Pregenerated sensors for IL20RB (Mus musculus)
Ensembl gene IDs: ENSMUSG00000044244Ensembl transcript IDs: ENSMUST00000098458.4
Found 99 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | ATGACATTTCATGAACCCACAGCAGCATCCGCGCATGTCCCATCATaGACGGGCTACGGCCTCTCTCGATGTCACCCTCAGCAGAGCGTG | + |
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Preference number: 1 (lower is better) Translates to: MTFHEPTAASAHVPS*TGYGLSRCHPQQSV Trigger: CACGCTCTGCTGAGGGTGACATCGAGAGAGGCCGTAGCCCGTCCATGATGGGACATGCGCGGATGCTGCTGTGGGTTCATGAAATGTCAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098458.4 |
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| 3UTR TCA 90 bp | CACCTGGTTGAAACCGTTACACTGTCTCTACCCTTGTCTGGCTGGTaGAGCCCAGGAAGTTGGGGCAGAGACAAGCCAGCTCCAGGTTCC | + |
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Preference number: 1 (lower is better) Translates to: HLVETVTLSLPLSGW*SPGSWGRDKPAPGS Trigger: GGAACCTGGAGCTGGCTTGTCTCTGCCCCAACTTCCTGGGCTTCACCAGCCAGACAAGGGTAGAGACAGTGTAACGGTTTCAACCAGGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098458.4 |
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| 3UTR TCA 90 bp | GAGGCCGTTGGCATCTGTGCTGAAGACGGACTGGAAGCACCTGGTTaGAACCGTTACACTGTCTCTACCCTTGTCTGGCTGGTGAAGCCC | + |
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Preference number: 1 (lower is better) Translates to: EAVGICAEDGLEAPG*NRYTVSTLVWLVKP Trigger: GGGCTTCACCAGCCAGACAAGGGTAGAGACAGTGTAACGGTTTCAACCAGGTGCTTCCAGTCCGTCTTCAGCACAGATGCCAACGGCCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098458.4 |
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| 3UTR GCA 90 bp | CACACGCGTATGCCCCACAGTCCGCATGATCTGAACTCACCGTTGTaGACAGTGCCACCAGTCTCCTTGCCAACCTGCAAGTGCGAGTTT | + |
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Preference number: 1 (lower is better) Translates to: HTRMPHSPHDLNSPL*TVPPVSLPTCKCEF Trigger: AAACTCGCACTTGCAGGTTGGCAAGGAGACTGGTGGCACTGTGCACAACGGTGAGTTCAGATCATGCGGACTGTGGGGCATACGCGTGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098458.4 |
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| 3UTR TCA 90 bp | CTTGTAAAGAGGGAAGTCCAAACCAACAGTGGTCTGAGTTTGATTTaGCAAAAGGAGGTTTATTACTCTTGGTTGTTCGGTTGTTTACTT | + |
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Preference number: 1 (lower is better) Translates to: LVKREVQTNSGLSLI*QKEVYYSWLFGCLL Trigger: AAGTAAACAACCGAACAACCAAGAGTAATAAACCTCCTTTTGTCAAATCAAACTCAGACCACTGTTGGTTTGGACTTCCCTCTTTACAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098458.4 |
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| 3UTR CAA 90 bp | CGTTACACTGTCTCTACCCTTGTCTGGCTGGTGAAGCCCAGGAAGTaGGGGCAGAGACAAGCCAGCTCCAGGTTCCAGAGGGGGAGGTGG | + |
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Preference number: 2 (lower is better) Translates to: RYTVSTLVWLVKPRK*GQRQASSRFQRGRW Trigger: CCACCTCCCCCTCTGGAACCTGGAGCTGGCTTGTCTCTGCCCCAACTTCCTGGGCTTCACCAGCCAGACAAGGGTAGAGACAGTGTAACG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000098458.4 |
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| 3UTR-3UTR GCA 90 bp | CTGTCCTCCACCCCTCCCTCGCTGCCTGGAGGTAGTGATGGTTATGCCTCTAGTTGCCACCAGTCTCCTTaGCAACCTGCAAGTGCGAGT | + |
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Preference number: 2 (lower is better) Translates to: LSSTPPSLPGGSDGYASSCHQSP*QPASAS Trigger: ACTCGCACTTGCAGGTTGGCAAGGAGACTGGTGGCA...ACTAGAGGCATAACCATCACTACCTCCAGGCAGCGAGGGAGGGGTGGAGGACAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098458.4 |
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| 3UTR-3UTR TCA 90 bp | ATGACATTTCATGAACCCACAGCAGCATCCGCGCATGTCCCATCATGGACGGGCGTGTCGTCTAGGCTGTaGTTTTCTCTCCCGCTCCTC | + |
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Preference number: 2 (lower is better) Translates to: MTFHEPTAASAHVPSWTGVSSRL*FSLPLL Trigger: GAGGAGCGGGAGAGAAAATCACAGCCTAGACGACAC...GCCCGTCCATGATGGGACATGCGCGGATGCTGCTGTGGGTTCATGAAATGTCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098458.4 |
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| 3UTR-3UTR TCA 90 bp | AAACCGTTACACTGTCTCTACCCTTGTCTGGCTGGTGAAGCCCAGGAAGTTGGGTCATCCTCCTCTGACTaGAGCTGTCCTCCACCCCTC | + |
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Preference number: 2 (lower is better) Translates to: KPLHCLYPCLAGEAQEVGSSSSD*SCPPPL Trigger: GAGGGGTGGAGGACAGCTTCAGTCAGAGGAGGATGA...CCCAACTTCCTGGGCTTCACCAGCCAGACAAGGGTAGAGACAGTGTAACGGTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098458.4 |
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| 3UTR-3UTR GCA 90 bp | ACATTTCATGAACCCACAGCAGCATCCGCGCATGTCCCATCATGGACGGGCTACCACCGTTGTGCACAGTaGCACCAGTCTCCTTGCCAA | + |
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Preference number: 2 (lower is better) Translates to: TFHEPTAASAHVPSWTGYHRCAQ*HQSPCQ Trigger: TTGGCAAGGAGACTGGTGGCACTGTGCACAACGGTG...GTAGCCCGTCCATGATGGGACATGCGCGGATGCTGCTGTGGGTTCATGAAATGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098458.4 |
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| 3UTR-3UTR GCA 90 bp | ACATTTCATGAACCCACAGCAGCATCCGCGCATGTCCCATCATGGACGGGCTACCTGAACTCACCGTTGTaGACAGTGCCACCAGTCTCC | + |
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Preference number: 2 (lower is better) Translates to: TFHEPTAASAHVPSWTGYLNSPL*TVPPVS Trigger: GGAGACTGGTGGCACTGTGCACAACGGTGAGTTCAG...GTAGCCCGTCCATGATGGGACATGCGCGGATGCTGCTGTGGGTTCATGAAATGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098458.4 |
