Pregenerated sensors for IL1RL2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000070942Ensembl transcript IDs: ENSMUST00000095020.9, ENSMUST00000193388.2, ENSMUST00000194296.6
Found 128 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GGTTTGGGGGACGTGGAAGTCAACCCTGTGAAGGAAAAAGTGGGATaGAGAGCGAGGCACCACAGGCTCCCGCAGCTCCTTGAAGAGTCA | + |
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Preference number: 1 (lower is better) Translates to: GLGDVEVNPVKEKVG*RARHHRLPQLLEES Trigger: TGACTCTTCAAGGAGCTGCGGGAGCCTGTGGTGCCTCGCTCTCCATCCCACTTTTTCCTTCACAGGGTTGACTTCCACGTCCCCCAAACC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000194296.6 |
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| 3UTR TCA 90 bp | GATCAAGCATCCTGGACACCTGATCTGTCATCCTCAGTATCCCACTaGCACGGAGGCCCAACGTTAGAGCCACCCCATGCTTGGGGAGTA | + |
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Preference number: 1 (lower is better) Translates to: DQASWTPDLSSSVSH*HGGPTLEPPHAWGV Trigger: TACTCCCCAAGCATGGGGTGGCTCTAACGTTGGGCCTCCGTGTCAGTGGGATACTGAGGATGACAGATCAGGTGTCCAGGATGCTTGATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000194296.6 |
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| 3UTR GCA 90 bp | GGACCCTCGGTGAGCTCATCACGCTGTAGGCATGCAGAGAGTCTATaGTCCTCTCCGGATGCTCGTGAGGAGGGGGAGAAATTTAAAGAG | + |
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Preference number: 1 (lower is better) Translates to: GPSVSSSRCRHAESL*SSPDAREEGEKFKE Trigger: CTCTTTAAATTTCTCCCCCTCCTCACGAGCATCCGGAGAGGAGCATAGACTCTCTGCATGCCTACAGCGTGATGAGCTCACCGAGGGTCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000194296.6 |
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| 3UTR TCA 90 bp | TCCCATGGTGCAAAGAGAAACCGAAAAGCAAAACATACAAGCTTGTaGTTGAAGGGACCCTCGGTGAGCTCATCACGCTGTAGGCATGCA | + |
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Preference number: 1 (lower is better) Translates to: SHGAKRNRKAKHTSL*LKGPSVSSSRCRHA Trigger: TGCATGCCTACAGCGTGATGAGCTCACCGAGGGTCCCTTCAATCACAAGCTTGTATGTTTTGCTTTTCGGTTTCTCTTTGCACCATGGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000194296.6 |
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| 3UTR TCA 90 bp | CAAAGCCCATTCAGGGTGAGGAAGACAGAAGAAGGAACCAGTCAGTaGCGCCTTTGTACCCGAACCTTCAAATCCTCTGTAAGGAGTTAC | + |
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Preference number: 1 (lower is better) Translates to: QSPFRVRKTEEGTSQ*RLCTRTFKSSVRSY Trigger: GTAACTCCTTACAGAGGATTTGAAGGTTCGGGTACAAAGGCGTCACTGACTGGTTCCTTCTTCTGTCTTCCTCACCCTGAATGGGCTTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194296.6 |
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| 3UTR TCA 90 bp | GATTTAAGATGGCTCTGGTGCAAACCTGAGACAACAAAAAGAAACTaGGGTGGGGTAGTGGCTACGTCCTCCATCTTCACGGAAGTTCTG | + |
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Preference number: 1 (lower is better) Translates to: DLRWLWCKPETTKRN*GGVVATSSIFTEVL Trigger: CAGAACTTCCGTGAAGATGGAGGACGTAGCCACTACCCCACCTCAGTTTCTTTTTGTTGTCTCAGGTTTGCACCAGAGCCATCTTAAATC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000194296.6 |
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| 3UTR GCA 90 bp | TACCCGAACCTTCAAATCCTCTGTAAGGAGTTACAATTCCCATGGTaGAAAGAGAAACCGAAAAGCAAAACATACAAGCTTGTGATTGAA | + |
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Preference number: 1 (lower is better) Translates to: YPNLQILCKELQFPW*KEKPKSKTYKLVIE Trigger: TTCAATCACAAGCTTGTATGTTTTGCTTTTCGGTTTCTCTTTGCACCATGGGAATTGTAACTCCTTACAGAGGATTTGAAGGTTCGGGTA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000194296.6 |
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| 3UTR CCA 90 bp | TTGTACCCGAACCTTCAAATCCTCTGTAAGGAGTTACAATTCCCATaGTGCAAAGAGAAACCGAAAAGCAAAACATACAAGCTTGTGATT | + |
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Preference number: 1 (lower is better) Translates to: LYPNLQILCKELQFP*CKEKPKSKTYKLVI Trigger: AATCACAAGCTTGTATGTTTTGCTTTTCGGTTTCTCTTTGCACCATGGGAATTGTAACTCCTTACAGAGGATTTGAAGGTTCGGGTACAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000194296.6 |
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| 3UTR TCA 90 bp | TCAGGAGCCATGAAGCAAACAGGAGTAATAAGGATCAGCTATGACTaGAAGCATCCAGCAAACAATACAAATAAACAAAAAGCTACAAGG | + |
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Preference number: 1 (lower is better) Translates to: SGAMKQTGVIRISYD*KHPANNTNKQKATR Trigger: CCTTGTAGCTTTTTGTTTATTTGTATTGTTTGCTGGATGCTTTCAGTCATAGCTGATCCTTATTACTCCTGTTTGCTTCATGGCTCCTGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000194296.6 |
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| 3UTR-3UTR TCA 90 bp | GGACCCACTAGGCAGGCACTGTGTCCTGGGCTTCAAAGAAGAAAGGCCAGGCCCAGTTCTGACAGGGGATaGTGCTTCCCACCCCAATTC | + |
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Preference number: 2 (lower is better) Translates to: GPTRQALCPGLQRRKARPSSDRG*CFPPQF Trigger: GAATTGGGGTGGGAAGCATCATCCCCTGTCAGAACT...GGGCCTGGCCTTTCTTCTTTGAAGCCCAGGACACAGTGCCTGCCTAGTGGGTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000194296.6 |
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| 3UTR-3UTR CCA 90 bp | GGACCCACTAGGCAGGCACTGTGTCCTGGGCTTCAAAGAAGAAAGGCCAGGCCCCTAAGGCTATCTACTTaGTATCCTCAGACTGCCCAG | + |
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Preference number: 2 (lower is better) Translates to: GPTRQALCPGLQRRKARPLRLST*YPQTAQ Trigger: CTGGGCAGTCTGAGGATACCAAGTAGATAGCCTTAG...GGGCCTGGCCTTTCTTCTTTGAAGCCCAGGACACAGTGCCTGCCTAGTGGGTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194296.6 |
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| 3UTR-3UTR GCA 90 bp | AGGCACTGTGTCCTGGGCTTCAAAGAAGAAAGGCCAGGCCCCATTAGTCAGCCCTTGGTATCCTCAGACTaGCCAGCCTCCCATCTCAAA | + |
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Preference number: 2 (lower is better) Translates to: RHCVLGFKEERPGPISQPLVSSD*PASHLK Trigger: TTTGAGATGGGAGGCTGGGCAGTCTGAGGATACCAA...GGGCTGACTAATGGGGCCTGGCCTTTCTTCTTTGAAGCCCAGGACACAGTGCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194296.6 |
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| 3UTR-3UTR CCA 90 bp | AGGCACTGTGTCCTGGGCTTCAAAGAAGAAAGGCCAGGCCCCATTAGTCAGCCCGCTAATACCATGGTTTaGGGGACGTGGAAGTCAACC | + |
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Preference number: 2 (lower is better) Translates to: RHCVLGFKEERPGPISQPANTMV*GTWKST Trigger: GGTTGACTTCCACGTCCCCCAAACCATGGTATTAGC...GGGCTGACTAATGGGGCCTGGCCTTTCTTCTTTGAAGCCCAGGACACAGTGCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000194296.6 |
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| 3UTR-3UTR TCA 90 bp | AGGCACTGTGTCCTGGGCTTCAAAGAAGAAAGGCCAGGCCCCATTAGTCAGCCCAGGCTAATCAATGGATaGATCTCGAGAGCACTTGAG | + |
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Preference number: 2 (lower is better) Translates to: RHCVLGFKEERPGPISQPRLING*ISRALE Trigger: CTCAAGTGCTCTCGAGATTCATCCATTGATTAGCCT...GGGCTGACTAATGGGGCCTGGCCTTTCTTCTTTGAAGCCCAGGACACAGTGCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194296.6 |
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| 3UTR-3UTR TCA 90 bp | CTTCCCACCCCAATTCCTTTTGAGTTACCTCATCAGGCAGGGCTTTCATTGAGGAAAGAGCCAGCTACATaGGTAGACAATTCAGAGAGG | + |
