Pregenerated sensors for IL21R (Mus musculus)
Ensembl gene IDs: ENSMUSG00000030745Ensembl transcript IDs: ENSMUST00000033000.8, ENSMUST00000206103.2, ENSMUST00000206234.2
Found 170 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TATGCTAGCTGCTCTGGGCTCCACTGTCCACAGGTGGAGGGGTCCTaGCCACCCACTGGCGGAGATAGCTTCGAGGGGGTCCTTCATCAG | + |
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Preference number: 1 (lower is better) Translates to: YASCSGLHCPQVEGS*PPTGGDSFEGVLHQ Trigger: CTGATGAAGGACCCCCTCGAAGCTATCTCCGCCAGTGGGTGGTCAGGACCCCTCCACCTGTGGACAGTGGAGCCCAGAGCAGCTAGCATA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000206103.2 |
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| 3UTR CCA 90 bp | GCTGGTTATTATATGCTAGCTGCTCTGGGCTCCACTGTCCACAGGTaGAGGGGTCCTGACCACCCACTGGCGGAGATAGCTTCGAGGGGG | + |
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Preference number: 1 (lower is better) Translates to: AGYYMLAALGSTVHR*RGPDHPLAEIASRG Trigger: CCCCCTCGAAGCTATCTCCGCCAGTGGGTGGTCAGGACCCCTCCACCTGTGGACAGTGGAGCCCAGAGCAGCTAGCATATAATAACCAGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206103.2 |
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| 3UTR TCA 90 bp | ACAGCCTCAACCTGTCCAGTAGGCTGCCTGGGGAGCCTCCAAGCCTaGGACCACTACCTGAGACACAGCCGCAAGACAGAAAAGCAGGGT | + |
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Preference number: 1 (lower is better) Translates to: TASTCPVGCLGSLQA*DHYLRHSRKTEKQG Trigger: ACCCTGCTTTTCTGTCTTGCGGCTGTGTCTCAGGTAGTGGTCTCAGGCTTGGAGGCTCCCCAGGCAGCCTACTGGACAGGTTGAGGCTGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000206103.2 |
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| 3UTR TCA 90 bp | GCTTCGAGGGGGTCCTTCATCAGTCTCCACGGGGCTGCCACAGTCTaGACCTGCAAAGCCACTGTCAAATGTGTCCATGTCCAGACCAGG | + |
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Preference number: 1 (lower is better) Translates to: ASRGSFISLHGAATV*TCKATVKCVHVQTR Trigger: CCTGGTCTGGACATGGACACATTTGACAGTGGCTTTGCAGGTTCAGACTGTGGCAGCCCCGTGGAGACTGATGAAGGACCCCCTCGAAGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000206103.2 |
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| 3UTR TCA 90 bp | GCCGCAAGACAGAAAAGCAGGGTCTGTGACCAAGAGCAGATCCTCTaGATTAGGGCCAGACTCTCGGCCAGCATCCAGGTTCATGGCTGG | + |
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Preference number: 1 (lower is better) Translates to: AARQKSRVCDQEQIL*IRARLSASIQVHGW Trigger: CCAGCCATGAACCTGGATGCTGGCCGAGAGTCTGGCCCTAATTCAGAGGATCTGCTCTTGGTCACAGACCCTGCTTTTCTGTCTTGCGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206103.2 |
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| 3UTR GCA 90 bp | GGCGGAGATAGCTTCGAGGGGGTCCTTCATCAGTCTCCACGGGGCTaGCACAGTCTGAACCTGCAAAGCCACTGTCAAATGTGTCCATGT | + |
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Preference number: 1 (lower is better) Translates to: GGDSFEGVLHQSPRG*HSLNLQSHCQMCPC Trigger: ACATGGACACATTTGACAGTGGCTTTGCAGGTTCAGACTGTGGCAGCCCCGTGGAGACTGATGAAGGACCCCCTCGAAGCTATCTCCGCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000206103.2 |
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| 3UTR TCA 90 bp | CCACTGAGATCAGCTTGGTCACCGGCCTCACAGCATAGGGGTCTCTaGGGTTCCGATACTGCAGCTCATATTGTAGCTTGCCCCTCAGCA | + |
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Preference number: 1 (lower is better) Translates to: PLRSAWSPASQHRGL*GSDTAAHIVACPSA Trigger: TGCTGAGGGGCAAGCTACAATATGAGCTGCAGTATCGGAACCTCAGAGACCCCTATGCTGTGAGGCCGGTGACCAAGCTGATCTCAGTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000206234.2 |
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| 3UTR GCA 90 bp | GGTGTGCTACAGGTTCCCTATCCTGACACCACATGCTCTCTTCAGTaGCTTCTGCCAATGTTGGGTTTGCGCATCAGGGCTGGCAGACAC | + |
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Preference number: 1 (lower is better) Translates to: GVLQVPYPDTTCSLQ*LLPMLGLRIRAGRH Trigger: GTGTCTGCCAGCCCTGATGCGCAAACCCAACATTGGCAGAAGGCACTGAAGAGAGCATGTGGTGTCAGGATAGGGAACCTGTAGCACACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206234.2 |
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| 3UTR TCA 90 bp | ACACAAGATCAGCAGCAACAGCACACAGCAGGCAGCAGTGCTGAGTaGACTTCAGGGGTAAGGAAGGGATGTGTGGCCTGCTCTGAAATG | + |
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Preference number: 1 (lower is better) Translates to: TQDQQQQHTAGSSAE*TSGVRKGCVACSEM Trigger: CATTTCAGAGCAGGCCACACATCCCTTCCTTACCCCTGAAGTTCACTCAGCACTGCTGCCTGCTGTGTGCTGTTGCTGCTGATCTTGTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206234.2 |
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| 3UTR GCA 90 bp | GCTAACCTCCATGGTGTGCTACAGGTTCCCTATCCTGACACCACATaGTCTCTTCAGTGCCTTCTGCCAATGTTGGGTTTGCGCATCAGG | + |
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Preference number: 1 (lower is better) Translates to: ANLHGVLQVPYPDTT*SLQCLLPMLGLRIR Trigger: CCTGATGCGCAAACCCAACATTGGCAGAAGGCACTGAAGAGAGCATGTGGTGTCAGGATAGGGAACCTGTAGCACACCATGGAGGTTAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206234.2 |
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| 3UTR GCA 90 bp | GGCTTTGACAAATACTGGAGGTCACCCCTAATCTACTCTTCTAACTaGTGGCCTGGCCACCTCCTCACCAGTGTACCCCAGATACTTGCT | + |
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Preference number: 1 (lower is better) Translates to: GFDKYWRSPLIYSSN*WPGHLLTSVPQILA Trigger: AGCAAGTATCTGGGGTACACTGGTGAGGAGGTGGCCAGGCCAGCAGTTAGAAGAGTAGATTAGGGGTGACCTCCAGTATTTGTCAAAGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033000.8 |
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| 3UTR GCA 90 bp | TACAGGTTCCCTATCCTGACACCACATGCTCTCTTCAGTGCCTTCTaGCAATGTTGGGTTTGCGCATCAGGGCTGGCAGACACTTTGAAA | + |
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Preference number: 1 (lower is better) Translates to: YRFPILTPHALFSAF*QCWVCASGLADTLK Trigger: TTTCAAAGTGTCTGCCAGCCCTGATGCGCAAACCCAACATTGGCAGAAGGCACTGAAGAGAGCATGTGGTGTCAGGATAGGGAACCTGTA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206234.2 |
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| 3UTR CCA 90 bp | TCCGATACTGCAGCTCATATTGTAGCTTGCCCCTCAGCACGTAGTTaGAGGGTTCGTCATAAGCTGAGTCCCAGGAGATATCATAGCGTC | + |
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Preference number: 1 (lower is better) Translates to: SDTAAHIVACPSARS*RVRHKLSPRRYHSV Trigger: GACGCTATGATATCTCCTGGGACTCAGCTTATGACGAACCCTCCAACTACGTGCTGAGGGGCAAGCTACAATATGAGCTGCAGTATCGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206234.2 |
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| 3UTR CCA 90 bp | ACCCTAGGAAACCCTAGGCACCCAGCTCATGCCCCCAGAGCCACCTaGTTTGCCCACCTTAACTCTAAGTTGGAAATACATCATGATGTT | + |
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Preference number: 1 (lower is better) Translates to: TLGNPRHPAHAPRAT*FAHLNSKLEIHHDV Trigger: AACATCATGATGTATTTCCAACTTAGAGTTAAGGTGGGCAAACCAGGTGGCTCTGGGGGCATGAGCTGGGTGCCTAGGGTTTCCTAGGGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000206234.2 |
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| 3UTR TCA 90 bp | TGCCAATGTTGGGTTTGCGCATCAGGGCTGGCAGACACTTTGAAATaGATGACAGTAGTGGCAGCTGTACTTGGGATGTATTGTGGGGTA | + |
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Preference number: 1 (lower is better) Translates to: CQCWVCASGLADTLK*MTVVAAVLGMYCGV Trigger: TACCCCACAATACATCCCAAGTACAGCTGCCACTACTGTCATTCATTTCAAAGTGTCTGCCAGCCCTGATGCGCAAACCCAACATTGGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206234.2 |
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| 3UTR CCA 90 bp | CTCATGCCCCCAGAGCCACCTGGTTTGCCCACCTTAACTCTAAGTTaGAAATACATCATGATGTTTAAGTCTAAGAGCAACCCCACACCT | + |
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Preference number: 1 (lower is better) Translates to: LMPPEPPGLPTLTLS*KYIMMFKSKSNPTP Trigger: AGGTGTGGGGTTGCTCTTAGACTTAAACATCATGATGTATTTCCAACTTAGAGTTAAGGTGGGCAAACCAGGTGGCTCTGGGGGCATGAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000206234.2 |
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| 3UTR CCA 90 bp | GCTGGCAGACACTTTGAAATGAATGACAGTAGTGGCAGCTGTACTTaGGATGTATTGTGGGGTAGGACAAGTCCTTCCCAGGTAAGACTT | + |
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Preference number: 1 (lower is better) Translates to: AGRHFEMNDSSGSCT*DVLWGRTSPSQVRL Trigger: AAGTCTTACCTGGGAAGGACTTGTCCTACCCCACAATACATCCCAAGTACAGCTGCCACTACTGTCATTCATTTCAAAGTGTCTGCCAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206234.2 |
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| 3UTR-3UTR TCA 90 bp | CAGAGCCCCCTCCTGGGGACCCAGTTCTCCAGGTTGGGTCTGCTGTCCAGTCCCGGGAGCCTCCAAGCCTaGGACCACTACCTGAGACAC | + |
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Preference number: 2 (lower is better) Translates to: QSPLLGTQFSRLGLLSSPGSLQA*DHYLRH Trigger: GTGTCTCAGGTAGTGGTCTCAGGCTTGGAGGCTCCC...GGGACTGGACAGCAGACCCAACCTGGAGAACTGGGTCCCCAGGAGGGGGCTCTG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000206103.2 |
