Pregenerated sensors for IL1RAPL2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000059203Ensembl transcript IDs: ENSMUST00000075471.4, ENSMUST00000113063.8
Found 105 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | AAATACTGTTTAAATGCTAAGTATGGGCAGTCCATATGGTGCCATAAAACCTACCAAATCTGTACATTGTaGCAAGGTGCCACACTACAA | + |
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Preference number: 2 (lower is better) Translates to: KYCLNAKYGQSIWCHKTYQICTL*QGATLQ Trigger: TTGTAGTGTGGCACCTTGTCACAATGTACAGATTTG...GTAGGTTTTATGGCACCATATGGACTGCCCATACTTAGCATTTAAACAGTATTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113063.8 |
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| 3UTR-3UTR GCA 90 bp | GGGCAGTCCATATGGTGCCATAAAACCTACTTGAAAAGGACACAATTCAATTTTTACATTGTGACAAGGTaGCACACTACAAAAGCAAGA | + |
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Preference number: 2 (lower is better) Translates to: GQSIWCHKTYLKRTQFNFYIVTR*HTTKAR Trigger: TCTTGCTTTTGTAGTGTGGCACCTTGTCACAATGTA...AAAATTGAATTGTGTCCTTTTCAAGTAGGTTTTATGGCACCATATGGACTGCCC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000113063.8 |
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| 3UTR CCA 72 bp | AAATACTGTTTAAATGCTAAGTATGGGCAGTCCATATaGTGCCATAAAACCTACTTGAAAAGGACACAATTC | + |
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Preference number: 3 (lower is better) Translates to: KYCLNAKYGQSI*CHKTYLKRTQF Trigger: GAATTGTGTCCTTTTCAAGTAGGTTTTATGGCACCATATGGACTGCCCATACTTAGCATTTAAACAGTATTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113063.8 |
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| CDS-3UTR TCA 90 bp | GGGCAGTCCATATGGTGCCATAAAACCTACTTGAAAAGGACACAATTCAATTTTGGGGTAGCTGTCCATTaGGTAGTGTCAGTGGCAAGT | + |
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Preference number: 4 (lower is better) Translates to: GQSIWCHKTYLKRTQFNFGVAVH*VVSVAS Trigger: ACTTGCCACTGACACTACTCAATGGACAGCTACCCC...AAAATTGAATTGTGTCCTTTTCAAGTAGGTTTTATGGCACCATATGGACTGCCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000113063.8 |
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| CDS-3UTR CCA 90 bp | GGGCAGTCCATATGGTGCCATAAAACCTACTTGAAAAGGACACAATTCAATTTTGCTGGCATCTCGTGTTaGTATCCTCTGCAACAGTGC | + |
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Preference number: 4 (lower is better) Translates to: GQSIWCHKTYLKRTQFNFAGISC*YPLQQC Trigger: GCACTGTTGCAGAGGATACCAACACGAGATGCCAGC...AAAATTGAATTGTGTCCTTTTCAAGTAGGTTTTATGGCACCATATGGACTGCCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000113063.8 |
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| CDS-3UTR TCA 90 bp | TCTCACTGTAGCCGAAATTTCATATTCTCATATAGCTGTTCTGAGGAGTTGAGATGTTCCTCAGCTGAGTaGAACCATATGGCGTCTTCC | + |
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Preference number: 4 (lower is better) Translates to: SHCSRNFIFSYSCSEELRCSSAE*NHMASS Trigger: GGAAGACGCCATATGGTTTCACTCAGCTGAGGAACA...TCTCAACTCCTCAGAACAGCTATATGAGAATATGAAATTTCGGCTACAGTGAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113063.8 |
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| CDS-3UTR TCA 90 bp | TCTCACTGTAGCCGAAATTTCATATTCTCATATAGCTGTTCTGAGGAGTTGAGAGTCTTGTTCCTCAGCTaGGTGAAACCATATGGCGTC | + |
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Preference number: 4 (lower is better) Translates to: SHCSRNFIFSYSCSEELRVLFLS*VKPYGV Trigger: GACGCCATATGGTTTCACTCAGCTGAGGAACAAGAC...TCTCAACTCCTCAGAACAGCTATATGAGAATATGAAATTTCGGCTACAGTGAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113063.8 |
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| CDS-3UTR GCA 90 bp | AAATACTGTTTAAATGCTAAGTATGGGCAGTCCATATGGTGCCATAAAACCTACTCAGGGAGATCAGCTTaGGATGGCACCATTGTGGCT | + |
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Preference number: 4 (lower is better) Translates to: KYCLNAKYGQSIWCHKTYSGRSA*DGTIVA Trigger: AGCCACAATGGTGCCATCGCAAGCTGATCTCCCTGA...GTAGGTTTTATGGCACCATATGGACTGCCCATACTTAGCATTTAAACAGTATTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113063.8 |
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| CDS-3UTR TCA 90 bp | GGGCAGTCCATATGGTGCCATAAAACCTACTTGAAAAGGACACAATTCAATTTTACTCATCCTGACCTCTaGAAAGATGATGGGCTCTTC | + |
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Preference number: 4 (lower is better) Translates to: GQSIWCHKTYLKRTQFNFTHPDL*KDDGLF Trigger: GAAGAGCCCATCATCTTTTCAGAGGTCAGGATGAGT...AAAATTGAATTGTGTCCTTTTCAAGTAGGTTTTATGGCACCATATGGACTGCCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000113063.8 |
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| CDS-3UTR GCA 90 bp | GGGCAGTCCATATGGTGCCATAAAACCTACTTGAAAAGGACACAATTCAATTTTTCGGACAGGTTCACCTaGCAAAGCCATGTATGTCTT | + |
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Preference number: 4 (lower is better) Translates to: GQSIWCHKTYLKRTQFNFSDRFT*QSHVCL Trigger: AAGACATACATGGCTTTGGCAGGTGAACCTGTCCGA...AAAATTGAATTGTGTCCTTTTCAAGTAGGTTTTATGGCACCATATGGACTGCCC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000113063.8 |
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| CDS-3UTR GCA 90 bp | TCTCACTGTAGCCGAAATTTCATATTCTCATATAGCTGTTCTGAGGAGTTGAGACGTGTTGGTATCCTCTaGAACAGTGCCTCATTTGCA | + |
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Preference number: 4 (lower is better) Translates to: SHCSRNFIFSYSCSEELRRVGIL*NSASFA Trigger: TGCAAATGAGGCACTGTTGCAGAGGATACCAACACG...TCTCAACTCCTCAGAACAGCTATATGAGAATATGAAATTTCGGCTACAGTGAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113063.8 |
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| CDS-3UTR CCA 90 bp | TCTCACTGTAGCCGAAATTTCATATTCTCATATAGCTGTTCTGAGGAGTTGAGAGGGCCATGCTGTAGTTaGTGCGGATATAACTGTAGA | + |
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Preference number: 4 (lower is better) Translates to: SHCSRNFIFSYSCSEELRGPCCS*CGYNCR Trigger: TCTACAGTTATATCCGCACCAACTACAGCATGGCCC...TCTCAACTCCTCAGAACAGCTATATGAGAATATGAAATTTCGGCTACAGTGAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113063.8 |
