGTaGGTGTGGGGTGGACCAGCATCTGAATGGACCTCACTTTGGGGA | + |
|
Preference number: 5 (lower is better) Translates to: SPPGLAGGHLPRGPV*VWGGPASEWTSLWG Trigger: TCCCCAAAGTGAGGTCCATTCAGATGCTGGTCCACCCCACACTCACACCGGTCCTCTCGGAAGATGGCCACCAGCTAACCCTGGAGGAGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102546.4 |
||
| CDS TCA 90 bp | TGTCTGCTGAGCTGGCACGTTGGTAGGTTGCAGGATGGAGACATCTaGCTGCCCTACGTAGGTGAGGTCAGACAGGCTCTGCCGCCACAC | + |
|
Preference number: 5 (lower is better) Translates to: CLLSWHVGRLQDGDI*LPYVGEVRQALPPH Trigger: GTGTGGCGGCAGAGCCTGTCTGACCTCACCTACGTAGGGCAGTCAGATGTCTCCATCCTGCAACCTACCAACGTGCCAGCTCAGCAGACA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102546.4 |
||
| CDS GCA 90 bp | TTTGAAAAGAGAGTCCAGTTCTGTGGACTGCTCCAGCTCAGAGGCTaGAGCACTGGGGCACATGGCCTCAGTCTCAACCGCGGGACCCTC | + |
|
Preference number: 5 (lower is better) Translates to: FEKRVQFCGLLQLRG*STGAHGLSLNRGTL Trigger: GAGGGTCCCGCGGTTGAGACTGAGGCCATGTGCCCCAGTGCTGCAGCCTCTGAGCTGGAGCAGTCCACAGAACTGGACTCTCTTTTCAAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102546.4 |
||
| CDS-3UTR CAA 90 bp | CAAGAACCTTCAGAGATGGTGAATGCCTCACTCTTGGTTGAGGGAGCTGGGTGGCGCTGGCAGCCCGCCTaGGCCAGCCACTTTCTCTCT | + |
|
Preference number: 5 (lower is better) Translates to: QEPSEMVNASLLVEGAGWRWQPA*ASHFLS Trigger: AGAGAGAAAGTGGCTGGCCAAGGCGGGCTGCCAGCG...CCACCCAGCTCCCTCAACCAAGAGTGAGGCATTCACCATCTCTGAAGGTTCTTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102546.4 |
||
| CDS TCA 90 bp | CTGCGGGTCATAGGTGGCAGGCCTGGTCTTCATCCCCTGTTGTGGTaGGTAGAACAGAGCTTTGGCATCCGAGGCTACCTGAGGCGCATA | + |
|
Preference number: 5 (lower is better) Translates to: LRVIGGRPGLHPLLW*VEQSFGIRGYLRRI Trigger: TATGCGCCTCAGGTAGCCTCGGATGCCAAAGCTCTGTTCTACTCACCACAACAGGGGATGAAGACCAGGCCTGCCACCTATGACCCGCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102546.4 |
||
| CDS TCA 90 bp | CCCTTCAGGTACCGTGGTGTCTCTGGTTCCTCACTGCGCAGTGTGTaGAGGTCAGGTCCTCTGTCTGTGCAAAATCCCAGAGGTGAGGGG | + |
|
Preference number: 5 (lower is better) Translates to: PFRYRGVSGSSLRSV*RSGPLSVQNPRGEG Trigger: CCCCTCACCTCTGGGATTTTGCACAGACAGAGGACCTGACCTTCACACACTGCGCAGTGAGGAACCAGAGACACCACGGTACCTGAAGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102546.4 |
||
| CDS GCA 90 bp | ACAGTCAGGGCCAAGCCTTTGAAAAGAGAGTCCAGTTCTGTGGACTaGTCCAGCTCAGAGGCTGCAGCACTGGGGCACATGGCCTCAGTC | + |
|
Preference number: 5 (lower is better) Translates to: TVRAKPLKRESSSVD*SSSEAAALGHMASV Trigger: GACTGAGGCCATGTGCCCCAGTGCTGCAGCCTCTGAGCTGGAGCAGTCCACAGAACTGGACTCTCTTTTCAAAGGCTTGGCCCTGACTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102546.4 |
||
| CDS CCA 90 bp | AACTCAGTGTGGTTGCGGGTCTCCATAGTCAGGTTGCAGAACTTCTaGGTGATCCGCTGGCAGCCCGCCTTGGCCAGCCACTTTCTCTCT | + |
|
Preference number: 5 (lower is better) Translates to: NSVWLRVSIVRLQNF*VIRWQPALASHFLS Trigger: AGAGAGAAAGTGGCTGGCCAAGGCGGGCTGCCAGCGGATCACCCAGAAGTTCTGCAACCTGACTATGGAGACCCGCAACCACACTGAGTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102546.4 |
