Pregenerated sensors for IL20RA (Mus musculus)
Ensembl gene IDs: ENSMUSG00000020007Ensembl transcript IDs: ENSMUST00000020185.5, ENSMUST00000217389.2
Found 117 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | ACTGATGCACTGCTTCTGAGAAGGCATCGGGAGGCGAGGGGGCCCTaGGACAAGGGACTCCACGTGGACACAATACAGAGTGTTGGGCTC | + |
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Preference number: 1 (lower is better) Translates to: TDALLLRRHREARGP*DKGLHVDTIQSVGL Trigger: GAGCCCAACACTCTGTATTGTGTCCACGTGGAGTCCCTTGTCCCAGGGCCCCCTCGCCTCCCGATGCCTTCTCAGAAGCAGTGCATCAGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000217389.2 |
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| 3UTR TCA 90 bp | CTTCTCGCCAGTTGTCAGGGCAACCTCTGGTGGGCTGACTTGAGCTaGGGGCATAGGTCACCAGCCTCTGATCTGGCAGAGCACTGGGAA | + |
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Preference number: 1 (lower is better) Translates to: LLASCQGNLWWADLS*GHRSPASDLAEHWE Trigger: TTCCCAGTGCTCTGCCAGATCAGAGGCTGGTGACCTATGCCCTCAGCTCAAGTCAGCCCACCAGAGGTTGCCCTGACAACTGGCGAGAAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217389.2 |
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| 3UTR CCA 90 bp | CAACACCTCCCGGGGCCTCTGCAGCCCTTAAGCATTTCATTATGGTaGCCCTGCCAGCATCCTTCATGGTTGGGTCAGTCACATATCAGG | + |
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Preference number: 1 (lower is better) Translates to: QHLPGPLQPLSISLW*PCQHPSWLGQSHIR Trigger: CCTGATATGTGACTGACCCAACCATGAAGGATGCTGGCAGGGCCACCATAATGAAATGCTTAAGGGCTGCAGAGGCCCCGGGAGGTGTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217389.2 |
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| 3UTR CCA 90 bp | AGTCAACACCTCCCGGGGCCTCTGCAGCCCTTAAGCATTTCATTATaGTGGCCCTGCCAGCATCCTTCATGGTTGGGTCAGTCACATATC | + |
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Preference number: 1 (lower is better) Translates to: SQHLPGPLQPLSISL*WPCQHPSWLGQSHI Trigger: GATATGTGACTGACCCAACCATGAAGGATGCTGGCAGGGCCACCATAATGAAATGCTTAAGGGCTGCAGAGGCCCCGGGAGGTGTTGACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217389.2 |
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| 3UTR CCA 90 bp | AGAAGCGTTCCGTCTCGGCCCATTCGGAGCACCTGGCTTCCCAAATaGCCTTCACTTTGGCATAGAACTGGTGTTCATAGTCTGAGGTCT | + |
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Preference number: 1 (lower is better) Translates to: RSVPSRPIRSTWLPK*PSLWHRTGVHSLRS Trigger: AGACCTCAGACTATGAACACCAGTTCTATGCCAAAGTGAAGGCCATTTGGGAAGCCAGGTGCTCCGAATGGGCCGAGACGGAACGCTTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217389.2 |
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| 3UTR CCA 90 bp | CCAAGAAAGGATAGAAGCGTTCCGTCTCGGCCCATTCGGAGCACCTaGCTTCCCAAATGGCCTTCACTTTGGCATAGAACTGGTGTTCAT | + |
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Preference number: 1 (lower is better) Translates to: PRKDRSVPSRPIRST*LPKWPSLWHRTGVH Trigger: ATGAACACCAGTTCTATGCCAAAGTGAAGGCCATTTGGGAAGCCAGGTGCTCCGAATGGGCCGAGACGGAACGCTTCTATCCTTTCTTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217389.2 |
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| 3UTR CCA 90 bp | TTGGGCTCCAGCCAGCTGAGGACCAGTGTGCTGTTGGTGACACACTaGGACCACGTTCTTCTCGACTTAGTGTTATACACAGACACATTG | + |
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Preference number: 1 (lower is better) Translates to: LGSSQLRTSVLLVTH*DHVLLDLVLYTDTL Trigger: CAATGTGTCTGTGTATAACACTAAGTCGAGAAGAACGTGGTCCCAGTGTGTCACCAACAGCACACTGGTCCTCAGCTGGCTGGAGCCCAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217389.2 |
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| 3UTR CCA 90 bp | TCTCGGCCCATTCGGAGCACCTGGCTTCCCAAATGGCCTTCACTTTaGCATAGAACTGGTGTTCATAGTCTGAGGTCTCAACAGAAAGGT | + |
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Preference number: 1 (lower is better) Translates to: SRPIRSTWLPKWPSL*HRTGVHSLRSQQKG Trigger: ACCTTTCTGTTGAGACCTCAGACTATGAACACCAGTTCTATGCCAAAGTGAAGGCCATTTGGGAAGCCAGGTGCTCCGAATGGGCCGAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217389.2 |
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| 3UTR CCA 90 bp | TTTCAGAAAGTTCCTCTAGGACTCTCTGTGGATTGGGAAGAAGGTTaGATGGAAGCCAATCACATGGATGAGGCAGGGCTGACAAAGTTC | + |
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Preference number: 1 (lower is better) Translates to: FQKVPLGLSVDWEEG*MEANHMDEAGLTKF Trigger: GAACTTTGTCAGCCCTGCCTCATCCATGTGATTGGCTTCCATCCAACCTTCTTCCCAATCCACAGAGAGTCCTAGAGGAACTTTCTGAAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020185.5 |
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| 3UTR TCA 90 bp | TTCCCAAATGGCCTTCACTTTGGCATAGAACTGGTGTTCATAGTCTaGGGTCTCAACAGAAAGGTCACAGTAGGTCCTGTTGATACTCCC | + |
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Preference number: 1 (lower is better) Translates to: FPNGLHFGIELVFIV*GLNRKVTVGPVDTP Trigger: GGGAGTATCAACAGGACCTACTGTGACCTTTCTGTTGAGACCTCAGACTATGAACACCAGTTCTATGCCAAAGTGAAGGCCATTTGGGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217389.2 |
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| 3UTR GCA 90 bp | CCCAACCTGCAAATCTTACTCTGTCTACAACAAAGCTCAGGGCTCTaGATTTCAGAAAGTTCCTCTAGGACTCTCTGTGGATTGGGAAGA | + |
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Preference number: 1 (lower is better) Translates to: PNLQILLCLQQSSGL*ISESSSRTLCGLGR Trigger: TCTTCCCAATCCACAGAGAGTCCTAGAGGAACTTTCTGAAATGCAGAGCCCTGAGCTTTGTTGTAGACAGAGTAAGATTTGCAGGTTGGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020185.5 |
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| 3UTR CCA 90 bp | CTTCAAATTGGGGTATATCTGTTGCATAGAAACAGTGTGGTCTTGTaGATTTCTTTTCCACTTCTCTGGTGCTGTCAGGGCAATAGAGAT | + |
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Preference number: 1 (lower is better) Translates to: LQIGVYLLHRNSVVL*ISFPLLWCCQGNRD Trigger: ATCTCTATTGCCCTGACAGCACCAGAGAAGTGGAAAAGAAATCCACAAGACCACACTGTTTCTATGCAACAGATATACCCCAATTTGAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000217389.2 |
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| 3UTR CCA 90 bp | ACATTGTACTTCAAATTGGGGTATATCTGTTGCATAGAAACAGTGTaGTCTTGTGGATTTCTTTTCCACTTCTCTGGTGCTGTCAGGGCA | + |
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Preference number: 1 (lower is better) Translates to: TLYFKLGYICCIETV*SCGFLFHFSGAVRA Trigger: TGCCCTGACAGCACCAGAGAAGTGGAAAAGAAATCCACAAGACCACACTGTTTCTATGCAACAGATATACCCCAATTTGAAGTACAATGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000217389.2 |