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| CDS-3UTR CCA 90 bp | AAATACTGTTTAAATGCTAAGTATGGGCAGTCCATATGGTGCCATAAAACCTACTTCCATGGGGAACAATaGCTTGGGAGGCTTGTCTGT | + |
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Preference number: 4 (lower is better) Translates to: KYCLNAKYGQSIWCHKTYFHGEQ*LGRLVC Trigger: ACAGACAAGCCTCCCAAGCCATTGTTCCCCATGGAA...GTAGGTTTTATGGCACCATATGGACTGCCCATACTTAGCATTTAAACAGTATTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113063.8 |
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| CDS-3UTR CCA 90 bp | GGGCAGTCCATATGGTGCCATAAAACCTACTTGAAAAGGACACAATTCAATTTTTTGGCTGATTTTCCATaGGGAACAATGGCTTGGGAG | + |
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Preference number: 4 (lower is better) Translates to: GQSIWCHKTYLKRTQFNFLADFP*GTMAWE Trigger: CTCCCAAGCCATTGTTCCCCATGGAAAATCAGCCAA...AAAATTGAATTGTGTCCTTTTCAAGTAGGTTTTATGGCACCATATGGACTGCCC 42% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000113063.8 |
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| CDS-3UTR CCA 90 bp | GGGCAGTCCATATGGTGCCATAAAACCTACTTGAAAAGGACACAATTCAATTTTCATCCAGTAGATCATTaGTCCAGACTCCCCACTGAA | + |
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Preference number: 4 (lower is better) Translates to: GQSIWCHKTYLKRTQFNFHPVDH*SRLPTE Trigger: TTCAGTGGGGAGTCTGGACCAATGATCTACTGGATG...AAAATTGAATTGTGTCCTTTTCAAGTAGGTTTTATGGCACCATATGGACTGCCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000113063.8 |
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| CDS-3UTR CCA 90 bp | TCTCACTGTAGCCGAAATTTCATATTCTCATATAGCTGTTCTGAGGAGTTGAGATTCGCAGTAGAACACTaGCGTGTTTCCGTCCATTTC | + |
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Preference number: 4 (lower is better) Translates to: SHCSRNFIFSYSCSEELRFAVEH*RVSVHF Trigger: GAAATGGACGGAAACACGCCAGTGTTCTACTGCGAA...TCTCAACTCCTCAGAACAGCTATATGAGAATATGAAATTTCGGCTACAGTGAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113063.8 |
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| CDS-3UTR TCA 90 bp | TCTCACTGTAGCCGAAATTTCATATTCTCATATAGCTGTTCTGAGGAGTTGAGAATCCATGTCTGGGCATaGGATCTCCTTTCTTTTGGT | + |
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Preference number: 4 (lower is better) Translates to: SHCSRNFIFSYSCSEELRIHVWA*DLLSFG Trigger: ACCAAAAGAAAGGAGATCTCATGCCCAGACATGGAT...TCTCAACTCCTCAGAACAGCTATATGAGAATATGAAATTTCGGCTACAGTGAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113063.8 |
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| CDS-3UTR TCA 90 bp | GGGCAGTCCATATGGTGCCATAAAACCTACTTGAAAAGGACACAATTCAATTTTACTCGTCATGGCAATTaGAGGTATAGGCTGAAGTTC | + |
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Preference number: 4 (lower is better) Translates to: GQSIWCHKTYLKRTQFNFTRHGN*RYRLKF Trigger: GAACTTCAGCCTATACCTTCAATTGCCATGACGAGT...AAAATTGAATTGTGTCCTTTTCAAGTAGGTTTTATGGCACCATATGGACTGCCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000113063.8 |
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| CDS-3UTR TCA 90 bp | TCTCACTGTAGCCGAAATTTCATATTCTCATATAGCTGTTCTGAGGAGTTGAGATGCATTGAATCCGAATaGTGGAACTCAGGGAGATCA | + |
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Preference number: 4 (lower is better) Translates to: SHCSRNFIFSYSCSEELRCIESE*WNSGRS Trigger: TGATCTCCCTGAGTTCCATCATTCGGATTCAATGCA...TCTCAACTCCTCAGAACAGCTATATGAGAATATGAAATTTCGGCTACAGTGAGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113063.8 |
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| CDS-3UTR GCA 90 bp | ATTTATTCTCACTGTAGCCGAAATTTCATATTCTCATATAGCTGTTCTGAGGAGCTAAGTAGCGGATCCTaGTATTGTAGCACAGGCCTG | + |
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Preference number: 4 (lower is better) Translates to: IYSHCSRNFIFSYSCSEELSSGS*YCSTGL Trigger: CAGGCCTGTGCTACAATAGCAGGATCCGCTACTTAG...CTCCTCAGAACAGCTATATGAGAATATGAAATTTCGGCTACAGTGAGAATAAAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113063.8 |
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| CDS-3UTR CCA 90 bp | GGGCAGTCCATATGGTGCCATAAAACCTACTTGAAAAGGACACAATTCAATTTTCTGACTAGCATGTTATaGAGTCTGCTTTCCAGTTCG | + |
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Preference number: 4 (lower is better) Translates to: GQSIWCHKTYLKRTQFNFLTSML*SLLSSS Trigger: CGAACTGGAAAGCAGACTCCATAACATGCTAGTCAG...AAAATTGAATTGTGTCCTTTTCAAGTAGGTTTTATGGCACCATATGGACTGCCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000113063.8 |
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| CDS-3UTR TCA 90 bp | AAATACTGTTTAAATGCTAAGTATGGGCAGTCCATATGGTGCCATAAAACCTACAAGCCATGTATGTCTTaGGATCCACCGACCAATCAA | + |
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Preference number: 4 (lower is better) Translates to: KYCLNAKYGQSIWCHKTYKPCMS*DPPTNQ Trigger: TTGATTGGTCGGTGGATCTCAAGACATACATGGCTT...GTAGGTTTTATGGCACCATATGGACTGCCCATACTTAGCATTTAAACAGTATTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113063.8 |
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| CDS-3UTR TCA 90 bp | TCTCACTGTAGCCGAAATTTCATATTCTCATATAGCTGTTCTGAGGAGTTGAGATCACCTTCTCTAATGTaGCCTGCCAGTTCTTCAATA | + |
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Preference number: 4 (lower is better) Translates to: SHCSRNFIFSYSCSEELRSPSLM*PASSSI Trigger: TATTGAAGAACTGGCAGGTCACATTAGAGAAGGTGA...TCTCAACTCCTCAGAACAGCTATATGAGAATATGAAATTTCGGCTACAGTGAGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113063.8 |
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| CDS-3UTR TCA 90 bp | AAATACTGTTTAAATGCTAAGTATGGGCAGTCCATATGGTGCCATAAAACCTACTACTCCATCCCCGTCTaGGAATATAGTCTGGAGTTA | + |
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Preference number: 4 (lower is better) Translates to: KYCLNAKYGQSIWCHKTYYSIPV*EYSLEL Trigger: TAACTCCAGACTATATTCTCAGACGGGGATGGAGTA...GTAGGTTTTATGGCACCATATGGACTGCCCATACTTAGCATTTAAACAGTATTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113063.8 |
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| CDS-3UTR GCA 90 bp | ATTTATTCTCACTGTAGCCGAAATTTCATATTCTCATATAGCTGTTCTGAGGAGCAAATTTGTACTGACTaGAGAACAGACCACCAGGGC | + |