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Preference number: 2 (lower is better) Translates to: LPTPIPFELPHQAGLSLRKEPAT*VDNSER Trigger: CCTCTCTGAATTGTCTACTCATGTAGCTGGCTCTTT...CCTCAATGAAAGCCCTGCCTGATGAGGTAACTCAAAAGGAATTGGGGTGGGAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000194296.6 |
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| 3UTR-3UTR TCA 90 bp | GGAAGACAGAAGAAGGAACCAGTCAGTGACGCCTTTGTACCCGAACCTTCAAATAAACATACAAGCTTGTaGTTGAAGGGACCCTCGGTG | + |
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Preference number: 2 (lower is better) Translates to: GRQKKEPVSDAFVPEPSNKHTSL*LKGPSV Trigger: CACCGAGGGTCCCTTCAATCACAAGCTTGTATGTTT...ATTTGAAGGTTCGGGTACAAAGGCGTCACTGACTGGTTCCTTCTTCTGTCTTCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194296.6 |
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| 3UTR-3UTR CCA 90 bp | CTTCCCACCCCAATTCCTTTTGAGTTACCTCATCAGGCAGGGCTTTCATTGAGGGAATCTTGTGGACCCTaGACAAACACAGACATTGCA | + |
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Preference number: 2 (lower is better) Translates to: LPTPIPFELPHQAGLSLRESCGP*TNTDIA Trigger: TGCAATGTCTGTGTTTGTCCAGGGTCCACAAGATTC...CCTCAATGAAAGCCCTGCCTGATGAGGTAACTCAAAAGGAATTGGGGTGGGAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000194296.6 |
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| 3UTR CAA 90 bp | ATTCAGGGTGAGGAAGACAGAAGAAGGAACCAGTCAGTGACGCCTTaGTACCCGAACCTTCAAATCCTCTGTAAGGAGTTACAATTCCCA | + |
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Preference number: 2 (lower is better) Translates to: IQGEEDRRRNQSVTP*YPNLQILCKELQFP Trigger: TGGGAATTGTAACTCCTTACAGAGGATTTGAAGGTTCGGGTACAAAGGCGTCACTGACTGGTTCCTTCTTCTGTCTTCCTCACCCTGAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194296.6 |
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| 3UTR-3UTR CCA 90 bp | TTTCCTAGAATAGTAAGATTCACAGGGGCTGGGAAAGAGGGAAATGAAGACCATAAGGAAAAAGTGGGATaGAGAGCGAGGCACCACAGG | + |
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Preference number: 2 (lower is better) Translates to: FPRIVRFTGAGKEGNEDHKEKVG*RARHHR Trigger: CCTGTGGTGCCTCGCTCTCCATCCCACTTTTTCCTT...ATGGTCTTCATTTCCCTCTTTCCCAGCCCCTGTGAATCTTACTATTCTAGGAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000194296.6 |
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| 3UTR-3UTR TCA 90 bp | TTTTTCAGCACCATTGGCCTGACAGAAGTCAGAGATTTCCAGAAAATGTTTACTTGGGAAAGAGGGAAATaGAGACCATTGGTCCTGGCG | + |
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Preference number: 2 (lower is better) Translates to: FFSTIGLTEVRDFQKMFTWERGK*RPLVLA Trigger: CGCCAGGACCAATGGTCTTCATTTCCCTCTTTCCCA...AGTAAACATTTTCTGGAAATCTCTGACTTCTGTCAGGCCAATGGTGCTGAAAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000194296.6 |
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| 3UTR-3UTR CCA 90 bp | GGAAGACAGAAGAAGGAACCAGTCAGTGACGCCTTTGTACCCGAACCTTCAAATCAAAAGGCTAATCAATaGATGAATCTCGAGAGCACT | + |
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Preference number: 2 (lower is better) Translates to: GRQKKEPVSDAFVPEPSNQKANQ*MNLEST Trigger: AGTGCTCTCGAGATTCATCCATTGATTAGCCTTTTG...ATTTGAAGGTTCGGGTACAAAGGCGTCACTGACTGGTTCCTTCTTCTGTCTTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194296.6 |
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| 3UTR-3UTR CCA 90 bp | GGAAGACAGAAGAAGGAACCAGTCAGTGACGCCTTTGTACCCGAACCTTCAAATGAGTTACAATTCCCATaGTGCAAAGAGAAACCGAAA | + |
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Preference number: 2 (lower is better) Translates to: GRQKKEPVSDAFVPEPSNELQFP*CKEKPK Trigger: TTTCGGTTTCTCTTTGCACCATGGGAATTGTAACTC...ATTTGAAGGTTCGGGTACAAAGGCGTCACTGACTGGTTCCTTCTTCTGTCTTCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194296.6 |
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| 3UTR-3UTR CCA 90 bp | TTTTTCAGCACCATTGGCCTGACAGAAGTCAGAGATTTCCAGAAAATGTTTACTGAGCCACCCCATGCTTaGGGAGTATATGGGTTTTCA | + |
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Preference number: 2 (lower is better) Translates to: FFSTIGLTEVRDFQKMFTEPPHA*GVYGFS Trigger: TGAAAACCCATATACTCCCCAAGCATGGGGTGGCTC...AGTAAACATTTTCTGGAAATCTCTGACTTCTGTCAGGCCAATGGTGCTGAAAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000194296.6 |
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| 3UTR-3UTR TCA 90 bp | TTTTTCAGCACCATTGGCCTGACAGAAGTCAGAGATTTCCAGAAAATGTTTACTACAACAAAAAGAAACTaGGGTGGGGTAGTGGCTACG | + |
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Preference number: 2 (lower is better) Translates to: FFSTIGLTEVRDFQKMFTTTKRN*GGVVAT Trigger: CGTAGCCACTACCCCACCTCAGTTTCTTTTTGTTGT...AGTAAACATTTTCTGGAAATCTCTGACTTCTGTCAGGCCAATGGTGCTGAAAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000194296.6 |
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| 3UTR-3UTR CCA 90 bp | TTTTTCAGCACCATTGGCCTGACAGAAGTCAGAGATTTCCAGAAAATGTTTACTAAAAAGAAACTGAGGTaGGGTAGTGGCTACGTCCTC | + |
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Preference number: 2 (lower is better) Translates to: FFSTIGLTEVRDFQKMFTKKKLR*GSGYVL Trigger: GAGGACGTAGCCACTACCCCACCTCAGTTTCTTTTT...AGTAAACATTTTCTGGAAATCTCTGACTTCTGTCAGGCCAATGGTGCTGAAAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000194296.6 |
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| 3UTR-3UTR TCA 90 bp | TTTTTCAGCACCATTGGCCTGACAGAAGTCAGAGATTTCCAGAAAATGTTTACTAATAAGGATCAGCTATaGCTGAAAGCATCCAGCAAA | + |
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Preference number: 2 (lower is better) Translates to: FFSTIGLTEVRDFQKMFTNKDQL*LKASSK Trigger: TTTGCTGGATGCTTTCAGTCATAGCTGATCCTTATT...AGTAAACATTTTCTGGAAATCTCTGACTTCTGTCAGGCCAATGGTGCTGAAAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000194296.6 |
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| 3UTR TCA 72 bp | TCCTGGACACCTGATCTGTCATCCTCAGTATCCCACTaGCACGGAGGCCCAACGTTAGAGCCACCCCATGCT | + |
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Preference number: 3 (lower is better) Translates to: SWTPDLSSSVSH*HGGPTLEPPHA Trigger: AGCATGGGGTGGCTCTAACGTTGGGCCTCCGTGTCAGTGGGATACTGAGGATGACAGATCAGGTGTCCAGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194296.6 |
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| 3UTR GCA 72 bp | GTGAGCTCATCACGCTGTAGGCATGCAGAGAGTCTATaGTCCTCTCCGGATGCTCGTGAGGAGGGGGAGAAA | + |
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Preference number: 3 (lower is better) Translates to: VSSSRCRHAESL*SSPDAREEGEK Trigger: TTTCTCCCCCTCCTCACGAGCATCCGGAGAGGAGCATAGACTCTCTGCATGCCTACAGCGTGATGAGCTCAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000194296.6 |
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| 3UTR TCA 72 bp | AATACCATGGTTTGGGGGACGTGGAAGTCAACCCTGTaGAGGAAAAAGTGGGATGGAGAGCGAGGCACCACA | + |
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Preference number: 3 (lower is better) Translates to: NTMVWGTWKSTL*RKKWDGERGTT Trigger: TGTGGTGCCTCGCTCTCCATCCCACTTTTTCCTTCACAGGGTTGACTTCCACGTCCCCCAAACCATGGTATT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000194296.6 |