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| 3UTR-3UTR CCA 90 bp | AAGGCCACCCTAGGAAACCCTAGGCACCCAGCTCATGCCCCCAGAGCCACCTGGAAGCTGCCACACTCTTaGGAGTTGTTGCCAGACTGG | + |
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Preference number: 2 (lower is better) Translates to: KATLGNPRHPAHAPRATWKLPHS*ELLPDW Trigger: CCAGTCTGGCAACAACTCCCAAGAGTGTGGCAGCTT...CCAGGTGGCTCTGGGGGCATGAGCTGGGTGCCTAGGGTTTCCTAGGGTGGCCTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000206234.2 |
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| 3UTR-3UTR GCA 90 bp | GGCCAGACTCTCGGCCAGCATCCAGGTTCATGGCTGGATAGCCATCATCCTCACGACACACAGGCCCTCTaGATCTCCCACAGTCACTGT | + |
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Preference number: 2 (lower is better) Translates to: GQTLGQHPGSWLDSHHPHDTQAL*ISHSHC Trigger: ACAGTGACTGTGGGAGATGCAGAGGGCCTGTGTGTC...GTGAGGATGATGGCTATCCAGCCATGAACCTGGATGCTGGCCGAGAGTCTGGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206103.2 |
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| 3UTR CAA 90 bp | GATTATGCACCAGTGACCAGGCTCAGACATTCCATCACACTCCAGTaGCTCTTCCAGACCCGGCAGCCCCGGGAACTTCTTCTCCTTGGC | + |
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Preference number: 2 (lower is better) Translates to: DYAPVTRLRHSITLQ*LFQTRQPRELLLLG Trigger: GCCAAGGAGAAGAAGTTCCCGGGGCTGCCGGGTCTGGAAGAGCAACTGGAGTGTGATGGAATGTCTGAGCCTGGTCACTGGTGCATAATC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206103.2 |
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| 3UTR-3UTR CCA 90 bp | CGAGGGGGTCCTTCATCAGTCTCCACGGGGCTGCCACAGTCTGAACCTGCAAAGCAGCATCCAGGTTCATaGCTGGATAGCCATCATCCT | + |
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Preference number: 2 (lower is better) Translates to: RGGPSSVSTGLPQSEPAKQHPGS*LDSHHP Trigger: AGGATGATGGCTATCCAGCCATGAACCTGGATGCTG...CTTTGCAGGTTCAGACTGTGGCAGCCCCGTGGAGACTGATGAAGGACCCCCTCG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000206103.2 |
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| 3UTR-3UTR TCA 90 bp | TTCCCAGGTAAGACTTGCTTCCCACCACAGAACAAGGCCACCCTAGGAAACCCTCCTGGGTCTGAAAGATaGCGGGGTCACTCCACTCAC | + |
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Preference number: 2 (lower is better) Translates to: FPGKTCFPPQNKATLGNPPGSER*RGHSTH Trigger: GTGAGTGGAGTGACCCCGTCATCTTTCAGACCCAGG...AGGGTTTCCTAGGGTGGCCTTGTTCTGTGGTGGGAAGCAAGTCTTACCTGGGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206234.2 |
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| 3UTR-3UTR CCA 90 bp | CGAGGGGGTCCTTCATCAGTCTCCACGGGGCTGCCACAGTCTGAACCTGCAAAGATCCAGGTTCATGGCTaGATAGCCATCATCCTCACA | + |
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Preference number: 2 (lower is better) Translates to: RGGPSSVSTGLPQSEPAKIQVHG*IAIILT Trigger: TGTGAGGATGATGGCTATCCAGCCATGAACCTGGAT...CTTTGCAGGTTCAGACTGTGGCAGCCCCGTGGAGACTGATGAAGGACCCCCTCG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000206103.2 |
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| 3UTR-3UTR TCA 90 bp | CCAGAGCCACCTGGTTTGCCCACCTTAACTCTAAGTTGGAAATACATCATGATGCCAGGTCCCCCTGAATaGAGTGCCTGGCTGAGGCGC | + |
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Preference number: 2 (lower is better) Translates to: PEPPGLPTLTLSWKYIMMPGPPE*SAWLRR Trigger: GCGCCTCAGCCAGGCACTTCATTCAGGGGGACCTGG...CATCATGATGTATTTCCAACTTAGAGTTAAGGTGGGCAAACCAGGTGGCTCTGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000206234.2 |
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| 3UTR-3UTR TCA 90 bp | GTTGGGTCTGCTGTCCAGTCCCCTTCCTTTGCAAATGACAGCCTCAACCTGTCCGAAAAGCAGGGTCTGTaGCCAAGAGCAGATCCTCTG | + |
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Preference number: 2 (lower is better) Translates to: VGSAVQSPSFANDSLNLSEKQGL*PRADPL Trigger: CAGAGGATCTGCTCTTGGTCACAGACCCTGCTTTTC...GGACAGGTTGAGGCTGTCATTTGCAAAGGAAGGGGACTGGACAGCAGACCCAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000206103.2 |
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| 3UTR-3UTR GCA 90 bp | GCCACCTCCTCACCAGTGTACCCCAGATACTTGCTGTTTCTCCTGGCCACAGGCTGTTCACACTGTAAATaGCAGGCTCAGAGGCCTCTT | + |
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Preference number: 2 (lower is better) Translates to: ATSSPVYPRYLLFLLATGCSHCK*QAQRPL Trigger: AAGAGGCCTCTGAGCCTGGCATTTACAGTGTGAACA...GCCTGTGGCCAGGAGAAACAGCAAGTATCTGGGGTACACTGGTGAGGAGGTGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033000.8 |
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| 3UTR-3UTR CCA 90 bp | TTCCCAGGTAAGACTTGCTTCCCACCACAGAACAAGGCCACCCTAGGAAACCCTTCCCTGTACAGGGGCTaGAAGAAACTCTCAGGGGTG | + |
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Preference number: 2 (lower is better) Translates to: FPGKTCFPPQNKATLGNPSLYRG*KKLSGV Trigger: CACCCCTGAGAGTTTCTTCCAGCCCCTGTACAGGGA...AGGGTTTCCTAGGGTGGCCTTGTTCTGTGGTGGGAAGCAAGTCTTACCTGGGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000206234.2 |
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| 3UTR-3UTR CCA 90 bp | GGGGTCCTTCATCAGTCTCCACGGGGCTGCCACAGTCTGAACCTGCAAAGCCACGGAACTTCTTCTCCTTaGCTGGATACAATGACAGAT | + |
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Preference number: 2 (lower is better) Translates to: GVLHQSPRGCHSLNLQSHGTSSP*LDTMTD Trigger: ATCTGTCATTGTATCCAGCCAAGGAGAAGAAGTTCC...GTGGCTTTGCAGGTTCAGACTGTGGCAGCCCCGTGGAGACTGATGAAGGACCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000206103.2 |
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| 3UTR-3UTR CCA 90 bp | GTTGGGTCTGCTGTCCAGTCCCCTTCCTTTGCAAATGACAGCCTCAACCTGTCCCAGTCACTGTGTCAATaGACACCAGACCATATGGCC | + |
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Preference number: 2 (lower is better) Translates to: VGSAVQSPSFANDSLNLSQSLCQ*TPDHMA Trigger: GGCCATATGGTCTGGTGTCCATTGACACAGTGACTG...GGACAGGTTGAGGCTGTCATTTGCAAAGGAAGGGGACTGGACAGCAGACCCAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206103.2 |
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| 3UTR CAA 90 bp | TCCAGTTGCTCTTCCAGACCCGGCAGCCCCGGGAACTTCTTCTCCTaGGCTGGATACAATGACAGATGTAAGGCTGATGTTGTTGTGGAA | + |
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Preference number: 2 (lower is better) Translates to: SSCSSRPGSPGNFFS*AGYNDRCKADVVVE Trigger: TTCCACAACAACATCAGCCTTACATCTGTCATTGTATCCAGCCAAGGAGAAGAAGTTCCCGGGGCTGCCGGGTCTGGAAGAGCAACTGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206103.2 |
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| 3UTR-3UTR CCA 90 bp | AGAAAAGCAGGGTCTGTGACCAAGAGCAGATCCTCTGAATTAGGGCCAGACTCTGGACACCAGACCATATaGCCGGTCTCTCTCCTCACT | + |
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Preference number: 2 (lower is better) Translates to: RKAGSVTKSRSSELGPDSGHQTI*PVSLLT Trigger: AGTGAGGAGAGAGACCGGCCATATGGTCTGGTGTCC...AGAGTCTGGCCCTAATTCAGAGGATCTGCTCTTGGTCACAGACCCTGCTTTTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206103.2 |
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| 3UTR CAA 90 bp | CCCTATCCTGACACCACATGCTCTCTTCAGTGCCTTCTGCCAATGTaGGGTTTGCGCATCAGGGCTGGCAGACACTTTGAAATGAATGAC | + |
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Preference number: 2 (lower is better) Translates to: PYPDTTCSLQCLLPM*GLRIRAGRHFEMND Trigger: GTCATTCATTTCAAAGTGTCTGCCAGCCCTGATGCGCAAACCCAACATTGGCAGAAGGCACTGAAGAGAGCATGTGGTGTCAGGATAGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206234.2 |
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| 3UTR-3UTR TCA 90 bp | AGTGGCAGCTGTACTTGGGATGTATTGTGGGGTAGGACAAGTCCTTCCCAGGTAGATATCATAGCGTCCTaGGAAGGCCACAGTCACGTT | + |
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Preference number: 2 (lower is better) Translates to: SGSCTWDVLWGRTSPSQVDIIAS*EGHSHV Trigger: AACGTGACTGTGGCCTTCTCAGGACGCTATGATATC...TACCTGGGAAGGACTTGTCCTACCCCACAATACATCCCAAGTACAGCTGCCACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206234.2 |
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| 3UTR-3UTR TCA 90 bp | TTCAGTGCCTTCTGCCAATGTTGGGTTTGCGCATCAGGGCTGGCAGACACTTTGGGGTTCGTCATAAGCTaGGTCCCAGGAGATATCATA | + |
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Preference number: 2 (lower is better) Translates to: FSAFCQCWVCASGLADTLGFVIS*VPGDII Trigger: TATGATATCTCCTGGGACTCAGCTTATGACGAACCC...CAAAGTGTCTGCCAGCCCTGATGCGCAAACCCAACATTGGCAGAAGGCACTGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206234.2 |
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| 3UTR CAA 90 bp | CCTGACACCACATGCTCTCTTCAGTGCCTTCTGCCAATGTTGGGTTaGCGCATCAGGGCTGGCAGACACTTTGAAATGAATGACAGTAGT | + |
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Preference number: 2 (lower is better) Translates to: PDTTCSLQCLLPMLG*RIRAGRHFEMNDSS Trigger: ACTACTGTCATTCATTTCAAAGTGTCTGCCAGCCCTGATGCGCAAACCCAACATTGGCAGAAGGCACTGAAGAGAGCATGTGGTGTCAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206234.2 |
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| 3UTR-3UTR GCA 90 bp | CAGATACTTGCTGTTTCTCCTGGCCACAGGCTCATGGTCCCTCTCCCCTCACGGCCTCCAGTAATTGGTTaGAGCCAATTTTATTTAACC | + |
