Pregenerated sensors for IL1RN (Mus musculus)
Ensembl gene IDs: ENSMUSG00000026981Ensembl transcript IDs: ENSMUST00000114482.3, ENSMUST00000114485.9, ENSMUST00000114487.9, ENSMUST00000142093.7
Found 95 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AAGAGAGGGTTCATCCTTGGAGGGACCCAATACATAGCATGTGCATaGACGTGCGTGCGCACGCGCGCGCGCACGCACACACACACACAC | + |
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Preference number: 1 (lower is better) Translates to: KRGFILGGTQYIACA*TCVRTRARTHTHTH Trigger: GTGTGTGTGTGTGTGCGTGCGCGCGCGCGTGCGCACGCACGTGCATGCACATGCTATGTATTGGGTCCCTCCAAGGATGAACCCTCTCTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114482.3 ENSMUST00000114487.9 |
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| 3UTR CCA 90 bp | GGGGTAGGGTGGGTGGTAGAGCAGAAGACACCTAGGCCAAGCAAGTaGTCTAGACTTCACCCAGATGGCAGAGGCAACAAGAAAGGGCTT | + |
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Preference number: 1 (lower is better) Translates to: GVGWVVEQKTPRPSK*SRLHPDGRGNKKGL Trigger: AAGCCCTTTCTTGTTGCCTCTGCCATCTGGGTGAAGTCTAGACCACTTGCTTGGCCTAGGTGTCTTCTGCTCTACCACCCACCCTACCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114482.3 ENSMUST00000114487.9 |
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| 3UTR TCA 90 bp | ACACACACACACACACACACACACACACACACACACGAAGCTCCCTaGTCTCCAGAGTTCATTGTCTGGCAGAGGAAACAGTCAGGAACA | + |
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Preference number: 1 (lower is better) Translates to: THTHTHTHTHTHEAP*SPEFIVWQRKQSGT Trigger: TGTTCCTGACTGTTTCCTCTGCCAGACAATGAACTCTGGAGATCAGGGAGCTTCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114482.3 ENSMUST00000114487.9 |
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| 3UTR TCA 90 bp | GCAGATAGTGAGGAACTTCTTCAGGCATCTGTGGTAGGCTTGGAGTaGAGATGGTGTTTGGGCGGGACAGAGGAATATAGACTATTGGAC | + |
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Preference number: 1 (lower is better) Translates to: ADSEELLQASVVGLE*RWCLGGTEEYRLLD Trigger: GTCCAATAGTCTATATTCCTCTGTCCCGCCCAAACACCATCTTCACTCCAAGCCTACCACAGATGCCTGAAGAAGTTCCTCACTATCTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114482.3 ENSMUST00000114487.9 |
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| 3UTR GCA 90 bp | CAAGTGTTCATCTATTGGGTTGGGTGGAGCCGTCTGTGGCTCATTTaGTATCTTTGTCATTGTGTGGCATTGAGTGCAGATCTGATACTT | + |
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Preference number: 1 (lower is better) Translates to: QVFIYWVGWSRLWLI*YLCHCVALSADLIL Trigger: AAGTATCAGATCTGCACTCAATGCCACACAATGACAAAGATAGCAAATGAGCCACAGACGGCTCCACCCAACCCAATAGATGAACACTTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114487.9 |
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| 3UTR TCA 90 bp | AAGATTATTCTGGAATCATCATGGGGATTAGGCCAGCCAACAGACTaGGGCAGAGATCTATCATCAGAACTCTTCTGTCTCCTTCTACTG | + |
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Preference number: 1 (lower is better) Translates to: KIILESSWGLGQPTD*GRDLSSELFCLLLL Trigger: CAGTAGAAGGAGACAGAAGAGTTCTGATGATAGATCTCTGCCTCAGTCTGTTGGCTGGCCTAATCCCCATGATGATTCCAGAATAATCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114482.3 ENSMUST00000114487.9 |
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| 3UTR CCA 90 bp | ATTTTGAACCAAGTGTTCATCTATTGGGTTGGGTGGAGCCGTCTGTaGCTCATTTGCTATCTTTGTCATTGTGTGGCATTGAGTGCAGAT | + |
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Preference number: 1 (lower is better) Translates to: ILNQVFIYWVGWSRL*LICYLCHCVALSAD Trigger: ATCTGCACTCAATGCCACACAATGACAAAGATAGCAAATGAGCCACAGACGGCTCCACCCAACCCAATAGATGAACACTTGGTTCAAAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114487.9 |
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| 3UTR TCA 90 bp | CACAGGGTCACAGGATTCAGTGGAACATTTGTTTTCCCCCTTTGTTaGGTATTAACTTGTTACCTGGTGTTTGACCTGGGAGTATTTGAG | + |
|
Preference number: 1 (lower is better) Translates to: HRVTGFSGTFVFPLC*VLTCYLVFDLGVFE Trigger: CTCAAATACTCCCAGGTCAAACACCAGGTAACAAGTTAATACTCAACAAAGGGGGAAAACAAATGTTCCACTGAATCCTGTGACCCTGTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000114487.9 |
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| 3UTR CCA 90 bp | TATTTGAGCTTTAGTGATTTTGAACCAAGTGTTCATCTATTGGGTTaGGTGGAGCCGTCTGTGGCTCATTTGCTATCTTTGTCATTGTGT | + |
|
Preference number: 1 (lower is better) Translates to: YLSFSDFEPSVHLLG*VEPSVAHLLSLSLC Trigger: ACACAATGACAAAGATAGCAAATGAGCCACAGACGGCTCCACCCAACCCAATAGATGAACACTTGGTTCAAAATCACTAAAGCTCAAATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114487.9 |
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| 3UTR TCA 90 bp | TATCTTTGTCATTGTGTGGCATTGAGTGCAGATCTGATACTTGCATaGTTATTCATCCATGATAGGTATTTGGGTTGTTTTTACTTGGTG | + |
|
Preference number: 1 (lower is better) Translates to: YLCHCVALSADLILA*LFIHDRYLGCFYLV Trigger: CACCAAGTAAAAACAACCCAAATACCTATCATGGATGAATAATCATGCAAGTATCAGATCTGCACTCAATGCCACACAATGACAAAGATA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000114487.9 |
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| 3UTR CCA 90 bp | CATGATTATTCATCCATGATAGGTATTTGGGTTGTTTTTACTTGGTaGGTTCATGGTGGACAACACTACTTTATAACTTATAAGCAAGGT | + |
|
Preference number: 1 (lower is better) Translates to: HDYSSMIGIWVVFTW*VHGGQHYFITYKQG Trigger: ACCTTGCTTATAAGTTATAAAGTAGTGTTGTCCACCATGAACCCACCAAGTAAAAACAACCCAAATACCTATCATGGATGAATAATCATG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000114487.9 |