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| 3UTR CAA 90 bp | GGGGGCCCTGGGACAAGGGACTCCACGTGGACACAATACAGAGTGTaGGGCTCCAGCCAGCTGAGGACCAGTGTGCTGTTGGTGACACAC | + |
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Preference number: 2 (lower is better) Translates to: GGPGTRDSTWTQYRV*GSSQLRTSVLLVTH Trigger: GTGTGTCACCAACAGCACACTGGTCCTCAGCTGGCTGGAGCCCAACACTCTGTATTGTGTCCACGTGGAGTCCCTTGTCCCAGGGCCCCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000217389.2 |
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| 3UTR-3UTR CCA 90 bp | AACTTCCAAAGTACTGATGCACTGCTTCTGAGAAGGCATCGGGAGGCGAGGGGGCCCATTCGGAGCACCTaGCTTCCCAAATGGCCTTCA | + |
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Preference number: 2 (lower is better) Translates to: NFQSTDALLLRRHREARGPIRST*LPKWPS Trigger: TGAAGGCCATTTGGGAAGCCAGGTGCTCCGAATGGG...CCCCCTCGCCTCCCGATGCCTTCTCAGAAGCAGTGCATCAGTACTTTGGAAGTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000217389.2 |
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| 3UTR CAA 90 bp | CAATACAGAGTGTTGGGCTCCAGCCAGCTGAGGACCAGTGTGCTGTaGGTGACACACTGGGACCACGTTCTTCTCGACTTAGTGTTATAC | + |
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Preference number: 2 (lower is better) Translates to: QYRVLGSSQLRTSVL*VTHWDHVLLDLVLY Trigger: GTATAACACTAAGTCGAGAAGAACGTGGTCCCAGTGTGTCACCAACAGCACACTGGTCCTCAGCTGGCTGGAGCCCAACACTCTGTATTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217389.2 |
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| 3UTR-3UTR CCA 90 bp | AACTTCCAAAGTACTGATGCACTGCTTCTGAGAAGGCATCGGGAGGCGAGGGGGAGCATCCTTCATGGTTaGGTCAGTCACATATCAGGG | + |
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Preference number: 2 (lower is better) Translates to: NFQSTDALLLRRHREARGSILHG*VSHISG Trigger: CCCTGATATGTGACTGACCCAACCATGAAGGATGCT...CCCCCTCGCCTCCCGATGCCTTCTCAGAAGCAGTGCATCAGTACTTTGGAAGTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000217389.2 |
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| 3UTR-3UTR GCA 90 bp | AACTTCCAAAGTACTGATGCACTGCTTCTGAGAAGGCATCGGGAGGCGAGGGGGTTCAGCCATTTCTTCTaGCCATATCGTGCTTTGAAT | + |
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Preference number: 2 (lower is better) Translates to: NFQSTDALLLRRHREARGFSHFF*PYRALN Trigger: ATTCAAAGCACGATATGGGCAGAAGAAATGGCTGAA...CCCCCTCGCCTCCCGATGCCTTCTCAGAAGCAGTGCATCAGTACTTTGGAAGTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000217389.2 |
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| 3UTR-3UTR CCA 90 bp | GTTCCTCTAGGACTCTCTGTGGATTGGGAAGAAGGTTGGATGGAAGCCAATCACACACTGTTCACCCCCTaGGATGGTTCCTTCATTTGT | + |
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Preference number: 2 (lower is better) Translates to: VPLGLSVDWEEGWMEANHTLFTP*DGSFIC Trigger: ACAAATGAAGGAACCATCCCAGGGGGTGAACAGTGT...GTGATTGGCTTCCATCCAACCTTCTTCCCAATCCACAGAGAGTCCTAGAGGAAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020185.5 |
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| 3UTR-3UTR CCA 90 bp | AACAAAGCTCAGGGCTCTGCATTTCAGAAAGTTCCTCTAGGACTCTCTGTGGATGGTTCCTTCATTTGTTaGCAGTCAACAGAAAGCCTG | + |
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Preference number: 2 (lower is better) Translates to: NKAQGSAFQKVPLGLSVDGSFIC*QSTESL Trigger: CAGGCTTTCTGTTGACTGCCAACAAATGAAGGAACC...ATCCACAGAGAGTCCTAGAGGAACTTTCTGAAATGCAGAGCCCTGAGCTTTGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020185.5 |
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| 3UTR-3UTR CCA 90 bp | GAGCTCTTCTGTATAAAGTCCCCACCCAACCTGCAAATCTTACTCTGTCTACAAGGGAAGAAGGTTGGATaGAAGCCAATCACATGGATG | + |
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Preference number: 2 (lower is better) Translates to: ELFCIKSPPNLQILLCLQGKKVG*KPITWM Trigger: CATCCATGTGATTGGCTTCCATCCAACCTTCTTCCC...TTGTAGACAGAGTAAGATTTGCAGGTTGGGTGGGGACTTTATACAGAAGAGCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020185.5 |
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| 3UTR CAA 90 bp | CACTGGGACCACGTTCTTCTCGACTTAGTGTTATACACAGACACATaGTACTTCAAATTGGGGTATATCTGTTGCATAGAAACAGTGTGG | + |
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Preference number: 2 (lower is better) Translates to: HWDHVLLDLVLYTDT*YFKLGYICCIETVW Trigger: CCACACTGTTTCTATGCAACAGATATACCCCAATTTGAAGTACAATGTGTCTGTGTATAACACTAAGTCGAGAAGAACGTGGTCCCAGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217389.2 |
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| 3UTR-3UTR CCA 90 bp | TCTTGTCTTAATTCTGAGTTACATTTTCCAAGAAAGGATAGAAGCGTTCCGTCTACCTGGCTTCCCAAATaGCCTTCACTTTGGCATAGA | + |
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Preference number: 2 (lower is better) Translates to: SCLNSELHFPRKDRSVPSTWLPK*PSLWHR Trigger: TCTATGCCAAAGTGAAGGCCATTTGGGAAGCCAGGT...AGACGGAACGCTTCTATCCTTTCTTGGAAAATGTAACTCAGAATTAAGACAAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217389.2 |
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| 3UTR CCA 72 bp | GGGCATAGGTCACCAGCCTCTGATCTGGCAGAGCACTaGGAAAGTCAACACCTCCCGGGGCCTCTGCAGCCC | + |
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Preference number: 3 (lower is better) Translates to: GHRSPASDLAEH*ESQHLPGPLQP Trigger: GGGCTGCAGAGGCCCCGGGAGGTGTTGACTTTCCCAGTGCTCTGCCAGATCAGAGGCTGGTGACCTATGCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217389.2 |
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| 3UTR TCA 72 bp | TCGCCAGTTGTCAGGGCAACCTCTGGTGGGCTGACTTaGGCTGAGGGCATAGGTCACCAGCCTCTGATCTGG | + |
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Preference number: 3 (lower is better) Translates to: SPVVRATSGGLT*AEGIGHQPLIW Trigger: CCAGATCAGAGGCTGGTGACCTATGCCCTCAGCTCAAGTCAGCCCACCAGAGGTTGCCCTGACAACTGGCGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217389.2 |
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| 3UTR CCA 72 bp | CTCCCGGGGCCTCTGCAGCCCTTAAGCATTTCATTATaGTGGCCCTGCCAGCATCCTTCATGGTTGGGTCAG | + |
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Preference number: 3 (lower is better) Translates to: LPGPLQPLSISL*WPCQHPSWLGQ Trigger: CTGACCCAACCATGAAGGATGCTGGCAGGGCCACCATAATGAAATGCTTAAGGGCTGCAGAGGCCCCGGGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217389.2 |
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| 3UTR CCA 72 bp | GATAGAAGCGTTCCGTCTCGGCCCATTCGGAGCACCTaGCTTCCCAAATGGCCTTCACTTTGGCATAGAACT | + |
