Pregenerated sensors for IL20 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000026416Ensembl transcript IDs: ENSMUST00000027673.11, ENSMUST00000188581.2
Found 25 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CCA 90 bp | AAGGGGTGGTGGTTTGAGGCCATCTTCGTGGTGCTGAGGACTGGAACTCTTGAGAGAAATGCCAGCACCTaGGGCCATGTCTTCATGGTG | + |
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Preference number: 2 (lower is better) Translates to: KGWWFEAIFVVLRTGTLERNAST*GHVFMV Trigger: CACCATGAAGACATGGCCCCAGGTGCTGGCATTTCT...CTCAAGAGTTCCAGTCCTCAGCACCACGAAGATGGCCTCAAACCACCACCCCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027673.11 |
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| 3UTR-3UTR TCA 90 bp | TGTAGAAATAATATACACATAGCTAGCACTAAGTTATATCACAAAGGGGTGGTGCCATCTTCGTGGTGCTaGGGACTGGAACTCTTGAGT | + |
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Preference number: 2 (lower is better) Translates to: CRNNIHIASTKLYHKGVVPSSWC*GLELLS Trigger: ACTCAAGAGTTCCAGTCCTCAGCACCACGAAGATGG...CACCACCCCTTTGTGATATAACTTAGTGCTAGCTATGTGTATATTATTTCTACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027673.11 |
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| 3UTR-3UTR TCA 90 bp | TGTAGAAATAATATACACATAGCTAGCACTAAGTTATATCACAAAGGGGTGGTGGAGGACTGGAACTCTTaGGTAGAAATGCCAGCACCT | + |
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Preference number: 2 (lower is better) Translates to: CRNNIHIASTKLYHKGVVEDWNS*VEMPAP Trigger: AGGTGCTGGCATTTCTACTCAAGAGTTCCAGTCCTC...CACCACCCCTTTGTGATATAACTTAGTGCTAGCTATGTGTATATTATTTCTACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027673.11 |
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| 3UTR-3UTR TCA 90 bp | TGTAGAAATAATATACACATAGCTAGCACTAAGTTATATCACAAAGGGGTGGTGATGTCTTCATGGTGCTaGGGTCTGAGATTCTTGGAC | + |
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Preference number: 2 (lower is better) Translates to: CRNNIHIASTKLYHKGVVMSSWC*GLRFLD Trigger: GTCCAAGAATCTCAGACCTCAGCACCATGAAGACAT...CACCACCCCTTTGTGATATAACTTAGTGCTAGCTATGTGTATATTATTTCTACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027673.11 |
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| 3UTR TCA 72 bp | GAAATGCCAGCACCTGGGGCCATGTCTTCATGGTGCTaGGGTCTGAGATTCTTGGACAGGAGTGTTCTCAGC | + |
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Preference number: 3 (lower is better) Translates to: EMPAPGAMSSWC*GLRFLDRSVLS Trigger: GCTGAGAACACTCCTGTCCAAGAATCTCAGACCTCAGCACCATGAAGACATGGCCCCAGGTGCTGGCATTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027673.11 |
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| 3UTR TCA 72 bp | CAAAGGGGTGGTGGTTTGAGGCCATCTTCGTGGTGCTaGGGACTGGAACTCTTGAGTAGAAATGCCAGCACC | + |
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Preference number: 3 (lower is better) Translates to: QRGGGLRPSSWC*GLELLSRNAST Trigger: GGTGCTGGCATTTCTACTCAAGAGTTCCAGTCCTCAGCACCACGAAGATGGCCTCAAACCACCACCCCTTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027673.11 |
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| 3UTR TCA 72 bp | GCTAGCACTAAGTTATATCACAAAGGGGTGGTGGTTTaGGGCCATCTTCGTGGTGCTGAGGACTGGAACTCT | + |
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Preference number: 3 (lower is better) Translates to: ASTKLYHKGVVV*GHLRGAEDWNS Trigger: AGAGTTCCAGTCCTCAGCACCACGAAGATGGCCTCAAACCACCACCCCTTTGTGATATAACTTAGTGCTAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027673.11 |
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| CDS-3UTR TCA 90 bp | CTAAGTTATATCACAAAGGGGTGGTGGTTTGAGGCCATCTTCGTGGTGCTGAGGCCAAATGGAGGGTCTTaGGCCCAGTTAAAGGAGTCC | + |
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Preference number: 4 (lower is better) Translates to: LSYITKGWWFEAIFVVLRPNGGS*AQLKES Trigger: GGACTCCTTTAACTGGGCTCAAGACCCTCCATTTGG...CCTCAGCACCACGAAGATGGCCTCAAACCACCACCCCTTTGTGATATAACTTAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027673.11 |
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| CDS-3UTR TCA 90 bp | AAGGGGTGGTGGTTTGAGGCCATCTTCGTGGTGCTGAGGACTGGAACTCTTGAGGTGAGAATGACAGACTaGGAGGTCCTTCTTGATGAT | + |