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| 3UTR TCA 72 bp | TTCCAGGAATCACCCAGAAGCAAAGCCCATTCAGGGTaGGGAAGACAGAAGAAGGAACCAGTCAGTGACGCC | + |
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Preference number: 3 (lower is better) Translates to: FQESPRSKAHSG*GRQKKEPVSDA Trigger: GGCGTCACTGACTGGTTCCTTCTTCTGTCTTCCTCACCCTGAATGGGCTTTGCTTCTGGGTGATTCCTGGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194296.6 |
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| 3UTR-3UTR CAA 90 bp | GGAAGACAGAAGAAGGAACCAGTCAGTGACGCCTTTGTACCCGAACCTTCAAATGGCTCCCGCAGCTCCTaGAAGAGTCATGATTTGCTG | + |
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Preference number: 3 (lower is better) Translates to: GRQKKEPVSDAFVPEPSNGSRSS*KSHDLL Trigger: CAGCAAATCATGACTCTTCAAGGAGCTGCGGGAGCC...ATTTGAAGGTTCGGGTACAAAGGCGTCACTGACTGGTTCCTTCTTCTGTCTTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194296.6 |
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| 3UTR TCA 72 bp | TGGCTCTGGTGCAAACCTGAGACAACAAAAAGAAACTaGGGTGGGGTAGTGGCTACGTCCTCCATCTTCACG | + |
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Preference number: 3 (lower is better) Translates to: WLWCKPETTKRN*GGVVATSSIFT Trigger: CGTGAAGATGGAGGACGTAGCCACTACCCCACCTCAGTTTCTTTTTGTTGTCTCAGGTTTGCACCAGAGCCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000194296.6 |
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| 3UTR TCA 72 bp | TTAGTCAGCCCTGTCCCTAGGTTTCTCCATCACTGCTaGCAATTTCCAGGAATCACCCAGAAGCAAAGCCCA | + |
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Preference number: 3 (lower is better) Translates to: LVSPVPRFLHHC*QFPGITQKQSP Trigger: TGGGCTTTGCTTCTGGGTGATTCCTGGAAATTGTCAGCAGTGATGGAGAAACCTAGGGACAGGGCTGACTAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194296.6 |
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| 3UTR TCA 72 bp | ACGTGGAGAAGACACAGGGTGCTGGCTCCCTGCTTCTaGCATAGTCTCCTGAATCTTTCAAAGGGAAATGAG | + |
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Preference number: 3 (lower is better) Translates to: TWRRHRVLAPCF*HSLLNLSKGNE Trigger: CTCATTTCCCTTTGAAAGATTCAGGAGACTATGTCAGAAGCAGGGAGCCAGCACCCTGTGTCTTCTCCACGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194296.6 |
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| 3UTR TCA 72 bp | GCAAAGAGAAACCGAAAAGCAAAACATACAAGCTTGTaGTTGAAGGGACCCTCGGTGAGCTCATCACGCTGT | + |
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Preference number: 3 (lower is better) Translates to: AKRNRKAKHTSL*LKGPSVSSSRC Trigger: ACAGCGTGATGAGCTCACCGAGGGTCCCTTCAATCACAAGCTTGTATGTTTTGCTTTTCGGTTTCTCTTTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000194296.6 |
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| 3UTR-3UTR CAA 90 bp | TTTCCTAGAATAGTAAGATTCACAGGGGCTGGGAAAGAGGGAAATGAAGACCATCCTAAGGCTATCTACTaGGTATCCTCAGACTGCCCA | + |
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Preference number: 3 (lower is better) Translates to: FPRIVRFTGAGKEGNEDHPKAIY*VSSDCP Trigger: TGGGCAGTCTGAGGATACCAAGTAGATAGCCTTAGG...ATGGTCTTCATTTCCCTCTTTCCCAGCCCCTGTGAATCTTACTATTCTAGGAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194296.6 |
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| 3UTR-3UTR CAA 90 bp | TTTCCTAGAATAGTAAGATTCACAGGGGCTGGGAAAGAGGGAAATGAAGACCATCTGAGGACTAGAATCTaGTGGACCCTGGACAAACAC | + |
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Preference number: 3 (lower is better) Translates to: FPRIVRFTGAGKEGNEDHLRTRI*WTLDKH Trigger: GTGTTTGTCCAGGGTCCACAAGATTCTAGTCCTCAG...ATGGTCTTCATTTCCCTCTTTCCCAGCCCCTGTGAATCTTACTATTCTAGGAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194296.6 |
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| 3UTR TCA 72 bp | GAAAATGAAGGAGATTCAAATGCAGTCTACACTGCCTaGGGACTAGAATCTTGTGGACCCTGGACAAACACA | + |
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Preference number: 3 (lower is better) Translates to: ENEGDSNAVYTA*GLESCGPWTNT Trigger: TGTGTTTGTCCAGGGTCCACAAGATTCTAGTCCTCAGGCAGTGTAGACTGCATTTGAATCTCCTTCATTTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194296.6 |
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| 3UTR TCA 72 bp | TTCCTTTTGAGTTACCTCATCAGGCAGGGCTTTCATTaGGGCATAGTGATGATGTGGCAAGATATGATTGGC | + |
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Preference number: 3 (lower is better) Translates to: FLLSYLIRQGFH*GIVMMWQDMIG Trigger: GCCAATCATATCTTGCCACATCATCACTATGCCTCAATGAAAGCCCTGCCTGATGAGGTAACTCAAAAGGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194296.6 |
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| 3UTR GCA 72 bp | CTTCAAATCCTCTGTAAGGAGTTACAATTCCCATGGTaGAAAGAGAAACCGAAAAGCAAAACATACAAGCTT | + |
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Preference number: 3 (lower is better) Translates to: LQILCKELQFPW*KEKPKSKTYKL Trigger: AAGCTTGTATGTTTTGCTTTTCGGTTTCTCTTTGCACCATGGGAATTGTAACTCCTTACAGAGGATTTGAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000194296.6 |
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| CDS-3UTR CCA 90 bp | GGACCCACTAGGCAGGCACTGTGTCCTGGGCTTCAAAGAAGAAAGGCCAGGCCCCGGGACTCCCCTCCATaGAAGAGTCACACCAGTGGT | + |
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Preference number: 4 (lower is better) Translates to: GPTRQALCPGLQRRKARPRDSPP*KSHTSG Trigger: ACCACTGGTGTGACTCTTCCATGGAGGGGAGTCCCG...GGGCCTGGCCTTTCTTCTTTGAAGCCCAGGACACAGTGCCTGCCTAGTGGGTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000194296.6 |
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| CDS-3UTR CCA 90 bp | GGACCCACTAGGCAGGCACTGTGTCCTGGGCTTCAAAGAAGAAAGGCCAGGCCCTCCCAGCAGCTGGACTaGGGAAGATGCTGGATACCT | + |
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Preference number: 4 (lower is better) Translates to: GPTRQALCPGLQRRKARPSQQLD*GRCWIP Trigger: AGGTATCCAGCATCTTCCCCAGTCCAGCTGCTGGGA...GGGCCTGGCCTTTCTTCTTTGAAGCCCAGGACACAGTGCCTGCCTAGTGGGTCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194296.6 |
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| CDS-3UTR TCA 90 bp | GGACCCACTAGGCAGGCACTGTGTCCTGGGCTTCAAAGAAGAAAGGCCAGGCCCACTGTGACTGCTCTGTaGAGTCCCCATCCCATTGGA | + |
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Preference number: 4 (lower is better) Translates to: GPTRQALCPGLQRRKARPTVTAL*SPHPIG Trigger: TCCAATGGGATGGGGACTTCACAGAGCAGTCACAGT...GGGCCTGGCCTTTCTTCTTTGAAGCCCAGGACACAGTGCCTGCCTAGTGGGTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194296.6 |
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| CDS-3UTR GCA 90 bp | GGACCCACTAGGCAGGCACTGTGTCCTGGGCTTCAAAGAAGAAAGGCCAGGCCCTGCCTGCCTTGCAATTaGAGGGTATGTGTCCCAGCA | + |
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Preference number: 4 (lower is better) Translates to: GPTRQALCPGLQRRKARPCLPCN*RVCVPA Trigger: TGCTGGGACACATACCCTGCAATTGCAAGGCAGGCA...GGGCCTGGCCTTTCTTCTTTGAAGCCCAGGACACAGTGCCTGCCTAGTGGGTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194296.6 |
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| CDS-3UTR CCA 90 bp | GGACCCACTAGGCAGGCACTGTGTCCTGGGCTTCAAAGAAGAAAGGCCAGGCCCCTCCTGGGTGGCATATaGTATCTCACTTTCTTCCAG | + |