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Preference number: 3 (lower is better) Translates to: DRSVPSRPIRST*LPKWPSLWHRT Trigger: AGTTCTATGCCAAAGTGAAGGCCATTTGGGAAGCCAGGTGCTCCGAATGGGCCGAGACGGAACGCTTCTATC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217389.2 |
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| 3UTR CCA 72 bp | GTTCCTCTAGGACTCTCTGTGGATTGGGAAGAAGGTTaGATGGAAGCCAATCACATGGATGAGGCAGGGCTG | + |
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Preference number: 3 (lower is better) Translates to: VPLGLSVDWEEG*MEANHMDEAGL Trigger: CAGCCCTGCCTCATCCATGTGATTGGCTTCCATCCAACCTTCTTCCCAATCCACAGAGAGTCCTAGAGGAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020185.5 |
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| 3UTR CCA 72 bp | ATTCGGAGCACCTGGCTTCCCAAATGGCCTTCACTTTaGCATAGAACTGGTGTTCATAGTCTGAGGTCTCAA | + |
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Preference number: 3 (lower is better) Translates to: IRSTWLPKWPSL*HRTGVHSLRSQ Trigger: TTGAGACCTCAGACTATGAACACCAGTTCTATGCCAAAGTGAAGGCCATTTGGGAAGCCAGGTGCTCCGAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217389.2 |
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| 3UTR CCA 72 bp | AACAGTGTGGTCTTGTGGATTTCTTTTCCACTTCTCTaGTGCTGTCAGGGCAATAGAGATGGACTTCTCGCC | + |
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Preference number: 3 (lower is better) Translates to: NSVVLWISFPLL*CCQGNRDGLLA Trigger: GGCGAGAAGTCCATCTCTATTGCCCTGACAGCACCAGAGAAGTGGAAAAGAAATCCACAAGACCACACTGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217389.2 |
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| 3UTR TCA 72 bp | ACAGAGAGAACAGTCTCATTGCTGACACTGATAACCTaGACACTGTTCACCCCCTGGGATGGTTCCTTCATT | + |
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Preference number: 3 (lower is better) Translates to: TERTVSLLTLIT*TLFTPWDGSFI Trigger: AATGAAGGAACCATCCCAGGGGGTGAACAGTGTTCAGGTTATCAGTGTCAGCAATGAGACTGTTCTCTCTGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020185.5 |
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| 3UTR TCA 72 bp | TTGGGAAGAAGGTTGGATGGAAGCCAATCACATGGATaGGGCAGGGCTGACAAAGTTCATGAACAGAGAGAA | + |
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Preference number: 3 (lower is better) Translates to: LGRRLDGSQSHG*GRADKVHEQRE Trigger: TTCTCTCTGTTCATGAACTTTGTCAGCCCTGCCTCATCCATGTGATTGGCTTCCATCCAACCTTCTTCCCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020185.5 |
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| 3UTR TCA 72 bp | GGCCTTCACTTTGGCATAGAACTGGTGTTCATAGTCTaGGGTCTCAACAGAAAGGTCACAGTAGGTCCTGTT | + |
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Preference number: 3 (lower is better) Translates to: GLHFGIELVFIV*GLNRKVTVGPV Trigger: AACAGGACCTACTGTGACCTTTCTGTTGAGACCTCAGACTATGAACACCAGTTCTATGCCAAAGTGAAGGCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217389.2 |
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| 3UTR-3UTR CAA 90 bp | CTTCTGTATAAAGTCCCCACCCAACCTGCAAATCTTACTCTGTCTACAACAAAGAGGACTCTCTGTGGATaGGGAAGAAGGTTGGATGGA | + |
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Preference number: 3 (lower is better) Translates to: LLYKVPTQPANLTLSTTKRTLCG*GRRLDG Trigger: TCCATCCAACCTTCTTCCCAATCCACAGAGAGTCCT...CTTTGTTGTAGACAGAGTAAGATTTGCAGGTTGGGTGGGGACTTTATACAGAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020185.5 |
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| 3UTR CCA 72 bp | GCATTTCAGAAAGTTCCTCTAGGACTCTCTGTGGATTaGGAAGAAGGTTGGATGGAAGCCAATCACATGGAT | + |
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Preference number: 3 (lower is better) Translates to: AFQKVPLGLSVD*EEGWMEANHMD Trigger: ATCCATGTGATTGGCTTCCATCCAACCTTCTTCCCAATCCACAGAGAGTCCTAGAGGAACTTTCTGAAATGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020185.5 |
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| 3UTR CCA 72 bp | AGCATTTCATTATGGTGGCCCTGCCAGCATCCTTCATaGTTGGGTCAGTCACATATCAGGGAATGGAAAATT | + |
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Preference number: 3 (lower is better) Translates to: SISLWWPCQHPS*LGQSHIREWKI Trigger: AATTTTCCATTCCCTGATATGTGACTGACCCAACCATGAAGGATGCTGGCAGGGCCACCATAATGAAATGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217389.2 |
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| 3UTR-3UTR CAA 90 bp | CTTCTGTATAAAGTCCCCACCCAACCTGCAAATCTTACTCTGTCTACAACAAAGGGATTGGGAAGAAGGTaGGATGGAAGCCAATCACAT | + |
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Preference number: 3 (lower is better) Translates to: LLYKVPTQPANLTLSTTKGLGRR*DGSQSH Trigger: ATGTGATTGGCTTCCATCCAACCTTCTTCCCAATCC...CTTTGTTGTAGACAGAGTAAGATTTGCAGGTTGGGTGGGGACTTTATACAGAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020185.5 |
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| 3UTR GCA 72 bp | CAAATCTTACTCTGTCTACAACAAAGCTCAGGGCTCTaGATTTCAGAAAGTTCCTCTAGGACTCTCTGTGGA | + |
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Preference number: 3 (lower is better) Translates to: QILLCLQQSSGL*ISESSSRTLCG Trigger: TCCACAGAGAGTCCTAGAGGAACTTTCTGAAATGCAGAGCCCTGAGCTTTGTTGTAGACAGAGTAAGATTTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020185.5 |
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| 3UTR CAA 72 bp | GGGACAAGGGACTCCACGTGGACACAATACAGAGTGTaGGGCTCCAGCCAGCTGAGGACCAGTGTGCTGTTG | + |
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Preference number: 4 (lower is better) Translates to: GTRDSTWTQYRV*GSSQLRTSVLL Trigger: CAACAGCACACTGGTCCTCAGCTGGCTGGAGCCCAACACTCTGTATTGTGTCCACGTGGAGTCCCTTGTCCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217389.2 |
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| CDS-3UTR TCA 90 bp | GTTCCTCTAGGACTCTCTGTGGATTGGGAAGAAGGTTGGATGGAAGCCAATCACGCAGCAGAAGCAGCGTaGGCAGCAACAGTGGCGGCG | + |
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Preference number: 4 (lower is better) Translates to: VPLGLSVDWEEGWMEANHAAEAA*AATVAA Trigger: CGCCGCCACTGTTGCTGCTCACGCTGCTTCTGCTGC...GTGATTGGCTTCCATCCAACCTTCTTCCCAATCCACAGAGAGTCCTAGAGGAAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020185.5 |
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| CDS-3UTR CCA 90 bp | GAAAGTTCCTCTAGGACTCTCTGTGGATTGGGAAGAAGGTTGGATGGAAGCCAAGAGGCGAGGGGGCCCTaGGACAAGGGACTCCACGTG | + |