||
| CDS CCA 90 bp | AGTGTGCTGCAGCGAGCTGAAACGATCAGTCATCTTTGTGACTGGTaGGCCTCCCGCGCTGACCGCCGTGACCTTGGCGTAGTAAAACTC | + |
|
Preference number: 5 (lower is better) Translates to: SVLQRAETISHLCDW*ASRADRRDLGVVKL Trigger: GAGTTTTACTACGCCAAGGTCACGGCGGTCAGCGCGGGAGGCCCACCAGTCACAAAGATGACTGATCGTTTCAGCTCGCTGCAGCACACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102546.4 |
||
| CDS CCA 90 bp | GGTAGTGTGCTGCAGCGAGCTGAAACGATCAGTCATCTTTGTGACTaGTGGGCCTCCCGCGCTGACCGCCGTGACCTTGGCGTAGTAAAA | + |
|
Preference number: 5 (lower is better) Translates to: GSVLQRAETISHLCD*WASRADRRDLGVVK Trigger: TTTTACTACGCCAAGGTCACGGCGGTCAGCGCGGGAGGCCCACCAGTCACAAAGATGACTGATCGTTTCAGCTCGCTGCAGCACACTACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102546.4 |
||
| CDS TCA 90 bp | CCATCTTCCGAGAGGACCGGTGTGAGTGTGGGGTGGACCAGCATCTaGATGGACCTCACTTTGGGGATACAGGTCACATCAGGCGGTTTG | + |
|
Preference number: 5 (lower is better) Translates to: PSSERTGVSVGWTSI*MDLTLGIQVTSGGL Trigger: CAAACCGCCTGATGTGACCTGTATCCCCAAAGTGAGGTCCATTCAGATGCTGGTCCACCCCACACTCACACCGGTCCTCTCGGAAGATGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102546.4 |
||
| CDS CCA 90 bp | CAGGGCAGCTGTCCAGAATGTCCTGCGGGTCATAGGTGGCAGGCCTaGTCTTCATCCCCTGTTGTGGTGAGTAGAACAGAGCTTTGGCAT | + |
|
Preference number: 5 (lower is better) Translates to: QGSCPECPAGHRWQA*SSSPVVVSRTELWH Trigger: ATGCCAAAGCTCTGTTCTACTCACCACAACAGGGGATGAAGACCAGGCCTGCCACCTATGACCCGCAGGACATTCTGGACAGCTGCCCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102546.4 |
||
| CDS CCA 90 bp | TTGCGGGTCTCCATAGTCAGGTTGCAGAACTTCTGGGTGATCCGCTaGCAGCCCGCCTTGGCCAGCCACTTTCTCTCTCCGTATTTCTTA | + |
|
Preference number: 5 (lower is better) Translates to: LRVSIVRLQNFWVIR*QPALASHFLSPYFL Trigger: TAAGAAATACGGAGAGAGAAAGTGGCTGGCCAAGGCGGGCTGCCAGCGGATCACCCAGAAGTTCTGCAACCTGACTATGGAGACCCGCAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102546.4 |
||
| CDS CCA 90 bp | TGTATTTGTAGCCCAGATAACAGAGCAAGCCGACGAGGAAACCCATaGAAAAGAGCACGGCGCCCGAGAAGGAGTAGGCCCACGTCCGAT | + |
|
Preference number: 5 (lower is better) Translates to: CICSPDNRASRRGNP*KRARRPRRSRPTSD Trigger: ATCGGACGTGGGCCTACTCCTTCTCGGGCGCCGTGCTCTTTTCCATGGGTTTCCTCGTCGGCTTGCTCTGTTATCTGGGCTACAAATACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102546.4 |
||
| CDS CCA 90 bp | CATAAGAAGCAGGGCAGCTGTCCAGAATGTCCTGCGGGTCATAGGTaGCAGGCCTGGTCTTCATCCCCTGTTGTGGTGAGTAGAACAGAG | + |
|
Preference number: 5 (lower is better) Translates to: HKKQGSCPECPAGHR*QAWSSSPVVVSRTE Trigger: CTCTGTTCTACTCACCACAACAGGGGATGAAGACCAGGCCTGCCACCTATGACCCGCAGGACATTCTGGACAGCTGCCCTGCTTCTTATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102546.4 |
||
| CDS-3UTR CAA 90 bp | TGCTCCTTTCAAATGCTTTTCTCTGGACGCCTGACTGCAGAAAACCTTTATGCAGCAGGCCCCAGGGACTaGGTCCCTCGTCTGAGGGGG | + |
|
Preference number: 5 (lower is better) Translates to: CSFQMLFSGRLTAENLYAAGPRD*VPRLRG Trigger: CCCCCTCAGACGAGGGACCAAGTCCCTGGGGCCTGC...TGCATAAAGGTTTTCTGCAGTCAGGCGTCCAGAGAAAAGCATTTGAAAGGAGCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000102546.4 |
