Pregenerated sensors for IL2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000027720Ensembl transcript IDs: ENSMUST00000029275.6
Found 27 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | AGGACGGAAGAAGTAAAAGTGTGCAGGTGTAGATTCCAAACCAGCAACCATCTTGTTCACAGGAATAACTaGGAAGTTATTTTAGCGCTT | + |
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Preference number: 2 (lower is better) Translates to: RTEEVKVCRCRFQTSNHLVHRNN*EVILAL Trigger: AAGCGCTAAAATAACTTCTCAGTTATTCCTGTGAAC...AAGATGGTTGCTGGTTTGGAATCTACACCTGCACACTTTTACTTCTTCCGTCCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029275.6 |
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| 3UTR-3UTR CCA 90 bp | GTGTGCAGGTGTAGATTCCAAACCAGCAACCATCTTTATCAGGTGAAGATGAATACATTTTTGAGCCCTTaGGGCTTACAAAAAGAATCT | + |
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Preference number: 2 (lower is better) Translates to: VCRCRFQTSNHLYQVKMNTFLSP*GLQKES Trigger: AGATTCTTTTTGTAAGCCCCAAGGGCTCAAAAATGT...ATTCATCTTCACCTGATAAAGATGGTTGCTGGTTTGGAATCTACACCTGCACAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000029275.6 |
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| 3UTR-3UTR GCA 90 bp | TGCAGGTGTAGATTCCAAACCAGCAACCATCTTTATCAGGTGAAGATGAATTCTTTAGCGCTTACTTTGTaGTGTCCTAAAAATGACAGA | + |
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Preference number: 2 (lower is better) Translates to: CRCRFQTSNHLYQVKMNSLALTL*CPKNDR Trigger: TCTGTCATTTTTAGGACAGCACAAAGTAAGCGCTAA...AGAATTCATCTTCACCTGATAAAGATGGTTGCTGGTTTGGAATCTACACCTGCA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029275.6 |
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| 3UTR TCA 72 bp | TCTTTATCAGGTGAAGATGAATTCTTCAGTAAACTCTaGGCTGATGTTAGCTCCCTGGAGAGGAGATCTTTT | + |
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Preference number: 3 (lower is better) Translates to: SLSGEDEFFSKL*ADVSSLERRSF Trigger: AAAAGATCTCCTCTCCAGGGAGCTAACATCAGCTCAGAGTTTACTGAAGAATTCATCTTCACCTGATAAAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029275.6 |
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| CDS-3UTR GCA 90 bp | GTGTGCAGGTGTAGATTCCAAACCAGCAACCATCTTTATCAGGTGAAGATGAATAGCTGCTCCAGGTGCTaGTGCTGCTGCTGCTGCTGC | + |
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Preference number: 4 (lower is better) Translates to: VCRCRFQTSNHLYQVKMNSCSRC*CCCCCC Trigger: GCAGCAGCAGCAGCAGCAGCAGCACCTGGAGCAGCT...ATTCATCTTCACCTGATAAAGATGGTTGCTGGTTTGGAATCTACACCTGCACAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029275.6 |
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| CDS-3UTR GCA 90 bp | GTGTGCAGGTGTAGATTCCAAACCAGCAACCATCTTTATCAGGTGAAGATGAATAACAGCTGCTCCAGGTaGTGCTGCTGCTGCTGCTGC | + |
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Preference number: 4 (lower is better) Translates to: VCRCRFQTSNHLYQVKMNNSCSR*CCCCCC Trigger: GCAGCAGCAGCAGCAGCAGCACCTGGAGCAGCTGTT...ATTCATCTTCACCTGATAAAGATGGTTGCTGGTTTGGAATCTACACCTGCACAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029275.6 |
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| CDS-3UTR GCA 90 bp | AGGACGGAAGAAGTAAAAGTGTGCAGGTGTAGATTCCAAACCAGCAACCATCTTAGGTCCATCAACAGCTaGTCCAGGTGCTGCTGCTGC | + |