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Preference number: 4 (lower is better) Translates to: ESSSRTLCGLGRRLDGSQEARGP*DKGLHV Trigger: CACGTGGAGTCCCTTGTCCCAGGGCCCCCTCGCCTC...TTGGCTTCCATCCAACCTTCTTCCCAATCCACAGAGAGTCCTAGAGGAACTTTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020185.5 |
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| 3UTR CAA 72 bp | GTGTTGGGCTCCAGCCAGCTGAGGACCAGTGTGCTGTaGGTGACACACTGGGACCACGTTCTTCTCGACTTA | + |
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Preference number: 4 (lower is better) Translates to: VLGSSQLRTSVL*VTHWDHVLLDL Trigger: TAAGTCGAGAAGAACGTGGTCCCAGTGTGTCACCAACAGCACACTGGTCCTCAGCTGGCTGGAGCCCAACAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217389.2 |
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| CDS-3UTR TCA 90 bp | GAAAGTTCCTCTAGGACTCTCTGTGGATTGGGAAGAAGGTTGGATGGAAGCCAATGGGCTCCAGCCAGCTaGGGACCAGTGTGCTGTTGG | + |
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Preference number: 4 (lower is better) Translates to: ESSSRTLCGLGRRLDGSQWAPAS*GPVCCW Trigger: CCAACAGCACACTGGTCCTCAGCTGGCTGGAGCCCA...TTGGCTTCCATCCAACCTTCTTCCCAATCCACAGAGAGTCCTAGAGGAACTTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020185.5 |
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| CDS-3UTR GCA 90 bp | GAAAGTTCCTCTAGGACTCTCTGTGGATTGGGAAGAAGGTTGGATGGAAGCCAATCCACCTCCTCCCAGTaGGGCTCCCAGGCCTCATTG | + |
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Preference number: 4 (lower is better) Translates to: ESSSRTLCGLGRRLDGSQSTSSQ*GSQASL Trigger: CAATGAGGCCTGGGAGCCGCACTGGGAGGAGGTGGA...TTGGCTTCCATCCAACCTTCTTCCCAATCCACAGAGAGTCCTAGAGGAACTTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020185.5 |
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| CDS-3UTR TCA 90 bp | TCACTTTGGCATAGAACTGGTGTTCATAGTCTGAGGTCTCAACAGAAAGGTCACGCAGCAGAAGCAGCGTaGGCAGCAACAGTGGCGGCG | + |
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Preference number: 4 (lower is better) Translates to: SLWHRTGVHSLRSQQKGHAAEAA*AATVAA Trigger: CGCCGCCACTGTTGCTGCTCACGCTGCTTCTGCTGC...GTGACCTTTCTGTTGAGACCTCAGACTATGAACACCAGTTCTATGCCAAAGTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217389.2 |
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| CDS-3UTR CCA 90 bp | GGACTCTCTGTGGATTGGGAAGAAGGTTGGATGGAAGCCAATCACATGGATGAGCAGGGCAACCTCTGGTaGGCTGACTTGAGTTTCCAA | + |
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Preference number: 4 (lower is better) Translates to: GLSVDWEEGWMEANHMDEQGNLW*ADLSFQ Trigger: TTGGAAACTCAAGTCAGCCCACCAGAGGTTGCCCTG...CTCATCCATGTGATTGGCTTCCATCCAACCTTCTTCCCAATCCACAGAGAGTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020185.5 |
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| CDS-3UTR CCA 90 bp | GGACTCTCTGTGGATTGGGAAGAAGGTTGGATGGAAGCCAATCACATGGATGAGTGTCAGGGCAACCTCTaGTGGGCTGACTTGAGTTTC | + |
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Preference number: 4 (lower is better) Translates to: GLSVDWEEGWMEANHMDECQGNL*WADLSF Trigger: GAAACTCAAGTCAGCCCACCAGAGGTTGCCCTGACA...CTCATCCATGTGATTGGCTTCCATCCAACCTTCTTCCCAATCCACAGAGAGTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020185.5 |
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| CDS-3UTR TCA 90 bp | TATAAAGTCCCCACCCAACCTGCAAATCTTACTCTGTCTACAACAAAGCTCAGGCCAGTGTGCTGTTGGTaGCACACTGGGACCACGTTC | + |
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Preference number: 4 (lower is better) Translates to: YKVPTQPANLTLSTTKLRPVCCW*HTGTTF Trigger: GAACGTGGTCCCAGTGTGTCACCAACAGCACACTGG...CCTGAGCTTTGTTGTAGACAGAGTAAGATTTGCAGGTTGGGTGGGGACTTTATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020185.5 |
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| CDS-3UTR TCA 90 bp | AACAAAGCTCAGGGCTCTGCATTTCAGAAAGTTCCTCTAGGACTCTCTGTGGATCACAGCCTGCCAGTTTaGGGGTCCCAATCCACTACT | + |
|
Preference number: 4 (lower is better) Translates to: NKAQGSAFQKVPLGLSVDHSLPV*GSQSTT Trigger: AGTAGTGGATTGGGACCCTCAAACTGGCAGGCTGTG...ATCCACAGAGAGTCCTAGAGGAACTTTCTGAAATGCAGAGCCCTGAGCTTTGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020185.5 |
||
| CDS-3UTR CCA 90 bp | AACAAAGCTCAGGGCTCTGCATTTCAGAAAGTTCCTCTAGGACTCTCTGTGGATCCCATTCGGAGCACCTaGCTTCCCAAATGGCCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: NKAQGSAFQKVPLGLSVDPIRST*LPKWPS Trigger: TGAAGGCCATTTGGGAAGCCAGGTGCTCCGAATGGG...ATCCACAGAGAGTCCTAGAGGAACTTTCTGAAATGCAGAGCCCTGAGCTTTGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020185.5 |
||
| CDS-3UTR TCA 90 bp | CAGGGCTCTGCATTTCAGAAAGTTCCTCTAGGACTCTCTGTGGATTGGGAAGAACAACCTCTGGTGGGCTaGCTTGAGTTTCCAAGAAAG | + |
|
Preference number: 4 (lower is better) Translates to: QGSAFQKVPLGLSVDWEEQPLVG*LEFPRK Trigger: CTTTCTTGGAAACTCAAGTCAGCCCACCAGAGGTTG...TTCTTCCCAATCCACAGAGAGTCCTAGAGGAACTTTCTGAAATGCAGAGCCCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020185.5 |
||
| CDS-3UTR TCA 90 bp | AGAGCACTGGGAAAGTCAACACCTCCCGGGGCCTCTGCAGCCCTTAAGCATTTCGAACCTAAGAAACCCTaGGAAATGAAATATTGCACA | + |
|
Preference number: 4 (lower is better) Translates to: RALGKSTPPGASAALKHFEPKKP*EMKYCT Trigger: TGTGCAATATTTCATTTCTCAGGGTTTCTTAGGTTC...GAAATGCTTAAGGGCTGCAGAGGCCCCGGGAGGTGTTGACTTTCCCAGTGCTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217389.2 |
||
| CDS-3UTR GCA 90 bp | CAGGGCTCTGCATTTCAGAAAGTTCCTCTAGGACTCTCTGTGGATTGGGAAGAATCCCAGGCCTCATTGTaGTCAGGGTCATTAACACTG | + |
|
Preference number: 4 (lower is better) Translates to: QGSAFQKVPLGLSVDWEESQASL*SGSLTL Trigger: CAGTGTTAATGACCCTGAGCACAATGAGGCCTGGGA...TTCTTCCCAATCCACAGAGAGTCCTAGAGGAACTTTCTGAAATGCAGAGCCCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020185.5 |
||
| CDS-3UTR GCA 90 bp | GAAAGTTCCTCTAGGACTCTCTGTGGATTGGGAAGAAGGTTGGATGGAAGCCAACTCTGGCTTGTCAGGTaGCTGGTTCTCATAGAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: ESSSRTLCGLGRRLDGSQLWLVR*LVLIES Trigger: AGACTCTATGAGAACCAGGCACCTGACAAGCCAGAG...TTGGCTTCCATCCAACCTTCTTCCCAATCCACAGAGAGTCCTAGAGGAACTTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020185.5 |
||
| CDS-3UTR CCA 90 bp | GGACTCTCTGTGGATTGGGAAGAAGGTTGGATGGAAGCCAATCACATGGATGAGACCTGGCTTCCCAAATaGCCTTCACTTTGGCATAGA | + |
|
Preference number: 4 (lower is better) Translates to: GLSVDWEEGWMEANHMDETWLPK*PSLWHR Trigger: TCTATGCCAAAGTGAAGGCCATTTGGGAAGCCAGGT...CTCATCCATGTGATTGGCTTCCATCCAACCTTCTTCCCAATCCACAGAGAGTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020185.5 |
||