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| 3UTR-3UTR CCA 90 bp | ATCAGGAAGGGCCTGAGAGCCACATTTGCAGATAGTGAGGAACTTCTTCAGGCAGTGGCAGGGGTAGGGTaGGTGGTAGAGCAGAAGACA | + |
|
Preference number: 2 (lower is better) Translates to: IRKGLRATFADSEELLQAVAGVG*VVEQKT Trigger: TGTCTTCTGCTCTACCACCCACCCTACCCCTGCCAC...TGCCTGAAGAAGTTCCTCACTATCTGCAAATGTGGCTCTCAGGCCCTTCCTGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114482.3 ENSMUST00000114487.9 |
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| 3UTR CAA 90 bp | ACACACACACACACACACACGAAGCTCCCTGATCTCCAGAGTTCATaGTCTGGCAGAGGAAACAGTCAGGAACATAGCTACTTCCACATG | + |
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Preference number: 2 (lower is better) Translates to: THTHTHTKLPDLQSS*SGRGNSQEHSYFHM Trigger: CATGTGGAAGTAGCTATGTTCCTGACTGTTTCCTCTGCCAGACAATGAACTCTGGAGATCAGGGAGCTTCGTGTGTGTGTGTGTGTGTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114482.3 ENSMUST00000114487.9 |
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| 3UTR-3UTR CCA 90 bp | AAGGACATAATTTCCACAAGAAACCTCTTGCCGACATGGAATAAGGCTGGCCTAGATTGGTCTGGACTGTaGAAGTGCAGAACAATGGAA | + |
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Preference number: 2 (lower is better) Translates to: KDIISTRNLLPTWNKAGLDWSGL*KCRTME Trigger: TTCCATTGTTCTGCACTTCCACAGTCCAGACCAATC...TAGGCCAGCCTTATTCCATGTCGGCAAGAGGTTTCTTGTGGAAATTATGTCCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114482.3 ENSMUST00000114487.9 |
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| 3UTR CAA 90 bp | TGGGAGTATTTGAGCTTTAGTGATTTTGAACCAAGTGTTCATCTATaGGGTTGGGTGGAGCCGTCTGTGGCTCATTTGCTATCTTTGTCA | + |
|
Preference number: 2 (lower is better) Translates to: WEYLSFSDFEPSVHL*GWVEPSVAHLLSLS Trigger: TGACAAAGATAGCAAATGAGCCACAGACGGCTCCACCCAACCCAATAGATGAACACTTGGTTCAAAATCACTAAAGCTCAAATACTCCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114487.9 |
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| 3UTR-3UTR CCA 90 bp | TTCTGTTACCCAGAAATGAGGAAGAAGACTTTCAGAGAGGAGGTAACTATTTTCCCAGAGTTCATTGTCTaGCAGAGGAAACAGTCAGGA | + |
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Preference number: 2 (lower is better) Translates to: FCYPEMRKKTFREEVTIFPEFIV*QRKQSG Trigger: TCCTGACTGTTTCCTCTGCCAGACAATGAACTCTGG...GAAAATAGTTACCTCCTCTCTGAAAGTCTTCTTCCTCATTTCTGGGTAACAGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114487.9 |
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| 3UTR-3UTR CCA 90 bp | TATTCATCCATGATAGGTATTTGGGTTGTTTTTACTTGGTGGGTTCATGGTGGATATGTGATGCCCTGGTaGTTTCATCAAAAAGCCCAA | + |
|
Preference number: 2 (lower is better) Translates to: YSSMIGIWVVFTWWVHGGYVMPW*FHQKAQ Trigger: TTGGGCTTTTTGATGAAACCACCAGGGCATCACATA...TCCACCATGAACCCACCAAGTAAAAACAACCCAAATACCTATCATGGATGAATA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000114487.9 |
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| 3UTR TCA 72 bp | CTCATCCTGAGCACACATGGCAAACAACACAGGAGGTaGACCACGCCCACAGGGTCACAGGATTCAGTGGAA | + |
|
Preference number: 3 (lower is better) Translates to: LILSTHGKQHRR*TTPTGSQDSVE Trigger: TTCCACTGAATCCTGTGACCCTGTGGGCGTGGTTCACCTCCTGTGTTGTTTGCCATGTGTGCTCAGGATGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114487.9 |
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| 3UTR TCA 72 bp | CACACACACACACACACACACACACACGAAGCTCCCTaGTCTCCAGAGTTCATTGTCTGGCAGAGGAAACAG | + |
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Preference number: 3 (lower is better) Translates to: HTHTHTHTHEAP*SPEFIVWQRKQ Trigger: CTGTTTCCTCTGCCAGACAATGAACTCTGGAGATCAGGGAGCTTCGTGTGTGTGTGTGTGTGTGTGTGTGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114482.3 ENSMUST00000114487.9 |
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| 3UTR-3UTR CAA 90 bp | TCTGGAATCATCATGGGGATTAGGCCAGCCAACAGACTGAGGCAGAGATCTATCAGAGTGATCAGGCAGTaGGTGATTATTACAGGCCTC | + |
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Preference number: 3 (lower is better) Translates to: SGIIMGIRPANRLRQRSIRVIRQ*VIITGL Trigger: GAGGCCTGTAATAATCACCAACTGCCTGATCACTCT...GATAGATCTCTGCCTCAGTCTGTTGGCTGGCCTAATCCCCATGATGATTCCAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000114482.3 ENSMUST00000114485.9 ENSMUST00000114487.9 |
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| 3UTR GCA 72 bp | AGAACTCTTCTGTCTCCTTCTACTGTACATACACCCTaGAAAAGTTGTTCCTCAGGCCCCAATGATGGCCAG | + |
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Preference number: 3 (lower is better) Translates to: RTLLSPSTVHTP*KSCSSGPNDGQ Trigger: CTGGCCATCATTGGGGCCTGAGGAACAACTTTTGCAGGGTGTATGTACAGTAGAAGGAGACAGAAGAGTTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000114482.3 ENSMUST00000114485.9 ENSMUST00000114487.9 |
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| 3UTR TCA 72 bp | GTAAGGGAGTCACTTGGGGCATATTGTCAAGTGACTTaGTTGGTCTGGACTGTGGAAGTGCAGAACAATGGA | + |
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Preference number: 3 (lower is better) Translates to: VRESLGAYCQVT*LVWTVEVQNNG Trigger: TCCATTGTTCTGCACTTCCACAGTCCAGACCAATCAAGTCACTTGACAATATGCCCCAAGTGACTCCCTTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114482.3 ENSMUST00000114487.9 |
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| 3UTR CCA 72 bp | CAAGTGTTCATCTATTGGGTTGGGTGGAGCCGTCTGTaGCTCATTTGCTATCTTTGTCATTGTGTGGCATTG | + |