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Preference number: 4 (lower is better) Translates to: GPTRQALCPGLQRRKARPLLGGI*YLTFFQ Trigger: CTGGAAGAAAGTGAGATACCATATGCCACCCAGGAG...GGGCCTGGCCTTTCTTCTTTGAAGCCCAGGACACAGTGCCTGCCTAGTGGGTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194296.6 |
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| CDS-3UTR TCA 90 bp | AGGCACTGTGTCCTGGGCTTCAAAGAAGAAAGGCCAGGCCCCATTAGTCAGCCCTATTGCAGTTCACGATaGGGGTGGAGCCAAGTGGAA | + |
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Preference number: 4 (lower is better) Translates to: RHCVLGFKEERPGPISQPYCSSR*GWSQVE Trigger: TTCCACTTGGCTCCACCCTCATCGTGAACTGCAATA...GGGCTGACTAATGGGGCCTGGCCTTTCTTCTTTGAAGCCCAGGACACAGTGCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000194296.6 |
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| CDS-3UTR TCA 90 bp | GGAAGACAGAAGAAGGAACCAGTCAGTGACGCCTTTGTACCCGAACCTTCAAATGCGGACACTCCAGCATaGCACGTGAAAGGACGGCCG | + |
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Preference number: 4 (lower is better) Translates to: GRQKKEPVSDAFVPEPSNADTPA*HVKGRP Trigger: CGGCCGTCCTTTCACGTGTCATGCTGGAGTGTCCGC...ATTTGAAGGTTCGGGTACAAAGGCGTCACTGACTGGTTCCTTCTTCTGTCTTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194296.6 |
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| CDS-3UTR CCA 90 bp | AGGCACTGTGTCCTGGGCTTCAAAGAAGAAAGGCCAGGCCCCATTAGTCAGCCCGAAGCTAGACGACTCTaGTGCCACAAAGACCATCAG | + |
|
Preference number: 4 (lower is better) Translates to: RHCVLGFKEERPGPISQPEARRL*CHKDHQ Trigger: CTGATGGTCTTTGTGGCACCAGAGTCGTCTAGCTTC...GGGCTGACTAATGGGGCCTGGCCTTTCTTCTTTGAAGCCCAGGACACAGTGCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194296.6 |
||
| CDS-3UTR TCA 90 bp | CTTCCCACCCCAATTCCTTTTGAGTTACCTCATCAGGCAGGGCTTTCATTGAGGCCACCAGGGTGTTGTTaGCTCTCCAGCACCTCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: LPTPIPFELPHQAGLSLRPPGCC*LSSTSG Trigger: ACCTGAGGTGCTGGAGAGTCAACAACACCCTGGTGG...CCTCAATGAAAGCCCTGCCTGATGAGGTAACTCAAAAGGAATTGGGGTGGGAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000194296.6 |
||
| CDS-3UTR TCA 90 bp | CTTCCCACCCCAATTCCTTTTGAGTTACCTCATCAGGCAGGGCTTTCATTGAGGGCGGGTATGTGCAGTTaGAAGGAAAAGGCTGGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: LPTPIPFELPHQAGLSLRAGMCS*KEKAGP Trigger: AGGGCCAGCCTTTTCCTTTCAACTGCACATACCCGC...CCTCAATGAAAGCCCTGCCTGATGAGGTAACTCAAAAGGAATTGGGGTGGGAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000194296.6 |
||
| CDS-3UTR TCA 90 bp | TCTCAAACCAGGATCAAGCATCCTGGACACCTGATCTGTCATCCTCAGTATCCCAAGTGTCTCCCCAAGTaGGTCAGTCTGGCTGAGCAC | + |
|
Preference number: 4 (lower is better) Translates to: SQTRIKHPGHLICHPQYPKCLPK*VSLAEH Trigger: GTGCTCAGCCAGACTGACTCACTTGGGGAGACACTT...GGGATACTGAGGATGACAGATCAGGTGTCCAGGATGCTTGATCCTGGTTTGAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194296.6 |
||
| CDS-3UTR CCA 90 bp | TCTCAAACCAGGATCAAGCATCCTGGACACCTGATCTGTCATCCTCAGTATCCCCCAAGTGAGTCAGTCTaGCTGAGCACGCATAGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: SQTRIKHPGHLICHPQYPPSESV*LSTHSS Trigger: GGAGCTATGCGTGCTCAGCCAGACTGACTCACTTGG...GGGATACTGAGGATGACAGATCAGGTGTCCAGGATGCTTGATCCTGGTTTGAGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000194296.6 |
||
| CDS-3UTR CCA 90 bp | TCTCAAACCAGGATCAAGCATCCTGGACACCTGATCTGTCATCCTCAGTATCCCGACTGGGGAAGATGCTaGATACCTCCTGGGTGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: SQTRIKHPGHLICHPQYPDWGRC*IPPGWH Trigger: ATGCCACCCAGGAGGTATCCAGCATCTTCCCCAGTC...GGGATACTGAGGATGACAGATCAGGTGTCCAGGATGCTTGATCCTGGTTTGAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194296.6 |
||
| CDS-3UTR CCA 90 bp | TCTCAAACCAGGATCAAGCATCCTGGACACCTGATCTGTCATCCTCAGTATCCCATGTGTCCCAGCAGCTaGACTGGGGAAGATGCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: SQTRIKHPGHLICHPQYPMCPSS*TGEDAG Trigger: TCCAGCATCTTCCCCAGTCCAGCTGCTGGGACACAT...GGGATACTGAGGATGACAGATCAGGTGTCCAGGATGCTTGATCCTGGTTTGAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194296.6 |
||
| CDS-3UTR GCA 90 bp | TCTCAAACCAGGATCAAGCATCCTGGACACCTGATCTGTCATCCTCAGTATCCCGCCCTGTGGCAGCATTaGATTTGCCTGCCTTGCAAT | + |
|
Preference number: 4 (lower is better) Translates to: SQTRIKHPGHLICHPQYPALWQH*ICLPCN Trigger: ATTGCAAGGCAGGCAAATGCAATGCTGCCACAGGGC...GGGATACTGAGGATGACAGATCAGGTGTCCAGGATGCTTGATCCTGGTTTGAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194296.6 |
||
| CDS-3UTR CCA 90 bp | GGAAGACAGAAGAAGGAACCAGTCAGTGACGCCTTTGTACCCGAACCTTCAAATCAGCTTCTCATCATCTaGAGCCTGGGCAGTGTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: GRQKKEPVSDAFVPEPSNQLLII*SLGSVE Trigger: TTCCACACTGCCCAGGCTCCAGATGATGAGAAGCTG...ATTTGAAGGTTCGGGTACAAAGGCGTCACTGACTGGTTCCTTCTTCTGTCTTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194296.6 |
||
| CDS-3UTR CCA 90 bp | GGAAGACAGAAGAAGGAACCAGTCAGTGACGCCTTTGTACCCGAACCTTCAAATTCTACATCATGGCCCTaGCTTCCTCTCGGGTACTTG | + |
|
Preference number: 4 (lower is better) Translates to: GRQKKEPVSDAFVPEPSNSTSWP*LPLGYL Trigger: CAAGTACCCGAGAGGAAGCCAGGGCCATGATGTAGA...ATTTGAAGGTTCGGGTACAAAGGCGTCACTGACTGGTTCCTTCTTCTGTCTTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194296.6 |
||
| 3UTR CAA 72 bp | CTACTGTCCTTGCTGATCTTCCCTAAGGCTATCTACTaGGTATCCTCAGACTGCCCAGCCTCCCATCTCAAA | + |
|
Preference number: 4 (lower is better) Translates to: LLSLLIFPKAIY*VSSDCPASHLK Trigger: TTTGAGATGGGAGGCTGGGCAGTCTGAGGATACCAAGTAGATAGCCTTAGGGAAGATCAGCAAGGACAGTAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194296.6 |
||
| CDS-3UTR TCA 90 bp | CTTCCCACCCCAATTCCTTTTGAGTTACCTCATCAGGCAGGGCTTTCATTGAGGCTAAGAGGTAAGCCCTaGAGTCTGGAACTGGGTATA | + |
|
Preference number: 4 (lower is better) Translates to: LPTPIPFELPHQAGLSLRLRGKP*SLELGI Trigger: TATACCCAGTTCCAGACTTCAGGGCTTACCTCTTAG...CCTCAATGAAAGCCCTGCCTGATGAGGTAACTCAAAAGGAATTGGGGTGGGAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000194296.6 |
||
| CDS-3UTR GCA 90 bp | CTTCCCACCCCAATTCCTTTTGAGTTACCTCATCAGGCAGGGCTTTCATTGAGGAGCATTGCATTTGCCTaGCTTGCAATTGCAGGGTAT | + |
|
Preference number: 4 (lower is better) Translates to: LPTPIPFELPHQAGLSLRSIAFA*LAIAGY Trigger: ATACCCTGCAATTGCAAGGCAGGCAAATGCAATGCT...CCTCAATGAAAGCCCTGCCTGATGAGGTAACTCAAAAGGAATTGGGGTGGGAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000194296.6 |
||
| CDS-3UTR CCA 90 bp | TTTCCTAGAATAGTAAGATTCACAGGGGCTGGGAAAGAGGGAAATGAAGACCATAGTGTGTCTACATCATaGCCCTGGCTTCCTCTCGGG | + |
|
Preference number: 4 (lower is better) Translates to: FPRIVRFTGAGKEGNEDHSVSTS*PWLPLG Trigger: CCCGAGAGGAAGCCAGGGCCATGATGTAGACACACT...ATGGTCTTCATTTCCCTCTTTCCCAGCCCCTGTGAATCTTACTATTCTAGGAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194296.6 |
||
| CDS-3UTR TCA 90 bp | GGAAGACAGAAGAAGGAACCAGTCAGTGACGCCTTTGTACCCGAACCTTCAAATTGGTGCTGTAGTCTTTaGCTTTCTCCAGTTCGATCA | + |
|
Preference number: 4 (lower is better) Translates to: GRQKKEPVSDAFVPEPSNWCCSL*LSPVRS Trigger: TGATCGAACTGGAGAAAGTCAAAGACTACAGCACCA...ATTTGAAGGTTCGGGTACAAAGGCGTCACTGACTGGTTCCTTCTTCTGTCTTCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194296.6 |
||
| CDS-3UTR CCA 90 bp | CTTCCCACCCCAATTCCTTTTGAGTTACCTCATCAGGCAGGGCTTTCATTGAGGCATACTCAACTTCCTTaGTGTTCACAGCAATGTAGT | + |
|