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Preference number: 4 (lower is better) Translates to: IYSHCSRNFIFSYSCSEEQICTD*RTDHQG Trigger: GCCCTGGTGGTCTGTTCTGCAGTCAGTACAAATTTG...CTCCTCAGAACAGCTATATGAGAATATGAAATTTCGGCTACAGTGAGAATAAAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113063.8 |
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| CDS-3UTR GCA 90 bp | GGGCAGTCCATATGGTGCCATAAAACCTACTTGAAAAGGACACAATTCAATTTTTATCCTCTGCAACAGTaGCTCATTTGCATTGAATCC | + |
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Preference number: 4 (lower is better) Translates to: GQSIWCHKTYLKRTQFNFYPLQQ*LICIES Trigger: GGATTCAATGCAAATGAGGCACTGTTGCAGAGGATA...AAAATTGAATTGTGTCCTTTTCAAGTAGGTTTTATGGCACCATATGGACTGCCC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000113063.8 |
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| CDS-3UTR CCA 90 bp | GGGCAGTCCATATGGTGCCATAAAACCTACTTGAAAAGGACACAATTCAATTTTCTGAGTGAAACCATATaGCGTCTTCCTCTTTACTCA | + |
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Preference number: 4 (lower is better) Translates to: GQSIWCHKTYLKRTQFNFLSETI*RLPLYS Trigger: TGAGTAAAGAGGAAGACGCCATATGGTTTCACTCAG...AAAATTGAATTGTGTCCTTTTCAAGTAGGTTTTATGGCACCATATGGACTGCCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000113063.8 |
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| CDS-3UTR TCA 90 bp | GGGCAGTCCATATGGTGCCATAAAACCTACTTGAAAAGGACACAATTCAATTTTAACAGTCAAGGACATTaGCACCTTCATGCAATATGT | + |
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Preference number: 4 (lower is better) Translates to: GQSIWCHKTYLKRTQFNFNSQGH*HLHAIC Trigger: ACATATTGCATGAAGGTGTCAATGTCCTTGACTGTT...AAAATTGAATTGTGTCCTTTTCAAGTAGGTTTTATGGCACCATATGGACTGCCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000113063.8 |
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| CDS-3UTR TCA 90 bp | ATTTATTCTCACTGTAGCCGAAATTTCATATTCTCATATAGCTGTTCTGAGGAGATTGTAGCACAGGCCTaGTTCATTCTCTGCAACAGT | + |
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Preference number: 4 (lower is better) Translates to: IYSHCSRNFIFSYSCSEEIVAQA*FILCNS Trigger: ACTGTTGCAGAGAATGAATCAGGCCTGTGCTACAAT...CTCCTCAGAACAGCTATATGAGAATATGAAATTTCGGCTACAGTGAGAATAAAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113063.8 |
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| CDS-3UTR TCA 90 bp | AAATACTGTTTAAATGCTAAGTATGGGCAGTCCATATGGTGCCATAAAACCTACCCTCCATCTTCTTCTTaGACTTCTTGGATGAGAAGA | + |
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Preference number: 4 (lower is better) Translates to: KYCLNAKYGQSIWCHKTYPPSSS*TSWMRR Trigger: TCTTCTCATCCAAGAAGTTCAAGAAGAAGATGGAGG...GTAGGTTTTATGGCACCATATGGACTGCCCATACTTAGCATTTAAACAGTATTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113063.8 |
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| CDS-3UTR TCA 90 bp | ATTTATTCTCACTGTAGCCGAAATTTCATATTCTCATATAGCTGTTCTGAGGAGCTCCAAGATGCTCTTTaGGGAGCCTTATTTCACCTT | + |
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Preference number: 4 (lower is better) Translates to: IYSHCSRNFIFSYSCSEELQDAL*GALFHL Trigger: AAGGTGAAATAAGGCTCCTCAAAGAGCATCTTGGAG...CTCCTCAGAACAGCTATATGAGAATATGAAATTTCGGCTACAGTGAGAATAAAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113063.8 |
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| CDS-3UTR TCA 90 bp | ATTTATTCTCACTGTAGCCGAAATTTCATATTCTCATATAGCTGTTCTGAGGAGATTGAAGGTATAGGCTaGAGTTCTCCAAAAAGCCCC | + |
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Preference number: 4 (lower is better) Translates to: IYSHCSRNFIFSYSCSEEIEGIG*SSPKSP Trigger: GGGGCTTTTTGGAGAACTTCAGCCTATACCTTCAAT...CTCCTCAGAACAGCTATATGAGAATATGAAATTTCGGCTACAGTGAGAATAAAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000113063.8 |
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| CDS-3UTR GCA 90 bp | TCTCACTGTAGCCGAAATTTCATATTCTCATATAGCTGTTCTGAGGAGTTGAGATCCACATTTTTGGCTTaGATTCCTTGTACCATACGA | + |
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Preference number: 4 (lower is better) Translates to: SHCSRNFIFSYSCSEELRSTFLA*IPCTIR Trigger: TCGTATGGTACAAGGAATGCAAGCCAAAAATGTGGA...TCTCAACTCCTCAGAACAGCTATATGAGAATATGAAATTTCGGCTACAGTGAGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000113063.8 |
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| CDS-3UTR GCA 90 bp | GGGCAGTCCATATGGTGCCATAAAACCTACTTGAAAAGGACACAATTCAATTTTATAAGTCGTCTGCTTTaGTCAACACATCTTGTGAGA | + |
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Preference number: 4 (lower is better) Translates to: GQSIWCHKTYLKRTQFNFISRLL*STHLVR Trigger: TCTCACAAGATGTGTTGAGCAAAGCAGACGACTTAT...AAAATTGAATTGTGTCCTTTTCAAGTAGGTTTTATGGCACCATATGGACTGCCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000113063.8 |
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| CDS-3UTR GCA 90 bp | TCTCACTGTAGCCGAAATTTCATATTCTCATATAGCTGTTCTGAGGAGTTGAGAGCATGTTATGGAGTCTaGTTTCCAGTTCGAAAATAC | + |
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Preference number: 4 (lower is better) Translates to: SHCSRNFIFSYSCSEELRACYGV*FPVRKY Trigger: GTATTTTCGAACTGGAAAGCAGACTCCATAACATGC...TCTCAACTCCTCAGAACAGCTATATGAGAATATGAAATTTCGGCTACAGTGAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113063.8 |
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| CDS-3UTR CCA 90 bp | AAATACTGTTTAAATGCTAAGTATGGGCAGTCCATATGGTGCCATAAAACCTACGCTTCTCCACATTTTTaGCTTGCATTCCTTGTACCA | + |
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Preference number: 4 (lower is better) Translates to: KYCLNAKYGQSIWCHKTYASPHF*LAFLVP Trigger: TGGTACAAGGAATGCAAGCCAAAAATGTGGAGAAGC...GTAGGTTTTATGGCACCATATGGACTGCCCATACTTAGCATTTAAACAGTATTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000113063.8 |
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| CDS-3UTR CCA 90 bp | ATTTATTCTCACTGTAGCCGAAATTTCATATTCTCATATAGCTGTTCTGAGGAGAGAGGTTTACCCAGCTaGACATCTATAACACTTGGC | + |
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Preference number: 4 (lower is better) Translates to: IYSHCSRNFIFSYSCSEERGLPS*TSITLG Trigger: GCCAAGTGTTATAGATGTCCAGCTGGGTAAACCTCT...CTCCTCAGAACAGCTATATGAGAATATGAAATTTCGGCTACAGTGAGAATAAAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113063.8 |