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Preference number: 2 (lower is better) Translates to: QILAVSPGHRLMVPLPSRPPVIG*SQFYLT Trigger: GGTTAAATAAAATTGGCTGCAACCAATTACTGGAGG...CCGTGAGGGGAGAGGGACCATGAGCCTGTGGCCAGGAGAAACAGCAAGTATCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033000.8 |
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| 3UTR-3UTR GCA 90 bp | CACTGTAAATGCCAGGCTCAGAGGCCTCTTCTCACTATAGCTGGTTATTATATGCCATCACACTCCAGTTaGTCTTCCAGACCCGGCAGC | + |
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Preference number: 2 (lower is better) Translates to: HCKCQAQRPLLTIAGYYMPSHSS*SSRPGS Trigger: GCTGCCGGGTCTGGAAGAGCAACTGGAGTGTGATGG...CATATAATAACCAGCTATAGTGAGAAGAGGCCTCTGAGCCTGGCATTTACAGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206103.2 |
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| 3UTR-3UTR CCA 90 bp | CCCCTAATCTACTCTTCTAACTGCTGGCCTGGCCACCTCCTCACCAGTGTACCCGTAGGCCTAGAACTTTaGGTAGAGAATTTAGCATTA | + |
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Preference number: 2 (lower is better) Translates to: PLIYSSNCWPGHLLTSVPVGLEL*VENLAL Trigger: TAATGCTAAATTCTCTACCCAAAGTTCTAGGCCTAC...GGGTACACTGGTGAGGAGGTGGCCAGGCCAGCAGTTAGAAGAGTAGATTAGGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033000.8 |
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| 3UTR-3UTR TCA 90 bp | GGAACAAGGTTTACACAGCAAGTTTGTAAACATGAGAATTCACTCGTAGGCCTACCTGAGACCACTACCTaGGACACAGCCGCAAGACAG | + |
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Preference number: 2 (lower is better) Translates to: GTRFTQQVCKHENSLVGLPETTT*DTAARQ Trigger: CTGTCTTGCGGCTGTGTCTCAGGTAGTGGTCTCAGG...TAGGCCTACGAGTGAATTCTCATGTTTACAAACTTGCTGTGTAAACCTTGTTCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206103.2 |
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| 3UTR-3UTR GCA 90 bp | TTGCGCATCAGGGCTGGCAGACACTTTGAAATGAATGACAGTAGTGGCAGCTGTCTGAGGTTCCGATACTaGAGCTCATATTGTAGCTTG | + |
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Preference number: 2 (lower is better) Translates to: LRIRAGRHFEMNDSSGSCLRFRY*SSYCSL Trigger: CAAGCTACAATATGAGCTGCAGTATCGGAACCTCAG...ACAGCTGCCACTACTGTCATTCATTTCAAAGTGTCTGCCAGCCCTGATGCGCAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206234.2 |
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| 3UTR-3UTR CCA 90 bp | GGAACAAGGTTTACACAGCAAGTTTGTAAACATGAGAATTCACTCGTAGGCCTATACTCTTCTAACTGCTaGCCTGGCCACCTCCTCACC | + |
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Preference number: 2 (lower is better) Translates to: GTRFTQQVCKHENSLVGLYSSNC*PGHLLT Trigger: GGTGAGGAGGTGGCCAGGCCAGCAGTTAGAAGAGTA...TAGGCCTACGAGTGAATTCTCATGTTTACAAACTTGCTGTGTAAACCTTGTTCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033000.8 |
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| 3UTR-3UTR CCA 90 bp | AGAAAAGCAGGGTCTGTGACCAAGAGCAGATCCTCTGAATTAGGGCCAGACTCTGTAGGCCTAGAACTTTaGGTAGAGAATTTAGCATTA | + |
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Preference number: 2 (lower is better) Translates to: RKAGSVTKSRSSELGPDSVGLEL*VENLAL Trigger: TAATGCTAAATTCTCTACCCAAAGTTCTAGGCCTAC...AGAGTCTGGCCCTAATTCAGAGGATCTGCTCTTGGTCACAGACCCTGCTTTTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206103.2 |
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| 3UTR-3UTR CCA 90 bp | TTTGACAAATACTGGAGGTCACCCCTAATCTACTCTTCTAACTGCTGGCCTGGCAATCCCTCCAGTAATTaGTTGCAGCCAATTTTATTT | + |
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Preference number: 2 (lower is better) Translates to: FDKYWRSPLIYSSNCWPGNPSSN*LQPILF Trigger: AAATAAAATTGGCTGCAACCAATTACTGGAGGGATT...GCCAGGCCAGCAGTTAGAAGAGTAGATTAGGGGTGACCTCCAGTATTTGTCAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033000.8 |
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| 3UTR TCA 72 bp | TGCTCTGGGCTCCACTGTCCACAGGTGGAGGGGTCCTaGCCACCCACTGGCGGAGATAGCTTCGAGGGGGTC | + |
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Preference number: 3 (lower is better) Translates to: CSGLHCPQVEGS*PPTGGDSFEGV Trigger: GACCCCCTCGAAGCTATCTCCGCCAGTGGGTGGTCAGGACCCCTCCACCTGTGGACAGTGGAGCCCAGAGCA 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000206103.2 |
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| 3UTR-3UTR CAA 90 bp | ACCCACAGCAGGATCGACTGTAGGTCAGGCTGCAGGCCAGGCGCACAGCAGGTGCTGCCAATGTTGGGTTaGCGCATCAGGGCTGGCAGA | + |
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Preference number: 3 (lower is better) Translates to: THSRIDCRSGCRPGAQQVLPMLG*RIRAGR Trigger: TCTGCCAGCCCTGATGCGCAAACCCAACATTGGCAG...CACCTGCTGTGCGCCTGGCCTGCAGCCTGACCTACAGTCGATCCTGCTGTGGGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206234.2 |
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| 3UTR GCA 72 bp | GGCTGCAGGCCAGGCGCACAGCAGGTGTTCCTTGGGTaGTCTACAGTGCTAACCTCCATGGTGTGCTACAGG | + |
|
Preference number: 3 (lower is better) Translates to: GCRPGAQQVFLG*STVLTSMVCYR Trigger: CCTGTAGCACACCATGGAGGTTAGCACTGTAGAGCACCCAAGGAACACCTGCTGTGCGCCTGGCCTGCAGCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206234.2 |
||
| 3UTR-3UTR CAA 90 bp | GGGGGTCCTTCATCAGTCTCCACGGGGCTGCCACAGTCTGAACCTGCAAAGCCATCCATCACACTCCAGTaGCTCTTCCAGACCCGGCAG | + |
|
Preference number: 3 (lower is better) Translates to: GGPSSVSTGLPQSEPAKPSITLQ*LFQTRQ Trigger: CTGCCGGGTCTGGAAGAGCAACTGGAGTGTGATGGA...TGGCTTTGCAGGTTCAGACTGTGGCAGCCCCGTGGAGACTGATGAAGGACCCCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000206103.2 |
||
| 3UTR GCA 72 bp | GCCTGGCCACCTCCTCACCAGTGTACCCCAGATACTTaGTGTTTCTCCTGGCCACAGGCTCATGGTCCCTCT | + |
|
Preference number: 3 (lower is better) Translates to: AWPPPHQCTPDT*CFSWPQAHGPS Trigger: AGAGGGACCATGAGCCTGTGGCCAGGAGAAACAGCAAGTATCTGGGGTACACTGGTGAGGAGGTGGCCAGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033000.8 |
||
| 3UTR CCA 72 bp | CCTCACCAGTGTACCCCAGATACTTGCTGTTTCTCCTaGCCACAGGCTCATGGTCCCTCTCCCCTCACGGCA | + |
|
Preference number: 3 (lower is better) Translates to: PHQCTPDTCCFS*PQAHGPSPLTA Trigger: TGCCGTGAGGGGAGAGGGACCATGAGCCTGTGGCCAGGAGAAACAGCAAGTATCTGGGGTACACTGGTGAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033000.8 |
||
| 3UTR CCA 72 bp | GTCAGGCTGCAGGCCAGGCGCACAGCAGGTGTTCCTTaGGTGCTCTACAGTGCTAACCTCCATGGTGTGCTA | + |
|
Preference number: 3 (lower is better) Translates to: VRLQARRTAGVP*VLYSANLHGVL Trigger: TAGCACACCATGGAGGTTAGCACTGTAGAGCACCCAAGGAACACCTGCTGTGCGCCTGGCCTGCAGCCTGAC 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206234.2 |
||
| 3UTR CCA 72 bp | TATATGCTAGCTGCTCTGGGCTCCACTGTCCACAGGTaGAGGGGTCCTGACCACCCACTGGCGGAGATAGCT | + |
|
Preference number: 3 (lower is better) Translates to: YMLAALGSTVHR*RGPDHPLAEIA Trigger: AGCTATCTCCGCCAGTGGGTGGTCAGGACCCCTCCACCTGTGGACAGTGGAGCCCAGAGCAGCTAGCATATA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206103.2 |
||
| 3UTR TCA 72 bp | CAGCAGCAACAGCACACAGCAGGCAGCAGTGCTGAGTaGACTTCAGGGGTAAGGAAGGGATGTGTGGCCTGC | + |
|
Preference number: 3 (lower is better) Translates to: QQQQHTAGSSAE*TSGVRKGCVAC Trigger: GCAGGCCACACATCCCTTCCTTACCCCTGAAGTTCACTCAGCACTGCTGCCTGCTGTGTGCTGTTGCTGCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206234.2 |
||
| 3UTR TCA 72 bp | CAGACCATATGGCCGGTCTCTCTCCTCACTGTAGGCTaGGACCGCTTGGCCAGCTGCCAAGGGGATTATGCA | + |
|
Preference number: 3 (lower is better) Translates to: QTIWPVSLLTVG*DRLASCQGDYA Trigger: TGCATAATCCCCTTGGCAGCTGGCCAAGCGGTCTCAGCCTACAGTGAGGAGAGAGACCGGCCATATGGTCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206103.2 |
||
| 3UTR GCA 72 bp | AGCTTCGAGGGGGTCCTTCATCAGTCTCCACGGGGCTaGCACAGTCTGAACCTGCAAAGCCACTGTCAAATG | + |
|
Preference number: 3 (lower is better) Translates to: SFEGVLHQSPRG*HSLNLQSHCQM Trigger: CATTTGACAGTGGCTTTGCAGGTTCAGACTGTGGCAGCCCCGTGGAGACTGATGAAGGACCCCCTCGAAGCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000206103.2 |
||
| 3UTR GCA 72 bp | CCTATCCTGACACCACATGCTCTCTTCAGTGCCTTCTaGCAATGTTGGGTTTGCGCATCAGGGCTGGCAGAC | + |
|
Preference number: 3 (lower is better) Translates to: PILTPHALFSAF*QCWVCASGLAD Trigger: GTCTGCCAGCCCTGATGCGCAAACCCAACATTGGCAGAAGGCACTGAAGAGAGCATGTGGTGTCAGGATAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206234.2 |
||
| 3UTR-3UTR CAA 90 bp | CATGCTCTCTTCAGTGCCTTCTGCCAATGTTGGGTTTGCGCATCAGGGCTGGCACCAGAGCCACCTGGTTaGCCCACCTTAACTCTAAGT | + |
|
Preference number: 3 (lower is better) Translates to: HALFSAFCQCWVCASGLAPEPPG*PTLTLS Trigger: ACTTAGAGTTAAGGTGGGCAAACCAGGTGGCTCTGG...TGCCAGCCCTGATGCGCAAACCCAACATTGGCAGAAGGCACTGAAGAGAGCATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206234.2 |
||
| 3UTR TCA 72 bp | TCAGCTTGGTCACCGGCCTCACAGCATAGGGGTCTCTaGGGTTCCGATACTGCAGCTCATATTGTAGCTTGC | + |
|
Preference number: 3 (lower is better) Translates to: SAWSPASQHRGL*GSDTAAHIVAC Trigger: GCAAGCTACAATATGAGCTGCAGTATCGGAACCTCAGAGACCCCTATGCTGTGAGGCCGGTGACCAAGCTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206234.2 |
||
| 3UTR GCA 72 bp | AAATACTGGAGGTCACCCCTAATCTACTCTTCTAACTaGTGGCCTGGCCACCTCCTCACCAGTGTACCCCAG | + |
|