||
| CDS-3UTR CAA 90 bp | CACTCTTGGTTGAGGGAGCTGGGTGGCTCTCCAGATTTCCCTGCATTACCCCACGTCAGGGCCAAGCCTTaGAAAAGAGAGTCCAGTTCT | + |
|
Preference number: 5 (lower is better) Translates to: HSWLRELGGSPDFPALPHVRAKP*KRESSS Trigger: AGAACTGGACTCTCTTTTCAAAGGCTTGGCCCTGAC...GTGGGGTAATGCAGGGAAATCTGGAGAGCCACCCAGCTCCCTCAACCAAGAGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102546.4 |
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| CDS-3UTR CAA 90 bp | CCTTGGCTGAAGTGCCTGTTACACTTGGTCCCCAGCTTCCAGTCCAAGAACCTTGTGAGGGGAGTGATTTaGGTCTCTGTGTCTCCCCTT | + |
|
Preference number: 5 (lower is better) Translates to: PWLKCLLHLVPSFQSKNLVRGVI*VSVSPL Trigger: AAGGGGAGACACAGAGACCAAAATCACTCCCCTCAC...AAGGTTCTTGGACTGGAAGCTGGGGACCAAGTGTAACAGGCACTTCAGCCAAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000102546.4 |
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| CDS TCA 90 bp | ACACGTAGGGGGCACTTTCCTTGGACAATATCGGAGTCAAAATTGTaGTGGAGCCGAGGAACTCTGTGTCGGGAGTCAGGCCAAGGAACT | + |
|
Preference number: 5 (lower is better) Translates to: TRRGHFPWTISESKL*WSRGTLCRESGQGT Trigger: AGTTCCTTGGCCTGACTCCCGACACAGAGTTCCTCGGCTCCATCACAATTTTGACTCCGATATTGTCCAAGGAAAGTGCCCCCTACGTGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102546.4 |
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| CDS-3UTR CAA 90 bp | ATGCAACACCCCTCACCTCCTGATGGATTAAGGAGTCACTCCTGGGTGAAGCCTGTCTCCATAGTCAGGTaGCAGAACTTCTGGGTGATC | + |
|
Preference number: 5 (lower is better) Translates to: MQHPSPPDGLRSHSWVKPVSIVR*QNFWVI Trigger: GATCACCCAGAAGTTCTGCAACCTGACTATGGAGAC...AGGCTTCACCCAGGAGTGACTCCTTAATCCATCAGGAGGTGAGGGGTGTTGCAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102546.4 |
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| CDS TCA 90 bp | TCCAAGACAGGGATCAGTACGTGTTCTTGGATGAAGCGTAGGGGTTaGAAGGTCAGGACACGTTGGACGTTCAGGGAGTTAGGAGGTACA | + |
|
Preference number: 5 (lower is better) Translates to: SKTGISTCSWMKRRG*KVRTRWTFRELGGT Trigger: TGTACCTCCTAACTCCCTGAACGTCCAACGTGTCCTGACCTTTCAACCCCTACGCTTCATCCAAGAACACGTACTGATCCCTGTCTTGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102546.4 |
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| CDS-3UTR CAA 90 bp | CCTTGGCTGAAGTGCCTGTTACACTTGGTCCCCAGCTTCCAGTCCAAGAACCTTTTTGTCTTGAGGTATTaGGGAGTGGAGAGGATGCCT | + |
|
Preference number: 5 (lower is better) Translates to: PWLKCLLHLVPSFQSKNLFVLRY*GVERMP Trigger: AGGCATCCTCTCCACTCCCAAATACCTCAAGACAAA...AAGGTTCTTGGACTGGAAGCTGGGGACCAAGTGTAACAGGCACTTCAGCCAAGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102546.4 |
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| CDS CCA 90 bp | GAGCTGACCTTTTGTCTTGAGGTATTTGGGAGTGGAGAGGATGCCTaGGGTAGAGTCTTTGCCAGAGTCTTCCACACACACAGCATAAGA | + |
|