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| CDS-3UTR TCA 90 bp | ATTTATTCTCACTGTAGCCGAAATTTCATATTCTCATATAGCTGTTCTGAGGAGTCTTCAAATTTGTACTaGCTGCAGAACAGACCACCA | + |
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Preference number: 4 (lower is better) Translates to: IYSHCSRNFIFSYSCSEESSNLY*LQNRPP Trigger: TGGTGGTCTGTTCTGCAGTCAGTACAAATTTGAAGA...CTCCTCAGAACAGCTATATGAGAATATGAAATTTCGGCTACAGTGAGAATAAAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113063.8 |
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| CDS-3UTR TCA 90 bp | ATTTATTCTCACTGTAGCCGAAATTTCATATTCTCATATAGCTGTTCTGAGGAGACGACATCAGGTTCCTaGTCAGACTTCTTAAAGTCA | + |
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Preference number: 4 (lower is better) Translates to: IYSHCSRNFIFSYSCSEETTSGS*SDFLKS Trigger: TGACTTTAAGAAGTCTGATCAGGAACCTGATGTCGT...CTCCTCAGAACAGCTATATGAGAATATGAAATTTCGGCTACAGTGAGAATAAAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113063.8 |
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| CDS-3UTR TCA 90 bp | ATTTATTCTCACTGTAGCCGAAATTTCATATTCTCATATAGCTGTTCTGAGGAGCTTCCACTTGATCAGTaGCAGAAGTTTGATGTTGTG | + |
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Preference number: 4 (lower is better) Translates to: IYSHCSRNFIFSYSCSEELPLDQ*QKFDVV Trigger: CACAACATCAAACTTCTGTCACTGATCAAGTGGAAG...CTCCTCAGAACAGCTATATGAGAATATGAAATTTCGGCTACAGTGAGAATAAAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113063.8 |
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| CDS-3UTR GCA 90 bp | TCTCACTGTAGCCGAAATTTCATATTCTCATATAGCTGTTCTGAGGAGTTGAGAAGAAGTTTGATGTTGTaGTTTAGTGATTCCACTTCC | + |
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Preference number: 4 (lower is better) Translates to: SHCSRNFIFSYSCSEELRRSLML*FSDSTS Trigger: GGAAGTGGAATCACTAAAGCACAACATCAAACTTCT...TCTCAACTCCTCAGAACAGCTATATGAGAATATGAAATTTCGGCTACAGTGAGA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113063.8 |
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| CDS-3UTR CCA 90 bp | TCTCACTGTAGCCGAAATTTCATATTCTCATATAGCTGTTCTGAGGAGTTGAGAAATGAGATCCCTTTCTaGGATGAAGAGTTTATATCC | + |
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Preference number: 4 (lower is better) Translates to: SHCSRNFIFSYSCSEELRNEIPF*DEEFIS Trigger: GGATATAAACTCTTCATCCCAGAAAGGGATCTCATT...TCTCAACTCCTCAGAACAGCTATATGAGAATATGAAATTTCGGCTACAGTGAGA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113063.8 |
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| CDS-3UTR TCA 90 bp | AAATACTGTTTAAATGCTAAGTATGGGCAGTCCATATGGTGCCATAAAACCTACTCAGTGACAGAAGTTTaGTGTTGTGCTTTAGTGATT | + |
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Preference number: 4 (lower is better) Translates to: KYCLNAKYGQSIWCHKTYSVTEV*CCALVI Trigger: AATCACTAAAGCACAACATCAAACTTCTGTCACTGA...GTAGGTTTTATGGCACCATATGGACTGCCCATACTTAGCATTTAAACAGTATTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113063.8 |
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| CDS-3UTR GCA 90 bp | ATTTATTCTCACTGTAGCCGAAATTTCATATTCTCATATAGCTGTTCTGAGGAGCCATGCTGTAGTTGGTaGGGATATAACTGTAGAAAA | + |
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Preference number: 4 (lower is better) Translates to: IYSHCSRNFIFSYSCSEEPCCSW*GYNCRK Trigger: TTTTCTACAGTTATATCCGCACCAACTACAGCATGG...CTCCTCAGAACAGCTATATGAGAATATGAAATTTCGGCTACAGTGAGAATAAAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113063.8 |
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| CDS-3UTR GCA 90 bp | AAATACTGTTTAAATGCTAAGTATGGGCAGTCCATATGGTGCCATAAAACCTACTCTTTTTCTCCAAGATaGTCTTTGAGGAGCCTTATT | + |
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Preference number: 4 (lower is better) Translates to: KYCLNAKYGQSIWCHKTYSFSPR*SLRSLI Trigger: AATAAGGCTCCTCAAAGAGCATCTTGGAGAAAAAGA...GTAGGTTTTATGGCACCATATGGACTGCCCATACTTAGCATTTAAACAGTATTT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000113063.8 |
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| CDS-3UTR CCA 90 bp | TCTCACTGTAGCCGAAATTTCATATTCTCATATAGCTGTTCTGAGGAGTTGAGACCTTCATGCAATATGTaGAGTTTCTTAAAACACAAG | + |
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Preference number: 4 (lower is better) Translates to: SHCSRNFIFSYSCSEELRPSCNM*SFLKHK Trigger: CTTGTGTTTTAAGAAACTCCACATATTGCATGAAGG...TCTCAACTCCTCAGAACAGCTATATGAGAATATGAAATTTCGGCTACAGTGAGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113063.8 |
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| CDS-3UTR CCA 90 bp | ATTTATTCTCACTGTAGCCGAAATTTCATATTCTCATATAGCTGTTCTGAGGAGGACATCTATAACACTTaGCTGATTTTCCATGGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: IYSHCSRNFIFSYSCSEEDIYNT*LIFHGE Trigger: TTCCCCATGGAAAATCAGCCAAGTGTTATAGATGTC...CTCCTCAGAACAGCTATATGAGAATATGAAATTTCGGCTACAGTGAGAATAAAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113063.8 |
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| CDS-3UTR GCA 90 bp | AAATACTGTTTAAATGCTAAGTATGGGCAGTCCATATGGTGCCATAAAACCTACACATTGACACCTTCATaGAATATGTGGAGTTTCTTA | + |
|
Preference number: 4 (lower is better) Translates to: KYCLNAKYGQSIWCHKTYTLTPS*NMWSFL Trigger: TAAGAAACTCCACATATTGCATGAAGGTGTCAATGT...GTAGGTTTTATGGCACCATATGGACTGCCCATACTTAGCATTTAAACAGTATTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113063.8 |
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| CDS CCA 90 bp | TACAGTAAGTGTGGTGGTTGCCTAAGGAGGGTACTGACAGGGTGTTaGCTGGCATCTCGTGTTGGTATCCTCTGCAACAGTGCCTCATTT | + |
|
Preference number: 5 (lower is better) Translates to: YSKCGGCLRRVLTGC*LASRVGILCNSASF Trigger: AAATGAGGCACTGTTGCAGAGGATACCAACACGAGATGCCAGCCAACACCCTGTCAGTACCCTCCTTAGGCAACCACCACACTTACTGTA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075471.4 ENSMUST00000113063.8 |
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| CDS TCA 90 bp | ACCATTGTGGCTGAGGTACTCGTCATGGCAATTGAAGGTATAGGCTaGAGTTCTCCAAAAAGCCCCTGCTCGGCAGAGTCTAGAACATGG | + |
|
Preference number: 5 (lower is better) Translates to: TIVAEVLVMAIEGIG*SSPKSPCSAESRTW Trigger: CCATGTTCTAGACTCTGCCGAGCAGGGGCTTTTTGGAGAACTTCAGCCTATACCTTCAATTGCCATGACGAGTACCTCAGCCACAATGGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000075471.4 ENSMUST00000113063.8 |