Preference number: 3 (lower is better) Translates to: KYWRSPLIYSSN*WPGHLLTSVPQ Trigger: CTGGGGTACACTGGTGAGGAGGTGGCCAGGCCAGCAGTTAGAAGAGTAGATTAGGGGTGACCTCCAGTATTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033000.8 |
||
| 3UTR GCA 72 bp | CAGGTTCCCTATCCTGACACCACATGCTCTCTTCAGTaGCTTCTGCCAATGTTGGGTTTGCGCATCAGGGCT | + |
|
Preference number: 3 (lower is better) Translates to: QVPYPDTTCSLQ*LLPMLGLRIRA Trigger: AGCCCTGATGCGCAAACCCAACATTGGCAGAAGGCACTGAAGAGAGCATGTGGTGTCAGGATAGGGAACCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206234.2 |
||
| 3UTR CCA 72 bp | TACTGGAGGTCACCCCTAATCTACTCTTCTAACTGCTaGCCTGGCCACCTCCTCACCAGTGTACCCCAGATA | + |
|
Preference number: 3 (lower is better) Translates to: YWRSPLIYSSNC*PGHLLTSVPQI Trigger: TATCTGGGGTACACTGGTGAGGAGGTGGCCAGGCCAGCAGTTAGAAGAGTAGATTAGGGGTGACCTCCAGTA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033000.8 |
||
| 3UTR CCA 72 bp | CTTCCAGACCCGGCAGCCCCGGGAACTTCTTCTCCTTaGCTGGATACAATGACAGATGTAAGGCTGATGTTG | + |
|
Preference number: 3 (lower is better) Translates to: LPDPAAPGTSSP*LDTMTDVRLML Trigger: CAACATCAGCCTTACATCTGTCATTGTATCCAGCCAAGGAGAAGAAGTTCCCGGGGCTGCCGGGTCTGGAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206103.2 |
||
| 3UTR CCA 72 bp | AACCCTAGGCACCCAGCTCATGCCCCCAGAGCCACCTaGTTTGCCCACCTTAACTCTAAGTTGGAAATACAT | + |
|
Preference number: 3 (lower is better) Translates to: NPRHPAHAPRAT*FAHLNSKLEIH Trigger: ATGTATTTCCAACTTAGAGTTAAGGTGGGCAAACCAGGTGGCTCTGGGGGCATGAGCTGGGTGCCTAGGGTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000206234.2 |
||
| 3UTR-3UTR CAA 90 bp | CTTCAGGGAGAAGAGAGACGTTTCTTGAGTCCACTGAGATCAGCTTGGTCACCGAAAGCTGCCACACTCTaGGGAGTTGTTGCCAGACTG | + |
|
Preference number: 3 (lower is better) Translates to: LQGEERRFLSPLRSAWSPKAATL*GVVARL Trigger: CAGTCTGGCAACAACTCCCAAGAGTGTGGCAGCTTT...CGGTGACCAAGCTGATCTCAGTGGACTCAAGAAACGTCTCTCTTCTCCCTGAAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206234.2 |
||
| 3UTR-3UTR CAA 90 bp | CTTCTAACTGCTGGCCTGGCCACCTCCTCACCAGTGTACCCCAGATACTTGCTGCGTAGGCCTAGAACTTaGGGTAGAGAATTTAGCATT | + |
|
Preference number: 3 (lower is better) Translates to: LLTAGLATSSPVYPRYLLRRPRT*GREFSI Trigger: AATGCTAAATTCTCTACCCAAAGTTCTAGGCCTACG...CAGCAAGTATCTGGGGTACACTGGTGAGGAGGTGGCCAGGCCAGCAGTTAGAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033000.8 |
||
| 3UTR-3UTR CAA 90 bp | TGCACCAGTGACCAGGCTCAGACATTCCATCACACTCCAGTTGCTCTTCCAGACGGGAACTTCTTCTCCTaGGCTGGATACAATGACAGA | + |
|
Preference number: 3 (lower is better) Translates to: CTSDQAQTFHHTPVALPDGNFFS*AGYNDR Trigger: TCTGTCATTGTATCCAGCCAAGGAGAAGAAGTTCCC...GTCTGGAAGAGCAACTGGAGTGTGATGGAATGTCTGAGCCTGGTCACTGGTGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206103.2 |
||
| 3UTR GCA 72 bp | CATGGTGTGCTACAGGTTCCCTATCCTGACACCACATaGTCTCTTCAGTGCCTTCTGCCAATGTTGGGTTTG | + |
|
Preference number: 3 (lower is better) Translates to: HGVLQVPYPDTT*SLQCLLPMLGL Trigger: CAAACCCAACATTGGCAGAAGGCACTGAAGAGAGCATGTGGTGTCAGGATAGGGAACCTGTAGCACACCATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206234.2 |
||
| 3UTR CCA 72 bp | GCAGCTCATATTGTAGCTTGCCCCTCAGCACGTAGTTaGAGGGTTCGTCATAAGCTGAGTCCCAGGAGATAT | + |
|
Preference number: 3 (lower is better) Translates to: AAHIVACPSARS*RVRHKLSPRRY Trigger: ATATCTCCTGGGACTCAGCTTATGACGAACCCTCCAACTACGTGCTGAGGGGCAAGCTACAATATGAGCTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206234.2 |
||
| 3UTR CCA 72 bp | ACACCACATGCTCTCTTCAGTGCCTTCTGCCAATGTTaGGTTTGCGCATCAGGGCTGGCAGACACTTTGAAA | + |
|
Preference number: 3 (lower is better) Translates to: TPHALFSAFCQC*VCASGLADTLK Trigger: TTTCAAAGTGTCTGCCAGCCCTGATGCGCAAACCCAACATTGGCAGAAGGCACTGAAGAGAGCATGTGGTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206234.2 |
||
| 3UTR-3UTR CAA 90 bp | TTTGACAAATACTGGAGGTCACCCCTAATCTACTCTTCTAACTGCTGGCCTGGCGTGTACCCCAGATACTaGCTGTTTCTCCTGGCCACA | + |
|
Preference number: 3 (lower is better) Translates to: FDKYWRSPLIYSSNCWPGVYPRY*LFLLAT Trigger: TGTGGCCAGGAGAAACAGCAAGTATCTGGGGTACAC...GCCAGGCCAGCAGTTAGAAGAGTAGATTAGGGGTGACCTCCAGTATTTGTCAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033000.8 |
||
| 3UTR-3UTR CAA 90 bp | TCCCAAAGGGCAAACGACCCAGAGGGTGTATCCAAAGTAGCTCACCTTGAAGTTGAAGAGAGACGTTTCTaGAGTCCACTGAGATCAGCT | + |
|
Preference number: 3 (lower is better) Translates to: SQRANDPEGVSKVAHLEVEERRF*SPLRSA Trigger: AGCTGATCTCAGTGGACTCAAGAAACGTCTCTCTTC...AACTTCAAGGTGAGCTACTTTGGATACACCCTCTGGGTCGTTTGCCCTTTGGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206234.2 |
||
| 3UTR TCA 72 bp | TGGGTTTGCGCATCAGGGCTGGCAGACACTTTGAAATaGATGACAGTAGTGGCAGCTGTACTTGGGATGTAT | + |
|
Preference number: 3 (lower is better) Translates to: WVCASGLADTLK*MTVVAAVLGMY Trigger: ATACATCCCAAGTACAGCTGCCACTACTGTCATTCATTTCAAAGTGTCTGCCAGCCCTGATGCGCAAACCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206234.2 |
||
| 3UTR CCA 72 bp | CACTTTGAAATGAATGACAGTAGTGGCAGCTGTACTTaGGATGTATTGTGGGGTAGGACAAGTCCTTCCCAG | + |
|
Preference number: 3 (lower is better) Translates to: HFEMNDSSGSCT*DVLWGRTSPSQ Trigger: CTGGGAAGGACTTGTCCTACCCCACAATACATCCCAAGTACAGCTGCCACTACTGTCATTCATTTCAAAGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206234.2 |
||
| CDS-3UTR GCA 90 bp | GGCCACCTCCTCACCAGTGTACCCCAGATACTTGCTGTTTCTCCTGGCCACAGGGTGAGGGTCCCAGCCTaGCTCGGGCTCCCCAGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: GHLLTSVPQILAVSPGHRVRVPA*LGLPSL Trigger: CAGGCTGGGGAGCCCGAGGCAGGCTGGGACCCTCAC...CCTGTGGCCAGGAGAAACAGCAAGTATCTGGGGTACACTGGTGAGGAGGTGGCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033000.8 |
||
| CDS-3UTR TCA 90 bp | GCCACAGGCTCATGGTCCCTCTCCCCTCACGGCAGCCTCTCCTCTCCTCTCCTCCCTGGGTCTGAAAGATaGCGGGGTCACTCCACTCAC | + |
|
Preference number: 4 (lower is better) Translates to: ATGSWSLSPHGSLSSPLLPGSER*RGHSTH Trigger: GTGAGTGGAGTGACCCCGTCATCTTTCAGACCCAGG...GAGGAGAGGAGAGGAGAGGCTGCCGTGAGGGGAGAGGGACCATGAGCCTGTGGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033000.8 |
||
| CDS-3UTR GCA 90 bp | CAGAGCCCCCTCCTGGGGACCCAGTTCTCCAGGTTGGGTCTGCTGTCCAGTCCCTTGAAGTTCCCGCTGTaGTCCCTGTACAGGGGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: QSPLLGTQFSRLGLLSSPLKFPL*SLYRGW Trigger: CCAGCCCCTGTACAGGGAGCACAGCGGGAACTTCAA...GGGACTGGACAGCAGACCCAACCTGGAGAACTGGGTCCCCAGGAGGGGGCTCTG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000206103.2 |
||
| CDS-3UTR GCA 90 bp | CCCCTAATCTACTCTTCTAACTGCTGGCCTGGCCACCTCCTCACCAGTGTACCCGCCTGGCTGAGGCGCTaGCCGCACCTGCAGCTGGTA | + |
|
Preference number: 4 (lower is better) Translates to: PLIYSSNCWPGHLLTSVPAWLRR*PHLQLV Trigger: TACCAGCTGCAGGTGCGGGCAGCGCCTCAGCCAGGC...GGGTACACTGGTGAGGAGGTGGCCAGGCCAGCAGTTAGAAGAGTAGATTAGGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033000.8 |
||
| CDS-3UTR TCA 90 bp | CCCCTAATCTACTCTTCTAACTGCTGGCCTGGCCACCTCCTCACCAGTGTACCCCCAGGTCCCCCTGAATaGAGTGCCTGGCTGAGGCGC | + |
|
Preference number: 4 (lower is better) Translates to: PLIYSSNCWPGHLLTSVPPGPPE*SAWLRR Trigger: GCGCCTCAGCCAGGCACTTCATTCAGGGGGACCTGG...GGGTACACTGGTGAGGAGGTGGCCAGGCCAGCAGTTAGAAGAGTAGATTAGGGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000033000.8 |
||
| 3UTR CAA 72 bp | GGCCTGGCCACCTCCTCACCAGTGTACCCCAGATACTaGCTGTTTCTCCTGGCCACAGGCTCATGGTCCCTC | + |
|
Preference number: 4 (lower is better) Translates to: GLATSSPVYPRY*LFLLATGSWSL Trigger: GAGGGACCATGAGCCTGTGGCCAGGAGAAACAGCAAGTATCTGGGGTACACTGGTGAGGAGGTGGCCAGGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033000.8 |
||
| CDS-3UTR TCA 90 bp | TCACTCTCAGAGCCCCCTCCTGGGGACCCAGTTCTCCAGGTTGGGTCTGCTGTCTCTCCAGGACACAGGTaGTGGTCCAGAGGTAGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: SLSEPPPGDPVLQVGSAVSPGHR*WSRGSQ Trigger: CTGACTACCTCTGGACCATCACCTGTGTCCTGGAGA...GACAGCAGACCCAACCTGGAGAACTGGGTCCCCAGGAGGGGGCTCTGAGAGTGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000206103.2 |
||
| CDS-3UTR GCA 90 bp | TGCACCAGTGACCAGGCTCAGACATTCCATCACACTCCAGTTGCTCTTCCAGACGCCTGGCTGAGGCGCTaGCCGCACCTGCAGCTGGTA | + |
|
Preference number: 4 (lower is better) Translates to: CTSDQAQTFHHTPVALPDAWLRR*PHLQLV Trigger: TACCAGCTGCAGGTGCGGGCAGCGCCTCAGCCAGGC...GTCTGGAAGAGCAACTGGAGTGTGATGGAATGTCTGAGCCTGGTCACTGGTGCA 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206103.2 |
||
| CDS-3UTR TCA 90 bp | CAGCTGCCAAGGGGATTATGCACCAGTGACCAGGCTCAGACATTCCATCACACTCCAGGTCCCCCTGAATaGAGTGCCTGGCTGAGGCGC | + |
|
Preference number: 4 (lower is better) Translates to: QLPRGLCTSDQAQTFHHTPGPPE*SAWLRR Trigger: GCGCCTCAGCCAGGCACTTCATTCAGGGGGACCTGG...AGTGTGATGGAATGTCTGAGCCTGGTCACTGGTGCATAATCCCCTTGGCAGCTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000206103.2 |
||
| CDS-3UTR CCA 90 bp | GCCACAGGCTCATGGTCCCTCTCCCCTCACGGCAGCCTCTCCTCTCCTCTCCTCATCCAGGTTCATGGCTaGATAGCCATCATCCTCACA | + |
|
Preference number: 4 (lower is better) Translates to: ATGSWSLSPHGSLSSPLLIQVHG*IAIILT Trigger: TGTGAGGATGATGGCTATCCAGCCATGAACCTGGAT...GAGGAGAGGAGAGGAGAGGCTGCCGTGAGGGGAGAGGGACCATGAGCCTGTGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033000.8 |