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Preference number: 4 (lower is better) Translates to: RTEEVKVCRCRFQTSNHLRSINS*SRCCCC Trigger: GCAGCAGCAGCACCTGGAGCAGCTGTTGATGGACCT...AAGATGGTTGCTGGTTTGGAATCTACACCTGCACACTTTTACTTCTTCCGTCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029275.6 |
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| CDS-3UTR GCA 90 bp | GTGTGCAGGTGTAGATTCCAAACCAGCAACCATCTTTATCAGGTGAAGATGAATTGCTGCTGCTGCTGCTaGTGTGCTTCCGCTGTAGAG | + |
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Preference number: 4 (lower is better) Translates to: VCRCRFQTSNHLYQVKMNCCCCC*CASAVE Trigger: CTCTACAGCGGAAGCACAGCAGCAGCAGCAGCAGCA...ATTCATCTTCACCTGATAAAGATGGTTGCTGGTTTGGAATCTACACCTGCACAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029275.6 |
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| CDS-3UTR GCA 90 bp | AGGACGGAAGAAGTAAAAGTGTGCAGGTGTAGATTCCAAACCAGCAACCATCTTCAATGTGACACAGGATaGGAGCTGCATGCTGTACAT | + |
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Preference number: 4 (lower is better) Translates to: RTEEVKVCRCRFQTSNHLQCDTG*ELHAVH Trigger: ATGTACAGCATGCAGCTCGCATCCTGTGTCACATTG...AAGATGGTTGCTGGTTTGGAATCTACACCTGCACACTTTTACTTCTTCCGTCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029275.6 |
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| CDS-3UTR TCA 90 bp | AGGACGGAAGAAGTAAAAGTGTGCAGGTGTAGATTCCAAACCAGCAACCATCTTGTTGAGATGATGCTTTaGCAGAAGGCTATCCATCTC | + |
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Preference number: 4 (lower is better) Translates to: RTEEVKVCRCRFQTSNHLVEMML*QKAIHL Trigger: GAGATGGATAGCCTTCTGTCAAAGCATCATCTCAAC...AAGATGGTTGCTGGTTTGGAATCTACACCTGCACACTTTTACTTCTTCCGTCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029275.6 |
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| CDS-3UTR GCA 90 bp | AAAGTGTGCAGGTGTAGATTCCAAACCAGCAACCATCTTTATCAGGTGAAGATGTGTAATTCTCCATCCTaGTCAGGAGCTCCTGTAGGT | + |
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Preference number: 4 (lower is better) Translates to: KVCRCRFQTSNHLYQVKMCNSPS*SGAPVG Trigger: ACCTACAGGAGCTCCTGAGCAGGATGGAGAATTACA...CATCTTCACCTGATAAAGATGGTTGCTGGTTTGGAATCTACACCTGCACACTTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029275.6 |
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| CDS-3UTR GCA 90 bp | GAAGTTATTTTAGCGCTTACTTTGTGCTGTCCTAAAAATGACAGACATCTGAGCGTCAAATCCAGAACATaGCGCAGAGGTCCAAGTTCA | + |
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Preference number: 4 (lower is better) Translates to: EVILALTLCCPKNDRHLSVKSRT*RRGPSS Trigger: TGAACTTGGACCTCTGCGGCATGTTCTGGATTTGAC...GCTCAGATGTCTGTCATTTTTAGGACAGCACAAAGTAAGCGCTAAAATAACTTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029275.6 |
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| CDS-3UTR CCA 90 bp | GTGTGCAGGTGTAGATTCCAAACCAGCAACCATCTTTATCAGGTGAAGATGAATGATCTTTCAATTCTGTaGCCTGCTTGGGCAAGTAAA | + |
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Preference number: 4 (lower is better) Translates to: VCRCRFQTSNHLYQVKMNDLSIL*PAWASK Trigger: TTTACTTGCCCAAGCAGGCCACAGAATTGAAAGATC...ATTCATCTTCACCTGATAAAGATGGTTGCTGGTTTGGAATCTACACCTGCACAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029275.6 |
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| CDS-3UTR TCA 90 bp | AAAGTGTGCAGGTGTAGATTCCAAACCAGCAACCATCTTTATCAGGTGAAGATGTCATCTTCTAGGCACTaGAGATCTTTCAATTCTGTG | + |