Preference number: 4 (lower is better) Translates to: LPTPIPFELPHQAGLSLRHTQLP*CSQQCS Trigger: ACTACATTGCTGTGAACACCAAGGAAGTTGAGTATG...CCTCAATGAAAGCCCTGCCTGATGAGGTAACTCAAAAGGAATTGGGGTGGGAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000194296.6 |
||
| CDS-3UTR CCA 90 bp | TTTTTCAGCACCATTGGCCTGACAGAAGTCAGAGATTTCCAGAAAATGTTTACTTCATCATCTGGAGCCTaGGCAGTGTGGAAGGCGCTT | + |
|
Preference number: 4 (lower is better) Translates to: FFSTIGLTEVRDFQKMFTSSSGA*AVWKAL Trigger: AAGCGCCTTCCACACTGCCCAGGCTCCAGATGATGA...AGTAAACATTTTCTGGAAATCTCTGACTTCTGTCAGGCCAATGGTGCTGAAAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000194296.6 |
||
| CDS-3UTR CCA 90 bp | CAAATAAACAAAAAGCTACAAGGGCAAGGACAAGGTCGCTCACAAGCACAAAAGGTCGGATATACTGAATaGACTCGGGCATGGTGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: QINKKLQGQGQGRSQAQKVGYTE*TRAWCC Trigger: ACAGCACCATGCCCGAGTCCATTCAGTATATCCGAC...CTTTTGTGCTTGTGAGCGACCTTGTCCTTGCCCTTGTAGCTTTTTGTTTATTTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000194296.6 |
||
| CDS-3UTR CCA 90 bp | CAAATAAACAAAAAGCTACAAGGGCAAGGACAAGGTCGCTCACAAGCACAAAAGTCCAGAACTTGGTCTTaGCACACTGTGACTGCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: QINKKLQGQGQGRSQAQKSRTWS*HTVTAL Trigger: CAGAGCAGTCACAGTGTGCCAAGACCAAGTTCTGGA...CTTTTGTGCTTGTGAGCGACCTTGTCCTTGCCCTTGTAGCTTTTTGTTTATTTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000194296.6 |
||
| CDS-3UTR GCA 90 bp | TTTCCTAGAATAGTAAGATTCACAGGGGCTGGGAAAGAGGGAAATGAAGACCATTGCATTTGCCTGCCTTaGAATTGCAGGGTATGTGTC | + |
|
Preference number: 4 (lower is better) Translates to: FPRIVRFTGAGKEGNEDHCICLP*NCRVCV Trigger: GACACATACCCTGCAATTGCAAGGCAGGCAAATGCA...ATGGTCTTCATTTCCCTCTTTCCCAGCCCCTGTGAATCTTACTATTCTAGGAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194296.6 |
||
| CDS-3UTR CCA 90 bp | TTTCCTAGAATAGTAAGATTCACAGGGGCTGGGAAAGAGGGAAATGAAGACCATGAGGGTGGAGCCAAGTaGAACTTCAATGGAGTTGTT | + |
|
Preference number: 4 (lower is better) Translates to: FPRIVRFTGAGKEGNEDHEGGAK*NFNGVV Trigger: AACAACTCCATTGAAGTTCCACTTGGCTCCACCCTC...ATGGTCTTCATTTCCCTCTTTCCCAGCCCCTGTGAATCTTACTATTCTAGGAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194296.6 |
||
| CDS-3UTR GCA 90 bp | CAAATAAACAAAAAGCTACAAGGGCAAGGACAAGGTCGCTCACAAGCACAAAAGCGATTCCTTCCTGGATaGGTTTGGAGTCTTTGTAGT | + |
|
Preference number: 4 (lower is better) Translates to: QINKKLQGQGQGRSQAQKRFLPG*VWSLCS Trigger: ACTACAAAGACTCCAAACGCATCCAGGAAGGAATCG...CTTTTGTGCTTGTGAGCGACCTTGTCCTTGCCCTTGTAGCTTTTTGTTTATTTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000194296.6 |
||
| CDS-3UTR CCA 90 bp | TTTTTCAGCACCATTGGCCTGACAGAAGTCAGAGATTTCCAGAAAATGTTTACTCCCTCAAGGACACATTaGTTTCGATTCCTTCCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: FFSTIGLTEVRDFQKMFTPSRTH*FRFLPG Trigger: TCCAGGAAGGAATCGAAACCAATGTGTCCTTGAGGG...AGTAAACATTTTCTGGAAATCTCTGACTTCTGTCAGGCCAATGGTGCTGAAAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000194296.6 |
||
| CDS-3UTR CCA 90 bp | TTTTTCAGCACCATTGGCCTGACAGAAGTCAGAGATTTCCAGAAAATGTTTACTGTCCTCCAGTGTCAATaGAAGAAACAAGATCCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: FFSTIGLTEVRDFQKMFTVLQCQ*KKQDPG Trigger: ACCTGGATCTTGTTTCTTCCATTGACACTGGAGGAC...AGTAAACATTTTCTGGAAATCTCTGACTTCTGTCAGGCCAATGGTGCTGAAAAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000194296.6 |
||
| CDS-3UTR CCA 90 bp | TTTTTCAGCACCATTGGCCTGACAGAAGTCAGAGATTTCCAGAAAATGTTTACTTGGATACCTCCTGGGTaGCATATGGTATCTCACTTT | + |
|
Preference number: 4 (lower is better) Translates to: FFSTIGLTEVRDFQKMFTWIPPG*HMVSHF Trigger: AAAGTGAGATACCATATGCCACCCAGGAGGTATCCA...AGTAAACATTTTCTGGAAATCTCTGACTTCTGTCAGGCCAATGGTGCTGAAAAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000194296.6 |
||
| CDS-3UTR CCA 90 bp | TTTCCTAGAATAGTAAGATTCACAGGGGCTGGGAAAGAGGGAAATGAAGACCATCAAAGCACAACTTTCTaGGAAGTAGAGATGACAATT | + |
|
Preference number: 4 (lower is better) Translates to: FPRIVRFTGAGKEGNEDHQSTTF*EVEMTI Trigger: AATTGTCATCTCTACTTCCCAGAAAGTTGTGCTTTG...ATGGTCTTCATTTCCCTCTTTCCCAGCCCCTGTGAATCTTACTATTCTAGGAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194296.6 |
||
| CDS-3UTR CCA 90 bp | TTTTTCAGCACCATTGGCCTGACAGAAGTCAGAGATTTCCAGAAAATGTTTACTGTAAGCCCTGAAGTCTaGAACTGGGTATATCAGAAT | + |
|
Preference number: 4 (lower is better) Translates to: FFSTIGLTEVRDFQKMFTVSPEV*NWVYQN Trigger: ATTCTGATATACCCAGTTCCAGACTTCAGGGCTTAC...AGTAAACATTTTCTGGAAATCTCTGACTTCTGTCAGGCCAATGGTGCTGAAAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000194296.6 |
||
| CDS CCA 90 bp | TTTGCCTGCCTTGCAATTGCAGGGTATGTGTCCCAGCAGCTGGACTaGGGAAGATGCTGGATACCTCCTGGGTGGCATATGGTATCTCAC | + |
|
Preference number: 5 (lower is better) Translates to: FACLAIAGYVSQQLD*GRCWIPPGWHMVSH Trigger: GTGAGATACCATATGCCACCCAGGAGGTATCCAGCATCTTCCCCAGTCCAGCTGCTGGGACACATACCCTGCAATTGCAAGGCAGGCAAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095020.9 ENSMUST00000194296.6 |
||
| CDS-3UTR CAA 90 bp | AGGCACTGTGTCCTGGGCTTCAAAGAAGAAAGGCCAGGCCCCATTAGTCAGCCCTCCCTCAAGGACACATaGGTTTCGATTCCTTCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: RHCVLGFKEERPGPISQPSLKDT*VSIPSW Trigger: CCAGGAAGGAATCGAAACCAATGTGTCCTTGAGGGA...GGGCTGACTAATGGGGCCTGGCCTTTCTTCTTTGAAGCCCAGGACACAGTGCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194296.6 |
||
| CDS GCA 90 bp | GTAAGCCCTGAAGTCTGGAACTGGGTATATCAGAATGATGTAGGCTaGGGACACTCCAGCATGACACGTGAAAGGACGGCCGTAGTCCTC | + |
|
Preference number: 5 (lower is better) Translates to: VSPEVWNWVYQNDVG*GHSSMTRERTAVVL Trigger: GAGGACTACGGCCGTCCTTTCACGTGTCATGCTGGAGTGTCCGCAGCCTACATCATTCTGATATACCCAGTTCCAGACTTCAGGGCTTAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095020.9 ENSMUST00000194296.6 |
||
| CDS CCA 90 bp | TTGCATTTGCCTGCCTTGCAATTGCAGGGTATGTGTCCCAGCAGCTaGACTGGGGAAGATGCTGGATACCTCCTGGGTGGCATATGGTAT | + |
|
Preference number: 5 (lower is better) Translates to: LHLPALQLQGMCPSS*TGEDAGYLLGGIWY Trigger: ATACCATATGCCACCCAGGAGGTATCCAGCATCTTCCCCAGTCCAGCTGCTGGGACACATACCCTGCAATTGCAAGGCAGGCAAATGCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095020.9 ENSMUST00000194296.6 |
||
| CDS-3UTR CAA 90 bp | CTTCCCACCCCAATTCCTTTTGAGTTACCTCATCAGGCAGGGCTTTCATTGAGGGGCGGGTATGTGCAGTaGAAAGGAAAAGGCTGGCCC | + |
|
Preference number: 5 (lower is better) Translates to: LPTPIPFELPHQAGLSLRGGYVQ*KGKGWP Trigger: GGGCCAGCCTTTTCCTTTCAACTGCACATACCCGCC...CCTCAATGAAAGCCCTGCCTGATGAGGTAACTCAAAAGGAATTGGGGTGGGAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000194296.6 |
||
| CDS-3UTR CAA 90 bp | AGGCACTGTGTCCTGGGCTTCAAAGAAGAAAGGCCAGGCCCCATTAGTCAGCCCTCCTCCACAGCAACGTaGTTCACAAGAAGCTTTGCT | + |
|
Preference number: 5 (lower is better) Translates to: RHCVLGFKEERPGPISQPSSTAT*FTRSFA Trigger: AGCAAAGCTTCTTGTGAACAACGTTGCTGTGGAGGA...GGGCTGACTAATGGGGCCTGGCCTTTCTTCTTTGAAGCCCAGGACACAGTGCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194296.6 |
||
| CDS-3UTR CAA 90 bp | CTTCCCACCCCAATTCCTTTTGAGTTACCTCATCAGGCAGGGCTTTCATTGAGGGACGCTGGCCACAGCTaGTCCAGGGAATTCATCCCT | + |
|
Preference number: 5 (lower is better) Translates to: LPTPIPFELPHQAGLSLRDAGHS*SREFIP Trigger: AGGGATGAATTCCCTGGACAAGCTGTGGCCAGCGTC...CCTCAATGAAAGCCCTGCCTGATGAGGTAACTCAAAAGGAATTGGGGTGGGAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000194296.6 |