||
| CDS-3UTR TCA 90 bp | AAATACTGGAGGTCACCCCTAATCTACTCTTCTAACTGCTGGCCTGGCCACCTCCAGGTGGAGGGGTCCTaGCCACCCACTGGCGGAGAT | + |
|
Preference number: 4 (lower is better) Translates to: KYWRSPLIYSSNCWPGHLQVEGS*PPTGGD Trigger: ATCTCCGCCAGTGGGTGGTCAGGACCCCTCCACCTG...GAGGTGGCCAGGCCAGCAGTTAGAAGAGTAGATTAGGGGTGACCTCCAGTATTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033000.8 |
||
| 3UTR CAA 72 bp | CCAGTGACCAGGCTCAGACATTCCATCACACTCCAGTaGCTCTTCCAGACCCGGCAGCCCCGGGAACTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: PVTRLRHSITLQ*LFQTRQPRELL Trigger: AAGAAGTTCCCGGGGCTGCCGGGTCTGGAAGAGCAACTGGAGTGTGATGGAATGTCTGAGCCTGGTCACTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206103.2 |
||
| CDS-3UTR TCA 90 bp | CCCGGCAGCCCCGGGAACTTCTTCTCCTTGGCTGGATACAATGACAGATGTAAGCCTGGGTCTGAAAGATaGCGGGGTCACTCCACTCAC | + |
|
Preference number: 4 (lower is better) Translates to: PGSPGNFFSLAGYNDRCKPGSER*RGHSTH Trigger: GTGAGTGGAGTGACCCCGTCATCTTTCAGACCCAGG...CTTACATCTGTCATTGTATCCAGCCAAGGAGAAGAAGTTCCCGGGGCTGCCGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000206103.2 |
||
| CDS-3UTR TCA 90 bp | TCTAACTGCTGGCCTGGCCACCTCCTCACCAGTGTACCCCAGATACTTGCTGTTCCTGAGACCACTACCTaGGACACAGCCGCAAGACAG | + |
|
Preference number: 4 (lower is better) Translates to: SNCWPGHLLTSVPQILAVPETTT*DTAARQ Trigger: CTGTCTTGCGGCTGTGTCTCAGGTAGTGGTCTCAGG...AACAGCAAGTATCTGGGGTACACTGGTGAGGAGGTGGCCAGGCCAGCAGTTAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033000.8 |
||
| CDS-3UTR CCA 90 bp | GGGGGTCCTTCATCAGTCTCCACGGGGCTGCCACAGTCTGAACCTGCAAAGCCACAGCTCCAAGCTCCATaGAGAATCAGCAGGAGTAAG | + |
|
Preference number: 4 (lower is better) Translates to: GGPSSVSTGLPQSEPAKPQLQAP*RISRSK Trigger: CTTACTCCTGCTGATTCTCCATGGAGCTTGGAGCTG...TGGCTTTGCAGGTTCAGACTGTGGCAGCCCCGTGGAGACTGATGAAGGACCCCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000206103.2 |
||
| CDS-3UTR TCA 90 bp | TGGAGGTCACCCCTAATCTACTCTTCTAACTGCTGGCCTGGCCACCTCCTCACCCCCTTCCTTTGCAAATaGCAGCCTCAACCTGTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: WRSPLIYSSNCWPGHLLTPFLCK*QPQPVQ Trigger: CTGGACAGGTTGAGGCTGTCATTTGCAAAGGAAGGG...GGTGAGGAGGTGGCCAGGCCAGCAGTTAGAAGAGTAGATTAGGGGTGACCTCCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033000.8 |
||
| CDS-3UTR CCA 90 bp | TGGCTGAGGCGCTGCCCGCACCTGCAGCTGGTAGCTAGAATCTTTGTGGAACTCATATGTGTGGTGTTGTaGCCAGACCTGTGTAGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: WLRRCPHLQLVARIFVELICVVL*PDLCRL Trigger: CAGCCTACACAGGTCTGGCCACAACACCACACATAT...GAGTTCCACAAAGATTCTAGCTACCAGCTGCAGGTGCGGGCAGCGCCTCAGCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206234.2 |
||
| CDS-3UTR CCA 90 bp | CTTCATCAGTCTCCACGGGGCTGCCACAGTCTGAACCTGCAAAGCCACTGTCAATCCCTGTACAGGGGCTaGAAGAAACTCTCAGGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: LHQSPRGCHSLNLQSHCQSLYRG*KKLSGV Trigger: CACCCCTGAGAGTTTCTTCCAGCCCCTGTACAGGGA...TTGACAGTGGCTTTGCAGGTTCAGACTGTGGCAGCCCCGTGGAGACTGATGAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000206103.2 |
||
| CDS-3UTR TCA 90 bp | TCACCCCTAATCTACTCTTCTAACTGCTGGCCTGGCCACCTCCTCACCAGTGTATCTCCAGGACACAGGTaGTGGTCCAGAGGTAGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: SPLIYSSNCWPGHLLTSVSPGHR*WSRGSQ Trigger: CTGACTACCTCTGGACCATCACCTGTGTCCTGGAGA...TACACTGGTGAGGAGGTGGCCAGGCCAGCAGTTAGAAGAGTAGATTAGGGGTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033000.8 |
||
| CDS-3UTR TCA 90 bp | ACCTCCTCACCAGTGTACCCCAGATACTTGCTGTTTCTCCTGGCCACAGGCTCAGAAAAGCAGGGTCTGTaGCCAAGAGCAGATCCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: TSSPVYPRYLLFLLATGSEKQGL*PRADPL Trigger: CAGAGGATCTGCTCTTGGTCACAGACCCTGCTTTTC...TGAGCCTGTGGCCAGGAGAAACAGCAAGTATCTGGGGTACACTGGTGAGGAGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033000.8 |
||
| 3UTR CAA 72 bp | ACTCTAGAGACTAGATCTCCTCCTAGAGACCCAGGGTaGCTGGGAACCCACAGCAGGATCGACTGTAGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: TLETRSPPRDPG*LGTHSRIDCRS Trigger: TGACCTACAGTCGATCCTGCTGTGGGTTCCCAGCAACCCTGGGTCTCTAGGAGGAGATCTAGTCTCTAGAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206234.2 |
||
| CDS-3UTR CCA 90 bp | TCTAACTGCTGGCCTGGCCACCTCCTCACCAGTGTACCCCAGATACTTGCTGTTATATGTGTGGTGTTGTaGCCAGACCTGTGTAGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: SNCWPGHLLTSVPQILAVICVVL*PDLCRL Trigger: CAGCCTACACAGGTCTGGCCACAACACCACACATAT...AACAGCAAGTATCTGGGGTACACTGGTGAGGAGGTGGCCAGGCCAGCAGTTAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033000.8 |
||
| 3UTR CAA 72 bp | GACACCACATGCTCTCTTCAGTGCCTTCTGCCAATGTaGGGTTTGCGCATCAGGGCTGGCAGACACTTTGAA | + |
|
Preference number: 4 (lower is better) Translates to: DTTCSLQCLLPM*GLRIRAGRHFE Trigger: TTCAAAGTGTCTGCCAGCCCTGATGCGCAAACCCAACATTGGCAGAAGGCACTGAAGAGAGCATGTGGTGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206234.2 |
||
| 3UTR CAA 72 bp | TCTTCCAGACCCGGCAGCCCCGGGAACTTCTTCTCCTaGGCTGGATACAATGACAGATGTAAGGCTGATGTT | + |
|
Preference number: 4 (lower is better) Translates to: SSRPGSPGNFFS*AGYNDRCKADV Trigger: AACATCAGCCTTACATCTGTCATTGTATCCAGCCAAGGAGAAGAAGTTCCCGGGGCTGCCGGGTCTGGAAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206103.2 |
||
| CDS-3UTR GCA 90 bp | CCCCTAATCTACTCTTCTAACTGCTGGCCTGGCCACCTCCTCACCAGTGTACCCCTGAGGTTCCGATACTaGAGCTCATATTGTAGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: PLIYSSNCWPGHLLTSVPLRFRY*SSYCSL Trigger: CAAGCTACAATATGAGCTGCAGTATCGGAACCTCAG...GGGTACACTGGTGAGGAGGTGGCCAGGCCAGCAGTTAGAAGAGTAGATTAGGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033000.8 |
||
| CDS-3UTR GCA 90 bp | TTTGACAAATACTGGAGGTCACCCCTAATCTACTCTTCTAACTGCTGGCCTGGCTTGAAGTTCCCGCTGTaGTCCCTGTACAGGGGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: FDKYWRSPLIYSSNCWPGLKFPL*SLYRGW Trigger: CCAGCCCCTGTACAGGGAGCACAGCGGGAACTTCAA...GCCAGGCCAGCAGTTAGAAGAGTAGATTAGGGGTGACCTCCAGTATTTGTCAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033000.8 |
||
| CDS-3UTR CCA 90 bp | AAATACTGGAGGTCACCCCTAATCTACTCTTCTAACTGCTGGCCTGGCCACCTCAAGCTGCCACACTCTTaGGAGTTGTTGCCAGACTGG | + |
|
Preference number: 4 (lower is better) Translates to: KYWRSPLIYSSNCWPGHLKLPHS*ELLPDW Trigger: CCAGTCTGGCAACAACTCCCAAGAGTGTGGCAGCTT...GAGGTGGCCAGGCCAGCAGTTAGAAGAGTAGATTAGGGGTGACCTCCAGTATTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033000.8 |
||
| CDS-3UTR CCA 90 bp | CCAAGGGGATTATGCACCAGTGACCAGGCTCAGACATTCCATCACACTCCAGTTAAGCTGCCACACTCTTaGGAGTTGTTGCCAGACTGG | + |
|
Preference number: 4 (lower is better) Translates to: PRGLCTSDQAQTFHHTPVKLPHS*ELLPDW Trigger: CCAGTCTGGCAACAACTCCCAAGAGTGTGGCAGCTT...AACTGGAGTGTGATGGAATGTCTGAGCCTGGTCACTGGTGCATAATCCCCTTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206103.2 |
||
| CDS-3UTR CCA 90 bp | TCTCCTCTCTCCTTCTCCATCTCCAAACAGGTAACTCAAAAGCCCCCTACCTCTTCCCTGTACAGGGGCTaGAAGAAACTCTCAGGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: SPLSFSISKQVTQKPPTSSLYRG*KKLSGV Trigger: CACCCCTGAGAGTTTCTTCCAGCCCCTGTACAGGGA...AGAGGTAGGGGGCTTTTGAGTTACCTGTTTGGAGATGGAGAAGGAGAGAGGAGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000033000.8 |
||
| CDS-3UTR CCA 90 bp | GCCACCTCCTCACCAGTGTACCCCAGATACTTGCTGTTTCTCCTGGCCACAGGCGGAACTTCTTCTCCTTaGCTGGATACAATGACAGAT | + |
|
Preference number: 4 (lower is better) Translates to: ATSSPVYPRYLLFLLATGGTSSP*LDTMTD Trigger: ATCTGTCATTGTATCCAGCCAAGGAGAAGAAGTTCC...GCCTGTGGCCAGGAGAAACAGCAAGTATCTGGGGTACACTGGTGAGGAGGTGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033000.8 |
||
| CDS-3UTR CCA 90 bp | TCTCCTCTCTCCTTCTCCATCTCCAAACAGGTAACTCAAAAGCCCCCTACCTCTGGACACCAGACCATATaGCCGGTCTCTCTCCTCACT | + |
|
Preference number: 4 (lower is better) Translates to: SPLSFSISKQVTQKPPTSGHQTI*PVSLLT Trigger: AGTGAGGAGAGAGACCGGCCATATGGTCTGGTGTCC...AGAGGTAGGGGGCTTTTGAGTTACCTGTTTGGAGATGGAGAAGGAGAGAGGAGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033000.8 |
||
| CDS-3UTR CCA 90 bp | CACTGTAAATGCCAGGCTCAGAGGCCTCTTCTCACTATAGCTGGTTATTATATGCTCAGAGCCCCCTCCTaGGGACCCAGTTCTCCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: HCKCQAQRPLLTIAGYYMLRAPS*GPSSPG Trigger: ACCTGGAGAACTGGGTCCCCAGGAGGGGGCTCTGAG...CATATAATAACCAGCTATAGTGAGAAGAGGCCTCTGAGCCTGGCATTTACAGTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033000.8 |
||
| CDS-3UTR TCA 90 bp | CACTGTAAATGCCAGGCTCAGAGGCCTCTTCTCACTATAGCTGGTTATTATATGGGGAGCCTCCAAGCCTaGGACCACTACCTGAGACAC | + |
|
Preference number: 4 (lower is better) Translates to: HCKCQAQRPLLTIAGYYMGSLQA*DHYLRH Trigger: GTGTCTCAGGTAGTGGTCTCAGGCTTGGAGGCTCCC...CATATAATAACCAGCTATAGTGAGAAGAGGCCTCTGAGCCTGGCATTTACAGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033000.8 |
||
| CDS-3UTR CCA 90 bp | CCAAGGGGATTATGCACCAGTGACCAGGCTCAGACATTCCATCACACTCCAGTTATATGTGTGGTGTTGTaGCCAGACCTGTGTAGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: PRGLCTSDQAQTFHHTPVICVVL*PDLCRL Trigger: CAGCCTACACAGGTCTGGCCACAACACCACACATAT...AACTGGAGTGTGATGGAATGTCTGAGCCTGGTCACTGGTGCATAATCCCCTTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206103.2 |
||