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| 3UTR-3UTR CCA 90 bp | CATTTAATCCCCACTACAGGTGACAAAGCGGGGGTCCGAGGTATGAAGCCATTTCCCCATCCAGGGTTCTaGGTCCTGCAGACCAGGCTG | + |
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Preference number: 2 (lower is better) Translates to: HLIPTTGDKAGVRGMKPFPHPGF*VLQTRL Trigger: CAGCCTGGTCTGCAGGACCCAGAACCCTGGATGGGG...AAATGGCTTCATACCTCGGACCCCCGCTTTGTCACCTGTAGTGGGGATTAAATG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000098458.4 |
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| 3UTR-3UTR CCA 90 bp | CCACAGCAGCATCCGCGCATGTCCCATCATGGACGGGCTACGGCCTCTCTCGATGTTGTTTACTTCAGATaGGGTTTCACCGTGTCGTCT | + |
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Preference number: 2 (lower is better) Translates to: PQQHPRMSHHGRATASLDVVYFR*GFTVSS Trigger: AGACGACACGGTGAAACCCCATCTGAAGTAAACAAC...ATCGAGAGAGGCCGTAGCCCGTCCATGATGGGACATGCGCGGATGCTGCTGTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098458.4 |
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| 3UTR CAA 90 bp | CCCCTACATATCTCTCCTGGAGTCCCCAAAGTAGAGATGAGGCCGTaGGCATCTGTGCTGAAGACGGACTGGAAGCACCTGGTTGAAACC | + |
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Preference number: 2 (lower is better) Translates to: PLHISPGVPKVEMRP*ASVLKTDWKHLVET Trigger: GGTTTCAACCAGGTGCTTCCAGTCCGTCTTCAGCACAGATGCCAACGGCCTCATCTCTACTTTGGGGACTCCAGGAGAGATATGTAGGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098458.4 |
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| 3UTR-3UTR TCA 90 bp | CTGTCCTCCACCCCTCCCTCGCTGCCTGGAGGTAGTGATGGTTATGCCTCTAGTCTGAGAAACCCTGAGTaGATTGTCCTTAGGAAGAGA | + |
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Preference number: 2 (lower is better) Translates to: LSSTPPSLPGGSDGYASSLRNPE*IVLRKR Trigger: TCTCTTCCTAAGGACAATTCACTCAGGGTTTCTCAG...ACTAGAGGCATAACCATCACTACCTCCAGGCAGCGAGGGAGGGGTGGAGGACAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098458.4 |
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| 3UTR-3UTR CCA 90 bp | ACACCCCTACATATCTCTCCTGGAGTCCCCAAAGTAGAGATGAGGCCGTTGGCATCTGTCACTCTTGGATaGTCACGCCACTCTGCCTCT | + |
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Preference number: 2 (lower is better) Translates to: TPLHISPGVPKVEMRPLASVTLG*SRHSAS Trigger: AGAGGCAGAGTGGCGTGACCATCCAAGAGTGACAGA...TGCCAACGGCCTCATCTCTACTTTGGGGACTCCAGGAGAGATATGTAGGGGTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098458.4 |
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| 3UTR-3UTR TCA 90 bp | CCTCCACCCCTCCCTCGCTGCCTGGAGGTAGTGATGGTTATGCCTCTAGTCAGGGTATACACACAGAGATaGGGGGAGAAACCATTTAAT | + |
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Preference number: 2 (lower is better) Translates to: PPPLPRCLEVVMVMPLVRVYTQR*GEKPFN Trigger: ATTAAATGGTTTCTCCCCTCATCTCTGTGTGTATAC...CCTGACTAGAGGCATAACCATCACTACCTCCAGGCAGCGAGGGAGGGGTGGAGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000098458.4 |
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| 3UTR-3UTR TCA 90 bp | AAACCGTTACACTGTCTCTACCCTTGTCTGGCTGGTGAAGCCCAGGAAGTTGGGGGATTTGGCTTGAAGTaGAACAGCCCTCCCATTCTT | + |
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Preference number: 2 (lower is better) Translates to: KPLHCLYPCLAGEAQEVGGFGLK*NSPPIL Trigger: AAGAATGGGAGGGCTGTTTCACTTCAAGCCAAATCC...CCCAACTTCCTGGGCTTCACCAGCCAGACAAGGGTAGAGACAGTGTAACGGTTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000098458.4 |
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| 3UTR-3UTR GCA 90 bp | ATGACATTTCATGAACCCACAGCAGCATCCGCGCATGTCCCATCATGGACGGGCTTGCCAACCTGCAAGTaGGAGTTTGTATACACACAG | + |
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Preference number: 2 (lower is better) Translates to: MTFHEPTAASAHVPSWTGLPTCK*EFVYTQ Trigger: CTGTGTGTATACAAACTCGCACTTGCAGGTTGGCAA...GCCCGTCCATGATGGGACATGCGCGGATGCTGCTGTGGGTTCATGAAATGTCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098458.4 |
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| 3UTR CAA 90 bp | TGTGCACAGTGCCACCAGTCTCCTTGCCAACCTGCAAGTGCGAGTTaGTATACACACAGAGATGAGGGGAGAAACCATTTAATCCCCACT | + |
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Preference number: 2 (lower is better) Translates to: CAQCHQSPCQPASAS*YTHRDEGRNHLIPT Trigger: AGTGGGGATTAAATGGTTTCTCCCCTCATCTCTGTGTGTATACAAACTCGCACTTGCAGGTTGGCAAGGAGACTGGTGGCACTGTGCACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098458.4 |
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| 3UTR-3UTR CCA 90 bp | CCTCCTCGGGTTTCCTCTTGTAAAGAGGGAAGTCCAAACCAACAGTGGTCTGAGTATTTCTGTCACTCTTaGATGGTCACGCCACTCTGC | + |
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Preference number: 2 (lower is better) Translates to: PPRVSSCKEGSPNQQWSEYFCHS*MVTPLC Trigger: GCAGAGTGGCGTGACCATCCAAGAGTGACAGAAATA...CTCAGACCACTGTTGGTTTGGACTTCCCTCTTTACAAGAGGAAACCCGAGGAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098458.4 |
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| 3UTR CAA 90 bp | GAGTTTGATTTGACAAAAGGAGGTTTATTACTCTTGGTTGTTCGGTaGTTTACTTCAGATGGGGTTTCACCGTGTCGTCTAGGCTGTGAT | + |
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Preference number: 2 (lower is better) Translates to: EFDLTKGGLLLLVVR*FTSDGVSPCRLGCD Trigger: ATCACAGCCTAGACGACACGGTGAAACCCCATCTGAAGTAAACAACCGAACAACCAAGAGTAATAAACCTCCTTTTGTCAAATCAAACTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098458.4 |
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| 3UTR CAA 90 bp | TCTTGTAAAGAGGGAAGTCCAAACCAACAGTGGTCTGAGTTTGATTaGACAAAAGGAGGTTTATTACTCTTGGTTGTTCGGTTGTTTACT | + |