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Preference number: 3 (lower is better) Translates to: QVFIYWVGWSRL*LICYLCHCVAL Trigger: CAATGCCACACAATGACAAAGATAGCAAATGAGCCACAGACGGCTCCACCCAACCCAATAGATGAACACTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114487.9 |
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| 3UTR-3UTR CAA 90 bp | CATCAGAACTCTTCTGTCTCCTTCTACTGTACATACACCCTGCAAAAGTTGTTCAGAGTGATCAGGCAGTaGGTGATTATTACAGGCCTC | + |
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Preference number: 3 (lower is better) Translates to: HQNSSVSFYCTYTLQKLFRVIRQ*VIITGL Trigger: GAGGCCTGTAATAATCACCAACTGCCTGATCACTCT...GAACAACTTTTGCAGGGTGTATGTACAGTAGAAGGAGACAGAAGAGTTCTGATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000114482.3 ENSMUST00000114485.9 ENSMUST00000114487.9 |
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| 3UTR CCA 72 bp | GTGATTTTGAACCAAGTGTTCATCTATTGGGTTGGGTaGAGCCGTCTGTGGCTCATTTGCTATCTTTGTCAT | + |
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Preference number: 3 (lower is better) Translates to: VILNQVFIYWVG*SRLWLICYLCH Trigger: ATGACAAAGATAGCAAATGAGCCACAGACGGCTCCACCCAACCCAATAGATGAACACTTGGTTCAAAATCAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114487.9 |
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| 3UTR CCA 72 bp | TTTAGTGATTTTGAACCAAGTGTTCATCTATTGGGTTaGGTGGAGCCGTCTGTGGCTCATTTGCTATCTTTG | + |
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Preference number: 3 (lower is better) Translates to: FSDFEPSVHLLG*VEPSVAHLLSL Trigger: CAAAGATAGCAAATGAGCCACAGACGGCTCCACCCAACCCAATAGATGAACACTTGGTTCAAAATCACTAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114487.9 |
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| 3UTR TCA 72 bp | CATTGTGTGGCATTGAGTGCAGATCTGATACTTGCATaGTTATTCATCCATGATAGGTATTTGGGTTGTTTT | + |
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Preference number: 3 (lower is better) Translates to: HCVALSADLILA*LFIHDRYLGCF Trigger: AAAACAACCCAAATACCTATCATGGATGAATAATCATGCAAGTATCAGATCTGCACTCAATGCCACACAATG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114487.9 |
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| 3UTR CCA 72 bp | TCATCCATGATAGGTATTTGGGTTGTTTTTACTTGGTaGGTTCATGGTGGACAACACTACTTTATAACTTAT | + |
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Preference number: 3 (lower is better) Translates to: SSMIGIWVVFTW*VHGGQHYFITY Trigger: ATAAGTTATAAAGTAGTGTTGTCCACCATGAACCCACCAAGTAAAAACAACCCAAATACCTATCATGGATGA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000114487.9 |
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| 3UTR CCA 72 bp | TATTCATCCATGATAGGTATTTGGGTTGTTTTTACTTaGTGGGTTCATGGTGGACAACACTACTTTATAACT | + |
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Preference number: 3 (lower is better) Translates to: YSSMIGIWVVFT*WVHGGQHYFIT Trigger: AGTTATAAAGTAGTGTTGTCCACCATGAACCCACCAAGTAAAAACAACCCAAATACCTATCATGGATGAATA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000114487.9 |
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| CDS-3UTR TCA 90 bp | CAGGCCCCAATGATGGCCAGAGTGATCAGGCAGTTGGTGATTATTACAGGCCTCTCCTGGACAGGCAGCTaGCTCAAAGCTGGTGGTGGG | + |
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Preference number: 4 (lower is better) Translates to: QAPMMARVIRQLVIITGLSWTGS*LKAGGG Trigger: CCCACCACCAGCTTTGAGTCAGCTGCCTGTCCAGGA...GAGGCCTGTAATAATCACCAACTGCCTGATCACTCTGGCCATCATTGGGGCCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000114482.3 ENSMUST00000114485.9 ENSMUST00000114487.9 |
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| CDS-3UTR TCA 90 bp | ACACACACACACACACGAAGCTCCCTGATCTCCAGAGTTCATTGTCTGGCAGAGTCCTGGACAGGCAGCTaGCTCAAAGCTGGTGGTGGG | + |
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Preference number: 4 (lower is better) Translates to: THTHTRSSLISRVHCLAESWTGS*LKAGGG Trigger: CCCACCACCAGCTTTGAGTCAGCTGCCTGTCCAGGA...CTCTGCCAGACAATGAACTCTGGAGATCAGGGAGCTTCGTGTGTGTGTGTGTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114482.3 ENSMUST00000114487.9 |
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| CDS-3UTR GCA 90 bp | ATCATCATGGGGATTAGGCCAGCCAACAGACTGAGGCAGAGATCTATCATCAGAAGAAGGGCGGCAGGCTaGCTCAGCCTGTGCTGCTGT | + |
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Preference number: 4 (lower is better) Translates to: IIMGIRPANRLRQRSIIRRRAAG*LSLCCC Trigger: ACAGCAGCACAGGCTGAGGCAGCCTGCCGCCCTTCT...TCTGATGATAGATCTCTGCCTCAGTCTGTTGGCTGGCCTAATCCCCATGATGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114485.9 |
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| CDS-3UTR TCA 90 bp | TCAGGCCCCAATGATGGCCAGAGTGATCAGGCAGTTGGTGATTATTACAGGCCTGCGGCAGGCTGCCTCTaGATGAAACAGAAGGATGAG | + |
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Preference number: 4 (lower is better) Translates to: SGPNDGQSDQAVGDYYRPAAGCL*MKQKDE Trigger: CTCATCCTTCTGTTTCATTCAGAGGCAGCCTGCCGC...AGGCCTGTAATAATCACCAACTGCCTGATCACTCTGGCCATCATTGGGGCCTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114482.3 |
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| CDS-3UTR CCA 90 bp | TCTGGAATCATCATGGGGATTAGGCCAGCCAACAGACTGAGGCAGAGATCTATCCTGACTCAAAGCTGGTaGTGGGGCCTTTCTCAGAGC | + |
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Preference number: 4 (lower is better) Translates to: SGIIMGIRPANRLRQRSILTQSW*WGLSQS Trigger: GCTCTGAGAAAGGCCCCACCACCAGCTTTGAGTCAG...GATAGATCTCTGCCTCAGTCTGTTGGCTGGCCTAATCCCCATGATGATTCCAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000114482.3 ENSMUST00000114485.9 ENSMUST00000114487.9 |