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Preference number: 4 (lower is better) Translates to: KVCRCRFQTSNHLYQVKMSSSRH*RSFNSV Trigger: CACAGAATTGAAAGATCTTCAGTGCCTAGAAGATGA...CATCTTCACCTGATAAAGATGGTTGCTGGTTTGGAATCTACACCTGCACACTTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029275.6 |
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| CDS-3UTR TCA 90 bp | AAAGTGTGCAGGTGTAGATTCCAAACCAGCAACCATCTTTATCAGGTGAAGATGTTATTGAGGGCTTGTTaGGATGATGCTTTGACAGAA | + |
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Preference number: 4 (lower is better) Translates to: KVCRCRFQTSNHLYQVKMLLRAC*DDALTE Trigger: TTCTGTCAAAGCATCATCTCAACAAGCCCTCAATAA...CATCTTCACCTGATAAAGATGGTTGCTGGTTTGGAATCTACACCTGCACACTTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029275.6 |
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| CDS-3UTR CCA 90 bp | AAAGTGTGCAGGTGTAGATTCCAAACCAGCAACCATCTTTATCAGGTGAAGATGGACTCATCATCGAATTaGCACTCAAATGTGTTGTCA | + |
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Preference number: 4 (lower is better) Translates to: KVCRCRFQTSNHLYQVKMDSSSN*HSNVLS Trigger: TGACAACACATTTGAGTGCCAATTCGATGATGAGTC...CATCTTCACCTGATAAAGATGGTTGCTGGTTTGGAATCTACACCTGCACACTTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029275.6 |
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| CDS-3UTR GCA 90 bp | AAAGTGTGCAGGTGTAGATTCCAAACCAGCAACCATCTTTATCAGGTGAAGATGCCAATTGAAAGCTTTTaGTTTGAGTCAAATCCAGAA | + |
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Preference number: 4 (lower is better) Translates to: KVCRCRFQTSNHLYQVKMPIESF*FESNPE Trigger: TTCTGGATTTGACTCAAAGCAAAAGCTTTCAATTGG...CATCTTCACCTGATAAAGATGGTTGCTGGTTTGGAATCTACACCTGCACACTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029275.6 |
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| CDS GCA 90 bp | ATCCTGCTCAGGAGCTCCTGTAGGTCCATCAACAGCTGCTCCAGGTaGTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGTGCTTCC | + |
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Preference number: 5 (lower is better) Translates to: ILLRSSCRSINSCSR*CCCCCCCCCCCCAS Trigger: GGAAGCACAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCACCTGGAGCAGCTGTTGATGGACCTACAGGAGCTCCTGAGCAGGAT 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029275.6 |
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| CDS-3UTR CAA 90 bp | AGGACGGAAGAAGTAAAAGTGTGCAGGTGTAGATTCCAAACCAGCAACCATCTTGAAGTGGGTGCGCTGTaGACAAGGAGCACAAGTGTC | + |
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Preference number: 5 (lower is better) Translates to: RTEEVKVCRCRFQTSNHLEVGAL*TRSTSV Trigger: GACACTTGTGCTCCTTGTCAACAGCGCACCCACTTC...AAGATGGTTGCTGGTTTGGAATCTACACCTGCACACTTTTACTTCTTCCGTCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029275.6 |
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| CDS-3UTR CAA 90 bp | AGGACGGAAGAAGTAAAAGTGTGCAGGTGTAGATTCCAAACCAGCAACCATCTTGAAAGTCCACCACAGTaGCTGACTCATCATCGAATT | + |
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Preference number: 5 (lower is better) Translates to: RTEEVKVCRCRFQTSNHLESPPQ*LTHHRI Trigger: AATTCGATGATGAGTCAGCAACTGTGGTGGACTTTC...AAGATGGTTGCTGGTTTGGAATCTACACCTGCACACTTTTACTTCTTCCGTCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029275.6 |