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Preference number: 2 (lower is better) Translates to: SCKEGSPNQQWSEFD*TKGGLLLLVVRLFT Trigger: AGTAAACAACCGAACAACCAAGAGTAATAAACCTCCTTTTGTCAAATCAAACTCAGACCACTGTTGGTTTGGACTTCCCTCTTTACAAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098458.4 |
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| 3UTR-3UTR CAA 90 bp | CCACAGCAGCATCCGCGCATGTCCCATCATGGACGGGCTACGGCCTCTCTCGATGTGCCACCAGTCTCCTaGCCAACCTGCAAGTGCGAG | + |
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Preference number: 3 (lower is better) Translates to: PQQHPRMSHHGRATASLDVPPVS*PTCKCE Trigger: CTCGCACTTGCAGGTTGGCAAGGAGACTGGTGGCAC...ATCGAGAGAGGCCGTAGCCCGTCCATGATGGGACATGCGCGGATGCTGCTGTGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098458.4 |
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| 3UTR CCA 72 bp | CATGAACCCACAGCAGCATCCGCGCATGTCCCATCATaGACGGGCTACGGCCTCTCTCGATGTCACCCTCAG | + |
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Preference number: 3 (lower is better) Translates to: HEPTAASAHVPS*TGYGLSRCHPQ Trigger: CTGAGGGTGACATCGAGAGAGGCCGTAGCCCGTCCATGATGGGACATGCGCGGATGCTGCTGTGGGTTCATG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098458.4 |
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| 3UTR TCA 72 bp | CCTCAGCAGAGCGTGCTGACAGGATTTGGCTTGAAGTaGAACAGCCCTCCCATTCTTCCGTCCCTCCTCGGG | + |
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Preference number: 3 (lower is better) Translates to: PQQSVLTGFGLK*NSPPILPSLLG Trigger: CCCGAGGAGGGACGGAAGAATGGGAGGGCTGTTTCACTTCAAGCCAAATCCTGTCAGCACGCTCTGCTGAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098458.4 |
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| 3UTR TCA 72 bp | TTCTGTCACTCTTGGATGGTCACGCCACTCTGCCTCTaGCGGTCACTGCTAGACGTGCACACAGTAGGCTCC | + |
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Preference number: 3 (lower is better) Translates to: FCHSWMVTPLCL*RSLLDVHTVGS Trigger: GGAGCCTACTGTGTGCACGTCTAGCAGTGACCGTCAGAGGCAGAGTGGCGTGACCATCCAAGAGTGACAGAA 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098458.4 |
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| 3UTR TCA 72 bp | CTTAGCACACGCGTATGCCCCACAGTCCGCATGATCTaGACTCACCGTTGTGCACAGTGCCACCAGTCTCCT | + |
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Preference number: 3 (lower is better) Translates to: LSTRVCPTVRMI*THRCAQCHQSP Trigger: AGGAGACTGGTGGCACTGTGCACAACGGTGAGTTCAGATCATGCGGACTGTGGGGCATACGCGTGTGCTAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098458.4 |
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| 3UTR GCA 72 bp | ATGCCCCACAGTCCGCATGATCTGAACTCACCGTTGTaGACAGTGCCACCAGTCTCCTTGCCAACCTGCAAG | + |
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Preference number: 3 (lower is better) Translates to: MPHSPHDLNSPL*TVPPVSLPTCK Trigger: CTTGCAGGTTGGCAAGGAGACTGGTGGCACTGTGCACAACGGTGAGTTCAGATCATGCGGACTGTGGGGCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098458.4 |
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| 3UTR TCA 72 bp | GGCATCTGTGCTGAAGACGGACTGGAAGCACCTGGTTaGAACCGTTACACTGTCTCTACCCTTGTCTGGCTG | + |
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Preference number: 3 (lower is better) Translates to: GICAEDGLEAPG*NRYTVSTLVWL Trigger: CAGCCAGACAAGGGTAGAGACAGTGTAACGGTTTCAACCAGGTGCTTCCAGTCCGTCTTCAGCACAGATGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098458.4 |
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| 3UTR CCA 72 bp | CCCTACATATCTGCCCACACCCCTACATATCTCTCCTaGAGTCCCCAAAGTAGAGATGAGGCCGTTGGCATC | + |
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Preference number: 3 (lower is better) Translates to: PYISAHTPTYLS*SPQSRDEAVGI Trigger: GATGCCAACGGCCTCATCTCTACTTTGGGGACTCCAGGAGAGATATGTAGGGGTGTGGGCAGATATGTAGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098458.4 |
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| 3UTR-3UTR CAA 90 bp | ACATTTCATGAACCCACAGCAGCATCCGCGCATGTCCCATCATGGACGGGCTACTCCTGTTACTTCTCTTaGTCTTTTGTCCACAGAGGA | + |
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Preference number: 3 (lower is better) Translates to: TFHEPTAASAHVPSWTGYSCYFS*SFVHRG Trigger: TCCTCTGTGGACAAAAGACAAAGAGAAGTAACAGGA...GTAGCCCGTCCATGATGGGACATGCGCGGATGCTGCTGTGGGTTCATGAAATGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098458.4 |
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| 3UTR TCA 72 bp | ACCCTGAGTGAATTGTCCTTAGGAAGAGAGCTGGTGTaGTTTACTGTGGACAAGGTCCTAGGATCTGATGAC | + |
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Preference number: 3 (lower is better) Translates to: TLSELSLGRELV*FTVDKVLGSDD Trigger: GTCATCAGATCCTAGGACCTTGTCCACAGTAAATCACACCAGCTCTCTTCCTAAGGACAATTCACTCAGGGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098458.4 |
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| 3UTR-3UTR CAA 90 bp | TTTACTTCAGATGGGGTTTCACCGTGTCGTCTAGGCTGTGATTTTCTCTCCCGCACTTCTCTTTGTCTTTaGTCCACAGAGGAAAACAGA | + |
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Preference number: 3 (lower is better) Translates to: FTSDGVSPCRLGCDFLSRTSLCL*STEENR Trigger: TCTGTTTTCCTCTGTGGACAAAAGACAAAGAGAAGT...GCGGGAGAGAAAATCACAGCCTAGACGACACGGTGAAACCCCATCTGAAGTAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000098458.4 |
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| 3UTR TCA 72 bp | AGGGAAGTCCAAACCAACAGTGGTCTGAGTTTGATTTaGCAAAAGGAGGTTTATTACTCTTGGTTGTTCGGT | + |