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| CDS-3UTR TCA 90 bp | AGTTGTTCCTCAGGCCCCAATGATGGCCAGAGTGATCAGGCAGTTGGTGATTATCCTCCAGCTGGAGCTTaGTATCATCTCCAGACTTGG | + |
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Preference number: 4 (lower is better) Translates to: SCSSGPNDGQSDQAVGDYPPAGA*YHLQTW Trigger: CCAAGTCTGGAGATGATATCAAGCTCCAGCTGGAGG...ATAATCACCAACTGCCTGATCACTCTGGCCATCATTGGGGCCTGAGGAACAACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000114482.3 ENSMUST00000114485.9 ENSMUST00000114487.9 |
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| CDS-3UTR TCA 90 bp | GAACTCTTCTGTCTCCTTCTACTGTACATACACCCTGCAAAAGTTGTTCCTCAGTCCTGGACAGGCAGCTaGCTCAAAGCTGGTGGTGGG | + |
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Preference number: 4 (lower is better) Translates to: ELFCLLLLYIHPAKVVPQSWTGS*LKAGGG Trigger: CCCACCACCAGCTTTGAGTCAGCTGCCTGTCCAGGA...CTGAGGAACAACTTTTGCAGGGTGTATGTACAGTAGAAGGAGACAGAAGAGTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000114482.3 ENSMUST00000114485.9 ENSMUST00000114487.9 |
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| CDS-3UTR TCA 90 bp | ATCATGGGGATTAGGCCAGCCAACAGACTGAGGCAGAGATCTATCATCAGAACTCCTCCAGCTGGAGCTTaGTATCATCTCCAGACTTGG | + |
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Preference number: 4 (lower is better) Translates to: IMGIRPANRLRQRSIIRTPPAGA*YHLQTW Trigger: CCAAGTCTGGAGATGATATCAAGCTCCAGCTGGAGG...AGTTCTGATGATAGATCTCTGCCTCAGTCTGTTGGCTGGCCTAATCCCCATGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000114482.3 ENSMUST00000114485.9 ENSMUST00000114487.9 |
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| CDS-3UTR GCA 90 bp | CAGGCCCCAATGATGGCCAGAGTGATCAGGCAGTTGGTGATTATTACAGGCCTCCAGATTCTGAAGGCTTaGATCTTGCAGGGTCTTTTC | + |
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Preference number: 4 (lower is better) Translates to: QAPMMARVIRQLVIITGLQILKA*ILQGLF Trigger: GAAAAGACCCTGCAAGATGCAAGCCTTCAGAATCTG...GAGGCCTGTAATAATCACCAACTGCCTGATCACTCTGGCCATCATTGGGGCCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000114482.3 ENSMUST00000114485.9 ENSMUST00000114487.9 |
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| CDS-3UTR CCA 90 bp | TGGGGCATATTGTCAAGTGACTTGATTGGTCTGGACTGTGGAAGTGCAGAACAACTGACTCAAAGCTGGTaGTGGGGCCTTTCTCAGAGC | + |
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Preference number: 4 (lower is better) Translates to: WGILSSDLIGLDCGSAEQLTQSW*WGLSQS Trigger: GCTCTGAGAAAGGCCCCACCACCAGCTTTGAGTCAG...TTGTTCTGCACTTCCACAGTCCAGACCAATCAAGTCACTTGACAATATGCCCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000114482.3 ENSMUST00000114487.9 |
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| CDS-3UTR TCA 90 bp | TGTTCCTCAGGCCCCAATGATGGCCAGAGTGATCAGGCAGTTGGTGATTATTACGTAAGTACCCAGCAATaGGCTGGTTGTTTCTCAGGT | + |
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Preference number: 4 (lower is better) Translates to: CSSGPNDGQSDQAVGDYYVSTQQ*AGCFSG Trigger: ACCTGAGAAACAACCAGCTCATTGCTGGGTACTTAC...GTAATAATCACCAACTGCCTGATCACTCTGGCCATCATTGGGGCCTGAGGAACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000114482.3 ENSMUST00000114485.9 ENSMUST00000114487.9 |
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| CDS-3UTR TCA 90 bp | AAAAGTTGTTCCTCAGGCCCCAATGATGGCCAGAGTGATCAGGCAGTTGGTGATGTAAGTACCCAGCAATaGGCTGGTTGTTTCTCAGGT | + |
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Preference number: 4 (lower is better) Translates to: KSCSSGPNDGQSDQAVGDVSTQQ*AGCFSG Trigger: ACCTGAGAAACAACCAGCTCATTGCTGGGTACTTAC...ATCACCAACTGCCTGATCACTCTGGCCATCATTGGGGCCTGAGGAACAACTTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000114482.3 ENSMUST00000114485.9 ENSMUST00000114487.9 |
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| CDS-3UTR CCA 90 bp | GAACTCTTCTGTCTCCTTCTACTGTACATACACCCTGCAAAAGTTGTTCCTCAGACTCAAAGCTGGTGGTaGGGCCTTTCTCAGAGCGGA | + |
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Preference number: 4 (lower is better) Translates to: ELFCLLLLYIHPAKVVPQTQSWW*GLSQSG Trigger: TCCGCTCTGAGAAAGGCCCCACCACCAGCTTTGAGT...CTGAGGAACAACTTTTGCAGGGTGTATGTACAGTAGAAGGAGACAGAAGAGTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000114482.3 ENSMUST00000114485.9 ENSMUST00000114487.9 |
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| CDS-3UTR CCA 90 bp | GAACTCTTCTGTCTCCTTCTACTGTACATACACCCTGCAAAAGTTGTTCCTCAGCTGACTCAAAGCTGGTaGTGGGGCCTTTCTCAGAGC | + |
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Preference number: 4 (lower is better) Translates to: ELFCLLLLYIHPAKVVPQLTQSW*WGLSQS Trigger: GCTCTGAGAAAGGCCCCACCACCAGCTTTGAGTCAG...CTGAGGAACAACTTTTGCAGGGTGTATGTACAGTAGAAGGAGACAGAAGAGTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000114482.3 ENSMUST00000114485.9 ENSMUST00000114487.9 |
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| CDS-3UTR CCA 90 bp | AACTCTTCTGTCTCCTTCTACTGTACATACACCCTGCAAAAGTTGTTCCTCAGGCAGCTGACTCAAAGCTaGTGGTGGGGCCTTTCTCAG | + |
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Preference number: 4 (lower is better) Translates to: NSSVSFYCTYTLQKLFLRQLTQS*WWGLSQ Trigger: CTGAGAAAGGCCCCACCACCAGCTTTGAGTCAGCTG...CCTGAGGAACAACTTTTGCAGGGTGTATGTACAGTAGAAGGAGACAGAAGAGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000114482.3 ENSMUST00000114485.9 ENSMUST00000114487.9 |