| 3UTR CAA 72 bp | CTTTGTGGAACTCTTCAGGGAGAAGAGAGACGTTTCTaGAGTCCACTGAGATCAGCTTGGTCACCGGCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: LCGTLQGEERRF*SPLRSAWSPAS Trigger: TGAGGCCGGTGACCAAGCTGATCTCAGTGGACTCAAGAAACGTCTCTCTTCTCCCTGAAGAGTTCCACAAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206234.2 |
||
| CDS-3UTR TCA 90 bp | CATGCTCTCTTCAGTGCCTTCTGCCAATGTTGGGTTTGCGCATCAGGGCTGGCAAAGGTCTCTTGGTCCTaGAGTTCCTCATATTCATCT | + |
|
Preference number: 4 (lower is better) Translates to: HALFSAFCQCWVCASGLAKVSWS*SSSYSS Trigger: AGATGAATATGAGGAACTTCAGGACCAAGAGACCTT...TGCCAGCCCTGATGCGCAAACCCAACATTGGCAGAAGGCACTGAAGAGAGCATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206234.2 |
||
| CDS-3UTR TCA 90 bp | AGAAAAGCAGGGTCTGTGACCAAGAGCAGATCCTCTGAATTAGGGCCAGACTCTGATATCATAGCGTCCTaGGAAGGCCACAGTCACGTT | + |
|
Preference number: 4 (lower is better) Translates to: RKAGSVTKSRSSELGPDSDIIAS*EGHSHV Trigger: AACGTGACTGTGGCCTTCTCAGGACGCTATGATATC...AGAGTCTGGCCCTAATTCAGAGGATCTGCTCTTGGTCACAGACCCTGCTTTTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206103.2 |
||
| CDS-3UTR GCA 90 bp | CTGCCAAGGGGATTATGCACCAGTGACCAGGCTCAGACATTCCATCACACTCCACTGAGGTTCCGATACTaGAGCTCATATTGTAGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: LPRGLCTSDQAQTFHHTPLRFRY*SSYCSL Trigger: CAAGCTACAATATGAGCTGCAGTATCGGAACCTCAG...TGGAGTGTGATGGAATGTCTGAGCCTGGTCACTGGTGCATAATCCCCTTGGCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206103.2 |
||
| CDS-3UTR GCA 90 bp | CCCCTACCTCTAATCCCTCCAGTAATTGGTTGCAGCCAATTTTATTTAACCAATACCTGTCCAGTAGGCTaGCTGGGGAGCCTCCAAGCC | + |
|
Preference number: 4 (lower is better) Translates to: PLPLIPPVIGCSQFYLTNTCPVG*LGSLQA Trigger: GGCTTGGAGGCTCCCCAGGCAGCCTACTGGACAGGT...ATTGGTTAAATAAAATTGGCTGCAACCAATTACTGGAGGGATTAGAGGTAGGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000033000.8 |
||
| CDS-3UTR CCA 90 bp | TCTCCTCTCTCCTTCTCCATCTCCAAACAGGTAACTCAAAAGCCCCCTACCTCTCAGTCACTGTGTCAATaGACACCAGACCATATGGCC | + |
|
Preference number: 4 (lower is better) Translates to: SPLSFSISKQVTQKPPTSQSLCQ*TPDHMA Trigger: GGCCATATGGTCTGGTGTCCATTGACACAGTGACTG...AGAGGTAGGGGGCTTTTGAGTTACCTGTTTGGAGATGGAGAAGGAGAGAGGAGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033000.8 |
||
| CDS-3UTR CCA 90 bp | AGAGAGACGTTTCTTGAGTCCACTGAGATCAGCTTGGTCACCGGCCTCACAGCATTCATCTTGCCTCCATaGAGAATCAGCAGGAGTAAG | + |
|
Preference number: 4 (lower is better) Translates to: RETFLESTEISLVTGLTAFILPP*RISRSK Trigger: CTTACTCCTGCTGATTCTCCATGGAGGCAAGATGAA...TGCTGTGAGGCCGGTGACCAAGCTGATCTCAGTGGACTCAAGAAACGTCTCTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206234.2 |
||
| CDS-3UTR TCA 90 bp | AGAAAAGCAGGGTCTGTGACCAAGAGCAGATCCTCTGAATTAGGGCCAGACTCTGGGTTCGTCATAAGCTaGGTCCCAGGAGATATCATA | + |
|
Preference number: 4 (lower is better) Translates to: RKAGSVTKSRSSELGPDSGFVIS*VPGDII Trigger: TATGATATCTCCTGGGACTCAGCTTATGACGAACCC...AGAGTCTGGCCCTAATTCAGAGGATCTGCTCTTGGTCACAGACCCTGCTTTTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206103.2 |
||
| 3UTR CAA 72 bp | ACATGCTCTCTTCAGTGCCTTCTGCCAATGTTGGGTTaGCGCATCAGGGCTGGCAGACACTTTGAAATGAAT | + |
|
Preference number: 4 (lower is better) Translates to: TCSLQCLLPMLG*RIRAGRHFEMN Trigger: ATTCATTTCAAAGTGTCTGCCAGCCCTGATGCGCAAACCCAACATTGGCAGAAGGCACTGAAGAGAGCATGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206234.2 |
||
| CDS-3UTR GCA 90 bp | GGAACAAGGTTTACACAGCAAGTTTGTAAACATGAGAATTCACTCGTAGGCCTACCATCACACTCCAGTTaGTCTTCCAGACCCGGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: GTRFTQQVCKHENSLVGLPSHSS*SSRPGS Trigger: GCTGCCGGGTCTGGAAGAGCAACTGGAGTGTGATGG...TAGGCCTACGAGTGAATTCTCATGTTTACAAACTTGCTGTGTAAACCTTGTTCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033000.8 |
||
| CDS-3UTR GCA 90 bp | CCCCTACCTCTAATCCCTCCAGTAATTGGTTGCAGCCAATTTTATTTAACCAATGACACACAGGCCCTCTaGATCTCCCACAGTCACTGT | + |
|
Preference number: 4 (lower is better) Translates to: PLPLIPPVIGCSQFYLTNDTQAL*ISHSHC Trigger: ACAGTGACTGTGGGAGATGCAGAGGGCCTGTGTGTC...ATTGGTTAAATAAAATTGGCTGCAACCAATTACTGGAGGGATTAGAGGTAGGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033000.8 |
||
| CDS-3UTR GCA 90 bp | CCCCTACCTCTAATCCCTCCAGTAATTGGTTGCAGCCAATTTTATTTAACCAATTCTCCAGGTTGGGTCTaGTGTCCAGTCCCCTTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: PLPLIPPVIGCSQFYLTNSPGWV*CPVPFL Trigger: AAGGAAGGGGACTGGACAGCAGACCCAACCTGGAGA...ATTGGTTAAATAAAATTGGCTGCAACCAATTACTGGAGGGATTAGAGGTAGGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000033000.8 |
||
| CDS-3UTR CCA 90 bp | CACTGTAAATGCCAGGCTCAGAGGCCTCTTCTCACTATAGCTGGTTATTATATGCAGCTCCAAGCTCCATaGAGAATCAGCAGGAGTAAG | + |
|
Preference number: 4 (lower is better) Translates to: HCKCQAQRPLLTIAGYYMQLQAP*RISRSK Trigger: CTTACTCCTGCTGATTCTCCATGGAGCTTGGAGCTG...CATATAATAACCAGCTATAGTGAGAAGAGGCCTCTGAGCCTGGCATTTACAGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033000.8 ENSMUST00000206103.2 |
||
| CDS-3UTR CCA 90 bp | CACTGTAAATGCCAGGCTCAGAGGCCTCTTCTCACTATAGCTGGTTATTATATGCAGCATCCAGGTTCATaGCTGGATAGCCATCATCCT | + |
|
Preference number: 4 (lower is better) Translates to: HCKCQAQRPLLTIAGYYMQHPGS*LDSHHP Trigger: AGGATGATGGCTATCCAGCCATGAACCTGGATGCTG...CATATAATAACCAGCTATAGTGAGAAGAGGCCTCTGAGCCTGGCATTTACAGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033000.8 |
||
| 3UTR CAA 72 bp | ATGAATGACAGTAGTGGCAGCTGTACTTGGGATGTATaGTGGGGTAGGACAAGTCCTTCCCAGGTAAGACTT | + |
|
Preference number: 4 (lower is better) Translates to: MNDSSGSCTWDV*WGRTSPSQVRL Trigger: AAGTCTTACCTGGGAAGGACTTGTCCTACCCCACAATACATCCCAAGTACAGCTGCCACTACTGTCATTCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206234.2 |
||
| CDS-3UTR TCA 90 bp | CACTGTAAATGCCAGGCTCAGAGGCCTCTTCTCACTATAGCTGGTTATTATATGGGGTTCGTCATAAGCTaGGTCCCAGGAGATATCATA | + |
|
Preference number: 4 (lower is better) Translates to: HCKCQAQRPLLTIAGYYMGFVIS*VPGDII Trigger: TATGATATCTCCTGGGACTCAGCTTATGACGAACCC...CATATAATAACCAGCTATAGTGAGAAGAGGCCTCTGAGCCTGGCATTTACAGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033000.8 ENSMUST00000206103.2 |
||
| CDS-3UTR TCA 90 bp | CCCCTACCTCTAATCCCTCCAGTAATTGGTTGCAGCCAATTTTATTTAACCAATGATATCATAGCGTCCTaGGAAGGCCACAGTCACGTT | + |
|
Preference number: 4 (lower is better) Translates to: PLPLIPPVIGCSQFYLTNDIIAS*EGHSHV Trigger: AACGTGACTGTGGCCTTCTCAGGACGCTATGATATC...ATTGGTTAAATAAAATTGGCTGCAACCAATTACTGGAGGGATTAGAGGTAGGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033000.8 |
||
| CDS-3UTR TCA 90 bp | CACTGTAAATGCCAGGCTCAGAGGCCTCTTCTCACTATAGCTGGTTATTATATGAAGGTCTCTTGGTCCTaGAGTTCCTCATATTCATCT | + |
|
Preference number: 4 (lower is better) Translates to: HCKCQAQRPLLTIAGYYMKVSWS*SSSYSS Trigger: AGATGAATATGAGGAACTTCAGGACCAAGAGACCTT...CATATAATAACCAGCTATAGTGAGAAGAGGCCTCTGAGCCTGGCATTTACAGTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033000.8 ENSMUST00000206103.2 |
||
| CDS-3UTR TCA 90 bp | CCCCTACCTCTAATCCCTCCAGTAATTGGTTGCAGCCAATTTTATTTAACCAATAAGGTCTCTTGGTCCTaGAGTTCCTCATATTCATCT | + |
|
Preference number: 4 (lower is better) Translates to: PLPLIPPVIGCSQFYLTNKVSWS*SSSYSS Trigger: AGATGAATATGAGGAACTTCAGGACCAAGAGACCTT...ATTGGTTAAATAAAATTGGCTGCAACCAATTACTGGAGGGATTAGAGGTAGGGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033000.8 |
||
| CDS-3UTR CAA 90 bp | TGCTGTTTCTCCTGGCCACAGGCTCATGGTCCCTCTCCCCTCACGGCAGCCTCTACCCAGTTCTCCAGGTaGGGTCTGCTGTCCAGTCCC | + |
|
Preference number: 5 (lower is better) Translates to: CCFSWPQAHGPSPLTAASTQFSR*GLLSSP Trigger: GGGACTGGACAGCAGACCCAACCTGGAGAACTGGGT...AGAGGCTGCCGTGAGGGGAGAGGGACCATGAGCCTGTGGCCAGGAGAAACAGCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033000.8 |
||
| CDS-3UTR CAA 90 bp | GGCCACCTCCTCACCAGTGTACCCCAGATACTTGCTGTTTCTCCTGGCCACAGGCTGAGTATGCTGGGGTaGGGGCTCCGTGTCTCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: GHLLTSVPQILAVSPGHRLSMLG*GLRVSR Trigger: CCTGGAGACACGGAGCCCCAACCCCAGCATACTCAG...CCTGTGGCCAGGAGAAACAGCAAGTATCTGGGGTACACTGGTGAGGAGGTGGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000033000.8 |
||
| CDS-3UTR CAA 90 bp | TGCTGTTTCTCCTGGCCACAGGCTCATGGTCCCTCTCCCCTCACGGCAGCCTCTTCCATCACACTCCAGTaGCTCTTCCAGACCCGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: CCFSWPQAHGPSPLTAASSITLQ*LFQTRQ Trigger: CTGCCGGGTCTGGAAGAGCAACTGGAGTGTGATGGA...AGAGGCTGCCGTGAGGGGAGAGGGACCATGAGCCTGTGGCCAGGAGAAACAGCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033000.8 |
||
| CDS-3UTR CAA 90 bp | GCCACAGGCTCATGGTCCCTCTCCCCTCACGGCAGCCTCTCCTCTCCTCTCCTCGTATTAACCCATTTCTaGAAGTTCCCGCTGTGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: ATGSWSLSPHGSLSSPLLVLTHF*KFPLCS Trigger: GGAGCACAGCGGGAACTTCAAGAAATGGGTTAATAC...GAGGAGAGGAGAGGAGAGGCTGCCGTGAGGGGAGAGGGACCATGAGCCTGTGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033000.8 |
||
| CDS-3UTR CAA 90 bp | CAGCTGCCAAGGGGATTATGCACCAGTGACCAGGCTCAGACATTCCATCACACTCTGAGTATGCTGGGGTaGGGGCTCCGTGTCTCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: QLPRGLCTSDQAQTFHHTLSMLG*GLRVSR Trigger: CCTGGAGACACGGAGCCCCAACCCCAGCATACTCAG...AGTGTGATGGAATGTCTGAGCCTGGTCACTGGTGCATAATCCCCTTGGCAGCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000206103.2 |