| CDS-3UTR TCA 90 bp | GGACTCTCTGTGGATTGGGAAGAAGGTTGGATGGAAGCCAATCACATGGATGAGGAACTTCCAAAGTACTaGTGCACTGCTTCTGAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: GLSVDWEEGWMEANHMDEELPKY*CTASEK Trigger: CTTCTCAGAAGCAGTGCATCAGTACTTTGGAAGTTC...CTCATCCATGTGATTGGCTTCCATCCAACCTTCTTCCCAATCCACAGAGAGTCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020185.5 |
||
| CDS-3UTR TCA 90 bp | TGGCCTTCACTTTGGCATAGAACTGGTGTTCATAGTCTGAGGTCTCAACAGAAAATGAGAACTCCCAAGTaGAACCAGCAGAGGCGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: WPSLWHRTGVHSLRSQQKMRTPK*NQQRRP Trigger: TGGACGCCTCTGCTGGTTTCACTTGGGAGTTCTCAT...TTTCTGTTGAGACCTCAGACTATGAACACCAGTTCTATGCCAAAGTGAAGGCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217389.2 |
||
| CDS-3UTR CCA 90 bp | GTTCCTCTAGGACTCTCTGTGGATTGGGAAGAAGGTTGGATGGAAGCCAATCACTCTTTTCCACTTCTCTaGTGCTGTCAGGGCAATAGA | + |
|
Preference number: 4 (lower is better) Translates to: VPLGLSVDWEEGWMEANHSFPLL*CCQGNR Trigger: TCTATTGCCCTGACAGCACCAGAGAAGTGGAAAAGA...GTGATTGGCTTCCATCCAACCTTCTTCCCAATCCACAGAGAGTCCTAGAGGAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020185.5 |
||
| CDS-3UTR GCA 90 bp | CAGGGCTCTGCATTTCAGAAAGTTCCTCTAGGACTCTCTGTGGATTGGGAAGAACTGGGTGTTTTTCCTTaGCAACATGGATGTAACGGT | + |
|
Preference number: 4 (lower is better) Translates to: QGSAFQKVPLGLSVDWEELGVFP*QHGCNG Trigger: ACCGTTACATCCATGTTGGCAAGGAAAAACACCCAG...TTCTTCCCAATCCACAGAGAGTCCTAGAGGAACTTTCTGAAATGCAGAGCCCTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020185.5 |
||
| CDS-3UTR GCA 90 bp | AAAATAATAAACTGGGATCATGGTGAGCTCTTCTGTATAAAGTCCCCACCCAACGTGTCTCCGTCTCTTTaGTCAGCACCACAGACAGCG | + |
|
Preference number: 4 (lower is better) Translates to: KIINWDHGELFCIKSPPNVSPSL*SAPQTA Trigger: CGCTGTCTGTGGTGCTGAGCAAAGAGACGGAGACAC...GTTGGGTGGGGACTTTATACAGAAGAGCTCACCATGATCCCAGTTTATTATTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020185.5 |
||
| CDS-3UTR CCA 90 bp | GGACTCTCTGTGGATTGGGAAGAAGGTTGGATGGAAGCCAATCACATGGATGAGTTCATTTTCTTTCTCTaGCTTGTCAGGTGCCTGGTT | + |
|
Preference number: 4 (lower is better) Translates to: GLSVDWEEGWMEANHMDEFIFFL*LVRCLV Trigger: AACCAGGCACCTGACAAGCCAGAGAAAGAAAATGAA...CTCATCCATGTGATTGGCTTCCATCCAACCTTCTTCCCAATCCACAGAGAGTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020185.5 |
||
| CDS-3UTR TCA 90 bp | AGAACTGGTGTTCATAGTCTGAGGTCTCAACAGAAAGGTCACAGTAGGTCCTGTATTGCACAGTGTATGTaGCTTCAACTCCGTGTAGAC | + |
|
Preference number: 4 (lower is better) Translates to: RTGVHSLRSQQKGHSRSCIAQCM*LQLRVD Trigger: GTCTACACGGAGTTGAAGTCACATACACTGTGCAAT...ACAGGACCTACTGTGACCTTTCTGTTGAGACCTCAGACTATGAACACCAGTTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217389.2 |
||
| CDS-3UTR GCA 90 bp | CAGGGCTCTGCATTTCAGAAAGTTCCTCTAGGACTCTCTGTGGATTGGGAAGAATCTGGTGGATTCCAATaGAGGACATTCTTCATGTTG | + |
|
Preference number: 4 (lower is better) Translates to: QGSAFQKVPLGLSVDWEESGGFQ*RTFFML Trigger: CAACATGAAGAATGTCCTGCATTGGAATCCACCAGA...TTCTTCCCAATCCACAGAGAGTCCTAGAGGAACTTTCTGAAATGCAGAGCCCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020185.5 |
||
| CDS-3UTR GCA 90 bp | CAGGGCTCTGCATTTCAGAAAGTTCCTCTAGGACTCTCTGTGGATTGGGAAGAAACAGCGTCCATCAAATaGGAAGAGCATCCTAAATGT | + |
|
Preference number: 4 (lower is better) Translates to: QGSAFQKVPLGLSVDWEETASIK*EEHPKC Trigger: ACATTTAGGATGCTCTTCGCATTTGATGGACGCTGT...TTCTTCCCAATCCACAGAGAGTCCTAGAGGAACTTTCTGAAATGCAGAGCCCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020185.5 |
||
| CDS-3UTR GCA 90 bp | CTTCTGTATAAAGTCCCCACCCAACCTGCAAATCTTACTCTGTCTACAACAAAGAAGGGATACACAGCCTaGCAGTTTGAGGGTCCCAAT | + |
|
Preference number: 4 (lower is better) Translates to: LLYKVPTQPANLTLSTTKKGYTA*QFEGPN Trigger: ATTGGGACCCTCAAACTGGCAGGCTGTGTATCCCTT...CTTTGTTGTAGACAGAGTAAGATTTGCAGGTTGGGTGGGGACTTTATACAGAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020185.5 |
||
| CDS-3UTR CCA 90 bp | TATAAAGTCCCCACCCAACCTGCAAATCTTACTCTGTCTACAACAAAGCTCAGGACAAGGGACTCCACGTaGACACAATACAGAGTGTTG | + |
|
Preference number: 4 (lower is better) Translates to: YKVPTQPANLTLSTTKLRTRDST*TQYRVL Trigger: CAACACTCTGTATTGTGTCCACGTGGAGTCCCTTGT...CCTGAGCTTTGTTGTAGACAGAGTAAGATTTGCAGGTTGGGTGGGGACTTTATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020185.5 |
||
| CDS-3UTR TCA 90 bp | TATAAAGTCCCCACCCAACCTGCAAATCTTACTCTGTCTACAACAAAGCTCAGGATTGCACAGTGTATGTaGCTTCAACTCCGTGTAGAC | + |
|
Preference number: 4 (lower is better) Translates to: YKVPTQPANLTLSTTKLRIAQCM*LQLRVD Trigger: GTCTACACGGAGTTGAAGTCACATACACTGTGCAAT...CCTGAGCTTTGTTGTAGACAGAGTAAGATTTGCAGGTTGGGTGGGGACTTTATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020185.5 |
||
| CDS-3UTR GCA 90 bp | GAGCTCTTCTGTATAAAGTCCCCACCCAACCTGCAAATCTTACTCTGTCTACAATTTCCACTTCTCTGGTaGTGTCAGGGCAATAGAGAT | + |
|
Preference number: 4 (lower is better) Translates to: ELFCIKSPPNLQILLCLQFPLLW*CQGNRD Trigger: ATCTCTATTGCCCTGACAGCACCAGAGAAGTGGAAA...TTGTAGACAGAGTAAGATTTGCAGGTTGGGTGGGGACTTTATACAGAAGAGCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020185.5 |
||
| CDS-3UTR GCA 90 bp | CAGGGCTCTGCATTTCAGAAAGTTCCTCTAGGACTCTCTGTGGATTGGGAAGAAAACCAAGTAGCCAATTaGGGAGAAAAGAAACACGAT | + |
|
Preference number: 4 (lower is better) Translates to: QGSAFQKVPLGLSVDWEENQVAN*GEKKHD Trigger: ATCGTGTTTCTTTTCTCCGCAATTGGCTACTTGGTT...TTCTTCCCAATCCACAGAGAGTCCTAGAGGAACTTTCTGAAATGCAGAGCCCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020185.5 |
||
| CDS-3UTR GCA 90 bp | GGGCTCTGCATTTCAGAAAGTTCCTCTAGGACTCTCTGTGGATTGGGAAGAAGGTTCAGCCATTTCTTCTaGCCATATATGAAATATTGC | + |
|
Preference number: 4 (lower is better) Translates to: GLCISESSSRTLCGLGRRFSHFF*PYMKYC Trigger: GCAATATTTCATATATGGGCAGAAGAAATGGCTGAA...CCTTCTTCCCAATCCACAGAGAGTCCTAGAGGAACTTTCTGAAATGCAGAGCCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020185.5 |
||
| CDS-3UTR CCA 90 bp | CAGGGCTCTGCATTTCAGAAAGTTCCTCTAGGACTCTCTGTGGATTGGGAAGAATGCATAGAAACAGTGTaGTCTTGTGGATTTCTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: QGSAFQKVPLGLSVDWEECIETV*SCGFLF Trigger: GAAAAGAAATCCACAAGACCACACTGTTTCTATGCA...TTCTTCCCAATCCACAGAGAGTCCTAGAGGAACTTTCTGAAATGCAGAGCCCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020185.5 |
||
| CDS-3UTR CCA 90 bp | TATAAAGTCCCCACCCAACCTGCAAATCTTACTCTGTCTACAACAAAGCTCAGGCAGTACCAAATTTGCTaGGTGTTTTTCCTTGCCAAC | + |
|
Preference number: 4 (lower is better) Translates to: YKVPTQPANLTLSTTKLRQYQIC*VFFLAN Trigger: GTTGGCAAGGAAAAACACCCAGCAAATTTGGTACTG...CCTGAGCTTTGTTGTAGACAGAGTAAGATTTGCAGGTTGGGTGGGGACTTTATA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020185.5 |