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| 3UTR CAA 72 bp | GGTAAGGGAGTCACTTGGGGCATATTGTCAAGTGACTaGATTGGTCTGGACTGTGGAAGTGCAGAACAATGG | + |
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Preference number: 4 (lower is better) Translates to: GKGVTWGILSSD*IGLDCGSAEQW Trigger: CCATTGTTCTGCACTTCCACAGTCCAGACCAATCAAGTCACTTGACAATATGCCCCAAGTGACTCCCTTACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114482.3 ENSMUST00000114487.9 |
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| 3UTR CAA 72 bp | GGTTGGGTGGAGCCGTCTGTGGCTCATTTGCTATCTTaGTCATTGTGTGGCATTGAGTGCAGATCTGATACT | + |
|
Preference number: 4 (lower is better) Translates to: GWVEPSVAHLLS*SLCGIECRSDT Trigger: AGTATCAGATCTGCACTCAATGCCACACAATGACAAAGATAGCAAATGAGCCACAGACGGCTCCACCCAACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114487.9 |
||
| 3UTR CAA 72 bp | CATCTATTGGGTTGGGTGGAGCCGTCTGTGGCTCATTaGCTATCTTTGTCATTGTGTGGCATTGAGTGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: HLLGWVEPSVAH*LSLSLCGIECR Trigger: TCTGCACTCAATGCCACACAATGACAAAGATAGCAAATGAGCCACAGACGGCTCCACCCAACCCAATAGATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114487.9 |
||
| CDS-3UTR TCA 90 bp | ATCATGGGGATTAGGCCAGCCAACAGACTGAGGCAGAGATCTATCATCAGAACTCCCAAGAACACACTATaGAGGTCAATAGGCACCATG | + |
|
Preference number: 4 (lower is better) Translates to: IMGIRPANRLRQRSIIRTPKNTL*RSIGTM Trigger: CATGGTGCCTATTGACCTTCATAGTGTGTTCTTGGG...AGTTCTGATGATAGATCTCTGCCTCAGTCTGTTGGCTGGCCTAATCCCCATGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000114482.3 ENSMUST00000114485.9 ENSMUST00000114487.9 |
||
| CDS-3UTR CCA 90 bp | ATCATCATGGGGATTAGGCCAGCCAACAGACTGAGGCAGAGATCTATCATCAGATATCATCTCCAGACTTaGCACAAGACAGGCACAGCT | + |
|
Preference number: 4 (lower is better) Translates to: IIMGIRPANRLRQRSIIRYHLQT*HKTGTA Trigger: AGCTGTGCCTGTCTTGTGCCAAGTCTGGAGATGATA...TCTGATGATAGATCTCTGCCTCAGTCTGTTGGCTGGCCTAATCCCCATGATGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000114482.3 ENSMUST00000114485.9 ENSMUST00000114487.9 |
||
| CDS-3UTR CCA 90 bp | TTCTCCATAGACAGGCACAGGTTTATAAAACAGGGTAAGGGAGTCACTTGGGGCTATCATCTCCAGACTTaGCACAAGACAGGCACAGCT | + |
|
Preference number: 4 (lower is better) Translates to: FSIDRHRFIKQGKGVTWGYHLQT*HKTGTA Trigger: AGCTGTGCCTGTCTTGTGCCAAGTCTGGAGATGATA...GCCCCAAGTGACTCCCTTACCCTGTTTTATAAACCTGTGCCTGTCTATGGAGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000114482.3 ENSMUST00000114487.9 |
||
| CDS-3UTR CCA 90 bp | ATCAGAACTCTTCTGTCTCCTTCTACTGTACATACACCCTGCAAAAGTTGTTCCACTCAAAGCTGGTGGTaGGGCCTTTCTCAGAGCGGA | + |
|
Preference number: 4 (lower is better) Translates to: IRTLLSPSTVHTPCKSCSTQSWW*GLSQSG Trigger: TCCGCTCTGAGAAAGGCCCCACCACCAGCTTTGAGT...GGAACAACTTTTGCAGGGTGTATGTACAGTAGAAGGAGACAGAAGAGTTCTGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000114482.3 ENSMUST00000114485.9 ENSMUST00000114487.9 |
||
| CDS-3UTR CCA 90 bp | ATCAGAACTCTTCTGTCTCCTTCTACTGTACATACACCCTGCAAAAGTTGTTCCCAGCTGACTCAAAGCTaGTGGTGGGGCCTTTCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: IRTLLSPSTVHTPCKSCSQLTQS*WWGLSQ Trigger: CTGAGAAAGGCCCCACCACCAGCTTTGAGTCAGCTG...GGAACAACTTTTGCAGGGTGTATGTACAGTAGAAGGAGACAGAAGAGTTCTGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000114482.3 ENSMUST00000114485.9 ENSMUST00000114487.9 |
||
| CDS-3UTR TCA 90 bp | ACCATTTCACAAATGCAGGAGCATCTAATCCCCAGCTCCTCTCAGAAAGGACATGTAAGTACCCAGCAATaGGCTGGTTGTTTCTCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: TISQMQEHLIPSSSQKGHVSTQQ*AGCFSG Trigger: ACCTGAGAAACAACCAGCTCATTGCTGGGTACTTAC...ATGTCCTTTCTGAGAGGAGCTGGGGATTAGATGCTCCTGCATTTGTGAAATGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114482.3 ENSMUST00000114487.9 |
||
| CDS-3UTR TCA 90 bp | ATCAGAACTCTTCTGTCTCCTTCTACTGTACATACACCCTGCAAAAGTTGTTCCCCTCCAGCTGGAGCTTaGTATCATCTCCAGACTTGG | + |
|
Preference number: 4 (lower is better) Translates to: IRTLLSPSTVHTPCKSCSPPAGA*YHLQTW Trigger: CCAAGTCTGGAGATGATATCAAGCTCCAGCTGGAGG...GGAACAACTTTTGCAGGGTGTATGTACAGTAGAAGGAGACAGAAGAGTTCTGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000114482.3 ENSMUST00000114485.9 ENSMUST00000114487.9 |
||
| CDS-3UTR GCA 90 bp | ATCATCATGGGGATTAGGCCAGCCAACAGACTGAGGCAGAGATCTATCATCAGACAGATTCTGAAGGCTTaGATCTTGCAGGGTCTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: IIMGIRPANRLRQRSIIRQILKA*ILQGLF Trigger: GAAAAGACCCTGCAAGATGCAAGCCTTCAGAATCTG...TCTGATGATAGATCTCTGCCTCAGTCTGTTGGCTGGCCTAATCCCCATGATGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000114482.3 ENSMUST00000114485.9 ENSMUST00000114487.9 |
||
| CDS-3UTR CCA 90 bp | ACCATTTCACAAATGCAGGAGCATCTAATCCCCAGCTCCTCTCAGAAAGGACATTATCATCTCCAGACTTaGCACAAGACAGGCACAGCT | + |
|
Preference number: 4 (lower is better) Translates to: TISQMQEHLIPSSSQKGHYHLQT*HKTGTA Trigger: AGCTGTGCCTGTCTTGTGCCAAGTCTGGAGATGATA...ATGTCCTTTCTGAGAGGAGCTGGGGATTAGATGCTCCTGCATTTGTGAAATGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114482.3 ENSMUST00000114487.9 |
||
| 3UTR CAA 72 bp | GTGGAGCCGTCTGTGGCTCATTTGCTATCTTTGTCATaGTGTGGCATTGAGTGCAGATCTGATACTTGCATG | + |
|
Preference number: 4 (lower is better) Translates to: VEPSVAHLLSLS*CGIECRSDTCM Trigger: CATGCAAGTATCAGATCTGCACTCAATGCCACACAATGACAAAGATAGCAAATGAGCCACAGACGGCTCCAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114487.9 |
||