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Preference number: 4 (lower is better) Translates to: KGWWFEAIFVVLRTGTLEVRMTD*EVLLDD Trigger: ATCATCAAGAAGGACCTCTCAGTCTGTCATTCTCAC...CTCAAGAGTTCCAGTCCTCAGCACCACGAAGATGGCCTCAAACCACCACCCCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027673.11 |
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| CDS-3UTR GCA 90 bp | AAGGGGTGGTGGTTTGAGGCCATCTTCGTGGTGCTGAGGACTGGAACTCTTGAGTTCCCCACAATGACATaGCATGTGAGAATGACAGAC | + |
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Preference number: 4 (lower is better) Translates to: KGWWFEAIFVVLRTGTLEFPTMT*HVRMTD Trigger: GTCTGTCATTCTCACATGGCATGTCATTGTGGGGAA...CTCAAGAGTTCCAGTCCTCAGCACCACGAAGATGGCCTCAAACCACCACCCCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027673.11 |
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| CDS-3UTR TCA 90 bp | CTAAGTTATATCACAAAGGGGTGGTGGTTTGAGGCCATCTTCGTGGTGCTGAGGGGGTCTGGTAGACTTTaGATACCCTGTCCAGATAGA | + |
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Preference number: 4 (lower is better) Translates to: LSYITKGWWFEAIFVVLRGSGRL*IPCPDR Trigger: TCTATCTGGACAGGGTATTCAAAGTCTACCAGACCC...CCTCAGCACCACGAAGATGGCCTCAAACCACCACCCCTTTGTGATATAACTTAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027673.11 |
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| CDS-3UTR TCA 90 bp | TGGGGCCATGTCTTCATGGTGCTGAGGTCTGAGATTCTTGGACAGGAGTGTTCTGAAGTTCCAACTCTATaGAGTGACTCAGAATTTGGT | + |
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Preference number: 4 (lower is better) Translates to: WGHVFMVLRSEILGQECSEVPTL*SDSEFG Trigger: ACCAAATTCTGAGTCACTTCATAGAGTTGGAACTTC...AGAACACTCCTGTCCAAGAATCTCAGACCTCAGCACCATGAAGACATGGCCCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027673.11 |
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| CDS-3UTR TCA 90 bp | TGGGGCCATGTCTTCATGGTGCTGAGGTCTGAGATTCTTGGACAGGAGTGTTCTTCCAACTCTATGAAGTaGCTCAGAATTTGGTTGTAT | + |
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Preference number: 4 (lower is better) Translates to: WGHVFMVLRSEILGQECSSNSMK*LRIWLY Trigger: ATACAACCAAATTCTGAGTCACTTCATAGAGTTGGA...AGAACACTCCTGTCCAAGAATCTCAGACCTCAGCACCATGAAGACATGGCCCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027673.11 |
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| CDS-3UTR CCA 90 bp | TGTAGAAATAATATACACATAGCTAGCACTAAGTTATATCACAAAGGGGTGGTGACACAGCTTCCCAAATaGAGGGTCTTGAGCCCAGTT | + |
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Preference number: 4 (lower is better) Translates to: CRNNIHIASTKLYHKGVVTQLPK*RVLSPV Trigger: AACTGGGCTCAAGACCCTCCATTTGGGAAGCTGTGT...CACCACCCCTTTGTGATATAACTTAGTGCTAGCTATGTGTATATTATTTCTACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027673.11 |
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| CDS-3UTR CAA 90 bp | AAGGGGTGGTGGTTTGAGGCCATCTTCGTGGTGCTGAGGACTGGAACTCTTGAGCCCAAATGGAGGGTCTaGAGCCCAGTTAAAGGAGTC | + |
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Preference number: 5 (lower is better) Translates to: KGWWFEAIFVVLRTGTLEPKWRV*SPVKGV Trigger: GACTCCTTTAACTGGGCTCAAGACCCTCCATTTGGG...CTCAAGAGTTCCAGTCCTCAGCACCACGAAGATGGCCTCAAACCACCACCCCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027673.11 |
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| CDS-3UTR CAA 90 bp | AAGGGGTGGTGGTTTGAGGCCATCTTCGTGGTGCTGAGGACTGGAACTCTTGAGGGTTGTATTTCTCCATaGCTTCTTCCCCACAATGAC | + |
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Preference number: 5 (lower is better) Translates to: KGWWFEAIFVVLRTGTLEGCISP*LLPHND Trigger: GTCATTGTGGGGAAGAAGCAATGGAGAAATACAACC...CTCAAGAGTTCCAGTCCTCAGCACCACGAAGATGGCCTCAAACCACCACCCCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027673.11 |
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| CDS CCA 90 bp | TTTTGTATTGCCTGTAGGTTTGCAGTAATCACACAGCTTCCCAAATaGAGGGTCTTGAGCCCAGTTAAAGGAGTCCAGAGAAGAAAACCC | + |