||
| 3UTR CAA 72 bp | ATTTCATTATGGTGGCCCTGCCAGCATCCTTCATGGTaGGGTCAGTCACATATCAGGGAATGGAAAATTATA | + |
|
Preference number: 4 (lower is better) Translates to: ISLWWPCQHPSW*GQSHIREWKII Trigger: TATAATTTTCCATTCCCTGATATGTGACTGACCCAACCATGAAGGATGCTGGCAGGGCCACCATAATGAAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217389.2 |
||
| CDS-3UTR TCA 90 bp | TATAAAGTCCCCACCCAACCTGCAAATCTTACTCTGTCTACAACAAAGCTCAGGTTTAGCCTTCCATGCTaGTGTTTGAACTTCCAAAGT | + |
|
Preference number: 4 (lower is better) Translates to: YKVPTQPANLTLSTTKLRFSLPC*CLNFQS Trigger: ACTTTGGAAGTTCAAACATCAGCATGGAAGGCTAAA...CCTGAGCTTTGTTGTAGACAGAGTAAGATTTGCAGGTTGGGTGGGGACTTTATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020185.5 |
||
| CDS-3UTR GCA 90 bp | TTTAGAGGCATTCAGCCATTTCTTCTGCCCATATCGTGCTTTGAATTGCCTGTTTCTGGTGGATTCCAATaGAGGACATTCTTCATGTTG | + |
|
Preference number: 4 (lower is better) Translates to: FRGIQPFLLPISCFELPVSGGFQ*RTFFML Trigger: CAACATGAAGAATGTCCTGCATTGGAATCCACCAGA...AACAGGCAATTCAAAGCACGATATGGGCAGAAGAAATGGCTGAATGCCTCTAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217389.2 |
||
| CDS-3UTR GCA 90 bp | CTTCTGTATAAAGTCCCCACCCAACCTGCAAATCTTACTCTGTCTACAACAAAGAATCAGTACCAAATTTaGTGGGTGTTTTTCCTTGCC | + |
|
Preference number: 4 (lower is better) Translates to: LLYKVPTQPANLTLSTTKNQYQI*WVFFLA Trigger: GGCAAGGAAAAACACCCAGCAAATTTGGTACTGATT...CTTTGTTGTAGACAGAGTAAGATTTGCAGGTTGGGTGGGGACTTTATACAGAAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020185.5 |
||
| CDS-3UTR CCA 90 bp | CTTCTGTATAAAGTCCCCACCCAACCTGCAAATCTTACTCTGTCTACAACAAAGAACAGTGTGGTCTTGTaGATTTCTTTTCCACTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: LLYKVPTQPANLTLSTTKNSVVL*ISFPLL Trigger: GAGAAGTGGAAAAGAAATCCACAAGACCACACTGTT...CTTTGTTGTAGACAGAGTAAGATTTGCAGGTTGGGTGGGGACTTTATACAGAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020185.5 |
||
| 3UTR CAA 72 bp | CACGTTCTTCTCGACTTAGTGTTATACACAGACACATaGTACTTCAAATTGGGGTATATCTGTTGCATAGAA | + |
|
Preference number: 4 (lower is better) Translates to: HVLLDLVLYTDT*YFKLGYICCIE Trigger: TTCTATGCAACAGATATACCCCAATTTGAAGTACAATGTGTCTGTGTATAACACTAAGTCGAGAAGAACGTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217389.2 |
||
| CDS CCA 90 bp | GCGTCCCGAAGCGGCCAGCAGCAGAAGCAGCGTGAGCAGCAACAGTaGCGGCGGGTCCGGGTGGCCCGGCGCCGGGGTCCCGGGAGTGTG | + |
|
Preference number: 5 (lower is better) Translates to: ASRSGQQQKQREQQQ*RRVRVARRRGPGSV Trigger: CACACTCCCGGGACCCCGGCGCCGGGCCACCCGGACCCGCCGCCACTGTTGCTGCTCACGCTGCTTCTGCTGCTGGCCGCTTCGGGACGC 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020185.5 ENSMUST00000217389.2 |
||
| CDS TCA 90 bp | CACAAGGAACTGCGCGTCCCGAAGCGGCCAGCAGCAGAAGCAGCGTaGGCAGCAACAGTGGCGGCGGGTCCGGGTGGCCCGGCGCCGGGG | + |
|
Preference number: 5 (lower is better) Translates to: HKELRVPKRPAAEAA*AATVAAGPGGPAPG Trigger: CCCCGGCGCCGGGCCACCCGGACCCGCCGCCACTGTTGCTGCTCACGCTGCTTCTGCTGCTGGCCGCTTCGGGACGCGCAGTTCCTTGTG 73% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020185.5 ENSMUST00000217389.2 |
||
| CDS GCA 90 bp | GTGTCTCCGTCTCTTTGCTCAGCACCACAGACAGCGTCCATCAAATaGGAAGAGCATCCTAAATGTTGCCCCTCCACCTCCTCCCAGTGC | + |
|
Preference number: 5 (lower is better) Translates to: VSPSLCSAPQTASIK*EEHPKCCPSTSSQC Trigger: GCACTGGGAGGAGGTGGAGGGGCAACATTTAGGATGCTCTTCGCATTTGATGGACGCTGTCTGTGGTGCTGAGCAAAGAGACGGAGACAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020185.5 |
||
| CDS GCA 90 bp | GGTGATATTTGTAGGTTTAGGCAAACCACAGAAGACACAAGGAACTaGGCGTCCCGAAGCGGCCAGCAGCAGAAGCAGCGTGAGCAGCAA | + |
|
Preference number: 5 (lower is better) Translates to: GDICRFRQTTEDTRN*ASRSGQQQKQREQQ Trigger: TTGCTGCTCACGCTGCTTCTGCTGCTGGCCGCTTCGGGACGCGCAGTTCCTTGTGTCTTCTGTGGTTTGCCTAAACCTACAAATATCACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020185.5 ENSMUST00000217389.2 |
||
| CDS GCA 90 bp | CTGTTAAGCCACCCATGCTGGGTTAGGGAGGTGTCTCCGTCTCTTTaGTCAGCACCACAGACAGCGTCCATCAAATGCGAAGAGCATCCT | + |
|
Preference number: 5 (lower is better) Translates to: LLSHPCWVREVSPSL*SAPQTASIKCEEHP Trigger: AGGATGCTCTTCGCATTTGATGGACGCTGTCTGTGGTGCTGAGCAAAGAGACGGAGACACCTCCCTAACCCAGCATGGGTGGCTTAACAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020185.5 |
||
| CDS CCA 90 bp | CCAAGTTTGCTGAAGTCACCAGTGGCTCAGATATTTTCTCTGTTCTaGCCGCCTCTTCCGGCTCACAGGACAGTTGGATTTCACCCTCCC | + |
|
Preference number: 5 (lower is better) Translates to: PSLLKSPVAQIFSLF*PPLPAHRTVGFHPP Trigger: GGGAGGGTGAAATCCAACTGTCCTGTGAGCCGGAAGAGGCGGCCAGAACAGAGAAAATATCTGAGCCACTGGTGACTTCAGCAAACTTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020185.5 |
||
| CDS-3UTR CAA 90 bp | GTTCCTCTAGGACTCTCTGTGGATTGGGAAGAAGGTTGGATGGAAGCCAATCACAGGACCAGTGTGCTGTaGGTGACACACTGGGACCAC | + |
|
Preference number: 5 (lower is better) Translates to: VPLGLSVDWEEGWMEANHRTSVL*VTHWDH Trigger: GTGGTCCCAGTGTGTCACCAACAGCACACTGGTCCT...GTGATTGGCTTCCATCCAACCTTCTTCCCAATCCACAGAGAGTCCTAGAGGAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020185.5 |
||
| CDS-3UTR CAA 90 bp | GGACTCTCTGTGGATTGGGAAGAAGGTTGGATGGAAGCCAATCACATGGATGAGACACAGCCTGCCAGTTaGAGGGTCCCAATCCACTAC | + |
|
Preference number: 5 (lower is better) Translates to: GLSVDWEEGWMEANHMDETQPAS*RVPIHY Trigger: GTAGTGGATTGGGACCCTCAAACTGGCAGGCTGTGT...CTCATCCATGTGATTGGCTTCCATCCAACCTTCTTCCCAATCCACAGAGAGTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020185.5 |
||
| CDS-3UTR CAA 90 bp | CAGGGCTCTGCATTTCAGAAAGTTCCTCTAGGACTCTCTGTGGATTGGGAAGAAACACAATACAGAGTGTaGGGCTCCAGCCAGCTGAGG | + |
|
Preference number: 5 (lower is better) Translates to: QGSAFQKVPLGLSVDWEETQYRV*GSSQLR Trigger: CCTCAGCTGGCTGGAGCCCAACACTCTGTATTGTGT...TTCTTCCCAATCCACAGAGAGTCCTAGAGGAACTTTCTGAAATGCAGAGCCCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020185.5 |
||
| CDS TCA 90 bp | TCACGGCCAAAGATAGGTAAGGAAGGGATACACAGCCTGCCAGTTTaGGGGTCCCAATCCACTACTGTTATAGATGTCTCTTCCTCTGGC | + |
|
Preference number: 5 (lower is better) Translates to: SRPKIGKEGIHSLPV*GSQSTTVIDVSSSG Trigger: GCCAGAGGAAGAGACATCTATAACAGTAGTGGATTGGGACCCTCAAACTGGCAGGCTGTGTATCCCTTCCTTACCTATCTTTGGCCGTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020185.5 |
||
| CDS-3UTR CAA 90 bp | GAGCTCTTCTGTATAAAGTCCCCACCCAACCTGCAAATCTTACTCTGTCTACAAGGTGTCTCCGTCTCTTaGCTCAGCACCACAGACAGC | + |
|