Preference number: 5 (lower is better) Translates to: ELTFCLEVFGSGEDA*GRVFARVFHTHSIR Trigger: TCTTATGCTGTGTGTGTGGAAGACTCTGGCAAAGACTCTACCCCAGGCATCCTCTCCACTCCCAAATACCTCAAGACAAAAGGTCAGCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102546.4 |
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| CDS-3UTR CAA 90 bp | GCGCCATGCTCCTTTCAAATGCTTTTCTCTGGACGCCTGACTGCAGAAAACCTTCTGGAATTTCACGTGTaGAAGGAGACCGGATGTGTC | + |
|
Preference number: 5 (lower is better) Translates to: APCSFQMLFSGRLTAENLLEFHV*KETGCV Trigger: GACACATCCGGTCTCCTTCAACACGTGAAATTCCAG...AAGGTTTTCTGCAGTCAGGCGTCCAGAGAAAAGCATTTGAAAGGAGCATGGCGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102546.4 |
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| CDS-3UTR CAA 90 bp | ACCTTTATGCAACACCCCTCACCTCCTGATGGATTAAGGAGTCACTCCTGGGTGTCGTATTCTCTCTGTTaGCCTTCAAGGTGCATCTGG | + |
|
Preference number: 5 (lower is better) Translates to: TFMQHPSPPDGLRSHSWVSYSLC*PSRCIW Trigger: CCAGATGCACCTTGAAGGCAAACAGAGAGAATACGA...CACCCAGGAGTGACTCCTTAATCCATCAGGAGGTGAGGGGTGTTGCATAAAGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102546.4 |
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| CDS TCA 90 bp | CGTATTCTCTCTGTTTGCCTTCAAGGTGCATCTGGTAGGTGTGGTTaGCGTGGAGCTCTAAGCGGTAGAACAGGTCATGGAAAATCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: RILSVCLQGASGRCG*RGALSGRTGHGKSP Trigger: AGGAGATTTTCCATGACCTGTTCTACCGCTTAGAGCTCCACGTCAACCACACCTACCAGATGCACCTTGAAGGCAAACAGAGAGAATACG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102546.4 |
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| CDS CCA 72 bp | GGGCTGGACCTCAGGGACAGCCTTCGGAGCGTAGGATaGTGGGGACAGTGTCTGCTGAGCTGGCACGTTGGT | + |
|
Preference number: 6 (lower is better) Translates to: GLDLRDSLRSVG*WGQCLLSWHVG Trigger: ACCAACGTGCCAGCTCAGCAGACACTGTCCCCACCATCCTACGCTCCGAAGGCTGTCCCTGAGGTCCAGCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102546.4 |
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| CDS CCA 72 bp | GTTCTGTGGACTGCTCCAGCTCAGAGGCTGCAGCACTaGGGCACATGGCCTCAGTCTCAACCGCGGGACCCT | + |
|
Preference number: 6 (lower is better) Translates to: VLWTAPAQRLQH*GTWPQSQPRDP Trigger: AGGGTCCCGCGGTTGAGACTGAGGCCATGTGCCCCAGTGCTGCAGCCTCTGAGCTGGAGCAGTCCACAGAAC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102546.4 |
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| CDS TCA 72 bp | GGCCCAGACACCACCACTTGGGAGTACTGGATGGGCTaGGGCAGACTGCTGGGGCCACTGAGGTCCAAGACA | + |
|
Preference number: 6 (lower is better) Translates to: GPDTTTWEYWMG*GRLLGPLRSKT Trigger: TGTCTTGGACCTCAGTGGCCCCAGCAGTCTGCCTCAGCCCATCCAGTACTCCCAAGTGGTGGTGTCTGGGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102546.4 |
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| CDS CCA 72 bp | TGGTTGCGGGTCTCCATAGTCAGGTTGCAGAACTTCTaGGTGATCCGCTGGCAGCCCGCCTTGGCCAGCCAC | + |
|
Preference number: 6 (lower is better) Translates to: WLRVSIVRLQNF*VIRWQPALASH Trigger: GTGGCTGGCCAAGGCGGGCTGCCAGCGGATCACCCAGAAGTTCTGCAACCTGACTATGGAGACCCGCAACCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102546.4 |