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Preference number: 3 (lower is better) Translates to: REVQTNSGLSLI*QKEVYYSWLFG Trigger: ACCGAACAACCAAGAGTAATAAACCTCCTTTTGTCAAATCAAACTCAGACCACTGTTGGTTTGGACTTCCCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098458.4 |
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| 3UTR CCA 72 bp | GTTTCCTCTTGTAAAGAGGGAAGTCCAAACCAACAGTaGTCTGAGTTTGATTTGACAAAAGGAGGTTTATTA | + |
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Preference number: 3 (lower is better) Translates to: VSSCKEGSPNQQ*SEFDLTKGGLL Trigger: TAATAAACCTCCTTTTGTCAAATCAAACTCAGACCACTGTTGGTTTGGACTTCCCTCTTTACAAGAGGAAAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098458.4 |
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| 3UTR CAA 72 bp | GTCTCTACCCTTGTCTGGCTGGTGAAGCCCAGGAAGTaGGGGCAGAGACAAGCCAGCTCCAGGTTCCAGAGG | + |
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Preference number: 4 (lower is better) Translates to: VSTLVWLVKPRK*GQRQASSRFQR Trigger: CCTCTGGAACCTGGAGCTGGCTTGTCTCTGCCCCAACTTCCTGGGCTTCACCAGCCAGACAAGGGTAGAGAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098458.4 |
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| CDS-3UTR TCA 90 bp | CCACAGCAGCATCCGCGCATGTCCCATCATGGACGGGCTACGGCCTCTCTCGATTGTACAGAGAGGTTCTaGGGGGCAGGTAAAACGGAC | + |
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Preference number: 4 (lower is better) Translates to: PQQHPRMSHHGRATASLDCTERF*GAGKTD Trigger: GTCCGTTTTACCTGCCCCTCAGAACCTCTCTGTACA...ATCGAGAGAGGCCGTAGCCCGTCCATGATGGGACATGCGCGGATGCTGCTGTGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000098458.4 |
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| CDS-3UTR GCA 90 bp | ATGACATTTCATGAACCCACAGCAGCATCCGCGCATGTCCCATCATGGACGGGCTGGCTGAAGGCACTGTaGCTCCCGATGGCTTTCACC | + |
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Preference number: 4 (lower is better) Translates to: MTFHEPTAASAHVPSWTGWLKAL*LPMAFT Trigger: GGTGAAAGCCATCGGGAGGCACAGTGCCTTCAGCCA...GCCCGTCCATGATGGGACATGCGCGGATGCTGCTGTGGGTTCATGAAATGTCAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098458.4 |
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| CDS-3UTR CCA 90 bp | ACATTTCATGAACCCACAGCAGCATCCGCGCATGTCCCATCATGGACGGGCTACCCCCGGCTGGGTCACTaGGTTCCACATCAAGAGATG | + |
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Preference number: 4 (lower is better) Translates to: TFHEPTAASAHVPSWTGYPRLGH*VPHQEM Trigger: CATCTCTTGATGTGGAACCCAGTGACCCAGCCGGGG...GTAGCCCGTCCATGATGGGACATGCGCGGATGCTGCTGTGGGTTCATGAAATGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000098458.4 |
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| CDS-3UTR TCA 90 bp | ACATTTCATGAACCCACAGCAGCATCCGCGCATGTCCCATCATGGACGGGCTACTTGGTCGGTGAGCATTaGCTGCTGGGGATCCAGATG | + |
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Preference number: 4 (lower is better) Translates to: TFHEPTAASAHVPSWTGYLVGEH*LLGIQM Trigger: CATCTGGATCCCCAGCAGTCAATGCTCACCGACCAA...GTAGCCCGTCCATGATGGGACATGCGCGGATGCTGCTGTGGGTTCATGAAATGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098458.4 |
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| CDS-3UTR TCA 90 bp | AAACCGTTACACTGTCTCTACCCTTGTCTGGCTGGTGAAGCCCAGGAAGTTGGGCCATCCTGGGTGGGGTaGGGACAGTTGCATTTCGGT | + |
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Preference number: 4 (lower is better) Translates to: KPLHCLYPCLAGEAQEVGPSWVG*GQLHFG Trigger: ACCGAAATGCAACTGTCCTCACCCCACCCAGGATGG...CCCAACTTCCTGGGCTTCACCAGCCAGACAAGGGTAGAGACAGTGTAACGGTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098458.4 |
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| CDS-3UTR CCA 90 bp | ACATTTCATGAACCCACAGCAGCATCCGCGCATGTCCCATCATGGACGGGCTACACAAGGAACTCAAACTaGGGCCCCAGGTCTTCCAGC | + |
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Preference number: 4 (lower is better) Translates to: TFHEPTAASAHVPSWTGYTRNSN*GPRSSS Trigger: GCTGGAAGACCTGGGGCCCCAGTTTGAGTTCCTTGT...GTAGCCCGTCCATGATGGGACATGCGCGGATGCTGCTGTGGGTTCATGAAATGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098458.4 |
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| CDS-3UTR CCA 90 bp | AAACCGTTACACTGTCTCTACCCTTGTCTGGCTGGTGAAGCCCAGGAAGTTGGGTGGCCCCCGGTTCCATaGTTTCTAGGTGCACCGGAA | + |
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Preference number: 4 (lower is better) Translates to: KPLHCLYPCLAGEAQEVGWPPVP*FLGAPE Trigger: TTCCGGTGCACCTAGAAACCATGGAACCGGGGGCCA...CCCAACTTCCTGGGCTTCACCAGCCAGACAAGGGTAGAGACAGTGTAACGGTTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000098458.4 |
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| CDS-3UTR TCA 90 bp | CCTCCACCCCTCCCTCGCTGCCTGGAGGTAGTGATGGTTATGCCTCTAGTCAGGATGCTTCATGTTGGTTaGCTGTACAGAGAGGTTCTG | + |
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Preference number: 4 (lower is better) Translates to: PPPLPRCLEVVMVMPLVRMLHVG*LYREVL Trigger: CAGAACCTCTCTGTACAGTCAACCAACATGAAGCAT...CCTGACTAGAGGCATAACCATCACTACCTCCAGGCAGCGAGGGAGGGGTGGAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098458.4 |
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| CDS-3UTR TCA 90 bp | GTGCACAGTGCCACCAGTCTCCTTGCCAACCTGCAAGTGCGAGTTTGTATACACCCTCCTTCCTGCAGCTaGTCAGCTTCTGAGACGAAC | + |
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Preference number: 4 (lower is better) Translates to: VHSATSLLANLQVRVCIHPPSCS*SASETN Trigger: GTTCGTCTCAGAAGCTGATCAGCTGCAGGAAGGAGG...GTGTATACAAACTCGCACTTGCAGGTTGGCAAGGAGACTGGTGGCACTGTGCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098458.4 |