||
| CDS-3UTR CAA 90 bp | GGCCAGACTCTCGGCCAGCATCCAGGTTCATGGCTGGATAGCCATCATCCTCACCACTCTTGGGAGTTGTaGCCAGACTGGTCCGTCACA | + |
|
Preference number: 5 (lower is better) Translates to: GQTLGQHPGSWLDSHHPHHSWEL*PDWSVT Trigger: TGTGACGGACCAGTCTGGCAACAACTCCCAAGAGTG...GTGAGGATGATGGCTATCCAGCCATGAACCTGGATGCTGGCCGAGAGTCTGGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206103.2 |
||
| CDS-3UTR CAA 90 bp | CTGGCCACCTCCTCACCAGTGTACCCCAGATACTTGCTGTTTCTCCTGGCCACACCACACTCTTGGGAGTaGTTGCCAGACTGGTCCGTC | + |
|
Preference number: 5 (lower is better) Translates to: LATSSPVYPRYLLFLLATPHSWE*LPDWSV Trigger: GACGGACCAGTCTGGCAACAACTCCCAAGAGTGTGG...TGTGGCCAGGAGAAACAGCAAGTATCTGGGGTACACTGGTGAGGAGGTGGCCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033000.8 |
||
| CDS-3UTR CAA 90 bp | CGAGGGGGTCCTTCATCAGTCTCCACGGGGCTGCCACAGTCTGAACCTGCAAAGAAAGCTGCCACACTCTaGGGAGTTGTTGCCAGACTG | + |
|
Preference number: 5 (lower is better) Translates to: RGGPSSVSTGLPQSEPAKKAATL*GVVARL Trigger: CAGTCTGGCAACAACTCCCAAGAGTGTGGCAGCTTT...CTTTGCAGGTTCAGACTGTGGCAGCCCCGTGGAGACTGATGAAGGACCCCCTCG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000206103.2 |
||
| CDS-3UTR CAA 90 bp | GAGGGGGTCCTTCATCAGTCTCCACGGGGCTGCCACAGTCTGAACCTGCAAAGCGCTGCAGAAGGTCTCTaGGTCCTGAAGTTCCTCATA | + |
|
Preference number: 5 (lower is better) Translates to: EGVLHQSPRGCHSLNLQSAAEGL*VLKFLI Trigger: TATGAGGAACTTCAGGACCAAGAGACCTTCTGCAGC...GCTTTGCAGGTTCAGACTGTGGCAGCCCCGTGGAGACTGATGAAGGACCCCCTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000206103.2 |
||
| CDS-3UTR CAA 90 bp | CTTCTAACTGCTGGCCTGGCCACCTCCTCACCAGTGTACCCCAGATACTTGCTGCACTCTTGGGAGTTGTaGCCAGACTGGTCCGTCACA | + |
|
Preference number: 5 (lower is better) Translates to: LLTAGLATSSPVYPRYLLHSWEL*PDWSVT Trigger: TGTGACGGACCAGTCTGGCAACAACTCCCAAGAGTG...CAGCAAGTATCTGGGGTACACTGGTGAGGAGGTGGCCAGGCCAGCAGTTAGAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033000.8 |
||
| CDS-3UTR CAA 90 bp | CTGCCAAGGGGATTATGCACCAGTGACCAGGCTCAGACATTCCATCACACTCCACCACACTCTTGGGAGTaGTTGCCAGACTGGTCCGTC | + |
|
Preference number: 5 (lower is better) Translates to: LPRGLCTSDQAQTFHHTPPHSWE*LPDWSV Trigger: GACGGACCAGTCTGGCAACAACTCCCAAGAGTGTGG...TGGAGTGTGATGGAATGTCTGAGCCTGGTCACTGGTGCATAATCCCCTTGGCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206103.2 |
||
| CDS-3UTR CAA 90 bp | GGGGTCCTTCATCAGTCTCCACGGGGCTGCCACAGTCTGAACCTGCAAAGCCACGAAGAGAGACGTTTCTaGAGTCCACTGAGATCAGCT | + |
|
Preference number: 5 (lower is better) Translates to: GVLHQSPRGCHSLNLQSHEERRF*SPLRSA Trigger: AGCTGATCTCAGTGGACTCAAGAAACGTCTCTCTTC...GTGGCTTTGCAGGTTCAGACTGTGGCAGCCCCGTGGAGACTGATGAAGGACCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000206103.2 |
||
| CDS-3UTR CAA 90 bp | CCTCCTCACCAGTGTACCCCAGATACTTGCTGTTTCTCCTGGCCACAGGCTCATAAAGCTGCCACACTCTaGGGAGTTGTTGCCAGACTG | + |
|
Preference number: 5 (lower is better) Translates to: PPHQCTPDTCCFSWPQAHKAATL*GVVARL Trigger: CAGTCTGGCAACAACTCCCAAGAGTGTGGCAGCTTT...ATGAGCCTGTGGCCAGGAGAAACAGCAAGTATCTGGGGTACACTGGTGAGGAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033000.8 |
||
| CDS-3UTR CAA 90 bp | CAGATACTTGCTGTTTCTCCTGGCCACAGGCTCATGGTCCCTCTCCCCTCACGGGGGAACTTCTTCTCCTaGGCTGGATACAATGACAGA | + |
|
Preference number: 5 (lower is better) Translates to: QILAVSPGHRLMVPLPSRGNFFS*AGYNDR Trigger: TCTGTCATTGTATCCAGCCAAGGAGAAGAAGTTCCC...CCGTGAGGGGAGAGGGACCATGAGCCTGTGGCCAGGAGAAACAGCAAGTATCTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033000.8 |
||
| CDS-3UTR CAA 90 bp | TCTAACTGCTGGCCTGGCCACCTCCTCACCAGTGTACCCCAGATACTTGCTGTTGCTGCAGAAGGTCTCTaGGTCCTGAAGTTCCTCATA | + |
|
Preference number: 5 (lower is better) Translates to: SNCWPGHLLTSVPQILAVAAEGL*VLKFLI Trigger: TATGAGGAACTTCAGGACCAAGAGACCTTCTGCAGC...AACAGCAAGTATCTGGGGTACACTGGTGAGGAGGTGGCCAGGCCAGCAGTTAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033000.8 |
||
| CDS-3UTR CAA 90 bp | GGCCAGACTCTCGGCCAGCATCCAGGTTCATGGCTGGATAGCCATCATCCTCACGACTGGTCCGTCACATaGACAATGAAAACTTCATCG | + |
|
Preference number: 5 (lower is better) Translates to: GQTLGQHPGSWLDSHHPHDWSVT*TMKTSS Trigger: CGATGAAGTTTTCATTGTCAATGTGACGGACCAGTC...GTGAGGATGATGGCTATCCAGCCATGAACCTGGATGCTGGCCGAGAGTCTGGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206103.2 |
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| CDS TCA 90 bp | GTGTTGTGGCCAGACCTGTGTAGGCTGCAGAAGGTCTCTTGGTCCTaGAGTTCCTCATATTCATCTTGCCAGGTGAGACTGAGTATGCTG | + |
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Preference number: 5 (lower is better) Translates to: VLWPDLCRLQKVSWS*SSSYSSCQVRLSML Trigger: CAGCATACTCAGTCTCACCTGGCAAGATGAATATGAGGAACTTCAGGACCAAGAGACCTTCTGCAGCCTACACAGGTCTGGCCACAACAC 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033000.8 ENSMUST00000206103.2 |
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| CDS TCA 90 bp | GTGTTGTGGCCAGACCTGTGTAGGCTGCAGAAGGTCTCTTGGTCCTaGAGTTCCTCATATTCATCTTGCCTCCATGGAGAATCAGCAGGA | + |
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Preference number: 5 (lower is better) Translates to: VLWPDLCRLQKVSWS*SSSYSSCLHGESAG Trigger: TCCTGCTGATTCTCCATGGAGGCAAGATGAATATGAGGAACTTCAGGACCAAGAGACCTTCTGCAGCCTACACAGGTCTGGCCACAACAC 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206234.2 |
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| CDS CCA 90 bp | GGAGCTGGTTTGATGCTCTCAGCCAGGACAAAGCTGCCACACTCTTaGGAGTTGTTGCCAGACTGGTCCGTCACATTGACAATGAAAACT | + |
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Preference number: 5 (lower is better) Translates to: GAGLMLSARTKLPHS*ELLPDWSVTLTMKT Trigger: AGTTTTCATTGTCAATGTGACGGACCAGTCTGGCAACAACTCCCAAGAGTGTGGCAGCTTTGTCCTGGCTGAGAGCATCAAACCAGCTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033000.8 ENSMUST00000206103.2 |
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| CDS CCA 90 bp | ACAGGAATTGAGACAAGCGCATATGGCACGTGTACCATATATGTGTaGTGTTGTGGCCAGACCTGTGTAGGCTGCAGAAGGTCTCTTGGT | + |
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Preference number: 5 (lower is better) Translates to: TGIETSAYGTCTIYV*CCGQTCVGCRRSLG Trigger: ACCAAGAGACCTTCTGCAGCCTACACAGGTCTGGCCACAACACCACACATATATGGTACACGTGCCATATGCGCTTGTCTCAATTCCTGT 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033000.8 ENSMUST00000206103.2 ENSMUST00000206234.2 |
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| CDS GCA 90 bp | ACGTGTACCATATATGTGTGGTGTTGTGGCCAGACCTGTGTAGGCTaGAGAAGGTCTCTTGGTCCTGAAGTTCCTCATATTCATCTTGCC | + |
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Preference number: 5 (lower is better) Translates to: TCTIYVWCCGQTCVG*RRSLGPEVPHIHLA Trigger: GGCAAGATGAATATGAGGAACTTCAGGACCAAGAGACCTTCTGCAGCCTACACAGGTCTGGCCACAACACCACACATATATGGTACACGT 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033000.8 ENSMUST00000206103.2 ENSMUST00000206234.2 |
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| CDS-3UTR CAA 90 bp | AGAAAAGCAGGGTCTGTGACCAAGAGCAGATCCTCTGAATTAGGGCCAGACTCTGTATTAACCCATTTCTaGAAGTTCCCGCTGTGCTCC | + |
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Preference number: 5 (lower is better) Translates to: RKAGSVTKSRSSELGPDSVLTHF*KFPLCS Trigger: GGAGCACAGCGGGAACTTCAAGAAATGGGTTAATAC...AGAGTCTGGCCCTAATTCAGAGGATCTGCTCTTGGTCACAGACCCTGCTTTTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206103.2 |
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| CDS-3UTR CAA 90 bp | CCCAGAGCCACCTGGTTTGCCCACCTTAACTCTAAGTTGGAAATACATCATGATGCTGCAGAAGGTCTCTaGGTCCTGAAGTTCCTCATA | + |
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Preference number: 5 (lower is better) Translates to: PRATWFAHLNSKLEIHHDAAEGL*VLKFLI Trigger: TATGAGGAACTTCAGGACCAAGAGACCTTCTGCAGC...ATCATGATGTATTTCCAACTTAGAGTTAAGGTGGGCAAACCAGGTGGCTCTGGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206234.2 |
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| CDS-3UTR CAA 90 bp | TCTCCTCTCTCCTTCTCCATCTCCAAACAGGTAACTCAAAAGCCCCCTACCTCTGACTGGTCCGTCACATaGACAATGAAAACTTCATCG | + |
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Preference number: 5 (lower is better) Translates to: SPLSFSISKQVTQKPPTSDWSVT*TMKTSS Trigger: CGATGAAGTTTTCATTGTCAATGTGACGGACCAGTC...AGAGGTAGGGGGCTTTTGAGTTACCTGTTTGGAGATGGAGAAGGAGAGAGGAGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000033000.8 |
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| CDS-3UTR CAA 90 bp | TTGCGCATCAGGGCTGGCAGACACTTTGAAATGAATGACAGTAGTGGCAGCTGTTTCCTCATATTCATCTaGCCTCCATGGAGAATCAGC | + |
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Preference number: 5 (lower is better) Translates to: LRIRAGRHFEMNDSSGSCFLIFI*PPWRIS Trigger: GCTGATTCTCCATGGAGGCAAGATGAATATGAGGAA...ACAGCTGCCACTACTGTCATTCATTTCAAAGTGTCTGCCAGCCCTGATGCGCAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206234.2 |
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| CDS TCA 90 bp | GACTGGTCCGTCACATTGACAATGAAAACTTCATCGGACAGGAATTaGGACAAGCGCATATGGCACGTGTACCATATATGTGTGGTGTTG | + |