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| CDS CCA 72 bp | CTGCAGCGAGCTGAAACGATCAGTCATCTTTGTGACTaGTGGGCCTCCCGCGCTGACCGCCGTGACCTTGGC | + |
|
Preference number: 6 (lower is better) Translates to: LQRAETISHLCD*WASRADRRDLG Trigger: GCCAAGGTCACGGCGGTCAGCGCGGGAGGCCCACCAGTCACAAAGATGACTGATCGTTTCAGCTCGCTGCAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102546.4 |
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| CDS CCA 72 bp | CTGGACCTCAGGGACAGCCTTCGGAGCGTAGGATGGTaGGGACAGTGTCTGCTGAGCTGGCACGTTGGTAGG | + |
|
Preference number: 6 (lower is better) Translates to: LDLRDSLRSVGW*GQCLLSWHVGR Trigger: CCTACCAACGTGCCAGCTCAGCAGACACTGTCCCCACCATCCTACGCTCCGAAGGCTGTCCCTGAGGTCCAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102546.4 |
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| CDS CCA 72 bp | ACTGCTCCAGCTCAGAGGCTGCAGCACTGGGGCACATaGCCTCAGTCTCAACCGCGGGACCCTCATCCTTTG | + |
|
Preference number: 6 (lower is better) Translates to: TAPAQRLQHWGT*PQSQPRDPHPL Trigger: CAAAGGATGAGGGTCCCGCGGTTGAGACTGAGGCCATGTGCCCCAGTGCTGCAGCCTCTGAGCTGGAGCAGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102546.4 |
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| CDS CCA 72 bp | CAGCGAGCTGAAACGATCAGTCATCTTTGTGACTGGTaGGCCTCCCGCGCTGACCGCCGTGACCTTGGCGTA | + |
|
Preference number: 6 (lower is better) Translates to: QRAETISHLCDW*ASRADRRDLGV Trigger: TACGCCAAGGTCACGGCGGTCAGCGCGGGAGGCCCACCAGTCACAAAGATGACTGATCGTTTCAGCTCGCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102546.4 |
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| CDS CCA 72 bp | CTTGGTCCCTCGTCTGAGGGGGAACATGAGACAGAATaGACGTGCAAAGGGAGGGAGACAGGGTGGCCCTCG | + |
|
Preference number: 6 (lower is better) Translates to: LGPSSEGEHETE*TCKGRETGWPS Trigger: CGAGGGCCACCCTGTCTCCCTCCCTTTGCACGTCCATTCTGTCTCATGTTCCCCCTCAGACGAGGGACCAAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102546.4 |
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| CDS TCA 72 bp | GGGTTAGCTGGTGGCCATCTTCCGAGAGGACCGGTGTaGGTGTGGGGTGGACCAGCATCTGAATGGACCTCA | + |
|
Preference number: 6 (lower is better) Translates to: GLAGGHLPRGPV*VWGGPASEWTS Trigger: TGAGGTCCATTCAGATGCTGGTCCACCCCACACTCACACCGGTCCTCTCGGAAGATGGCCACCAGCTAACCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102546.4 |
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| CDS TCA 72 bp | GTTGCAGGATGGAGACATCTGACTGCCCTACGTAGGTaGGGTCAGACAGGCTCTGCCGCCACACAGCTCCAG | + |
|
Preference number: 6 (lower is better) Translates to: VAGWRHLTALRR*GQTGSAATQLQ Trigger: CTGGAGCTGTGTGGCGGCAGAGCCTGTCTGACCTCACCTACGTAGGGCAGTCAGATGTCTCCATCCTGCAAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102546.4 |
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| CDS CCA 72 bp | TCCATAGTCAGGTTGCAGAACTTCTGGGTGATCCGCTaGCAGCCCGCCTTGGCCAGCCACTTTCTCTCTCCG | + |
|