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| CDS-3UTR GCA 90 bp | ACCTGGTTGAAACCGTTACACTGTCTCTACCCTTGTCTGGCTGGTGAAGCCCAGTCGGTGAGCATTGACTaGTGGGGATCCAGATGTGGC | + |
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Preference number: 4 (lower is better) Translates to: TWLKPLHCLYPCLAGEAQSVSID*WGSRCG Trigger: GCCACATCTGGATCCCCAGCAGTCAATGCTCACCGA...CTGGGCTTCACCAGCCAGACAAGGGTAGAGACAGTGTAACGGTTTCAACCAGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098458.4 |
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| CDS-3UTR CCA 90 bp | CCACAGCAGCATCCGCGCATGTCCCATCATGGACGGGCTACGGCCTCTCTCGATAGAGATGCTTCATGTTaGTTGACTGTACAGAGAGGT | + |
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Preference number: 4 (lower is better) Translates to: PQQHPRMSHHGRATASLDRDASC*LTVQRG Trigger: ACCTCTCTGTACAGTCAACCAACATGAAGCATCTCT...ATCGAGAGAGGCCGTAGCCCGTCCATGATGGGACATGCGCGGATGCTGCTGTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098458.4 |
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| CDS-3UTR CCA 90 bp | AAACCGTTACACTGTCTCTACCCTTGTCTGGCTGGTGAAGCCCAGGAAGTTGGGCTGGGGATCCAGATGTaGCTCATGTACAGGCTCTCG | + |
|
Preference number: 4 (lower is better) Translates to: KPLHCLYPCLAGEAQEVGLGIQM*LMYRLS Trigger: CGAGAGCCTGTACATGAGCCACATCTGGATCCCCAG...CCCAACTTCCTGGGCTTCACCAGCCAGACAAGGGTAGAGACAGTGTAACGGTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098458.4 |
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| CDS-3UTR GCA 90 bp | ACCTGGTTGAAACCGTTACACTGTCTCTACCCTTGTCTGGCTGGTGAAGCCCAGTCCATGGTTTCTAGGTaGACCGGAATGTCCCCACTC | + |
|
Preference number: 4 (lower is better) Translates to: TWLKPLHCLYPCLAGEAQSMVSR*TGMSPL Trigger: GAGTGGGGACATTCCGGTGCACCTAGAAACCATGGA...CTGGGCTTCACCAGCCAGACAAGGGTAGAGACAGTGTAACGGTTTCAACCAGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098458.4 |
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| CDS-3UTR GCA 90 bp | AAACCGTTACACTGTCTCTACCCTTGTCTGGCTGGTGAAGCCCAGGAAGTTGGGGCTTTCACCAGTGCCTaGGCCTTCACACAGTACATG | + |
|
Preference number: 4 (lower is better) Translates to: KPLHCLYPCLAGEAQEVGAFTSA*AFTQYM Trigger: CATGTACTGTGTGAAGGCGCAGGCACTGGTGAAAGC...CCCAACTTCCTGGGCTTCACCAGCCAGACAAGGGTAGAGACAGTGTAACGGTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098458.4 |
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| CDS-3UTR GCA 90 bp | CCTTGCCAACCTGCAAGTGCGAGTTTGTATACACACAGAGATGAGGGGAGAAACCAGACCCCAAAGAGATaGTCCGAGGACAGCACAGCC | + |
|
Preference number: 4 (lower is better) Translates to: PCQPASASLYTHRDEGRNQTPKR*SEDSTA Trigger: GGCTGTGCTGTCCTCGGAGCATCTCTTTGGGGTCTG...GTTTCTCCCCTCATCTCTGTGTGTATACAAACTCGCACTTGCAGGTTGGCAAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098458.4 |
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| CDS-3UTR CCA 90 bp | ACACCCCTACATATCTCTCCTGGAGTCCCCAAAGTAGAGATGAGGCCGTTGGCAGTGAGCATTGACTGCTaGGGATCCAGATGTGGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: TPLHISPGVPKVEMRPLAVSIDC*GSRCGS Trigger: TGAGCCACATCTGGATCCCCAGCAGTCAATGCTCAC...TGCCAACGGCCTCATCTCTACTTTGGGGACTCCAGGAGAGATATGTAGGGGTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098458.4 |
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| CDS-3UTR CCA 90 bp | ACACCCCTACATATCTCTCCTGGAGTCCCCAAAGTAGAGATGAGGCCGTTGGCACCTTCACACAGTACATaGCCCCCGGTTCCATGGTTT | + |
|
Preference number: 4 (lower is better) Translates to: TPLHISPGVPKVEMRPLAPSHST*PPVPWF Trigger: AAACCATGGAACCGGGGGCCATGTACTGTGTGAAGG...TGCCAACGGCCTCATCTCTACTTTGGGGACTCCAGGAGAGATATGTAGGGGTGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000098458.4 |
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| 3UTR CAA 72 bp | CTGAACTCACCGTTGTGCACAGTGCCACCAGTCTCCTaGCCAACCTGCAAGTGCGAGTTTGTATACACACAG | + |
|
Preference number: 4 (lower is better) Translates to: LNSPLCTVPPVS*PTCKCEFVYTQ Trigger: CTGTGTGTATACAAACTCGCACTTGCAGGTTGGCAAGGAGACTGGTGGCACTGTGCACAACGGTGAGTTCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098458.4 |
||
| CDS-3UTR CCA 90 bp | TTTACTTCAGATGGGGTTTCACCGTGTCGTCTAGGCTGTGATTTTCTCTCCCGCGACCTCCATCCTGGGTaGGGTGAGGACAGTTGCATT | + |
|
Preference number: 4 (lower is better) Translates to: FTSDGVSPCRLGCDFLSRDLHPG*GEDSCI Trigger: AATGCAACTGTCCTCACCCCACCCAGGATGGAGGTC...GCGGGAGAGAAAATCACAGCCTAGACGACACGGTGAAACCCCATCTGAAGTAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098458.4 |
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| CDS-3UTR CCA 90 bp | CCTCGGGTTTCCTCTTGTAAAGAGGGAAGTCCAAACCAACAGTGGTCTGAGTTTGAATACCGGAGCAGCTaGCCCATCTTCCAGACGGAG | + |
|
Preference number: 4 (lower is better) Translates to: PRVSSCKEGSPNQQWSEFEYRSS*PIFQTE Trigger: CTCCGTCTGGAAGATGGGCCAGCTGCTCCGGTATTC...AAACTCAGACCACTGTTGGTTTGGACTTCCCTCTTTACAAGAGGAAACCCGAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098458.4 |
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| CDS-3UTR GCA 90 bp | GTGCACAGTGCCACCAGTCTCCTTGCCAACCTGCAAGTGCGAGTTTGTATACACAGCTCAATAACCAGATaGAGCCCATGTTCAGTGACC | + |
|
Preference number: 4 (lower is better) Translates to: VHSATSLLANLQVRVCIHSSITR*SPCSVT Trigger: GGTCACTGAACATGGGCTGCATCTGGTTATTGAGCT...GTGTATACAAACTCGCACTTGCAGGTTGGCAAGGAGACTGGTGGCACTGTGCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098458.4 |
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| CDS-3UTR TCA 90 bp | ACACCCCTACATATCTCTCCTGGAGTCCCCAAAGTAGAGATGAGGCCGTTGGCATGTAGAAAAACCACATaGACGGACTTGTCCAGACTC | + |
|