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| CDS TCA 90 bp | TGGCATCTCGTGTTGGTATCCTCTGCAACAGTGCCTCATTTGCATTaGATCCGAATGATGGAACTCAGGGAGATCAGCTTGCGATGGCAC | + |
|
Preference number: 5 (lower is better) Translates to: WHLVLVSSATVPHLH*IRMMELREISLRWH Trigger: GTGCCATCGCAAGCTGATCTCCCTGAGTTCCATCATTCGGATTCAATGCAAATGAGGCACTGTTGCAGAGGATACCAACACGAGATGCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075471.4 ENSMUST00000113063.8 |
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| CDS GCA 90 bp | AGGGTACTGACAGGGTGTTGGCTGGCATCTCGTGTTGGTATCCTCTaGAACAGTGCCTCATTTGCATTGAATCCGAATGATGGAACTCAG | + |
|
Preference number: 5 (lower is better) Translates to: RVLTGCWLASRVGIL*NSASFALNPNDGTQ Trigger: CTGAGTTCCATCATTCGGATTCAATGCAAATGAGGCACTGTTGCAGAGGATACCAACACGAGATGCCAGCCAACACCCTGTCAGTACCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075471.4 ENSMUST00000113063.8 |
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| CDS TCA 90 bp | GGGATGTTCAGAGGTTTACCCAGCTGGACATCTATAACACTTGGCTaGTTTTCCATGGGGAACAATGGCTTGGGAGGCTTGTCTGTGAGT | + |
|
Preference number: 5 (lower is better) Translates to: GMFRGLPSWTSITLG*FSMGNNGLGGLSVS Trigger: ACTCACAGACAAGCCTCCCAAGCCATTGTTCCCCATGGAAAATCAGCCAAGTGTTATAGATGTCCAGCTGGGTAAACCTCTGAACATCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000075471.4 ENSMUST00000113063.8 |
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| CDS TCA 90 bp | TGTTGGTATCCTCTGCAACAGTGCCTCATTTGCATTGAATCCGAATaGTGGAACTCAGGGAGATCAGCTTGCGATGGCACCATTGTGGCT | + |
|
Preference number: 5 (lower is better) Translates to: CWYPLQQCLICIESE*WNSGRSACDGTIVA Trigger: AGCCACAATGGTGCCATCGCAAGCTGATCTCCCTGAGTTCCATCATTCGGATTCAATGCAAATGAGGCACTGTTGCAGAGGATACCAACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075471.4 ENSMUST00000113063.8 |
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| CDS TCA 90 bp | AGCCATCCACAGAATTTCTTTTTGACACCATCTTCAAATTTGTACTaGCTGCAGAACAGACCACCAGGGCCAGAAGAAGTGGCAGCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: SHPQNFFLTPSSNLY*LQNRPPGPEEVAAS Trigger: TGAAGCTGCCACTTCTTCTGGCCCTGGTGGTCTGTTCTGCAGTCAGTACAAATTTGAAGATGGTGTCAAAAAGAAATTCTGTGGATGGCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000075471.4 ENSMUST00000113063.8 |
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| CDS GCA 90 bp | GATATAACTGTAGAAAAGGGCACATTTCACTCGGACAGGTTCACCTaGCAAAGCCATGTATGTCTTGAGATCCACCGACCAATCAATGCA | + |
|
Preference number: 5 (lower is better) Translates to: DITVEKGTFHSDRFT*QSHVCLEIHRPINA Trigger: TGCATTGATTGGTCGGTGGATCTCAAGACATACATGGCTTTGGCAGGTGAACCTGTCCGAGTGAAATGTGCCCTTTTCTACAGTTATATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000075471.4 ENSMUST00000113063.8 |
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| CDS-3UTR CAA 90 bp | AAATACTGTTTAAATGCTAAGTATGGGCAGTCCATATGGTGCCATAAAACCTACCTCAGGGAGATCAGCTaGCGATGGCACCATTGTGGC | + |
|
Preference number: 5 (lower is better) Translates to: KYCLNAKYGQSIWCHKTYLREIS*RWHHCG Trigger: GCCACAATGGTGCCATCGCAAGCTGATCTCCCTGAG...GTAGGTTTTATGGCACCATATGGACTGCCCATACTTAGCATTTAAACAGTATTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113063.8 |
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| CDS-3UTR CAA 90 bp | GGGCAGTCCATATGGTGCCATAAAACCTACTTGAAAAGGACACAATTCAATTTTGGCTGGCATCTCGTGTaGGTATCCTCTGCAACAGTG | + |
|
Preference number: 5 (lower is better) Translates to: GQSIWCHKTYLKRTQFNFGWHLV*VSSATV Trigger: CACTGTTGCAGAGGATACCAACACGAGATGCCAGCC...AAAATTGAATTGTGTCCTTTTCAAGTAGGTTTTATGGCACCATATGGACTGCCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000113063.8 |
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| CDS TCA 90 bp | CACATTTTTGGCTTGCATTCCTTGTACCATACGACATCAGGTTCCTaGTCAGACTTCTTAAAGTCATCCATGTCTGGGCATGAGATCTCC | + |
|
Preference number: 5 (lower is better) Translates to: HIFGLHSLYHTTSGS*SDFLKSSMSGHEIS Trigger: GGAGATCTCATGCCCAGACATGGATGACTTTAAGAAGTCTGATCAGGAACCTGATGTCGTATGGTACAAGGAATGCAAGCCAAAAATGTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000075471.4 ENSMUST00000113063.8 |
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| CDS-3UTR CAA 90 bp | TCTCACTGTAGCCGAAATTTCATATTCTCATATAGCTGTTCTGAGGAGTTGAGAATGGGGAACAATGGCTaGGGAGGCTTGTCTGTGAGT | + |
|
Preference number: 5 (lower is better) Translates to: SHCSRNFIFSYSCSEELRMGNNG*GGLSVS Trigger: ACTCACAGACAAGCCTCCCAAGCCATTGTTCCCCAT...TCTCAACTCCTCAGAACAGCTATATGAGAATATGAAATTTCGGCTACAGTGAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113063.8 |
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| CDS-3UTR CAA 90 bp | AAATACTGTTTAAATGCTAAGTATGGGCAGTCCATATGGTGCCATAAAACCTACAGGGGTAGCTGTCCATaGAGTAGTGTCAGTGGCAAG | + |
|
Preference number: 5 (lower is better) Translates to: KYCLNAKYGQSIWCHKTYRGSCP*SSVSGK Trigger: CTTGCCACTGACACTACTCAATGGACAGCTACCCCT...GTAGGTTTTATGGCACCATATGGACTGCCCATACTTAGCATTTAAACAGTATTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113063.8 |
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| CDS GCA 90 bp | CTTTTGGGTCCCTTCCACTTGATCAGTGACAGAAGTTTGATGTTGTaGTTTAGTGATTCCACTTCCTGGCAATTCACCTTCCCTTTTAAT | + |
|
Preference number: 5 (lower is better) Translates to: LLGPFHLISDRSLML*FSDSTSWQFTFPFN Trigger: ATTAAAAGGGAAGGTGAATTGCCAGGAAGTGGAATCACTAAAGCACAACATCAAACTTCTGTCACTGATCAAGTGGAAGGGACCCAAAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000075471.4 ENSMUST00000113063.8 |
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| CDS-3UTR CAA 90 bp | TCTCACTGTAGCCGAAATTTCATATTCTCATATAGCTGTTCTGAGGAGTTGAGATTGGGTCCCTTCCACTaGATCAGTGACAGAAGTTTG | + |
|
Preference number: 5 (lower is better) Translates to: SHCSRNFIFSYSCSEELRLGPFH*ISDRSL Trigger: CAAACTTCTGTCACTGATCAAGTGGAAGGGACCCAA...TCTCAACTCCTCAGAACAGCTATATGAGAATATGAAATTTCGGCTACAGTGAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113063.8 |
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| CDS TCA 90 bp | GTTCTCCACATGGCAGGTATAATTAGCCAAGTCAGCTTCTACCACTaGGTCAAAGATAAGTGTCAACTCAACTTCTTTTTCTCCAAGATG | + |