Preference number: 5 (lower is better) Translates to: ELFCIKSPPNLQILLCLQGVSVS*LSTTDS Trigger: GCTGTCTGTGGTGCTGAGCAAAGAGACGGAGACACC...TTGTAGACAGAGTAAGATTTGCAGGTTGGGTGGGGACTTTATACAGAAGAGCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020185.5 |
||
| CDS-3UTR CAA 90 bp | CAGGGCTCTGCATTTCAGAAAGTTCCTCTAGGACTCTCTGTGGATTGGGAAGAATTTTCTTTCTCTGGCTaGTCAGGTGCCTGGTTCTCA | + |
|
Preference number: 5 (lower is better) Translates to: QGSAFQKVPLGLSVDWEEFSFSG*SGAWFS Trigger: TGAGAACCAGGCACCTGACAAGCCAGAGAAAGAAAA...TTCTTCCCAATCCACAGAGAGTCCTAGAGGAACTTTCTGAAATGCAGAGCCCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020185.5 |
||
| CDS-3UTR CAA 90 bp | AACAAAGCTCAGGGCTCTGCATTTCAGAAAGTTCCTCTAGGACTCTCTGTGGATCTCTGGTGGGCTGACTaGAGTTTCCAAGAAAGGATA | + |
|
Preference number: 5 (lower is better) Translates to: NKAQGSAFQKVPLGLSVDLWWAD*SFQERI Trigger: TATCCTTTCTTGGAAACTCAAGTCAGCCCACCAGAG...ATCCACAGAGAGTCCTAGAGGAACTTTCTGAAATGCAGAGCCCTGAGCTTTGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020185.5 |
||
| CDS-3UTR CAA 90 bp | AAAATAATAAACTGGGATCATGGTGAGCTCTTCTGTATAAAGTCCCCACCCAACGGCTCCCAGGCCTCATaGTGCTCAGGGTCATTAACA | + |
|
Preference number: 5 (lower is better) Translates to: KIINWDHGELFCIKSPPNGSQAS*CSGSLT Trigger: TGTTAATGACCCTGAGCACAATGAGGCCTGGGAGCC...GTTGGGTGGGGACTTTATACAGAAGAGCTCACCATGATCCCAGTTTATTATTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020185.5 |
||
| CDS-3UTR CAA 90 bp | AAAATAATAAACTGGGATCATGGTGAGCTCTTCTGTATAAAGTCCCCACCCAACGCTGTGGGTCCAAGTTaGCTGAAGTCACCAGTGGCT | + |
|
Preference number: 5 (lower is better) Translates to: KIINWDHGELFCIKSPPNAVGPS*LKSPVA Trigger: AGCCACTGGTGACTTCAGCAAACTTGGACCCACAGC...GTTGGGTGGGGACTTTATACAGAAGAGCTCACCATGATCCCAGTTTATTATTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020185.5 |
||
| CDS-3UTR CAA 90 bp | GGACTCTCTGTGGATTGGGAAGAAGGTTGGATGGAAGCCAATCACATGGATGAGATGTCATCACTGCTTTaGTCCAGTAAATTCATATCC | + |
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Preference number: 5 (lower is better) Translates to: GLSVDWEEGWMEANHMDEMSSLL*SSKFIS Trigger: GGATATGAATTTACTGGACAAAAGCAGTGATGACAT...CTCATCCATGTGATTGGCTTCCATCCAACCTTCTTCCCAATCCACAGAGAGTCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020185.5 |
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| CDS-3UTR CAA 90 bp | CAGGGCTCTGCATTTCAGAAAGTTCCTCTAGGACTCTCTGTGGATTGGGAAGAACCCATATATGAAATATaGCACAGTGTATGTGACTTC | + |
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Preference number: 5 (lower is better) Translates to: QGSAFQKVPLGLSVDWEEPIYEI*HSVCDF Trigger: GAAGTCACATACACTGTGCAATATTTCATATATGGG...TTCTTCCCAATCCACAGAGAGTCCTAGAGGAACTTTCTGAAATGCAGAGCCCTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020185.5 |
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| CDS GCA 90 bp | CATTTAGAGGCATTCAGCCATTTCTTCTGCCCATATATGAAATATTaGACAGTGTATGTGACTTCAACTCCGTGTAGACTCTCTGGTGGA | + |
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Preference number: 5 (lower is better) Translates to: HLEAFSHFFCPYMKY*TVYVTSTPCRLSGG Trigger: TCCACCAGAGAGTCTACACGGAGTTGAAGTCACATACACTGTGCAATATTTCATATATGGGCAGAAGAAATGGCTGAATGCCTCTAAATG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020185.5 |
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| CDS-3UTR CAA 90 bp | CTTCTGTATAAAGTCCCCACCCAACCTGCAAATCTTACTCTGTCTACAACAAAGATTGGGGTATATCTGTaGCATAGAAACAGTGTGGTC | + |
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Preference number: 5 (lower is better) Translates to: LLYKVPTQPANLTLSTTKIGVYL*HRNSVV Trigger: GACCACACTGTTTCTATGCAACAGATATACCCCAAT...CTTTGTTGTAGACAGAGTAAGATTTGCAGGTTGGGTGGGGACTTTATACAGAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020185.5 |
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| CDS-3UTR CAA 90 bp | CTTCTGTATAAAGTCCCCACCCAACCTGCAAATCTTACTCTGTCTACAACAAAGAAACCAAGTAGCCAATaGCGGAGAAAAGAAACACGA | + |
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Preference number: 5 (lower is better) Translates to: LLYKVPTQPANLTLSTTKKPSSQ*RRKETR Trigger: TCGTGTTTCTTTTCTCCGCAATTGGCTACTTGGTTT...CTTTGTTGTAGACAGAGTAAGATTTGCAGGTTGGGTGGGGACTTTATACAGAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020185.5 |
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| CDS-3UTR CAA 90 bp | AGAACTGGTGTTCATAGTCTGAGGTCTCAACAGAAAGGTCACAGTAGGTCCTGTCTGAGAAATGAAATATaGCACAGTGTATGTGACTTC | + |
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Preference number: 5 (lower is better) Translates to: RTGVHSLRSQQKGHSRSCLRNEI*HSVCDF Trigger: GAAGTCACATACACTGTGCAATATTTCATTTCTCAG...ACAGGACCTACTGTGACCTTTCTGTTGAGACCTCAGACTATGAACACCAGTTCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217389.2 |
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| CDS GCA 90 bp | TTTTTCCTTGCCAACATGGATGTAACGGTAAACCAAGTAGCCAATTaGGGAGAAAAGAAACACGATAACAGATGTGAGGAAGACATACCA | + |
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Preference number: 5 (lower is better) Translates to: FFLANMDVTVNQVAN*GEKKHDNRCEEDIP Trigger: TGGTATGTCTTCCTCACATCTGTTATCGTGTTTCTTTTCTCCGCAATTGGCTACTTGGTTTACCGTTACATCCATGTTGGCAAGGAAAAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020185.5 |
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| CDS-3UTR CAA 90 bp | CTTCTGTATAAAGTCCCCACCCAACCTGCAAATCTTACTCTGTCTACAACAAAGAAATCAGTACCAAATTaGCTGGGTGTTTTTCCTTGC | + |
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Preference number: 5 (lower is better) Translates to: LLYKVPTQPANLTLSTTKKSVPN*LGVFPC Trigger: GCAAGGAAAAACACCCAGCAAATTTGGTACTGATTT...CTTTGTTGTAGACAGAGTAAGATTTGCAGGTTGGGTGGGGACTTTATACAGAAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020185.5 |
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| CDS GCA 90 bp | TTTCATTTCTATAAATCAGTACCAAATTTGCTGGGTGTTTTTCCTTaGCAACATGGATGTAACGGTAAACCAAGTAGCCAATTGCGGAGA | + |
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Preference number: 5 (lower is better) Translates to: FHFYKSVPNLLGVFP*QHGCNGKPSSQLRR Trigger: TCTCCGCAATTGGCTACTTGGTTTACCGTTACATCCATGTTGGCAAGGAAAAACACCCAGCAAATTTGGTACTGATTTATAGAAATGAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020185.5 |
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| CDS GCA 90 bp | AAAGACTCTTGTGCCAATTTCATTTCTATAAATCAGTACCAAATTTaGTGGGTGTTTTTCCTTGCCAACATGGATGTAACGGTAAACCAA | + |
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Preference number: 5 (lower is better) Translates to: KDSCANFISINQYQI*WVFFLANMDVTVNQ Trigger: TTGGTTTACCGTTACATCCATGTTGGCAAGGAAAAACACCCAGCAAATTTGGTACTGATTTATAGAAATGAAATTGGCACAAGAGTCTTT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020185.5 |