Preference number: 4 (lower is better) Translates to: TPLHISPGVPKVEMRPLACRKTT*TDLSRL Trigger: GAGTCTGGACAAGTCCGTTCATGTGGTTTTTCTACA...TGCCAACGGCCTCATCTCTACTTTGGGGACTCCAGGAGAGATATGTAGGGGTGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000098458.4 |
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| CDS-3UTR TCA 90 bp | ACCTGGTTGAAACCGTTACACTGTCTCTACCCTTGTCTGGCTGGTGAAGCCCAGCAGCTGATCAGCTTCTaGGACGAACTGGTTATTTTC | + |
|
Preference number: 4 (lower is better) Translates to: TWLKPLHCLYPCLAGEAQQLISF*DELVIF Trigger: GAAAATAACCAGTTCGTCTCAGAAGCTGATCAGCTG...CTGGGCTTCACCAGCCAGACAAGGGTAGAGACAGTGTAACGGTTTCAACCAGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098458.4 |
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| CDS-3UTR GCA 90 bp | CCTCGGGTTTCCTCTTGTAAAGAGGGAAGTCCAAACCAACAGTGGTCTGAGTTTGATGGCTTTCACCAGTaGCTGCGCCTTCACACAGTA | + |
|
Preference number: 4 (lower is better) Translates to: PRVSSCKEGSPNQQWSEFDGFHQ*LRLHTV Trigger: TACTGTGTGAAGGCGCAGGCACTGGTGAAAGCCATC...AAACTCAGACCACTGTTGGTTTGGACTTCCCTCTTTACAAGAGGAAACCCGAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098458.4 |
||
| CDS-3UTR CCA 90 bp | CCTCCTCGGGTTTCCTCTTGTAAAGAGGGAAGTCCAAACCAACAGTGGTCTGAGGACCCTGAAGTTATATaGCACTGTGGCGGTTATGTC | + |
|
Preference number: 4 (lower is better) Translates to: PPRVSSCKEGSPNQQWSEDPEVI*HCGGYV Trigger: GACATAACCGCCACAGTGCCATATAACTTCAGGGTC...CTCAGACCACTGTTGGTTTGGACTTCCCTCTTTACAAGAGGAAACCCGAGGAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098458.4 |
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| 3UTR CAA 72 bp | TGCCACCAGTCTCCTTGCCAACCTGCAAGTGCGAGTTaGTATACACACAGAGATGAGGGGAGAAACCATTTA | + |
|
Preference number: 4 (lower is better) Translates to: CHQSPCQPASAS*YTHRDEGRNHL Trigger: TAAATGGTTTCTCCCCTCATCTCTGTGTGTATACAAACTCGCACTTGCAGGTTGGCAAGGAGACTGGTGGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098458.4 |
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| CDS-3UTR TCA 90 bp | CCTCGGGTTTCCTCTTGTAAAGAGGGAAGTCCAAACCAACAGTGGTCTGAGTTTATCCGTGAGAAAACCTaGGGTCATGCTGTAGAAAAA | + |
|
Preference number: 4 (lower is better) Translates to: PRVSSCKEGSPNQQWSEFIREKT*GHAVEK Trigger: TTTTTCTACAGCATGACCTCAGGTTTTCTCACGGAT...AAACTCAGACCACTGTTGGTTTGGACTTCCCTCTTTACAAGAGGAAACCCGAGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098458.4 |
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| CDS-3UTR GCA 90 bp | CCTTGCCAACCTGCAAGTGCGAGTTTGTATACACACAGAGATGAGGGGAGAAACTTCCACATCAAGAGATaGTTCATGTTGGTTGACTGT | + |
|
Preference number: 4 (lower is better) Translates to: PCQPASASLYTHRDEGRNFHIKR*FMLVDC Trigger: ACAGTCAACCAACATGAAGCATCTCTTGATGTGGAA...GTTTCTCCCCTCATCTCTGTGTGTATACAAACTCGCACTTGCAGGTTGGCAAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098458.4 |
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| 3UTR CAA 72 bp | GAGGGAAGTCCAAACCAACAGTGGTCTGAGTTTGATTaGACAAAAGGAGGTTTATTACTCTTGGTTGTTCGG | + |
|
Preference number: 4 (lower is better) Translates to: EGSPNQQWSEFD*TKGGLLLLVVR Trigger: CCGAACAACCAAGAGTAATAAACCTCCTTTTGTCAAATCAAACTCAGACCACTGTTGGTTTGGACTTCCCTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098458.4 |
||
| 3UTR CAA 72 bp | TCTGAGTTTGATTTGACAAAAGGAGGTTTATTACTCTaGGTTGTTCGGTTGTTTACTTCAGATGGGGTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: SEFDLTKGGLLL*VVRLFTSDGVS Trigger: TGAAACCCCATCTGAAGTAAACAACCGAACAACCAAGAGTAATAAACCTCCTTTTGTCAAATCAAACTCAGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098458.4 |
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| CDS GCA 90 bp | GGCTGGCTGAAGGCACTGTGCCTCCCGATGGCTTTCACCAGTGCCTaGGCCTTCACACAGTACATGGCCCCCGGTTCCATGGTTTCTAGG | + |
|
Preference number: 5 (lower is better) Translates to: GWLKALCLPMAFTSA*AFTQYMAPGSMVSR Trigger: CCTAGAAACCATGGAACCGGGGGCCATGTACTGTGTGAAGGCGCAGGCACTGGTGAAAGCCATCGGGAGGCACAGTGCCTTCAGCCAGCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000098458.4 |
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| CDS GCA 90 bp | CGTAGGCTGGCTGAAGGCACTGTGCCTCCCGATGGCTTTCACCAGTaGCTGCGCCTTCACACAGTACATGGCCCCCGGTTCCATGGTTTC | + |
|
Preference number: 5 (lower is better) Translates to: RRLAEGTVPPDGFHQ*LRLHTVHGPRFHGF Trigger: GAAACCATGGAACCGGGGGCCATGTACTGTGTGAAGGCGCAGGCACTGGTGAAAGCCATCGGGAGGCACAGTGCCTTCAGCCAGCCTACG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000098458.4 |
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| CDS GCA 90 bp | TCCATCCTGGGTGGGGTGAGGACAGTTGCATTTCGGTTAAAGGGGTaGTCCAGGTTGCTCCAGGCTGAAGTCTGTGAGCCCAGCATGGCC | + |
|
Preference number: 5 (lower is better) Translates to: SILGGVRTVAFRLKG*SRLLQAEVCEPSMA Trigger: GGCCATGCTGGGCTCACAGACTTCAGCCTGGAGCAACCTGGAGCACCCCTTTAACCGAAATGCAACTGTCCTCACCCCACCCAGGATGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098458.4 |
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| CDS CCA 90 bp | GTGTCTGGGAGGACAACGGCGGGGCAGCAAGAATACCGGAGCAGCTaGCCCATCTTCCAGACGGAGAGTAGTACAACCACGAGAATCAGC | + |
|
Preference number: 5 (lower is better) Translates to: VSGRTTAGQQEYRSS*PIFQTESSTTTRIS Trigger: GCTGATTCTCGTGGTTGTACTACTCTCCGTCTGGAAGATGGGCCAGCTGCTCCGGTATTCTTGCTGCCCCGCCGTTGTCCTCCCAGACAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098458.4 |
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| CDS GCA 90 bp | TGCGCCTTCACACAGTACATGGCCCCCGGTTCCATGGTTTCTAGGTaGACCGGAATGTCCCCACTCCTCACCATCTTAACATGTTCCGCG | + |
|
Preference number: 5 (lower is better) Translates to: CAFTQYMAPGSMVSR*TGMSPLLTILTCSA Trigger: CGCGGAACATGTTAAGATGGTGAGGAGTGGGGACATTCCGGTGCACCTAGAAACCATGGAACCGGGGGCCATGTACTGTGTGAAGGCGCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000098458.4 |