|
Preference number: 5 (lower is better) Translates to: VLHMAGIISQVSFYH*VKDKCQLNFFFSKM Trigger: CATCTTGGAGAAAAAGAAGTTGAGTTGACACTTATCTTTGACTCAGTGGTAGAAGCTGACTTGGCTAATTATACCTGCCATGTGGAGAAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000075471.4 ENSMUST00000113063.8 |
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| CDS-3UTR CAA 90 bp | GGGCAGTCCATATGGTGCCATAAAACCTACTTGAAAAGGACACAATTCAATTTTAAAGCCATGTATGTCTaGAGATCCACCGACCAATCA | + |
|
Preference number: 5 (lower is better) Translates to: GQSIWCHKTYLKRTQFNFKAMYV*RSTDQS Trigger: TGATTGGTCGGTGGATCTCAAGACATACATGGCTTT...AAAATTGAATTGTGTCCTTTTCAAGTAGGTTTTATGGCACCATATGGACTGCCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000113063.8 |
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| CDS-3UTR CAA 90 bp | GGGCAGTCCATATGGTGCCATAAAACCTACTTGAAAAGGACACAATTCAATTTTCTCCACATTTTTGGCTaGCATTCCTTGTACCATACG | + |
|
Preference number: 5 (lower is better) Translates to: GQSIWCHKTYLKRTQFNFLHIFG*HSLYHT Trigger: CGTATGGTACAAGGAATGCAAGCCAAAAATGTGGAG...AAAATTGAATTGTGTCCTTTTCAAGTAGGTTTTATGGCACCATATGGACTGCCC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000113063.8 |
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| CDS-3UTR CAA 90 bp | TCTCACTGTAGCCGAAATTTCATATTCTCATATAGCTGTTCTGAGGAGTTGAGAGTGAAGCTAAGCTCTTaGGATGTTAATGGCAGTAGG | + |
|
Preference number: 5 (lower is better) Translates to: SHCSRNFIFSYSCSEELRVKLSS*DVNGSR Trigger: CCTACTGCCATTAACATCCAAAGAGCTTAGCTTCAC...TCTCAACTCCTCAGAACAGCTATATGAGAATATGAAATTTCGGCTACAGTGAGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113063.8 |
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| CDS-3UTR CAA 90 bp | TCTCACTGTAGCCGAAATTTCATATTCTCATATAGCTGTTCTGAGGAGTTGAGACAACAGTCAAGGACATaGACACCTTCATGCAATATG | + |
|
Preference number: 5 (lower is better) Translates to: SHCSRNFIFSYSCSEELRQQSRT*TPSCNM Trigger: CATATTGCATGAAGGTGTCAATGTCCTTGACTGTTG...TCTCAACTCCTCAGAACAGCTATATGAGAATATGAAATTTCGGCTACAGTGAGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113063.8 |
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| CDS-3UTR CAA 90 bp | GGGCAGTCCATATGGTGCCATAAAACCTACTTGAAAAGGACACAATTCAATTTTTCCTCCATCTTCTTCTaGAACTTCTTGGATGAGAAG | + |
|
Preference number: 5 (lower is better) Translates to: GQSIWCHKTYLKRTQFNFSSIFF*NFLDEK Trigger: CTTCTCATCCAAGAAGTTCAAGAAGAAGATGGAGGA...AAAATTGAATTGTGTCCTTTTCAAGTAGGTTTTATGGCACCATATGGACTGCCC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000113063.8 |
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| CDS-3UTR CAA 90 bp | AAATACTGTTTAAATGCTAAGTATGGGCAGTCCATATGGTGCCATAAAACCTACTCTCCAAGATGCTCTTaGAGGAGCCTTATTTCACCT | + |
|
Preference number: 5 (lower is better) Translates to: KYCLNAKYGQSIWCHKTYSPRCS*RSLISP Trigger: AGGTGAAATAAGGCTCCTCAAAGAGCATCTTGGAGA...GTAGGTTTTATGGCACCATATGGACTGCCCATACTTAGCATTTAAACAGTATTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113063.8 |
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| CDS-3UTR CAA 90 bp | AAATACTGTTTAAATGCTAAGTATGGGCAGTCCATATGGTGCCATAAAACCTACTCTTCCAAGTCACCTTaGTTTCTATACCACATGAGC | + |
|
Preference number: 5 (lower is better) Translates to: KYCLNAKYGQSIWCHKTYSSKSP*FLYHMS Trigger: GCTCATGTGGTATAGAAACAAAGGTGACTTGGAAGA...GTAGGTTTTATGGCACCATATGGACTGCCCATACTTAGCATTTAAACAGTATTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113063.8 |
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| CDS-3UTR CAA 90 bp | AAATACTGTTTAAATGCTAAGTATGGGCAGTCCATATGGTGCCATAAAACCTACAATCCAAAGAAAGCTTaGCAAGGGATGTTCAGAGGT | + |
|
Preference number: 5 (lower is better) Translates to: KYCLNAKYGQSIWCHKTYNPKKA*QGMFRG Trigger: ACCTCTGAACATCCCTTGCAAAGCTTTCTTTGGATT...GTAGGTTTTATGGCACCATATGGACTGCCCATACTTAGCATTTAAACAGTATTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113063.8 |
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| CDS-3UTR CAA 90 bp | ATTTATTCTCACTGTAGCCGAAATTTCATATTCTCATATAGCTGTTCTGAGGAGGTCTCTTTTAAGGAGTaGTTAAGGGGTAGCTGTCCA | + |
|
Preference number: 5 (lower is better) Translates to: IYSHCSRNFIFSYSCSEEVSFKE*LRGSCP Trigger: TGGACAGCTACCCCTTAACAACTCCTTAAAAGAGAC...CTCCTCAGAACAGCTATATGAGAATATGAAATTTCGGCTACAGTGAGAATAAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113063.8 |
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| CDS CCA 90 bp | ATCAGTGACAGAAGTTTGATGTTGTGCTTTAGTGATTCCACTTCCTaGCAATTCACCTTCCCTTTTAATTCTGTACACTCAATCAAAATC | + |
|
Preference number: 5 (lower is better) Translates to: ISDRSLMLCFSDSTS*QFTFPFNSVHSIKI Trigger: GATTTTGATTGAGTGTACAGAATTAAAAGGGAAGGTGAATTGCCAGGAAGTGGAATCACTAAAGCACAACATCAAACTTCTGTCACTGAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000075471.4 ENSMUST00000113063.8 |
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| CDS-3UTR CAA 90 bp | GGGCAGTCCATATGGTGCCATAAAACCTACTTGAAAAGGACACAATTCAATTTTTATCTTGATCCACTTTaGTGTAAGAGAGATACGCAT | + |
|
Preference number: 5 (lower is better) Translates to: GQSIWCHKTYLKRTQFNFYLDPL*CKRDTH Trigger: ATGCGTATCTCTCTTACACAAAAGTGGATCAAGATA...AAAATTGAATTGTGTCCTTTTCAAGTAGGTTTTATGGCACCATATGGACTGCCC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000113063.8 |
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| CDS-3UTR CAA 90 bp | TCTCACTGTAGCCGAAATTTCATATTCTCATATAGCTGTTCTGAGGAGTTGAGAACAGTCCAAAGTATCTaGATCCACTTTTGTGTAAGA | + |
|
Preference number: 5 (lower is better) Translates to: SHCSRNFIFSYSCSEELRTVQSI*IHFCVR Trigger: TCTTACACAAAAGTGGATCAAGATACTTTGGACTGT...TCTCAACTCCTCAGAACAGCTATATGAGAATATGAAATTTCGGCTACAGTGAGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113063.8 |
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| CDS-3UTR CAA 90 bp | ATTTATTCTCACTGTAGCCGAAATTTCATATTCTCATATAGCTGTTCTGAGGAGGTAGGGGATTGTTCCTaGAAAATTCCTCAGTCTCTT | + |
|
Preference number: 5 (lower is better) Translates to: IYSHCSRNFIFSYSCSEEVGDCS*KIPQSL Trigger: AAGAGACTGAGGAATTTTCAAGGAACAATCCCCTAC...CTCCTCAGAACAGCTATATGAGAATATGAAATTTCGGCTACAGTGAGAATAAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113063.8 |