||
| CDS-3UTR CAA 90 bp | GGAAGACAGAAGAAGGAACCAGTCAGTGACGCCTTTGTACCCGAACCTTCAAATGAAGTCCCCATCCCATaGGATGGCCCCGTGCTTCTG | + |
|
Preference number: 5 (lower is better) Translates to: GRQKKEPVSDAFVPEPSNEVPIP*DGPVLL Trigger: CAGAAGCACGGGGCCATCCAATGGGATGGGGACTTC...ATTTGAAGGTTCGGGTACAAAGGCGTCACTGACTGGTTCCTTCTTCTGTCTTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000194296.6 |
||
| CDS-3UTR CAA 90 bp | AGGCACTGTGTCCTGGGCTTCAAAGAAGAAAGGCCAGGCCCCATTAGTCAGCCCACTTTCTTCCAGAACTaGGTCTTGGCACACTGTGAC | + |
|
Preference number: 5 (lower is better) Translates to: RHCVLGFKEERPGPISQPTFFQN*VLAHCD Trigger: GTCACAGTGTGCCAAGACCAAGTTCTGGAAGAAAGT...GGGCTGACTAATGGGGCCTGGCCTTTCTTCTTTGAAGCCCAGGACACAGTGCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194296.6 |
||
| CDS-3UTR CAA 90 bp | TCTCAAACCAGGATCAAGCATCCTGGACACCTGATCTGTCATCCTCAGTATCCCTCATCCACCAGGGTGTaGTTGACTCTCCAGCACCTC | + |
|
Preference number: 5 (lower is better) Translates to: SQTRIKHPGHLICHPQYPSSTRV*LTLQHL Trigger: GAGGTGCTGGAGAGTCAACAACACCCTGGTGGATGA...GGGATACTGAGGATGACAGATCAGGTGTCCAGGATGCTTGATCCTGGTTTGAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194296.6 |
||
| CDS CCA 90 bp | GTACCAGTGTGTCTACATCATGGCCCTGGCTTCCTCTCGGGTACTTaGGGTATAAGACATAGGCATCATACAGCTTCTCATCATCTGGAG | + |
|
Preference number: 5 (lower is better) Translates to: VPVCLHHGPGFLSGT*GIRHRHHTASHHLE Trigger: CTCCAGATGATGAGAAGCTGTATGATGCCTATGTCTTATACCCCAAGTACCCGAGAGGAAGCCAGGGCCATGATGTAGACACACTGGTAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095020.9 ENSMUST00000194296.6 |
||
| CDS-3UTR CAA 90 bp | GGAAGACAGAAGAAGGAACCAGTCAGTGACGCCTTTGTACCCGAACCTTCAAATGTGGCAGCATTGCATTaGCCTGCCTTGCAATTGCAG | + |
|
Preference number: 5 (lower is better) Translates to: GRQKKEPVSDAFVPEPSNVAALH*PALQLQ Trigger: CTGCAATTGCAAGGCAGGCAAATGCAATGCTGCCAC...ATTTGAAGGTTCGGGTACAAAGGCGTCACTGACTGGTTCCTTCTTCTGTCTTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194296.6 |
||
| CDS CCA 90 bp | CCAGGTCTGGTCCTGGTGAACTCTAAGGTGTCTGTTGTTAGATACTaGGCTTTTGCTAGGTGTTTTGTACCATGTCAGATTTACTGCCCC | + |
|
Preference number: 5 (lower is better) Translates to: PGLVLVNSKVSVVRY*AFARCFVPCQIYCP Trigger: GGGGCAGTAAATCTGACATGGTACAAAACACCTAGCAAAAGCCCAGTATCTAACAACAGACACCTTAGAGTTCACCAGGACCAGACCTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000095020.9 ENSMUST00000193388.2 ENSMUST00000194296.6 |
||
| CDS-3UTR CAA 90 bp | TTTTTCAGCACCATTGGCCTGACAGAAGTCAGAGATTTCCAGAAAATGTTTACTTCCACCAGGGTGTTGTaGACTCTCCAGCACCTCAGG | + |
|
Preference number: 5 (lower is better) Translates to: FFSTIGLTEVRDFQKMFTSTRVL*TLQHLR Trigger: CCTGAGGTGCTGGAGAGTCAACAACACCCTGGTGGA...AGTAAACATTTTCTGGAAATCTCTGACTTCTGTCAGGCCAATGGTGCTGAAAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000194296.6 |
||
| CDS CCA 90 bp | ATTCCTTATAACACACTGATAGATACCGGAGTCCTCCAGTGTCAATaGAAGAAACAAGATCCAGGTCTGGTCCTGGTGAACTCTAAGGTG | + |
|
Preference number: 5 (lower is better) Translates to: IPYNTLIDTGVLQCQ*KKQDPGLVLVNSKV Trigger: CACCTTAGAGTTCACCAGGACCAGACCTGGATCTTGTTTCTTCCATTGACACTGGAGGACTCCGGTATCTATCAGTGTGTTATAAGGAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000095020.9 ENSMUST00000193388.2 ENSMUST00000194296.6 |
||
| CDS CCA 90 bp | CACGATGAGGGTGGAGCCAAGTGGAACTTCAATGGAGTTGTTCTTTaGATACGTGATGTTAGGGATCCTTCTTCCATACTCAACTTCCTT | + |
|
Preference number: 5 (lower is better) Translates to: HDEGGAKWNFNGVVL*IRDVRDPSSILNFL Trigger: AAGGAAGTTGAGTATGGAAGAAGGATCCCTAACATCACGTATCCAAAGAACAACTCCATTGAAGTTCCACTTGGCTCCACCCTCATCGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095020.9 ENSMUST00000194296.6 |
||
| CDS-3UTR CAA 90 bp | TCTCAAACCAGGATCAAGCATCCTGGACACCTGATCTGTCATCCTCAGTATCCCTTAGATACTGGGCTTTaGCTAGGTGTTTTGTACCAT | + |
|
Preference number: 5 (lower is better) Translates to: SQTRIKHPGHLICHPQYPLDTGL*LGVLYH Trigger: ATGGTACAAAACACCTAGCAAAAGCCCAGTATCTAA...GGGATACTGAGGATGACAGATCAGGTGTCCAGGATGCTTGATCCTGGTTTGAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194296.6 |
||
| CDS-3UTR CAA 90 bp | TTTCCTAGAATAGTAAGATTCACAGGGGCTGGGAAAGAGGGAAATGAAGACCATTTCCAGAACTTGGTCTaGGCACACTGTGACTGCTCT | + |
|
Preference number: 5 (lower is better) Translates to: FPRIVRFTGAGKEGNEDHFQNLV*AHCDCS Trigger: AGAGCAGTCACAGTGTGCCAAGACCAAGTTCTGGAA...ATGGTCTTCATTTCCCTCTTTCCCAGCCCCTGTGAATCTTACTATTCTAGGAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194296.6 |
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| CDS CCA 90 bp | CTTCGTGTCTGTTATATTGCAGTTCACGATGAGGGTGGAGCCAAGTaGAACTTCAATGGAGTTGTTCTTTGGATACGTGATGTTAGGGAT | + |
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Preference number: 5 (lower is better) Translates to: LRVCYIAVHDEGGAK*NFNGVVLWIRDVRD Trigger: ATCCCTAACATCACGTATCCAAAGAACAACTCCATTGAAGTTCCACTTGGCTCCACCCTCATCGTGAACTGCAATATAACAGACACGAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095020.9 ENSMUST00000194296.6 |
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| CDS-3UTR CAA 90 bp | TTTCCTAGAATAGTAAGATTCACAGGGGCTGGGAAAGAGGGAAATGAAGACCATTTGCATTTGCCTGCCTaGCAATTGCAGGGTATGTGT | + |
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Preference number: 5 (lower is better) Translates to: FPRIVRFTGAGKEGNEDHLHLPA*QLQGMC Trigger: ACACATACCCTGCAATTGCAAGGCAGGCAAATGCAA...ATGGTCTTCATTTCCCTCTTTCCCAGCCCCTGTGAATCTTACTATTCTAGGAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194296.6 |
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| CDS CCA 90 bp | TTTCTGGGAAGTAGAGATGACAATTCAGACTGCCCGATTTTCCTATaGGTAATATTTGCTGGTACACATCTGGTGAATTTACGGGACTCC | + |
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Preference number: 5 (lower is better) Translates to: FLGSRDDNSDCPIFL*VIFAGTHLVNLRDS Trigger: GGAGTCCCGTAAATTCACCAGATGTGTACCAGCAAATATTACCCATAGGAAAATCGGGCAGTCTGAATTGTCATCTCTACTTCCCAGAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000095020.9 ENSMUST00000193388.2 ENSMUST00000194296.6 |
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| CDS GCA 90 bp | AATCCAAAGCACAACTTTCTGGGAAGTAGAGATGACAATTCAGACTaGCCGATTTTCCTATGGGTAATATTTGCTGGTACACATCTGGTG | + |
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Preference number: 5 (lower is better) Translates to: NPKHNFLGSRDDNSD*PIFLWVIFAGTHLV Trigger: CACCAGATGTGTACCAGCAAATATTACCCATAGGAAAATCGGGCAGTCTGAATTGTCATCTCTACTTCCCAGAAAGTTGTGCTTTGGATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000095020.9 ENSMUST00000193388.2 ENSMUST00000194296.6 |
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| CDS CCA 90 bp | ATGTTATGTTCACTGTGTACCGAATTTGATCCCTCAAGGACACATTaGTTTCGATTCCTTCCTGGATGCGTTTGGAGTCTTTGTAGTAGT | + |
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Preference number: 5 (lower is better) Translates to: MLCSLCTEFDPSRTH*FRFLPGCVWSLCSS Trigger: ACTACTACAAAGACTCCAAACGCATCCAGGAAGGAATCGAAACCAATGTGTCCTTGAGGGATCAAATTCGGTACACAGTGAACATAACAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095020.9 ENSMUST00000194296.6 |
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| CDS-3UTR CAA 90 bp | TTTCCTAGAATAGTAAGATTCACAGGGGCTGGGAAAGAGGGAAATGAAGACCATACTCTAAGGTGTCTGTaGTTAGATACTGGGCTTTTG | + |