| CDS-3UTR TCA 90 bp | ATCAGAACTCTTCTGTCTCCTTCTACTGTACATACACCCTGCAAAAGTTGTTCCCAGGCTGCCTCTGAATaGAACAGAAGGATGAGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: IRTLLSPSTVHTPCKSCSQAASE*NRRMRR Trigger: CCTTCTCATCCTTCTGTTTCATTCAGAGGCAGCCTG...GGAACAACTTTTGCAGGGTGTATGTACAGTAGAAGGAGACAGAAGAGTTCTGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114482.3 |
||
| CDS-3UTR GCA 90 bp | AACCATTTCACAAATGCAGGAGCATCTAATCCCCAGCTCCTCTCAGAAAGGACACAGATTCTGAAGGCTTaGATCTTGCAGGGTCTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: NHFTNAGASNPQLLSERTQILKA*ILQGLF Trigger: GAAAAGACCCTGCAAGATGCAAGCCTTCAGAATCTG...TGTCCTTTCTGAGAGGAGCTGGGGATTAGATGCTCCTGCATTTGTGAAATGGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000114482.3 ENSMUST00000114487.9 |
||
| CDS-3UTR CCA 90 bp | TTGATATTCTGTTACCCAGAAATGAGGAAGAAGACTTTCAGAGAGGAGGTAACTCAGCTGACTCAAAGCTaGTGGTGGGGCCTTTCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: LIFCYPEMRKKTFREEVTQLTQS*WWGLSQ Trigger: CTGAGAAAGGCCCCACCACCAGCTTTGAGTCAGCTG...AGTTACCTCCTCTCTGAAAGTCTTCTTCCTCATTTCTGGGTAACAGAATATCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114487.9 |
||
| CDS-3UTR TCA 90 bp | AGAACTCTTCTGTCTCCTTCTACTGTACATACACCCTGCAAAAGTTGTTCCTCACCCAAGAACACACTATaGAGGTCAATAGGCACCATG | + |
|
Preference number: 4 (lower is better) Translates to: RTLLSPSTVHTPCKSCSSPKNTL*RSIGTM Trigger: CATGGTGCCTATTGACCTTCATAGTGTGTTCTTGGG...TGAGGAACAACTTTTGCAGGGTGTATGTACAGTAGAAGGAGACAGAAGAGTTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000114482.3 ENSMUST00000114485.9 ENSMUST00000114487.9 |
||
| 3UTR CAA 72 bp | TTGAGCTTTAGTGATTTTGAACCAAGTGTTCATCTATaGGGTTGGGTGGAGCCGTCTGTGGCTCATTTGCTA | + |
|
Preference number: 4 (lower is better) Translates to: LSFSDFEPSVHL*GWVEPSVAHLL Trigger: TAGCAAATGAGCCACAGACGGCTCCACCCAACCCAATAGATGAACACTTGGTTCAAAATCACTAAAGCTCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114487.9 |
||
| 3UTR CAA 72 bp | TTTATAAAACAGGGTAAGGGAGTCACTTGGGGCATATaGTCAAGTGACTTGATTGGTCTGGACTGTGGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: FIKQGKGVTWGI*SSDLIGLDCGS Trigger: ACTTCCACAGTCCAGACCAATCAAGTCACTTGACAATATGCCCCAAGTGACTCCCTTACCCTGTTTTATAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000114482.3 ENSMUST00000114487.9 |
||
| 3UTR CAA 72 bp | TTATTCATCCATGATAGGTATTTGGGTTGTTTTTACTaGGTGGGTTCATGGTGGACAACACTACTTTATAAC | + |
|
Preference number: 4 (lower is better) Translates to: LFIHDRYLGCFY*VGSWWTTLLYN Trigger: GTTATAAAGTAGTGTTGTCCACCATGAACCCACCAAGTAAAAACAACCCAAATACCTATCATGGATGAATAA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000114487.9 |
||
| CDS-3UTR CAA 90 bp | ATCATGGGGATTAGGCCAGCCAACAGACTGAGGCAGAGATCTATCATCAGAACTCAAGACAGGCACAGCTaGCCCCCGTGGATGCCCAAG | + |
|
Preference number: 5 (lower is better) Translates to: IMGIRPANRLRQRSIIRTQDRHS*PPWMPK Trigger: CTTGGGCATCCACGGGGGCAAGCTGTGCCTGTCTTG...AGTTCTGATGATAGATCTCTGCCTCAGTCTGTTGGCTGGCCTAATCCCCATGAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000114482.3 ENSMUST00000114485.9 ENSMUST00000114487.9 |
||
| CDS-3UTR CAA 90 bp | AACCATTTCACAAATGCAGGAGCATCTAATCCCCAGCTCCTCTCAGAAAGGACACAAGACAGGCACAGCTaGCCCCCGTGGATGCCCAAG | + |
|
Preference number: 5 (lower is better) Translates to: NHFTNAGASNPQLLSERTQDRHS*PPWMPK Trigger: CTTGGGCATCCACGGGGGCAAGCTGTGCCTGTCTTG...TGTCCTTTCTGAGAGGAGCTGGGGATTAGATGCTCCTGCATTTGTGAAATGGTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000114482.3 ENSMUST00000114487.9 |
||
| CDS-3UTR CAA 90 bp | CCACAGGGTCACAGGATTCAGTGGAACATTTGTTTTCCCCCTTTGTTGAGTATTCAAGACAGGCACAGCTaGCCCCCGTGGATGCCCAAG | + |
|
Preference number: 5 (lower is better) Translates to: PQGHRIQWNICFPPLLSIQDRHS*PPWMPK Trigger: CTTGGGCATCCACGGGGGCAAGCTGTGCCTGTCTTG...AATACTCAACAAAGGGGGAAAACAAATGTTCCACTGAATCCTGTGACCCTGTGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000114487.9 |
||
| CDS-3UTR CAA 90 bp | TGTTCCTCAGGCCCCAATGATGGCCAGAGTGATCAGGCAGTTGGTGATTATTACCTGAAGGCTTGCATCTaGCAGGGTCTTTTCCCAGAA | + |
|
Preference number: 5 (lower is better) Translates to: CSSGPNDGQSDQAVGDYYLKACI*QGLFPE Trigger: TTCTGGGAAAAGACCCTGCAAGATGCAAGCCTTCAG...GTAATAATCACCAACTGCCTGATCACTCTGGCCATCATTGGGGCCTGAGGAACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000114482.3 ENSMUST00000114485.9 ENSMUST00000114487.9 |
||
| CDS-3UTR CAA 90 bp | TCAGGCCCCAATGATGGCCAGAGTGATCAGGCAGTTGGTGATTATTACAGGCCTCCAGATTCTGAAGGCTaGCATCTTGCAGGGTCTTTT | + |
|
Preference number: 5 (lower is better) Translates to: SGPNDGQSDQAVGDYYRPPDSEG*HLAGSF Trigger: AAAAGACCCTGCAAGATGCAAGCCTTCAGAATCTGG...AGGCCTGTAATAATCACCAACTGCCTGATCACTCTGGCCATCATTGGGGCCTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000114482.3 ENSMUST00000114485.9 ENSMUST00000114487.9 |
||
| CDS-3UTR CAA 90 bp | AGTTGTTCCTCAGGCCCCAATGATGGCCAGAGTGATCAGGCAGTTGGTGATTATTCCTCCAGCTGGAGCTaGATATCATCTCCAGACTTG | + |
|
Preference number: 5 (lower is better) Translates to: SCSSGPNDGQSDQAVGDYSSSWS*ISSPDL Trigger: CAAGTCTGGAGATGATATCAAGCTCCAGCTGGAGGA...ATAATCACCAACTGCCTGATCACTCTGGCCATCATTGGGGCCTGAGGAACAACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000114482.3 ENSMUST00000114485.9 ENSMUST00000114487.9 |
||
| CDS-3UTR CAA 90 bp | GTTCCTCAGGCCCCAATGATGGCCAGAGTGATCAGGCAGTTGGTGATTATTACATCCTCCAGCTGGAGCTaGATATCATCTCCAGACTTG | + |
|