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| CDS-3UTR CAA 90 bp | ATTTATTCTCACTGTAGCCGAAATTTCATATTCTCATATAGCTGTTCTGAGGAGGCATCATATTCCTTGTaGTCATCAGTAGTTTCATCA | + |
|
Preference number: 5 (lower is better) Translates to: IYSHCSRNFIFSYSCSEEASYSL*SSVVSS Trigger: TGATGAAACTACTGATGACAACAAGGAATATGATGC...CTCCTCAGAACAGCTATATGAGAATATGAAATTTCGGCTACAGTGAGAATAAAT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113063.8 |
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| CDS-3UTR CAA 90 bp | ATTTATTCTCACTGTAGCCGAAATTTCATATTCTCATATAGCTGTTCTGAGGAGTACGCATCATATTCCTaGTTGTCATCAGTAGTTTCA | + |
|
Preference number: 5 (lower is better) Translates to: IYSHCSRNFIFSYSCSEEYASYS*LSSVVS Trigger: TGAAACTACTGATGACAACAAGGAATATGATGCGTA...CTCCTCAGAACAGCTATATGAGAATATGAAATTTCGGCTACAGTGAGAATAAAT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113063.8 |
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| CDS CAA 72 bp | GTGTGGTGGTTGCCTAAGGAGGGTACTGACAGGGTGTaGGCTGGCATCTCGTGTTGGTATCCTCTGCAACAG | + |
|
Preference number: 6 (lower is better) Translates to: VWWLPKEGTDRV*AGISCWYPLQQ Trigger: CTGTTGCAGAGGATACCAACACGAGATGCCAGCCAACACCCTGTCAGTACCCTCCTTAGGCAACCACCACAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075471.4 ENSMUST00000113063.8 |
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| CDS CCA 72 bp | TGTGGTGGTTGCCTAAGGAGGGTACTGACAGGGTGTTaGCTGGCATCTCGTGTTGGTATCCTCTGCAACAGT | + |
|
Preference number: 6 (lower is better) Translates to: CGGCLRRVLTGC*LASRVGILCNS Trigger: ACTGTTGCAGAGGATACCAACACGAGATGCCAGCCAACACCCTGTCAGTACCCTCCTTAGGCAACCACCACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075471.4 ENSMUST00000113063.8 |
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| CDS TCA 72 bp | CTCGGACAGGTTCACCTGCCAAAGCCATGTATGTCTTaGGATCCACCGACCAATCAATGCAGCCATCCACAG | + |
|
Preference number: 6 (lower is better) Translates to: LGQVHLPKPCMS*DPPTNQCSHPQ Trigger: CTGTGGATGGCTGCATTGATTGGTCGGTGGATCTCAAGACATACATGGCTTTGGCAGGTGAACCTGTCCGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075471.4 ENSMUST00000113063.8 |
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| CDS CAA 90 bp | CTCATCCTGACCTCTGAAAAGATGATGGGCTCTTCCAAGTCACCTTaGTTTCTATACCACATGAGCCTGAGCCCGGTACTCTGGGCCATG | + |
|
Preference number: 6 (lower is better) Translates to: LILTSEKMMGSSKSP*FLYHMSLSPVLWAM Trigger: CATGGCCCAGAGTACCGGGCTCAGGCTCATGTGGTATAGAAACAAAGGTGACTTGGAAGAGCCCATCATCTTTTCAGAGGTCAGGATGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000075471.4 ENSMUST00000113063.8 |
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| CDS TCA 72 bp | GCTGAGGTACTCGTCATGGCAATTGAAGGTATAGGCTaGAGTTCTCCAAAAAGCCCCTGCTCGGCAGAGTCT | + |
|
Preference number: 6 (lower is better) Translates to: AEVLVMAIEGIG*SSPKSPCSAES Trigger: AGACTCTGCCGAGCAGGGGCTTTTTGGAGAACTTCAGCCTATACCTTCAATTGCCATGACGAGTACCTCAGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000075471.4 ENSMUST00000113063.8 |
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| CDS TCA 72 bp | CCTCTGCAACAGTGCCTCATTTGCATTGAATCCGAATaGTGGAACTCAGGGAGATCAGCTTGCGATGGCACC | + |
|
Preference number: 6 (lower is better) Translates to: PLQQCLICIESE*WNSGRSACDGT Trigger: GGTGCCATCGCAAGCTGATCTCCCTGAGTTCCATCATTCGGATTCAATGCAAATGAGGCACTGTTGCAGAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075471.4 ENSMUST00000113063.8 |
||
| CDS CCA 72 bp | GAGGGTACTGACAGGGTGTTGGCTGGCATCTCGTGTTaGTATCCTCTGCAACAGTGCCTCATTTGCATTGAA | + |
|
Preference number: 6 (lower is better) Translates to: EGTDRVLAGISC*YPLQQCLICIE Trigger: TTCAATGCAAATGAGGCACTGTTGCAGAGGATACCAACACGAGATGCCAGCCAACACCCTGTCAGTACCCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075471.4 ENSMUST00000113063.8 |
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| CDS CAA 72 bp | ACTCGGACAGGTTCACCTGCCAAAGCCATGTATGTCTaGAGATCCACCGACCAATCAATGCAGCCATCCACA | + |
|
Preference number: 6 (lower is better) Translates to: TRTGSPAKAMYV*RSTDQSMQPST Trigger: TGTGGATGGCTGCATTGATTGGTCGGTGGATCTCAAGACATACATGGCTTTGGCAGGTGAACCTGTCCGAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075471.4 ENSMUST00000113063.8 |
||
| CDS CAA 72 bp | GATGGAACTCAGGGAGATCAGCTTGCGATGGCACCATaGTGGCTGAGGTACTCGTCATGGCAATTGAAGGTA | + |
|
Preference number: 6 (lower is better) Translates to: DGTQGDQLAMAP*WLRYSSWQLKV Trigger: TACCTTCAATTGCCATGACGAGTACCTCAGCCACAATGGTGCCATCGCAAGCTGATCTCCCTGAGTTCCATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075471.4 ENSMUST00000113063.8 |
||
| CDS CAA 90 bp | CTGGCATCTCGTGTTGGTATCCTCTGCAACAGTGCCTCATTTGCATaGAATCCGAATGATGGAACTCAGGGAGATCAGCTTGCGATGGCA | + |
|
Preference number: 6 (lower is better) Translates to: LASRVGILCNSASFA*NPNDGTQGDQLAMA Trigger: TGCCATCGCAAGCTGATCTCCCTGAGTTCCATCATTCGGATTCAATGCAAATGAGGCACTGTTGCAGAGGATACCAACACGAGATGCCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075471.4 ENSMUST00000113063.8 |
||
| CDS CAA 90 bp | GCACATTTCACTCGGACAGGTTCACCTGCCAAAGCCATGTATGTCTaGAGATCCACCGACCAATCAATGCAGCCATCCACAGAATTTCTT | + |
|
Preference number: 6 (lower is better) Translates to: AHFTRTGSPAKAMYV*RSTDQSMQPSTEFL Trigger: AAGAAATTCTGTGGATGGCTGCATTGATTGGTCGGTGGATCTCAAGACATACATGGCTTTGGCAGGTGAACCTGTCCGAGTGAAATGTGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075471.4 ENSMUST00000113063.8 |
||
| CDS TCA 72 bp | GTGTTGGTATCCTCTGCAACAGTGCCTCATTTGCATTaGATCCGAATGATGGAACTCAGGGAGATCAGCTTG | + |
|
Preference number: 6 (lower is better) Translates to: VLVSSATVPHLH*IRMMELREISL Trigger: CAAGCTGATCTCCCTGAGTTCCATCATTCGGATTCAATGCAAATGAGGCACTGTTGCAGAGGATACCAACAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075471.4 ENSMUST00000113063.8 |
||
| CDS CAA 72 bp | CGTGTTGGTATCCTCTGCAACAGTGCCTCATTTGCATaGAATCCGAATGATGGAACTCAGGGAGATCAGCTT | + |
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Preference number: 6 (lower is better) Translates to: RVGILCNSASFA*NPNDGTQGDQL Trigger: AAGCTGATCTCCCTGAGTTCCATCATTCGGATTCAATGCAAATGAGGCACTGTTGCAGAGGATACCAACACG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075471.4 ENSMUST00000113063.8 |
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| CDS TCA 72 bp | CCATATGGCGTCTTCCTCTTTACTCATCCTGACCTCTaGAAAGATGATGGGCTCTTCCAAGTCACCTTTGTT | + |