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Preference number: 5 (lower is better) Translates to: FPRIVRFTGAGKEGNEDHTLRCL*LDTGLL Trigger: CAAAAGCCCAGTATCTAACAACAGACACCTTAGAGT...ATGGTCTTCATTTCCCTCTTTCCCAGCCCCTGTGAATCTTACTATTCTAGGAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000194296.6 |
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| CDS-3UTR CAA 90 bp | TTTTTCAGCACCATTGGCCTGACAGAAGTCAGAGATTTCCAGAAAATGTTTACTCTTTTGCTAGGTGTTTaGTACCATGTCAGATTTACT | + |
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Preference number: 5 (lower is better) Translates to: FFSTIGLTEVRDFQKMFTLLLGV*YHVRFT Trigger: AGTAAATCTGACATGGTACAAAACACCTAGCAAAAG...AGTAAACATTTTCTGGAAATCTCTGACTTCTGTCAGGCCAATGGTGCTGAAAAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000194296.6 |
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| CDS CCA 72 bp | CCTGCCTTGCAATTGCAGGGTATGTGTCCCAGCAGCTaGACTGGGGAAGATGCTGGATACCTCCTGGGTGGC | + |
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Preference number: 6 (lower is better) Translates to: PALQLQGMCPSS*TGEDAGYLLGG Trigger: GCCACCCAGGAGGTATCCAGCATCTTCCCCAGTCCAGCTGCTGGGACACATACCCTGCAATTGCAAGGCAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095020.9 ENSMUST00000194296.6 |
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| CDS GCA 72 bp | GGGAGTTATGAGCCCTGTGGCAGCATTGCATTTGCCTaGCTTGCAATTGCAGGGTATGTGTCCCAGCAGCTG | + |
|
Preference number: 6 (lower is better) Translates to: GSYEPCGSIAFA*LAIAGYVSQQL Trigger: CAGCTGCTGGGACACATACCCTGCAATTGCAAGGCAGGCAAATGCAATGCTGCCACAGGGCTCATAACTCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095020.9 ENSMUST00000194296.6 |
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| CDS CCA 72 bp | CTTGCAATTGCAGGGTATGTGTCCCAGCAGCTGGACTaGGGAAGATGCTGGATACCTCCTGGGTGGCATATG | + |
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Preference number: 6 (lower is better) Translates to: LAIAGYVSQQLD*GRCWIPPGWHM Trigger: CATATGCCACCCAGGAGGTATCCAGCATCTTCCCCAGTCCAGCTGCTGGGACACATACCCTGCAATTGCAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095020.9 ENSMUST00000194296.6 |
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| CDS CAA 72 bp | GTTATGAGCCCTGTGGCAGCATTGCATTTGCCTGCCTaGCAATTGCAGGGTATGTGTCCCAGCAGCTGGACT | + |
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Preference number: 6 (lower is better) Translates to: VMSPVAALHLPA*QLQGMCPSSWT Trigger: AGTCCAGCTGCTGGGACACATACCCTGCAATTGCAAGGCAGGCAAATGCAATGCTGCCACAGGGCTCATAAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095020.9 ENSMUST00000194296.6 |
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| CDS GCA 72 bp | GAAGTCTGGAACTGGGTATATCAGAATGATGTAGGCTaGGGACACTCCAGCATGACACGTGAAAGGACGGCC | + |
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Preference number: 6 (lower is better) Translates to: EVWNWVYQNDVG*GHSSMTRERTA Trigger: GGCCGTCCTTTCACGTGTCATGCTGGAGTGTCCGCAGCCTACATCATTCTGATATACCCAGTTCCAGACTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095020.9 ENSMUST00000194296.6 |
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| CDS CCA 72 bp | TCGGGCAAGATCTTCAGTACCAGTGTGTCTACATCATaGCCCTGGCTTCCTCTCGGGTACTTGGGGTATAAG | + |
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Preference number: 6 (lower is better) Translates to: SGKIFSTSVSTS*PWLPLGYLGYK Trigger: CTTATACCCCAAGTACCCGAGAGGAAGCCAGGGCCATGATGTAGACACACTGGTACTGAAGATCTTGCCCGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095020.9 ENSMUST00000194296.6 |
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| CDS CCA 72 bp | TCATACAGCTTCTCATCATCTGGAGCCTGGGCAGTGTaGAAGGCGCTTCTGTACCAAAGCATGATGTCGATC | + |
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Preference number: 6 (lower is better) Translates to: SYSFSSSGAWAV*KALLYQSMMSI Trigger: GATCGACATCATGCTTTGGTACAGAAGCGCCTTCCACACTGCCCAGGCTCCAGATGATGAGAAGCTGTATGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095020.9 ENSMUST00000194296.6 |
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| CDS CCA 72 bp | CAGCTGGACTGGGGAAGATGCTGGATACCTCCTGGGTaGCATATGGTATCTCACTTTCTTCCAGAACTTGGT | + |
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Preference number: 6 (lower is better) Translates to: QLDWGRCWIPPG*HMVSHFLPELG Trigger: ACCAAGTTCTGGAAGAAAGTGAGATACCATATGCCACCCAGGAGGTATCCAGCATCTTCCCCAGTCCAGCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095020.9 ENSMUST00000194296.6 |
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| CDS GCA 72 bp | CCCTCAAGGACACATTGGTTTCGATTCCTTCCTGGATaGGTTTGGAGTCTTTGTAGTAGTCATCCACCAGGG | + |
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Preference number: 6 (lower is better) Translates to: PSRTHWFRFLPG*VWSLCSSHPPG Trigger: CCCTGGTGGATGACTACTACAAAGACTCCAAACGCATCCAGGAAGGAATCGAAACCAATGTGTCCTTGAGGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095020.9 ENSMUST00000194296.6 |
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| CDS CCA 72 bp | TTTGTACCATGTCAGATTTACTGCCCCGTTTGTTTCTaGCGGGTATGTGCAGTTGAAAGGAAAAGGCTGGCC | + |
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Preference number: 6 (lower is better) Translates to: FVPCQIYCPVCF*RVCAVERKRLA Trigger: GGCCAGCCTTTTCCTTTCAACTGCACATACCCGCCAGAAACAAACGGGGCAGTAAATCTGACATGGTACAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000095020.9 ENSMUST00000193388.2 ENSMUST00000194296.6 |
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| CDS CCA 72 bp | TGTCTACATCATGGCCCTGGCTTCCTCTCGGGTACTTaGGGTATAAGACATAGGCATCATACAGCTTCTCAT | + |
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Preference number: 6 (lower is better) Translates to: CLHHGPGFLSGT*GIRHRHHTASH Trigger: ATGAGAAGCTGTATGATGCCTATGTCTTATACCCCAAGTACCCGAGAGGAAGCCAGGGCCATGATGTAGACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095020.9 ENSMUST00000194296.6 |
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| CDS CAA 90 bp | ACTCTCCAGCACCTCAGGTTTGTATTCTCCTTCGTGTCTGTTATATaGCAGTTCACGATGAGGGTGGAGCCAAGTGGAACTTCAATGGAG | + |
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Preference number: 6 (lower is better) Translates to: TLQHLRFVFSFVSVI*QFTMRVEPSGTSME Trigger: CTCCATTGAAGTTCCACTTGGCTCCACCCTCATCGTGAACTGCAATATAACAGACACGAAGGAGAATACAAACCTGAGGTGCTGGAGAGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095020.9 ENSMUST00000194296.6 |
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| CDS TCA 72 bp | TTACTGCCCCGTTTGTTTCTGGCGGGTATGTGCAGTTaGAAGGAAAAGGCTGGCCCTCTGAAATTATCACAT | + |
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Preference number: 6 (lower is better) Translates to: LLPRLFLAGMCS*KEKAGPLKLSH Trigger: ATGTGATAATTTCAGAGGGCCAGCCTTTTCCTTTCAACTGCACATACCCGCCAGAAACAAACGGGGCAGTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000095020.9 ENSMUST00000193388.2 ENSMUST00000194296.6 |
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| CDS CCA 72 bp | AGGACACATTGGTTTCGATTCCTTCCTGGATGCGTTTaGAGTCTTTGTAGTAGTCATCCACCAGGGTGTTGT | + |