Preference number: 5 (lower is better) Translates to: VPQAPMMARVIRQLVIITSSSWS*ISSPDL Trigger: CAAGTCTGGAGATGATATCAAGCTCCAGCTGGAGGA...TGTAATAATCACCAACTGCCTGATCACTCTGGCCATCATTGGGGCCTGAGGAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000114482.3 ENSMUST00000114485.9 ENSMUST00000114487.9 |
||
| CDS-3UTR CAA 90 bp | TCTGGAATCATCATGGGGATTAGGCCAGCCAACAGACTGAGGCAGAGATCTATCTCCTCCAGCTGGAGCTaGATATCATCTCCAGACTTG | + |
|
Preference number: 5 (lower is better) Translates to: SGIIMGIRPANRLRQRSISSSWS*ISSPDL Trigger: CAAGTCTGGAGATGATATCAAGCTCCAGCTGGAGGA...GATAGATCTCTGCCTCAGTCTGTTGGCTGGCCTAATCCCCATGATGATTCCAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000114482.3 ENSMUST00000114485.9 ENSMUST00000114487.9 |
||
| CDS-3UTR CAA 90 bp | ATCATCATGGGGATTAGGCCAGCCAACAGACTGAGGCAGAGATCTATCATCAGACTGAAGGCTTGCATCTaGCAGGGTCTTTTCCCAGAA | + |
|
Preference number: 5 (lower is better) Translates to: IIMGIRPANRLRQRSIIRLKACI*QGLFPE Trigger: TTCTGGGAAAAGACCCTGCAAGATGCAAGCCTTCAG...TCTGATGATAGATCTCTGCCTCAGTCTGTTGGCTGGCCTAATCCCCATGATGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000114482.3 ENSMUST00000114485.9 ENSMUST00000114487.9 |
||
| CDS-3UTR CAA 90 bp | ATCATCATGGGGATTAGGCCAGCCAACAGACTGAGGCAGAGATCTATCATCAGACCAGATTCTGAAGGCTaGCATCTTGCAGGGTCTTTT | + |
|
Preference number: 5 (lower is better) Translates to: IIMGIRPANRLRQRSIIRPDSEG*HLAGSF Trigger: AAAAGACCCTGCAAGATGCAAGCCTTCAGAATCTGG...TCTGATGATAGATCTCTGCCTCAGTCTGTTGGCTGGCCTAATCCCCATGATGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000114482.3 ENSMUST00000114485.9 ENSMUST00000114487.9 |
||
| CDS CCA 90 bp | TCTTCTTTGTTCTTGCTCAGATCAGTGATGTTAACTTCCTCCAGCTaGAGCTTGATATCATCTCCAGACTTGGCACAAGACAGGCACAGC | + |
|
Preference number: 5 (lower is better) Translates to: SSLFLLRSVMLTSSS*SLISSPDLAQDRHS Trigger: GCTGTGCCTGTCTTGTGCCAAGTCTGGAGATGATATCAAGCTCCAGCTGGAGGAAGTTAACATCACTGATCTGAGCAAGAACAAAGAAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000114482.3 ENSMUST00000114485.9 ENSMUST00000114487.9 |
||
| CDS-3UTR CAA 90 bp | CATCAGAACTCTTCTGTCTCCTTCTACTGTACATACACCCTGCAAAAGTTGTTCCTGAAGGCTTGCATCTaGCAGGGTCTTTTCCCAGAA | + |
|
Preference number: 5 (lower is better) Translates to: HQNSSVSFYCTYTLQKLFLKACI*QGLFPE Trigger: TTCTGGGAAAAGACCCTGCAAGATGCAAGCCTTCAG...GAACAACTTTTGCAGGGTGTATGTACAGTAGAAGGAGACAGAAGAGTTCTGATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000114482.3 ENSMUST00000114485.9 ENSMUST00000114487.9 |
||
| CDS-3UTR CAA 90 bp | TGCAAAAGTTGTTCCTCAGGCCCCAATGATGGCCAGAGTGATCAGGCAGTTGGTTCTTCTTCTTTGTTCTaGCTCAGATCAGTGATGTTA | + |
|
Preference number: 5 (lower is better) Translates to: CKSCSSGPNDGQSDQAVGSSSLF*LRSVML Trigger: TAACATCACTGATCTGAGCAAGAACAAAGAAGAAGA...ACCAACTGCCTGATCACTCTGGCCATCATTGGGGCCTGAGGAACAACTTTTGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000114482.3 ENSMUST00000114485.9 ENSMUST00000114487.9 |
||
| CDS-3UTR CAA 90 bp | AGTTGTTCCTCAGGCCCCAATGATGGCCAGAGTGATCAGGCAGTTGGTGATTATATGAAGGTAAAGCGCTaGTCTTCTTCTTTGTTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: SCSSGPNDGQSDQAVGDYMKVKR*SSSLFL Trigger: CAAGAACAAAGAAGAAGACAAGCGCTTTACCTTCAT...ATAATCACCAACTGCCTGATCACTCTGGCCATCATTGGGGCCTGAGGAACAACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000114482.3 ENSMUST00000114485.9 ENSMUST00000114487.9 |
||
| CDS-3UTR CAA 90 bp | ATCATCATGGGGATTAGGCCAGCCAACAGACTGAGGCAGAGATCTATCATCAGATCTTCTTCTTTGTTCTaGCTCAGATCAGTGATGTTA | + |
|
Preference number: 5 (lower is better) Translates to: IIMGIRPANRLRQRSIIRSSSLF*LRSVML Trigger: TAACATCACTGATCTGAGCAAGAACAAAGAAGAAGA...TCTGATGATAGATCTCTGCCTCAGTCTGTTGGCTGGCCTAATCCCCATGATGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000114482.3 ENSMUST00000114485.9 ENSMUST00000114487.9 |
||
| CDS-3UTR CAA 90 bp | AGAACTCTTCTGTCTCCTTCTACTGTACATACACCCTGCAAAAGTTGTTCCTCACGCTTGTCTTCTTCTTaGTTCTTGCTCAGATCAGTG | + |
|
Preference number: 5 (lower is better) Translates to: RTLLSPSTVHTPCKSCSSRLSSS*FLLRSV Trigger: CACTGATCTGAGCAAGAACAAAGAAGAAGACAAGCG...TGAGGAACAACTTTTGCAGGGTGTATGTACAGTAGAAGGAGACAGAAGAGTTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000114482.3 ENSMUST00000114485.9 ENSMUST00000114487.9 |
||
| CDS-3UTR CAA 90 bp | GAACTCTTCTGTCTCCTTCTACTGTACATACACCCTGCAAAAGTTGTTCCTCAGATGAAGGTAAAGCGCTaGTCTTCTTCTTTGTTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: ELFCLLLLYIHPAKVVPQMKVKR*SSSLFL Trigger: CAAGAACAAAGAAGAAGACAAGCGCTTTACCTTCAT...CTGAGGAACAACTTTTGCAGGGTGTATGTACAGTAGAAGGAGACAGAAGAGTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000114482.3 ENSMUST00000114485.9 ENSMUST00000114487.9 |
||
| CDS-3UTR CAA 90 bp | GTAGAGCACATGCTTAGTATATGTGATGCCCTGGTGGTTTCATCAAAAAGCCCAATGAAGGTAAAGCGCTaGTCTTCTTCTTTGTTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: VEHMLSICDALVVSSKSPMKVKR*SSSLFL Trigger: CAAGAACAAAGAAGAAGACAAGCGCTTTACCTTCAT...TGGGCTTTTTGATGAAACCACCAGGGCATCACATATACTAAGCATGTGCTCTAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000114482.3 ENSMUST00000114487.9 |
||
| CDS-3UTR CAA 90 bp | TATTCATCCATGATAGGTATTTGGGTTGTTTTTACTTGGTGGGTTCATGGTGGATCTTCTTCTTTGTTCTaGCTCAGATCAGTGATGTTA | + |
|
Preference number: 5 (lower is better) Translates to: YSSMIGIWVVFTWWVHGGSSSLF*LRSVML Trigger: TAACATCACTGATCTGAGCAAGAACAAAGAAGAAGA...TCCACCATGAACCCACCAAGTAAAAACAACCCAAATACCTATCATGGATGAATA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000114487.9 |
||
| CDS CAA 72 bp | ACTTCCTCCAGCTGGAGCTTGATATCATCTCCAGACTaGGCACAAGACAGGCACAGCTTGCCCCCGTGGATG | + |
|