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| CDS GCA 72 bp | TGTAGGTTTAGGCAAACCACAGAAGACACAAGGAACTaGGCGTCCCGAAGCGGCCAGCAGCAGAAGCAGCGT | + |
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Preference number: 6 (lower is better) Translates to: CRFRQTTEDTRN*ASRSGQQQKQR Trigger: ACGCTGCTTCTGCTGCTGGCCGCTTCGGGACGCGCAGTTCCTTGTGTCTTCTGTGGTTTGCCTAAACCTACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020185.5 ENSMUST00000217389.2 |
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| CDS GCA 72 bp | TCCACCTCCTCCCAGTGCGGCTCCCAGGCCTCATTGTaGTCAGGGTCATTAACACTGATGTCATCACTGCTT | + |
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Preference number: 6 (lower is better) Translates to: STSSQCGSQASL*SGSLTLMSSLL Trigger: AAGCAGTGATGACATCAGTGTTAATGACCCTGAGCACAATGAGGCCTGGGAGCCGCACTGGGAGGAGGTGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020185.5 |
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| CDS GCA 72 bp | CACCCATGCTGGGTTAGGGAGGTGTCTCCGTCTCTTTaGTCAGCACCACAGACAGCGTCCATCAAATGCGAA | + |
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Preference number: 6 (lower is better) Translates to: HPCWVREVSPSL*SAPQTASIKCE Trigger: TTCGCATTTGATGGACGCTGTCTGTGGTGCTGAGCAAAGAGACGGAGACACCTCCCTAACCCAGCATGGGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020185.5 |
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| CDS CAA 72 bp | CTCGCCAGTTGTCAGGGCAACCTCTGGTGGGCTGACTaGAGTTTCCAAGAAAGGATAGAAGCGTTCCGTCTC | + |
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Preference number: 6 (lower is better) Translates to: LASCQGNLWWAD*SFQERIEAFRL Trigger: GAGACGGAACGCTTCTATCCTTTCTTGGAAACTCAAGTCAGCCCACCAGAGGTTGCCCTGACAACTGGCGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020185.5 |
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| CDS TCA 72 bp | ACTTCTCGCCAGTTGTCAGGGCAACCTCTGGTGGGCTaGCTTGAGTTTCCAAGAAAGGATAGAAGCGTTCCG | + |
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Preference number: 6 (lower is better) Translates to: TSRQLSGQPLVG*LEFPRKDRSVP Trigger: CGGAACGCTTCTATCCTTTCTTGGAAACTCAAGTCAGCCCACCAGAGGTTGCCCTGACAACTGGCGAGAAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020185.5 |
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| CDS CCA 72 bp | GATGGACTTCTCGCCAGTTGTCAGGGCAACCTCTGGTaGGCTGACTTGAGTTTCCAAGAAAGGATAGAAGCG | + |
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Preference number: 6 (lower is better) Translates to: DGLLASCQGNLW*ADLSFQERIEA Trigger: CGCTTCTATCCTTTCTTGGAAACTCAAGTCAGCCCACCAGAGGTTGCCCTGACAACTGGCGAGAAGTCCATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020185.5 |
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| CDS CAA 90 bp | GCTCCTGACCCAGGTGATGTAGGTCTTCAAGCTGTGGGTCCAAGTTaGCTGAAGTCACCAGTGGCTCAGATATTTTCTCTGTTCTGGCCG | + |
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Preference number: 6 (lower is better) Translates to: APDPGDVGLQAVGPS*LKSPVAQIFSLFWP Trigger: CGGCCAGAACAGAGAAAATATCTGAGCCACTGGTGACTTCAGCAAACTTGGACCCACAGCTTGAAGACCTACATCACCTGGGTCAGGAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020185.5 |
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| CDS CCA 72 bp | CTGAAGTCACCAGTGGCTCAGATATTTTCTCTGTTCTaGCCGCCTCTTCCGGCTCACAGGACAGTTGGATTT | + |
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Preference number: 6 (lower is better) Translates to: LKSPVAQIFSLF*PPLPAHRTVGF Trigger: AAATCCAACTGTCCTGTGAGCCGGAAGAGGCGGCCAGAACAGAGAAAATATCTGAGCCACTGGTGACTTCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020185.5 |
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| CDS CCA 72 bp | AGAGATGGACTTCTCGCCAGTTGTCAGGGCAACCTCTaGTGGGCTGACTTGAGTTTCCAAGAAAGGATAGAA | + |
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Preference number: 6 (lower is better) Translates to: RDGLLASCQGNL*WADLSFQERIE Trigger: TTCTATCCTTTCTTGGAAACTCAAGTCAGCCCACCAGAGGTTGCCCTGACAACTGGCGAGAAGTCCATCTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020185.5 |
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| CDS CAA 72 bp | CCAGGTGATGTAGGTCTTCAAGCTGTGGGTCCAAGTTaGCTGAAGTCACCAGTGGCTCAGATATTTTCTCTG | + |
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Preference number: 6 (lower is better) Translates to: PGDVGLQAVGPS*LKSPVAQIFSL Trigger: CAGAGAAAATATCTGAGCCACTGGTGACTTCAGCAAACTTGGACCCACAGCTTGAAGACCTACATCACCTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020185.5 |
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| CDS TCA 72 bp | AAGATAGGTAAGGAAGGGATACACAGCCTGCCAGTTTaGGGGTCCCAATCCACTACTGTTATAGATGTCTCT | + |
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Preference number: 6 (lower is better) Translates to: KIGKEGIHSLPV*GSQSTTVIDVS Trigger: AGAGACATCTATAACAGTAGTGGATTGGGACCCTCAAACTGGCAGGCTGTGTATCCCTTCCTTACCTATCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020185.5 |
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| CDS TCA 72 bp | AACCAGCAGAGGCGTCCACCCGAACCTAAGAAACCCTaGGAAATGAAATATTGCACAGTGTATGTGACTTCA | + |
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Preference number: 6 (lower is better) Translates to: NQQRRPPEPKKP*EMKYCTVYVTS Trigger: TGAAGTCACATACACTGTGCAATATTTCATTTCTCAGGGTTTCTTAGGTTCGGGTGGACGCCTCTGCTGGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217389.2 |
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| CDS GCA 72 bp | GCATTCAGCCATTTCTTCTGCCCATATATGAAATATTaGACAGTGTATGTGACTTCAACTCCGTGTAGACTC | + |
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Preference number: 6 (lower is better) Translates to: AFSHFFCPYMKY*TVYVTSTPCRL Trigger: GAGTCTACACGGAGTTGAAGTCACATACACTGTGCAATATTTCATATATGGGCAGAAGAAATGGCTGAATGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020185.5 |
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| CDS GCA 72 bp | TATAAATCAGTACCAAATTTGCTGGGTGTTTTTCCTTaGCAACATGGATGTAACGGTAAACCAAGTAGCCAA | + |
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Preference number: 6 (lower is better) Translates to: YKSVPNLLGVFP*QHGCNGKPSSQ Trigger: TTGGCTACTTGGTTTACCGTTACATCCATGTTGGCAAGGAAAAACACCCAGCAAATTTGGTACTGATTTATA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020185.5 |
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