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Preference number: 6 (lower is better) Translates to: RTHWFRFLPGCV*SLCSSHPPGCC Trigger: ACAACACCCTGGTGGATGACTACTACAAAGACTCCAAACGCATCCAGGAAGGAATCGAAACCAATGTGTCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095020.9 ENSMUST00000194296.6 |
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| CDS CAA 72 bp | TTTACTGCCCCGTTTGTTTCTGGCGGGTATGTGCAGTaGAAAGGAAAAGGCTGGCCCTCTGAAATTATCACA | + |
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Preference number: 6 (lower is better) Translates to: FTAPFVSGGYVQ*KGKGWPSEIIT Trigger: TGTGATAATTTCAGAGGGCCAGCCTTTTCCTTTCAACTGCACATACCCGCCAGAAACAAACGGGGCAGTAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000095020.9 ENSMUST00000193388.2 ENSMUST00000194296.6 |
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| CDS CAA 72 bp | CACCTCAGGTTTGTATTCTCCTTCGTGTCTGTTATATaGCAGTTCACGATGAGGGTGGAGCCAAGTGGAACT | + |
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Preference number: 6 (lower is better) Translates to: HLRFVFSFVSVI*QFTMRVEPSGT Trigger: AGTTCCACTTGGCTCCACCCTCATCGTGAACTGCAATATAACAGACACGAAGGAGAATACAAACCTGAGGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095020.9 ENSMUST00000194296.6 |
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| CDS CAA 90 bp | CATGTCAGATTTACTGCCCCGTTTGTTTCTGGCGGGTATGTGCAGTaGAAAGGAAAAGGCTGGCCCTCTGAAATTATCACATTGTGCATA | + |
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Preference number: 6 (lower is better) Translates to: HVRFTAPFVSGGYVQ*KGKGWPSEIITLCI Trigger: TATGCACAATGTGATAATTTCAGAGGGCCAGCCTTTTCCTTTCAACTGCACATACCCGCCAGAAACAAACGGGGCAGTAAATCTGACATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000095020.9 ENSMUST00000193388.2 ENSMUST00000194296.6 |
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| CDS CAA 90 bp | TTGCAGTTCACGATGAGGGTGGAGCCAAGTGGAACTTCAATGGAGTaGTTCTTTGGATACGTGATGTTAGGGATCCTTCTTCCATACTCA | + |
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Preference number: 6 (lower is better) Translates to: LQFTMRVEPSGTSME*FFGYVMLGILLPYS Trigger: TGAGTATGGAAGAAGGATCCCTAACATCACGTATCCAAAGAACAACTCCATTGAAGTTCCACTTGGCTCCACCCTCATCGTGAACTGCAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095020.9 ENSMUST00000194296.6 |
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| CDS GCA 72 bp | CAATTCAGACTGCCCGATTTTCCTATGGGTAATATTTaGTGGTACACATCTGGTGAATTTACGGGACTCCCC | + |
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Preference number: 6 (lower is better) Translates to: QFRLPDFPMGNI*WYTSGEFTGLP Trigger: GGGGAGTCCCGTAAATTCACCAGATGTGTACCAGCAAATATTACCCATAGGAAAATCGGGCAGTCTGAATTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000095020.9 ENSMUST00000193388.2 ENSMUST00000194296.6 |
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| CDS CCA 72 bp | GGTGGAGCCAAGTGGAACTTCAATGGAGTTGTTCTTTaGATACGTGATGTTAGGGATCCTTCTTCCATACTC | + |
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Preference number: 6 (lower is better) Translates to: GGAKWNFNGVVL*IRDVRDPSSIL Trigger: GAGTATGGAAGAAGGATCCCTAACATCACGTATCCAAAGAACAACTCCATTGAAGTTCCACTTGGCTCCACC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095020.9 ENSMUST00000194296.6 |
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| CDS CCA 72 bp | TCACTGTGTACCGAATTTGATCCCTCAAGGACACATTaGTTTCGATTCCTTCCTGGATGCGTTTGGAGTCTT | + |
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Preference number: 6 (lower is better) Translates to: SLCTEFDPSRTH*FRFLPGCVWSL Trigger: AAGACTCCAAACGCATCCAGGAAGGAATCGAAACCAATGTGTCCTTGAGGGATCAAATTCGGTACACAGTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095020.9 ENSMUST00000194296.6 |
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| CDS CAA 90 bp | ACTCTAAGGTGTCTGTTGTTAGATACTGGGCTTTTGCTAGGTGTTTaGTACCATGTCAGATTTACTGCCCCGTTTGTTTCTGGCGGGTAT | + |
|
Preference number: 6 (lower is better) Translates to: TLRCLLLDTGLLLGV*YHVRFTAPFVSGGY Trigger: ATACCCGCCAGAAACAAACGGGGCAGTAAATCTGACATGGTACAAAACACCTAGCAAAAGCCCAGTATCTAACAACAGACACCTTAGAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000095020.9 ENSMUST00000193388.2 ENSMUST00000194296.6 |
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| CDS TCA 72 bp | TATTCTCCTTCGTGTCTGTTATATTGCAGTTCACGATaGGGGTGGAGCCAAGTGGAACTTCAATGGAGTTGT | + |
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Preference number: 6 (lower is better) Translates to: YSPSCLLYCSSR*GWSQVELQWSC Trigger: ACAACTCCATTGAAGTTCCACTTGGCTCCACCCTCATCGTGAACTGCAATATAACAGACACGAAGGAGAATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095020.9 ENSMUST00000194296.6 |
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| CDS CCA 72 bp | GTTTCTGGCGGGTATGTGCAGTTGAAAGGAAAAGGCTaGCCCTCTGAAATTATCACATTGTGCATAAAAATG | + |
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Preference number: 6 (lower is better) Translates to: VSGGYVQLKGKG*PSEIITLCIKM Trigger: CATTTTTATGCACAATGTGATAATTTCAGAGGGCCAGCCTTTTCCTTTCAACTGCACATACCCGCCAGAAAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000095020.9 ENSMUST00000193388.2 ENSMUST00000194296.6 |
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| CDS CCA 72 bp | GTCCTGGTGAACTCTAAGGTGTCTGTTGTTAGATACTaGGCTTTTGCTAGGTGTTTTGTACCATGTCAGATT | + |
|
Preference number: 6 (lower is better) Translates to: VLVNSKVSVVRY*AFARCFVPCQI Trigger: AATCTGACATGGTACAAAACACCTAGCAAAAGCCCAGTATCTAACAACAGACACCTTAGAGTTCACCAGGAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000095020.9 ENSMUST00000193388.2 ENSMUST00000194296.6 |
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| CDS CAA 72 bp | TGTCTGTTGTTAGATACTGGGCTTTTGCTAGGTGTTTaGTACCATGTCAGATTTACTGCCCCGTTTGTTTCT | + |
|
Preference number: 6 (lower is better) Translates to: CLLLDTGLLLGV*YHVRFTAPFVS Trigger: AGAAACAAACGGGGCAGTAAATCTGACATGGTACAAAACACCTAGCAAAAGCCCAGTATCTAACAACAGACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000095020.9 ENSMUST00000193388.2 ENSMUST00000194296.6 |
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| CDS TCA 72 bp | ACTTTTAAGAATGTTATGTTCACTGTGTACCGAATTTaGTCCCTCAAGGACACATTGGTTTCGATTCCTTCC | + |
|
Preference number: 6 (lower is better) Translates to: TFKNVMFTVYRI*SLKDTLVSIPS Trigger: GGAAGGAATCGAAACCAATGTGTCCTTGAGGGATCAAATTCGGTACACAGTGAACATAACATTCTTAAAAGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095020.9 ENSMUST00000194296.6 |
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| CDS CCA 72 bp | AGTAGAGATGACAATTCAGACTGCCCGATTTTCCTATaGGTAATATTTGCTGGTACACATCTGGTGAATTTA | + |
|
Preference number: 6 (lower is better) Translates to: SRDDNSDCPIFL*VIFAGTHLVNL Trigger: TAAATTCACCAGATGTGTACCAGCAAATATTACCCATAGGAAAATCGGGCAGTCTGAATTGTCATCTCTACT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000095020.9 ENSMUST00000193388.2 ENSMUST00000194296.6 |
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| CDS TCA 72 bp | CGCTTTAATCTCTTCACAACCCTTATACCATTTTATTaGATCCAAAGCACAACTTTCTGGGAAGTAGAGATG | + |
|
Preference number: 6 (lower is better) Translates to: RFNLFTTLIPFY*IQSTTFWEVEM Trigger: CATCTCTACTTCCCAGAAAGTTGTGCTTTGGATTCAATAAAATGGTATAAGGGTTGTGAAGAGATTAAAGCG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095020.9 ENSMUST00000194296.6 |
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