Preference number: 6 (lower is better) Translates to: SIVRLQNFWVIR*QPALASHFLSP Trigger: CGGAGAGAGAAAGTGGCTGGCCAAGGCGGGCTGCCAGCGGATCACCCAGAAGTTCTGCAACCTGACTATGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102546.4 |
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| CDS CCA 72 bp | AGCCCAGATAACAGAGCAAGCCGACGAGGAAACCCATaGAAAAGAGCACGGCGCCCGAGAAGGAGTAGGCCC | + |
|
Preference number: 6 (lower is better) Translates to: SPDNRASRRGNP*KRARRPRRSRP Trigger: GGGCCTACTCCTTCTCGGGCGCCGTGCTCTTTTCCATGGGTTTCCTCGTCGGCTTGCTCTGTTATCTGGGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102546.4 |
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| CDS CCA 72 bp | CAGGGCAGCTGTCCAGAATGTCCTGCGGGTCATAGGTaGCAGGCCTGGTCTTCATCCCCTGTTGTGGTGAGT | + |
|
Preference number: 6 (lower is better) Translates to: QGSCPECPAGHR*QAWSSSPVVVS Trigger: ACTCACCACAACAGGGGATGAAGACCAGGCCTGCCACCTATGACCCGCAGGACATTCTGGACAGCTGCCCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102546.4 |
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| CDS CCA 72 bp | AGAGGACAGGAGAGACAGCGCCCCCTTCAGGTACCGTaGTGTCTCTGGTTCCTCACTGCGCAGTGTGTGAAG | + |
|
Preference number: 6 (lower is better) Translates to: RGQERQRPLQVP*CLWFLTAQCVK Trigger: CTTCACACACTGCGCAGTGAGGAACCAGAGACACCACGGTACCTGAAGGGGGCGCTGTCTCTCCTGTCCTCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102546.4 |
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| CDS CCA 72 bp | GAGACAGAATGGACGTGCAAAGGGAGGGAGACAGGGTaGCCCTCGATCTGCACAGAGGACAGGAGAGACAGC | + |
|
Preference number: 6 (lower is better) Translates to: ETEWTCKGRETG*PSICTEDRRDS Trigger: GCTGTCTCTCCTGTCCTCTGTGCAGATCGAGGGCCACCCTGTCTCCCTCCCTTTGCACGTCCATTCTGTCTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102546.4 |
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| CDS CCA 72 bp | ATTTCACGTGTTGAAGGAGACCGGATGTGTCCACAGTaGTGTGAGCGGCCAGGGATCCCACCGTCAGGATGG | + |
|
Preference number: 6 (lower is better) Translates to: ISRVEGDRMCPQ*CERPGIPPSGW Trigger: CCATCCTGACGGTGGGATCCCTGGCCGCTCACACCACTGTGGACACATCCGGTCTCCTTCAACACGTGAAAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102546.4 |
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| CDS TCA 72 bp | AGCTGGCACGTTGGTAGGTTGCAGGATGGAGACATCTaGCTGCCCTACGTAGGTGAGGTCAGACAGGCTCTG | + |
|
Preference number: 6 (lower is better) Translates to: SWHVGRLQDGDI*LPYVGEVRQAL Trigger: CAGAGCCTGTCTGACCTCACCTACGTAGGGCAGTCAGATGTCTCCATCCTGCAACCTACCAACGTGCCAGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102546.4 |
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| CDS CCA 72 bp | AACAGGTCATGGAAAATCTCCTCCAGGGTTAGCTGGTaGCCATCTTCCGAGAGGACCGGTGTGAGTGTGGGG | + |
|
Preference number: 6 (lower is better) Translates to: NRSWKISSRVSW*PSSERTGVSVG Trigger: CCCCACACTCACACCGGTCCTCTCGGAAGATGGCCACCAGCTAACCCTGGAGGAGATTTTCCATGACCTGTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102546.4 |