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| CDS CCA 90 bp | GCAGCTGATCAGCTTCTGAGACGAACTGGTTATTTTCAAGGTGTCTaGGAGGACAACGGCGGGGCAGCAAGAATACCGGAGCAGCTGGCC | + |
|
Preference number: 5 (lower is better) Translates to: AADQLLRRTGYFQGV*EDNGGAARIPEQLA Trigger: GGCCAGCTGCTCCGGTATTCTTGCTGCCCCGCCGTTGTCCTCCCAGACACCTTGAAAATAACCAGTTCGTCTCAGAAGCTGATCAGCTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098458.4 |
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| CDS-3UTR CAA 90 bp | CCTCCACCCCTCCCTCGCTGCCTGGAGGTAGTGATGGTTATGCCTCTAGTCAGGAAGAGATGCTTCATGTaGGTTGACTGTACAGAGAGG | + |
|
Preference number: 5 (lower is better) Translates to: PPPLPRCLEVVMVMPLVRKRCFM*VDCTER Trigger: CCTCTCTGTACAGTCAACCAACATGAAGCATCTCTT...CCTGACTAGAGGCATAACCATCACTACCTCCAGGCAGCGAGGGAGGGGTGGAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098458.4 |
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| CDS TCA 90 bp | GGCGGTTATGTCATCGGTGACATCACACTCCAGACTTTTGGTCGGTaGGCATTGACTGCTGGGGATCCAGATGTGGCTCATGTACAGGCT | + |
|
Preference number: 5 (lower is better) Translates to: GGYVIGDITLQTFGR*ALTAGDPDVAHVQA Trigger: AGCCTGTACATGAGCCACATCTGGATCCCCAGCAGTCAATGCTCACCGACCAAAAGTCTGGAGTGTGATGTCACCGATGACATAACCGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098458.4 |
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| CDS CCA 90 bp | CTCAATAACCAGATGCAGCCCATGTTCAGTGACCTCCATCCTGGGTaGGGTGAGGACAGTTGCATTTCGGTTAAAGGGGTGCTCCAGGTT | + |
|
Preference number: 5 (lower is better) Translates to: LNNQMQPMFSDLHPG*GEDSCISVKGVLQV Trigger: AACCTGGAGCACCCCTTTAACCGAAATGCAACTGTCCTCACCCCACCCAGGATGGAGGTCACTGAACATGGGCTGCATCTGGTTATTGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098458.4 |
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| CDS TCA 90 bp | ATGTCATCGGTGACATCACACTCCAGACTTTTGGTCGGTGAGCATTaGCTGCTGGGGATCCAGATGTGGCTCATGTACAGGCTCTCGTAC | + |
|
Preference number: 5 (lower is better) Translates to: MSSVTSHSRLLVGEH*LLGIQMWLMYRLSY Trigger: GTACGAGAGCCTGTACATGAGCCACATCTGGATCCCCAGCAGTCAATGCTCACCGACCAAAAGTCTGGAGTGTGATGTCACCGATGACAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098458.4 |
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| CDS TCA 90 bp | GGCCCATCTTCCAGACGGAGAGTAGTACAACCACGAGAATCAGCATaGAGCCAACAAACGCAAACAGAGCTAGTGCCAGCGGAAGAGACT | + |
|
Preference number: 5 (lower is better) Translates to: GPSSRRRVVQPRESA*SQQTQTELVPAEET Trigger: AGTCTCTTCCGCTGGCACTAGCTCTGTTTGCGTTTGTTGGCTTCATGCTGATTCTCGTGGTTGTACTACTCTCCGTCTGGAAGATGGGCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098458.4 |
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| CDS-3UTR CAA 90 bp | CCTCGGGTTTCCTCTTGTAAAGAGGGAAGTCCAAACCAACAGTGGTCTGAGTTTAAGGGGTGCTCCAGGTaGCTCCAGGCTGAAGTCTGT | + |
|
Preference number: 5 (lower is better) Translates to: PRVSSCKEGSPNQQWSEFKGCSR*LQAEVC Trigger: ACAGACTTCAGCCTGGAGCAACCTGGAGCACCCCTT...AAACTCAGACCACTGTTGGTTTGGACTTCCCTCTTTACAAGAGGAAACCCGAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098458.4 |
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| CDS-3UTR CAA 90 bp | CCTTGCCAACCTGCAAGTGCGAGTTTGTATACACACAGAGATGAGGGGAGAAACGATGCTTCATGTTGGTaGACTGTACAGAGAGGTTCT | + |
|
Preference number: 5 (lower is better) Translates to: PCQPASASLYTHRDEGRNDASCW*TVQRGS Trigger: AGAACCTCTCTGTACAGTCAACCAACATGAAGCATC...GTTTCTCCCCTCATCTCTGTGTGTATACAAACTCGCACTTGCAGGTTGGCAAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098458.4 |
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| CDS GCA 72 bp | GCTGAAGGCACTGTGCCTCCCGATGGCTTTCACCAGTaGCTGCGCCTTCACACAGTACATGGCCCCCGGTTC | + |
|
Preference number: 6 (lower is better) Translates to: AEGTVPPDGFHQ*LRLHTVHGPRF Trigger: GAACCGGGGGCCATGTACTGTGTGAAGGCGCAGGCACTGGTGAAAGCCATCGGGAGGCACAGTGCCTTCAGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000098458.4 |
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| CDS CAA 90 bp | GGTGGGGTGAGGACAGTTGCATTTCGGTTAAAGGGGTGCTCCAGGTaGCTCCAGGCTGAAGTCTGTGAGCCCAGCATGGCCTTGACCCTG | + |
|
Preference number: 6 (lower is better) Translates to: GGVRTVAFRLKGCSR*LQAEVCEPSMALTL Trigger: CAGGGTCAAGGCCATGCTGGGCTCACAGACTTCAGCCTGGAGCAACCTGGAGCACCCCTTTAACCGAAATGCAACTGTCCTCACCCCACC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098458.4 |
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| CDS GCA 72 bp | GGTGGGGTGAGGACAGTTGCATTTCGGTTAAAGGGGTaGTCCAGGTTGCTCCAGGCTGAAGTCTGTGAGCCC | + |
|
Preference number: 6 (lower is better) Translates to: GGVRTVAFRLKG*SRLLQAEVCEP Trigger: GGGCTCACAGACTTCAGCCTGGAGCAACCTGGAGCACCCCTTTAACCGAAATGCAACTGTCCTCACCCCACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098458.4 |
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| CDS CCA 72 bp | TGGCTTTCACCAGTGCCTGCGCCTTCACACAGTACATaGCCCCCGGTTCCATGGTTTCTAGGTGCACCGGAA | + |
|
Preference number: 6 (lower is better) Translates to: WLSPVPAPSHST*PPVPWFLGAPE Trigger: TTCCGGTGCACCTAGAAACCATGGAACCGGGGGCCATGTACTGTGTGAAGGCGCAGGCACTGGTGAAAGCCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000098458.4 |
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| CDS GCA 72 bp | GCAAACAGAGCTAGTGCCAGCGGAAGAGACTCTCCTTaGATCTCCACACACGTAGGCTGGCTGAAGGCACTG | + |
|
Preference number: 6 (lower is better) Translates to: ANRASASGRDSP*ISTHVGWLKAL Trigger: CAGTGCCTTCAGCCAGCCTACGTGTGTGGAGATGCAAGGAGAGTCTCTTCCGCTGGCACTAGCTCTGTTTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098458.4 |
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| CDS CAA 72 bp | AGGACAGTTGCATTTCGGTTAAAGGGGTGCTCCAGGTaGCTCCAGGCTGAAGTCTGTGAGCCCAGCATGGCC | + |