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Preference number: 5 (lower is better) Translates to: DWSVTLTMKTSSDRN*DKRIWHVYHICVVL Trigger: CAACACCACACATATATGGTACACGTGCCATATGCGCTTGTCTCAATTCCTGTCCGATGAAGTTTTCATTGTCAATGTGACGGACCAGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033000.8 ENSMUST00000206103.2 |
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| CDS-3UTR CAA 90 bp | GGAACAAGGTTTACACAGCAAGTTTGTAAACATGAGAATTCACTCGTAGGCCTAGAAGAGAGACGTTTCTaGAGTCCACTGAGATCAGCT | + |
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Preference number: 5 (lower is better) Translates to: GTRFTQQVCKHENSLVGLEERRF*SPLRSA Trigger: AGCTGATCTCAGTGGACTCAAGAAACGTCTCTCTTC...TAGGCCTACGAGTGAATTCTCATGTTTACAAACTTGCTGTGTAAACCTTGTTCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033000.8 ENSMUST00000206103.2 |
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| CDS GCA 72 bp | GACAGCCAGGAGCAGCAGCATGTGAGGGTCCCAGCCTaGCTCGGGCTCCCCAGCCTGGGTCTGAAAGATGAC | + |
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Preference number: 6 (lower is better) Translates to: DSQEQQHVRVPA*LGLPSLGLKDD Trigger: GTCATCTTTCAGACCCAGGCTGGGGAGCCCGAGGCAGGCTGGGACCCTCACATGCTGCTGCTCCTGGCTGTC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033000.8 |
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| CDS CCA 72 bp | CGCATATGGCACGTGTACCATATATGTGTGGTGTTGTaGCCAGACCTGTGTAGGCTGCAGAAGGTCTCTTGG | + |
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Preference number: 6 (lower is better) Translates to: RIWHVYHICVVL*PDLCRLQKVSW Trigger: CCAAGAGACCTTCTGCAGCCTACACAGGTCTGGCCACAACACCACACATATATGGTACACGTGCCATATGCG 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033000.8 ENSMUST00000206103.2 ENSMUST00000206234.2 |
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| CDS CCA 72 bp | GAGACAAGCGCATATGGCACGTGTACCATATATGTGTaGTGTTGTGGCCAGACCTGTGTAGGCTGCAGAAGG | + |
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Preference number: 6 (lower is better) Translates to: ETSAYGTCTIYV*CCGQTCVGCRR Trigger: CCTTCTGCAGCCTACACAGGTCTGGCCACAACACCACACATATATGGTACACGTGCCATATGCGCTTGTCTC 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033000.8 ENSMUST00000206103.2 ENSMUST00000206234.2 |
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| CDS CCA 72 bp | TTGGTCCTGAAGTTCCTCATATTCATCTTGCCTCCATaGAGAATCAGCAGGAGTAAGGCAGCCACTGGGCCC | + |
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Preference number: 6 (lower is better) Translates to: LVLKFLIFILPP*RISRSKAATGP Trigger: GGGCCCAGTGGCTGCCTTACTCCTGCTGATTCTCCATGGAGGCAAGATGAATATGAGGAACTTCAGGACCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206234.2 |
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| CDS CAA 72 bp | TTTGATGCTCTCAGCCAGGACAAAGCTGCCACACTCTaGGGAGTTGTTGCCAGACTGGTCCGTCACATTGAC | + |
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Preference number: 6 (lower is better) Translates to: FDALSQDKAATL*GVVARLVRHID Trigger: GTCAATGTGACGGACCAGTCTGGCAACAACTCCCAAGAGTGTGGCAGCTTTGTCCTGGCTGAGAGCATCAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033000.8 ENSMUST00000206103.2 |
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| CDS CAA 90 bp | GGGAGCTGGTTTGATGCTCTCAGCCAGGACAAAGCTGCCACACTCTaGGGAGTTGTTGCCAGACTGGTCCGTCACATTGACAATGAAAAC | + |
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Preference number: 6 (lower is better) Translates to: GSWFDALSQDKAATL*GVVARLVRHIDNEN Trigger: GTTTTCATTGTCAATGTGACGGACCAGTCTGGCAACAACTCCCAAGAGTGTGGCAGCTTTGTCCTGGCTGAGAGCATCAAACCAGCTCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033000.8 ENSMUST00000206103.2 |
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| CDS TCA 72 bp | CCAGACCTGTGTAGGCTGCAGAAGGTCTCTTGGTCCTaGAGTTCCTCATATTCATCTTGCCAGGTGAGACTG | + |
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Preference number: 6 (lower is better) Translates to: PDLCRLQKVSWS*SSSYSSCQVRL Trigger: CAGTCTCACCTGGCAAGATGAATATGAGGAACTTCAGGACCAAGAGACCTTCTGCAGCCTACACAGGTCTGG 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033000.8 ENSMUST00000206103.2 |
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| CDS CAA 72 bp | AAGCGCATATGGCACGTGTACCATATATGTGTGGTGTaGTGGCCAGACCTGTGTAGGCTGCAGAAGGTCTCT | + |
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Preference number: 6 (lower is better) Translates to: KRIWHVYHICVV*WPDLCRLQKVS Trigger: AGAGACCTTCTGCAGCCTACACAGGTCTGGCCACAACACCACACATATATGGTACACGTGCCATATGCGCTT 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033000.8 ENSMUST00000206103.2 ENSMUST00000206234.2 |
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| CDS CAA 90 bp | TTGATGCTCTCAGCCAGGACAAAGCTGCCACACTCTTGGGAGTTGTaGCCAGACTGGTCCGTCACATTGACAATGAAAACTTCATCGGAC | + |
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Preference number: 6 (lower is better) Translates to: LMLSARTKLPHSWEL*PDWSVTLTMKTSSD Trigger: GTCCGATGAAGTTTTCATTGTCAATGTGACGGACCAGTCTGGCAACAACTCCCAAGAGTGTGGCAGCTTTGTCCTGGCTGAGAGCATCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033000.8 ENSMUST00000206103.2 |
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| CDS CAA 90 bp | GGTTTGATGCTCTCAGCCAGGACAAAGCTGCCACACTCTTGGGAGTaGTTGCCAGACTGGTCCGTCACATTGACAATGAAAACTTCATCG | + |
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Preference number: 6 (lower is better) Translates to: GLMLSARTKLPHSWE*LPDWSVTLTMKTSS Trigger: CGATGAAGTTTTCATTGTCAATGTGACGGACCAGTCTGGCAACAACTCCCAAGAGTGTGGCAGCTTTGTCCTGGCTGAGAGCATCAAACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033000.8 ENSMUST00000206103.2 |
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| CDS TCA 72 bp | CCAGACCTGTGTAGGCTGCAGAAGGTCTCTTGGTCCTaGAGTTCCTCATATTCATCTTGCCTCCATGGAGAA | + |
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Preference number: 6 (lower is better) Translates to: PDLCRLQKVSWS*SSSYSSCLHGE Trigger: TTCTCCATGGAGGCAAGATGAATATGAGGAACTTCAGGACCAAGAGACCTTCTGCAGCCTACACAGGTCTGG 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206234.2 |
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| CDS CCA 72 bp | ACAAAGCTGCCACACTCTTGGGAGTTGTTGCCAGACTaGTCCGTCACATTGACAATGAAAACTTCATCGGAC | + |
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Preference number: 6 (lower is better) Translates to: TKLPHSWELLPD*SVTLTMKTSSD Trigger: GTCCGATGAAGTTTTCATTGTCAATGTGACGGACCAGTCTGGCAACAACTCCCAAGAGTGTGGCAGCTTTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033000.8 ENSMUST00000206103.2 |
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| CDS CCA 72 bp | GGTGCCCATATCTTTTTCCATAGCCTCCAAGGCAGGTaGATCTTCAGACCCATGAAAACCAGGACAATGATC | + |
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Preference number: 6 (lower is better) Translates to: GAHIFFHSLQGR*IFRPMKTRTMI Trigger: GATCATTGTCCTGGTTTTCATGGGTCTGAAGATCCACCTGCCTTGGAGGCTATGGAAAAAGATATGGGCACC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033000.8 |
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| CDS GCA 72 bp | ATATATGTGTGGTGTTGTGGCCAGACCTGTGTAGGCTaGAGAAGGTCTCTTGGTCCTGAAGTTCCTCATATT | + |
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Preference number: 6 (lower is better) Translates to: IYVWCCGQTCVG*RRSLGPEVPHI Trigger: AATATGAGGAACTTCAGGACCAAGAGACCTTCTGCAGCCTACACAGGTCTGGCCACAACACCACACATATAT 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033000.8 ENSMUST00000206103.2 ENSMUST00000206234.2 |
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| CDS CAA 90 bp | AGACTGGTCCGTCACATTGACAATGAAAACTTCATCGGACAGGAATaGAGACAAGCGCATATGGCACGTGTACCATATATGTGTGGTGTT | + |
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Preference number: 6 (lower is better) Translates to: RLVRHIDNENFIGQE*RQAHMARVPYMCGV Trigger: AACACCACACATATATGGTACACGTGCCATATGCGCTTGTCTCAATTCCTGTCCGATGAAGTTTTCATTGTCAATGTGACGGACCAGTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033000.8 ENSMUST00000206103.2 |
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| CDS CAA 72 bp | CGTCACATTGACAATGAAAACTTCATCGGACAGGAATaGAGACAAGCGCATATGGCACGTGTACCATATATG | + |
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Preference number: 6 (lower is better) Translates to: RHIDNENFIGQE*RQAHMARVPYM Trigger: CATATATGGTACACGTGCCATATGCGCTTGTCTCAATTCCTGTCCGATGAAGTTTTCATTGTCAATGTGACG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033000.8 ENSMUST00000206103.2 |
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| CDS TCA 72 bp | GTCACATTGACAATGAAAACTTCATCGGACAGGAATTaGGACAAGCGCATATGGCACGTGTACCATATATGT | + |
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Preference number: 6 (lower is better) Translates to: VTLTMKTSSDRN*DKRIWHVYHIC Trigger: ACATATATGGTACACGTGCCATATGCGCTTGTCTCAATTCCTGTCCGATGAAGTTTTCATTGTCAATGTGAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033000.8 ENSMUST00000206103.2 |
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