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| CDS TCA 72 bp | GAGAGGACCGGTGTGAGTGTGGGGTGGACCAGCATCTaGATGGACCTCACTTTGGGGATACAGGTCACATCA | + |
|
Preference number: 6 (lower is better) Translates to: ERTGVSVGWTSI*MDLTLGIQVTS Trigger: TGATGTGACCTGTATCCCCAAAGTGAGGTCCATTCAGATGCTGGTCCACCCCACACTCACACCGGTCCTCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102546.4 |
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| CDS TCA 72 bp | ATAGGTGGCAGGCCTGGTCTTCATCCCCTGTTGTGGTaGGTAGAACAGAGCTTTGGCATCCGAGGCTACCTG | + |
|
Preference number: 6 (lower is better) Translates to: IGGRPGLHPLLW*VEQSFGIRGYL Trigger: CAGGTAGCCTCGGATGCCAAAGCTCTGTTCTACTCACCACAACAGGGGATGAAGACCAGGCCTGCCACCTAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102546.4 |
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| CDS CCA 72 bp | TCTTCATCCCCTGTTGTGGTGAGTAGAACAGAGCTTTaGCATCCGAGGCTACCTGAGGCGCATAGGAAGGGG | + |
|
Preference number: 6 (lower is better) Translates to: SSSPVVVSRTEL*HPRLPEAHRKG Trigger: CCCCTTCCTATGCGCCTCAGGTAGCCTCGGATGCCAAAGCTCTGTTCTACTCACCACAACAGGGGATGAAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102546.4 |
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| CDS TCA 72 bp | TACCGTGGTGTCTCTGGTTCCTCACTGCGCAGTGTGTaGAGGTCAGGTCCTCTGTCTGTGCAAAATCCCAGA | + |
|
Preference number: 6 (lower is better) Translates to: YRGVSGSSLRSV*RSGPLSVQNPR Trigger: TCTGGGATTTTGCACAGACAGAGGACCTGACCTTCACACACTGCGCAGTGAGGAACCAGAGACACCACGGTA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102546.4 |
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| CDS GCA 72 bp | CGGGCCCACCATCCCACGTCAAGATGTTCTCAAAGTTaGTGGACTGGAATTTCACGTGTTGAAGGAGACCGG | + |
|
Preference number: 6 (lower is better) Translates to: RAHHPTSRCSQS*WTGISRVEGDR Trigger: CCGGTCTCCTTCAACACGTGAAATTCCAGTCCAGCAACTTTGAGAACATCTTGACGTGGGATGGTGGGCCCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102546.4 |
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| CDS TCA 72 bp | GGGCACTTTCCTTGGACAATATCGGAGTCAAAATTGTaGTGGAGCCGAGGAACTCTGTGTCGGGAGTCAGGC | + |
|
Preference number: 6 (lower is better) Translates to: GHFPWTISESKL*WSRGTLCRESG Trigger: GCCTGACTCCCGACACAGAGTTCCTCGGCTCCATCACAATTTTGACTCCGATATTGTCCAAGGAAAGTGCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102546.4 |
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| CDS CAA 72 bp | TTGCAGAACTTCTGGGTGATCCGCTGGCAGCCCGCCTaGGCCAGCCACTTTCTCTCTCCGTATTTCTTATAT | + |
|
Preference number: 6 (lower is better) Translates to: LQNFWVIRWQPA*ASHFLSPYFLY Trigger: ATATAAGAAATACGGAGAGAGAAAGTGGCTGGCCAAGGCGGGCTGCCAGCGGATCACCCAGAAGTTCTGCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102546.4 |
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| CDS CAA 72 bp | GACCTCACTTTGGGGATACAGGTCACATCAGGCGGTTaGATGGTAGTGTGCTGCAGCGAGCTGAAACGATCA | + |
|