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Preference number: 5 (lower is better) Translates to: FCIACRFAVITQLPK*RVLSPVKGVQRRKP Trigger: GGGTTTTCTTCTCTGGACTCCTTTAACTGGGCTCAAGACCCTCCATTTGGGAAGCTGTGTGATTACTGCAAACCTACAGGCAATACAAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027673.11 ENSMUST00000188581.2 |
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| CDS-3UTR CAA 90 bp | TGTAGAAATAATATACACATAGCTAGCACTAAGTTATATCACAAAGGGGTGGTGATGATAAGAAAGGAGTaGGCGAGGCTGCTGATCTTT | + |
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Preference number: 5 (lower is better) Translates to: CRNNIHIASTKLYHKGVVMIRKE*ARLLIF Trigger: AAAGATCAGCAGCCTCGCCAACTCCTTTCTTATCAT...CACCACCCCTTTGTGATATAACTTAGTGCTAGCTATGTGTATATTATTTCTACA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027673.11 |
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| CDS-3UTR CAA 90 bp | TGTAGAAATAATATACACATAGCTAGCACTAAGTTATATCACAAAGGGGTGGTGACTGAGAGGTCCTTCTaGATGATAAGAAAGGAGTTG | + |
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Preference number: 5 (lower is better) Translates to: CRNNIHIASTKLYHKGVVTERSF*MIRKEL Trigger: CAACTCCTTTCTTATCATCAAGAAGGACCTCTCAGT...CACCACCCCTTTGTGATATAACTTAGTGCTAGCTATGTGTATATTATTTCTACA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027673.11 |
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| CDS-3UTR CAA 90 bp | TGTAGAAATAATATACACATAGCTAGCACTAAGTTATATCACAAAGGGGTGGTGGAAGTGACTCAGAATTaGGTTGTATTTCTCCATTGC | + |
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Preference number: 5 (lower is better) Translates to: CRNNIHIASTKLYHKGVVEVTQN*VVFLHC Trigger: GCAATGGAGAAATACAACCAAATTCTGAGTCACTTC...CACCACCCCTTTGTGATATAACTTAGTGCTAGCTATGTGTATATTATTTCTACA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027673.11 |
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| CDS CAA 90 bp | GCCTGTAGGTTTGCAGTAATCACACAGCTTCCCAAATGGAGGGTCTaGAGCCCAGTTAAAGGAGTCCAGAGAAGAAAACCCACAGCGGAG | + |
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Preference number: 6 (lower is better) Translates to: ACRFAVITQLPKWRV*SPVKGVQRRKPTAE Trigger: CTCCGCTGTGGGTTTTCTTCTCTGGACTCCTTTAACTGGGCTCAAGACCCTCCATTTGGGAAGCTGTGTGATTACTGCAAACCTACAGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027673.11 ENSMUST00000188581.2 |
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| CDS CAA 72 bp | CAGACTGAGAGGTCCTTCTTGATGATAAGAAAGGAGTaGGCGAGGCTGCTGATCTTTCTCAGGGTATGGTGG | + |
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Preference number: 6 (lower is better) Translates to: QTERSFLMIRKE*ARLLIFLRVWW Trigger: CCACCATACCCTGAGAAAGATCAGCAGCCTCGCCAACTCCTTTCTTATCATCAAGAAGGACCTCTCAGTCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027673.11 ENSMUST00000188581.2 |
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| CDS TCA 72 bp | TTCTCAGGGTATGGTGGTCAGGGGTCTGGTAGACTTTaGATACCCTGTCCAGATAGAATCTCACTAGATGAC | + |
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Preference number: 6 (lower is better) Translates to: FSGYGGQGSGRL*IPCPDRISLDD Trigger: GTCATCTAGTGAGATTCTATCTGGACAGGGTATTCAAAGTCTACCAGACCCCTGACCACCATACCCTGAGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027673.11 ENSMUST00000188581.2 |
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| CDS CAA 72 bp | TTTGCAGTAATCACACAGCTTCCCAAATGGAGGGTCTaGAGCCCAGTTAAAGGAGTCCAGAGAAGAAAACCC | + |
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Preference number: 6 (lower is better) Translates to: FAVITQLPKWRV*SPVKGVQRRKP Trigger: GGGTTTTCTTCTCTGGACTCCTTTAACTGGGCTCAAGACCCTCCATTTGGGAAGCTGTGTGATTACTGCAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027673.11 ENSMUST00000188581.2 |
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| CDS CAA 90 bp | TACCACCGCTGCCTGAAGTTCCAACTCTATGAAGTGACTCAGAATTaGGTTGTATTTCTCCATTGCTTCTTCCCCACAATGACATGCCAT | + |
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Preference number: 6 (lower is better) Translates to: YHRCLKFQLYEVTQN*VVFLHCFFPTMTCH Trigger: ATGGCATGTCATTGTGGGGAAGAAGCAATGGAGAAATACAACCAAATTCTGAGTCACTTCATAGAGTTGGAACTTCAGGCAGCGGTGGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027673.11 ENSMUST00000188581.2 |
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