Preference number: 6 (lower is better) Translates to: TSSSWSLISSPD*AQDRHSLPPWM Trigger: CATCCACGGGGGCAAGCTGTGCCTGTCTTGTGCCAAGTCTGGAGATGATATCAAGCTCCAGCTGGAGGAAGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000114482.3 ENSMUST00000114485.9 ENSMUST00000114487.9 |
||
| CDS CAA 72 bp | TTCTGGTTAGTATCCCAGATTCTGAAGGCTTGCATCTaGCAGGGTCTTTTCCCAGAAGGGCGGCAGGCTGCC | + |
|
Preference number: 6 (lower is better) Translates to: FWLVSQILKACI*QGLFPEGRQAA Trigger: GGCAGCCTGCCGCCCTTCTGGGAAAAGACCCTGCAAGATGCAAGCCTTCAGAATCTGGGATACTAACCAGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000114482.3 ENSMUST00000114485.9 ENSMUST00000114487.9 ENSMUST00000142093.7 |
||
| CDS CAA 90 bp | GTGATGTTAACTTCCTCCAGCTGGAGCTTGATATCATCTCCAGACTaGGCACAAGACAGGCACAGCTTGCCCCCGTGGATGCCCAAGAAC | + |
|
Preference number: 6 (lower is better) Translates to: VMLTSSSWSLISSPD*AQDRHSLPPWMPKN Trigger: GTTCTTGGGCATCCACGGGGGCAAGCTGTGCCTGTCTTGTGCCAAGTCTGGAGATGATATCAAGCTCCAGCTGGAGGAAGTTAACATCAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000114482.3 ENSMUST00000114485.9 ENSMUST00000114487.9 |
||
| CDS GCA 72 bp | TATCATCTCCAGACTTGGCACAAGACAGGCACAGCTTaGCCCCGTGGATGCCCAAGAACACACTATGAAGGT | + |
|
Preference number: 6 (lower is better) Translates to: YHLQTWHKTGTA*PRGCPRTHYEG Trigger: ACCTTCATAGTGTGTTCTTGGGCATCCACGGGGGCAAGCTGTGCCTGTCTTGTGCCAAGTCTGGAGATGATA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000114482.3 ENSMUST00000114485.9 ENSMUST00000114487.9 |
||
| CDS CAA 90 bp | TCTCAGGTAAAAGGTCTTCTGGTTAGTATCCCAGATTCTGAAGGCTaGCATCTTGCAGGGTCTTTTCCCAGAAGGGCGGCAGGCTGCCTC | + |
|
Preference number: 6 (lower is better) Translates to: SQVKGLLVSIPDSEG*HLAGSFPRRAAGCL Trigger: GAGGCAGCCTGCCGCCCTTCTGGGAAAAGACCCTGCAAGATGCAAGCCTTCAGAATCTGGGATACTAACCAGAAGACCTTTTACCTGAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000114482.3 ENSMUST00000114485.9 ENSMUST00000114487.9 ENSMUST00000142093.7 |
||
| CDS GCA 72 bp | AAGGTCTTCTGGTTAGTATCCCAGATTCTGAAGGCTTaGATCTTGCAGGGTCTTTTCCCAGAAGGGCGGCAG | + |
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Preference number: 6 (lower is better) Translates to: KVFWLVSQILKA*ILQGLFPEGRQ Trigger: CTGCCGCCCTTCTGGGAAAAGACCCTGCAAGATGCAAGCCTTCAGAATCTGGGATACTAACCAGAAGACCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000114482.3 ENSMUST00000114485.9 ENSMUST00000114487.9 ENSMUST00000142093.7 |
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| CDS CAA 90 bp | GGGCCTTTCTCAGAGCGGATGAAGGTAAAGCGCTTGTCTTCTTCTTaGTTCTTGCTCAGATCAGTGATGTTAACTTCCTCCAGCTGGAGC | + |
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Preference number: 6 (lower is better) Translates to: GPFSERMKVKRLSSS*FLLRSVMLTSSSWS Trigger: GCTCCAGCTGGAGGAAGTTAACATCACTGATCTGAGCAAGAACAAAGAAGAAGACAAGCGCTTTACCTTCATCCGCTCTGAGAAAGGCCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000114482.3 ENSMUST00000114485.9 ENSMUST00000114487.9 |
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| CDS CAA 72 bp | CTCAGATCAGTGATGTTAACTTCCTCCAGCTGGAGCTaGATATCATCTCCAGACTTGGCACAAGACAGGCAC | + |
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Preference number: 6 (lower is better) Translates to: LRSVMLTSSSWS*ISSPDLAQDRH Trigger: GTGCCTGTCTTGTGCCAAGTCTGGAGATGATATCAAGCTCCAGCTGGAGGAAGTTAACATCACTGATCTGAG 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000114482.3 ENSMUST00000114485.9 ENSMUST00000114487.9 |
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| CDS CAA 72 bp | GTGGGGCCTTTCTCAGAGCGGATGAAGGTAAAGCGCTaGTCTTCTTCTTTGTTCTTGCTCAGATCAGTGATG | + |
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Preference number: 6 (lower is better) Translates to: VGPFSERMKVKR*SSSLFLLRSVM Trigger: CATCACTGATCTGAGCAAGAACAAAGAAGAAGACAAGCGCTTTACCTTCATCCGCTCTGAGAAAGGCCCCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000114482.3 ENSMUST00000114485.9 ENSMUST00000114487.9 |
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| CDS CAA 90 bp | AAGCTGGTGGTGGGGCCTTTCTCAGAGCGGATGAAGGTAAAGCGCTaGTCTTCTTCTTTGTTCTTGCTCAGATCAGTGATGTTAACTTCC | + |
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Preference number: 6 (lower is better) Translates to: KLVVGPFSERMKVKR*SSSLFLLRSVMLTS Trigger: GGAAGTTAACATCACTGATCTGAGCAAGAACAAAGAAGAAGACAAGCGCTTTACCTTCATCCGCTCTGAGAAAGGCCCCACCACCAGCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000114482.3 ENSMUST00000114485.9 ENSMUST00000114487.9 |
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| CDS CCA 72 bp | TTCTTGCTCAGATCAGTGATGTTAACTTCCTCCAGCTaGAGCTTGATATCATCTCCAGACTTGGCACAAGAC | + |
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Preference number: 6 (lower is better) Translates to: FLLRSVMLTSSS*SLISSPDLAQD Trigger: GTCTTGTGCCAAGTCTGGAGATGATATCAAGCTCCAGCTGGAGGAAGTTAACATCACTGATCTGAGCAAGAA 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000114482.3 ENSMUST00000114485.9 ENSMUST00000114487.9 |
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| CDS CAA 72 bp | TCAGAGCGGATGAAGGTAAAGCGCTTGTCTTCTTCTTaGTTCTTGCTCAGATCAGTGATGTTAACTTCCTCC | + |
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Preference number: 6 (lower is better) Translates to: SERMKVKRLSSS*FLLRSVMLTSS Trigger: GGAGGAAGTTAACATCACTGATCTGAGCAAGAACAAAGAAGAAGACAAGCGCTTTACCTTCATCCGCTCTGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000114482.3 ENSMUST00000114485.9 ENSMUST00000114487.9 |
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