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Preference number: 6 (lower is better) Translates to: PYGVFLFTHPDL*KDDGLFQVTFV Trigger: AACAAAGGTGACTTGGAAGAGCCCATCATCTTTTCAGAGGTCAGGATGAGTAAAGAGGAAGACGCCATATGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075471.4 ENSMUST00000113063.8 |
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| CDS TCA 72 bp | GGCTTGCATTCCTTGTACCATACGACATCAGGTTCCTaGTCAGACTTCTTAAAGTCATCCATGTCTGGGCAT | + |
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Preference number: 6 (lower is better) Translates to: GLHSLYHTTSGS*SDFLKSSMSGH Trigger: ATGCCCAGACATGGATGACTTTAAGAAGTCTGATCAGGAACCTGATGTCGTATGGTACAAGGAATGCAAGCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075471.4 ENSMUST00000113063.8 |
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| CDS GCA 72 bp | CCCTTCCACTTGATCAGTGACAGAAGTTTGATGTTGTaGTTTAGTGATTCCACTTCCTGGCAATTCACCTTC | + |
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Preference number: 6 (lower is better) Translates to: PFHLISDRSLML*FSDSTSWQFTF Trigger: GAAGGTGAATTGCCAGGAAGTGGAATCACTAAAGCACAACATCAAACTTCTGTCACTGATCAAGTGGAAGGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075471.4 ENSMUST00000113063.8 |
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| CDS CAA 90 bp | AATTTGCTGCTTTTGGGTCCCTTCCACTTGATCAGTGACAGAAGTTaGATGTTGTGCTTTAGTGATTCCACTTCCTGGCAATTCACCTTC | + |
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Preference number: 6 (lower is better) Translates to: NLLLLGPFHLISDRS*MLCFSDSTSWQFTF Trigger: GAAGGTGAATTGCCAGGAAGTGGAATCACTAAAGCACAACATCAAACTTCTGTCACTGATCAAGTGGAAGGGACCCAAAAGCAGCAAATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000075471.4 ENSMUST00000113063.8 |
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| CDS TCA 72 bp | AACACAAGTGTAGAATCCACTGTCTTGTTCCTCAGCTaGGTGAAACCATATGGCGTCTTCCTCTTTACTCAT | + |
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Preference number: 6 (lower is better) Translates to: NTSVESTVLFLS*VKPYGVFLFTH Trigger: ATGAGTAAAGAGGAAGACGCCATATGGTTTCACTCAGCTGAGGAACAAGACAGTGGATTCTACACTTGTGTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075471.4 ENSMUST00000113063.8 |
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| CDS TCA 72 bp | TGCTCTTTGAGGAGCCTTATTTCACCTTCTCTAATGTaGCCTGCCAGTTCTTCAATAAACTTCTCGCCTTTC | + |
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Preference number: 6 (lower is better) Translates to: CSLRSLISPSLM*PASSSINFSPF Trigger: GAAAGGCGAGAAGTTTATTGAAGAACTGGCAGGTCACATTAGAGAAGGTGAAATAAGGCTCCTCAAAGAGCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075471.4 ENSMUST00000113063.8 |
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| CDS CAA 90 bp | TCATACACTAAGTGCTTCCAAAACTTAGAATTTAATTTGCTGCTTTaGGGTCCCTTCCACTTGATCAGTGACAGAAGTTTGATGTTGTGC | + |
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Preference number: 6 (lower is better) Translates to: SYTKCFQNLEFNLLL*GPFHLISDRSLMLC Trigger: GCACAACATCAAACTTCTGTCACTGATCAAGTGGAAGGGACCCAAAAGCAGCAAATTAAATTCTAAGTTTTGGAAGCACTTAGTGTATGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000075471.4 ENSMUST00000113063.8 |
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| CDS TCA 72 bp | ATGGCAGGTATAATTAGCCAAGTCAGCTTCTACCACTaGGTCAAAGATAAGTGTCAACTCAACTTCTTTTTC | + |
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Preference number: 6 (lower is better) Translates to: MAGIISQVSFYH*VKDKCQLNFFF Trigger: GAAAAAGAAGTTGAGTTGACACTTATCTTTGACTCAGTGGTAGAAGCTGACTTGGCTAATTATACCTGCCAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000075471.4 ENSMUST00000113063.8 |
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| CDS CAA 72 bp | TCATACACTAAGTGCTTCCAAAACTTAGAATTTAATTaGCTGCTTTTGGGTCCCTTCCACTTGATCAGTGAC | + |
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Preference number: 6 (lower is better) Translates to: SYTKCFQNLEFN*LLLGPFHLISD Trigger: GTCACTGATCAAGTGGAAGGGACCCAAAAGCAGCAAATTAAATTCTAAGTTTTGGAAGCACTTAGTGTATGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000075471.4 ENSMUST00000113063.8 |
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| CDS CAA 90 bp | TTCCAAAACTTAGAATTTAATTTGCTGCTTTTGGGTCCCTTCCACTaGATCAGTGACAGAAGTTTGATGTTGTGCTTTAGTGATTCCACT | + |
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Preference number: 6 (lower is better) Translates to: FQNLEFNLLLLGPFH*ISDRSLMLCFSDST Trigger: AGTGGAATCACTAAAGCACAACATCAAACTTCTGTCACTGATCAAGTGGAAGGGACCCAAAAGCAGCAAATTAAATTCTAAGTTTTGGAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000075471.4 ENSMUST00000113063.8 |
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| CDS GCA 72 bp | AAGATAAGTGTCAACTCAACTTCTTTTTCTCCAAGATaGTCTTTGAGGAGCCTTATTTCACCTTCTCTAATG | + |
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Preference number: 6 (lower is better) Translates to: KISVNSTSFSPR*SLRSLISPSLM Trigger: CATTAGAGAAGGTGAAATAAGGCTCCTCAAAGAGCATCTTGGAGAAAAAGAAGTTGAGTTGACACTTATCTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000075471.4 ENSMUST00000113063.8 |
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| CDS CAA 72 bp | CAGTATTGTCACAGTCCAAAGTATCTTGATCCACTTTaGTGTAAGAGAGATACGCATCATATTCCTTGTTGT | + |
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Preference number: 6 (lower is better) Translates to: QYCHSPKYLDPL*CKRDTHHIPCC Trigger: ACAACAAGGAATATGATGCGTATCTCTCTTACACAAAAGTGGATCAAGATACTTTGGACTGTGACAATACTG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075471.4 ENSMUST00000113063.8 |
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| CDS CAA 72 bp | TTAGAATTTAATTTGCTGCTTTTGGGTCCCTTCCACTaGATCAGTGACAGAAGTTTGATGTTGTGCTTTAGT | + |
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Preference number: 6 (lower is better) Translates to: LEFNLLLLGPFH*ISDRSLMLCFS Trigger: ACTAAAGCACAACATCAAACTTCTGTCACTGATCAAGTGGAAGGGACCCAAAAGCAGCAAATTAAATTCTAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000075471.4 ENSMUST00000113063.8 |
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