|
Preference number: 6 (lower is better) Translates to: RTVAFRLKGCSR*LQAEVCEPSMA Trigger: GGCCATGCTGGGCTCACAGACTTCAGCCTGGAGCAACCTGGAGCACCCCTTTAACCGAAATGCAACTGTCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098458.4 |
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| CDS CAA 90 bp | TGCTCCAGGTTGCTCCAGGCTGAAGTCTGTGAGCCCAGCATGGCCTaGACCCTGAAGTTATATGGCACTGTGGCGGTTATGTCATCGGTG | + |
|
Preference number: 6 (lower is better) Translates to: CSRLLQAEVCEPSMA*TLKLYGTVAVMSSV Trigger: CACCGATGACATAACCGCCACAGTGCCATATAACTTCAGGGTCAAGGCCATGCTGGGCTCACAGACTTCAGCCTGGAGCAACCTGGAGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098458.4 |
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| CDS GCA 72 bp | TTCAGTGACCTCCATCCTGGGTGGGGTGAGGACAGTTaGATTTCGGTTAAAGGGGTGCTCCAGGTTGCTCCA | + |
|
Preference number: 6 (lower is better) Translates to: FSDLHPGWGEDS*ISVKGVLQVAP Trigger: TGGAGCAACCTGGAGCACCCCTTTAACCGAAATGCAACTGTCCTCACCCCACCCAGGATGGAGGTCACTGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098458.4 |
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| CDS CCA 72 bp | CAGATGCAGCCCATGTTCAGTGACCTCCATCCTGGGTaGGGTGAGGACAGTTGCATTTCGGTTAAAGGGGTG | + |
|
Preference number: 6 (lower is better) Translates to: QMQPMFSDLHPG*GEDSCISVKGV Trigger: CACCCCTTTAACCGAAATGCAACTGTCCTCACCCCACCCAGGATGGAGGTCACTGAACATGGGCTGCATCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098458.4 |
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| CDS GCA 72 bp | ACACAGTACATGGCCCCCGGTTCCATGGTTTCTAGGTaGACCGGAATGTCCCCACTCCTCACCATCTTAACA | + |
|
Preference number: 6 (lower is better) Translates to: TQYMAPGSMVSR*TGMSPLLTILT Trigger: TGTTAAGATGGTGAGGAGTGGGGACATTCCGGTGCACCTAGAAACCATGGAACCGGGGGCCATGTACTGTGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000098458.4 |
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| CDS CCA 72 bp | CACACTCCAGACTTTTGGTCGGTGAGCATTGACTGCTaGGGATCCAGATGTGGCTCATGTACAGGCTCTCGT | + |
|
Preference number: 6 (lower is better) Translates to: HTPDFWSVSIDC*GSRCGSCTGSR Trigger: ACGAGAGCCTGTACATGAGCCACATCTGGATCCCCAGCAGTCAATGCTCACCGACCAAAAGTCTGGAGTGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098458.4 |
||
| CDS CAA 72 bp | TTGCTCCAGGCTGAAGTCTGTGAGCCCAGCATGGCCTaGACCCTGAAGTTATATGGCACTGTGGCGGTTATG | + |
|
Preference number: 6 (lower is better) Translates to: LLQAEVCEPSMA*TLKLYGTVAVM Trigger: CATAACCGCCACAGTGCCATATAACTTCAGGGTCAAGGCCATGCTGGGCTCACAGACTTCAGCCTGGAGCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098458.4 |
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| CDS CAA 90 bp | CCGGCTGGGTCACTGGGTTCCACATCAAGAGATGCTTCATGTTGGTaGACTGTACAGAGAGGTTCTGAGGGGCAGGTAAAACGGACACTG | + |
|
Preference number: 6 (lower is better) Translates to: PAGSLGSTSRDASCW*TVQRGSEGQVKRTL Trigger: CAGTGTCCGTTTTACCTGCCCCTCAGAACCTCTCTGTACAGTCAACCAACATGAAGCATCTCTTGATGTGGAACCCAGTGACCCAGCCGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098458.4 |
||
| CDS TCA 72 bp | GTGACATCACACTCCAGACTTTTGGTCGGTGAGCATTaGCTGCTGGGGATCCAGATGTGGCTCATGTACAGG | + |
|
Preference number: 6 (lower is better) Translates to: VTSHSRLLVGEH*LLGIQMWLMYR Trigger: CCTGTACATGAGCCACATCTGGATCCCCAGCAGTCAATGCTCACCGACCAAAAGTCTGGAGTGTGATGTCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098458.4 |
||
| CDS TCA 72 bp | GTCATCGGTGACATCACACTCCAGACTTTTGGTCGGTaGGCATTGACTGCTGGGGATCCAGATGTGGCTCAT | + |
|
Preference number: 6 (lower is better) Translates to: VIGDITLQTFGR*ALTAGDPDVAH Trigger: ATGAGCCACATCTGGATCCCCAGCAGTCAATGCTCACCGACCAAAAGTCTGGAGTGTGATGTCACCGATGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098458.4 |
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| CDS TCA 72 bp | TCCAGACGGAGAGTAGTACAACCACGAGAATCAGCATaGAGCCAACAAACGCAAACAGAGCTAGTGCCAGCG | + |
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Preference number: 6 (lower is better) Translates to: SRRRVVQPRESA*SQQTQTELVPA Trigger: CGCTGGCACTAGCTCTGTTTGCGTTTGTTGGCTTCATGCTGATTCTCGTGGTTGTACTACTCTCCGTCTGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098458.4 |
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| CDS CCA 72 bp | GGGTCACTGGGTTCCACATCAAGAGATGCTTCATGTTaGTTGACTGTACAGAGAGGTTCTGAGGGGCAGGTA | + |
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Preference number: 6 (lower is better) Translates to: GSLGSTSRDASC*LTVQRGSEGQV Trigger: TACCTGCCCCTCAGAACCTCTCTGTACAGTCAACCAACATGAAGCATCTCTTGATGTGGAACCCAGTGACCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098458.4 |
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| CDS TCA 72 bp | AGATGCTTCATGTTGGTTGACTGTACAGAGAGGTTCTaGGGGGCAGGTAAAACGGACACTGCATCCGTGAGA | + |
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Preference number: 6 (lower is better) Translates to: RCFMLVDCTERF*GAGKTDTASVR Trigger: TCTCACGGATGCAGTGTCCGTTTTACCTGCCCCTCAGAACCTCTCTGTACAGTCAACCAACATGAAGCATCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000098458.4 |
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| CDS CAA 72 bp | TCACTGGGTTCCACATCAAGAGATGCTTCATGTTGGTaGACTGTACAGAGAGGTTCTGAGGGGCAGGTAAAA | + |
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Preference number: 6 (lower is better) Translates to: SLGSTSRDASCW*TVQRGSEGQVK Trigger: TTTTACCTGCCCCTCAGAACCTCTCTGTACAGTCAACCAACATGAAGCATCTCTTGATGTGGAACCCAGTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098458.4 |
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