Preference number: 6 (lower is better) Translates to: DLTLGIQVTSGG*MVVCCSELKRS Trigger: TGATCGTTTCAGCTCGCTGCAGCACACTACCATCAAACCGCCTGATGTGACCTGTATCCCCAAAGTGAGGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102546.4 |
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| CDS CAA 90 bp | ATAGTCAGGTTGCAGAACTTCTGGGTGATCCGCTGGCAGCCCGCCTaGGCCAGCCACTTTCTCTCTCCGTATTTCTTATATTCCACACTG | + |
|
Preference number: 6 (lower is better) Translates to: IVRLQNFWVIRWQPA*ASHFLSPYFLYSTL Trigger: CAGTGTGGAATATAAGAAATACGGAGAGAGAAAGTGGCTGGCCAAGGCGGGCTGCCAGCGGATCACCCAGAAGTTCTGCAACCTGACTAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102546.4 |
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| CDS TCA 72 bp | TCTGTTTGCCTTCAAGGTGCATCTGGTAGGTGTGGTTaGCGTGGAGCTCTAAGCGGTAGAACAGGTCATGGA | + |
|
Preference number: 6 (lower is better) Translates to: SVCLQGASGRCG*RGALSGRTGHG Trigger: TCCATGACCTGTTCTACCGCTTAGAGCTCCACGTCAACCACACCTACCAGATGCACCTTGAAGGCAAACAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102546.4 |
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| CDS TCA 72 bp | GGGATCAGTACGTGTTCTTGGATGAAGCGTAGGGGTTaGAAGGTCAGGACACGTTGGACGTTCAGGGAGTTA | + |
|
Preference number: 6 (lower is better) Translates to: GISTCSWMKRRG*KVRTRWTFREL Trigger: TAACTCCCTGAACGTCCAACGTGTCCTGACCTTTCAACCCCTACGCTTCATCCAAGAACACGTACTGATCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102546.4 |
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| CDS TCA 72 bp | GGGAGACAGCTTCTAACAAGTGTGTCTTCCTGGAGCTaGCCTTTTGTCTTGAGGTATTTGGGAGTGGAGAGG | + |
|
Preference number: 6 (lower is better) Translates to: GRQLLTSVSSWS*PFVLRYLGVER Trigger: CCTCTCCACTCCCAAATACCTCAAGACAAAAGGTCAGCTCCAGGAAGACACACTTGTTAGAAGCTGTCTCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102546.4 |
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| CDS CCA 72 bp | GACACGTTGGACGTTCAGGGAGTTAGGAGGTACAGGTaGCTTGGTGATGTATTTGTAGCCCAGATAACAGAG | + |
|
Preference number: 6 (lower is better) Translates to: DTLDVQGVRRYR*LGDVFVAQITE Trigger: CTCTGTTATCTGGGCTACAAATACATCACCAAGCCACCTGTACCTCCTAACTCCCTGAACGTCCAACGTGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102546.4 |
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| CDS CCA 72 bp | TTTTGTCTTGAGGTATTTGGGAGTGGAGAGGATGCCTaGGGTAGAGTCTTTGCCAGAGTCTTCCACACACAC | + |
|
Preference number: 6 (lower is better) Translates to: FCLEVFGSGEDA*GRVFARVFHTH Trigger: GTGTGTGTGGAAGACTCTGGCAAAGACTCTACCCCAGGCATCCTCTCCACTCCCAAATACCTCAAGACAAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102546.4 |
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| CDS CAA 72 bp | GATGTTCTCAAAGTTGCTGGACTGGAATTTCACGTGTaGAAGGAGACCGGATGTGTCCACAGTGGTGTGAGC | + |
|
Preference number: 6 (lower is better) Translates to: DVLKVAGLEFHV*KETGCVHSGVS Trigger: GCTCACACCACTGTGGACACATCCGGTCTCCTTCAACACGTGAAATTCCAGTCCAGCAACTTTGAGAACATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102546.4 |
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