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| CDS-3UTR CAA 90 bp | GAAGTTATTTTAGCGCTTACTTTGTGCTGTCCTAAAAATGACAGACATCTGAGCACAGTTACTCTGATATaGCTGATGAAATTCTCAGCA | + |
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Preference number: 5 (lower is better) Translates to: EVILALTLCCPKNDRHLSTVTLI*LMKFSA Trigger: TGCTGAGAATTTCATCAGCAATATCAGAGTAACTGT...GCTCAGATGTCTGTCATTTTTAGGACAGCACAAAGTAAGCGCTAAAATAACTTC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029275.6 |
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| CDS TCA 72 bp | ACATGCCGCAGAGGTCCAAGTTCATCTTCTAGGCACTaGAGATCTTTCAATTCTGTGGCCTGCTTGGGCAAG | + |
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Preference number: 6 (lower is better) Translates to: TCRRGPSSSSRH*RSFNSVACLGK Trigger: CTTGCCCAAGCAGGCCACAGAATTGAAAGATCTTCAGTGCCTAGAAGATGAACTTGGACCTCTGCGGCATGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029275.6 |
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| CDS TCA 72 bp | GGCTATCCATCTCCTCAGAAAGTCCACCACAGTTGCTaGCTCATCATCGAATTGGCACTCAAATGTGTTGTC | + |
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Preference number: 6 (lower is better) Translates to: GYPSPQKVHHSC*LIIELALKCVV Trigger: GACAACACATTTGAGTGCCAATTCGATGATGAGTCAGCAACTGTGGTGGACTTTCTGAGGAGATGGATAGCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029275.6 |
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| CDS CAA 72 bp | AGAAGGCTATCCATCTCCTCAGAAAGTCCACCACAGTaGCTGACTCATCATCGAATTGGCACTCAAATGTGT | + |
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Preference number: 6 (lower is better) Translates to: RRLSISSESPPQ*LTHHRIGTQMC Trigger: ACACATTTGAGTGCCAATTCGATGATGAGTCAGCAACTGTGGTGGACTTTCTGAGGAGATGGATAGCCTTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029275.6 |
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| CDS CCA 72 bp | AGAAAGTCCACCACAGTTGCTGACTCATCATCGAATTaGCACTCAAATGTGTTGTCAGAGCCCTTTAGTTTT | + |
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Preference number: 6 (lower is better) Translates to: RKSTTVADSSSN*HSNVLSEPFSF Trigger: AAAACTAAAGGGCTCTGACAACACATTTGAGTGCCAATTCGATGATGAGTCAGCAACTGTGGTGGACTTTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029275.6 |
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| CDS CAA 72 bp | GAAATTCTCAGCATCTTCCAATTGAAAGCTTTTGCTTaGAGTCAAATCCAGAACATGCCGCAGAGGTCCAAG | + |
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Preference number: 6 (lower is better) Translates to: EILSIFQLKAFA*SQIQNMPQRSK Trigger: CTTGGACCTCTGCGGCATGTTCTGGATTTGACTCAAAGCAAAAGCTTTCAATTGGAAGATGCTGAGAATTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029275.6 |
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| CDS CAA 90 bp | ATTGCTGATGAAATTCTCAGCATCTTCCAATTGAAAGCTTTTGCTTaGAGTCAAATCCAGAACATGCCGCAGAGGTCCAAGTTCATCTTC | + |
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Preference number: 6 (lower is better) Translates to: IADEILSIFQLKAFA*SQIQNMPQRSKFIF Trigger: GAAGATGAACTTGGACCTCTGCGGCATGTTCTGGATTTGACTCAAAGCAAAAGCTTTCAATTGGAAGATGCTGAGAATTTCATCAGCAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029275.6 |
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