Pregenerated sensors for IL1RAPL1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000052372Ensembl transcript IDs: ENSMUST00000078875.8, ENSMUST00000113964.2, ENSMUST00000113966.8
Found 174 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CATATGGCCAAGCTGGTCCTAGGAAGAACCCGAGAGAGGATCCGGTaGTCCTTGTCCCATCAGATAGATTTGTCCAAGCACCCCAAGGAA | + |
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Preference number: 1 (lower is better) Translates to: HMAKLVLGRTRERIR*SLSHQIDLSKHPKE Trigger: TTCCTTGGGGTGCTTGGACAAATCTATCTGATGGGACAAGGAGCACCGGATCCTCTCTCGGGTTCTTCCTAGGACCAGCTTGGCCATATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113966.8 |
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| 3UTR TCA 90 bp | TGGTGGTTTGGGTGTATATGCCTAAAATTTCAGCAGTCAAGAGGCTaGGGCAGGAGAATTGAGAGGTTGAAGCCAGCCCAGCCCGAATCC | + |
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Preference number: 1 (lower is better) Translates to: WWFGCICLKFQQSRG*GRRIERLKPAQPES Trigger: GGATTCGGGCTGGGCTGGCTTCAACCTCTCAATTCTCCTGCCTCAGCCTCTTGACTGCTGAAATTTTAGGCATATACACCCAAACCACCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113966.8 |
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| 3UTR CCA 90 bp | TCTCTCTTTCTCTCTCTCTTTTGTTCCCAAATGGCAATGCAAGCCTaGCGTTCAGTCGCACTGCTTTCTGAAGGCCCATATGGCCAAGCT | + |
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Preference number: 1 (lower is better) Translates to: SLFLSLFCSQMAMQA*RSVALLSEGPYGQA Trigger: AGCTTGGCCATATGGGCCTTCAGAAAGCAGTGCGACTGAACGCCAGGCTTGCATTGCCATTTGGGAACAAAAGAGAGAGAGAAAGAGAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113966.8 |
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| 3UTR GCA 90 bp | GATCTTCTTCTCTCTTTCTCTCTCTCTTTTGTTCCCAAATGGCAATaGAAGCCTGGCGTTCAGTCGCACTGCTTTCTGAAGGCCCATATG | + |
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Preference number: 1 (lower is better) Translates to: DLLLSFSLSFVPKWQ*KPGVQSHCFLKAHM Trigger: CATATGGGCCTTCAGAAAGCAGTGCGACTGAACGCCAGGCTTGCATTGCCATTTGGGAACAAAAGAGAGAGAGAAAGAGAGAAGAAGATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113966.8 |
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| 3UTR CCA 90 bp | ATGCATGTTTTTAACAGCAGCAGTCGAGGATTGAGTTCCAGGCACTaGACTGCAGATTCCTTTCAAACTCCCAGGAACGGGATGTCCTTT | + |
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Preference number: 1 (lower is better) Translates to: MHVFNSSSRGLSSRH*TADSFQTPRNGMSF Trigger: AAAGGACATCCCGTTCCTGGGAGTTTGAAAGGAATCTGCAGTCCAGTGCCTGGAACTCAATCCTCGACTGCTGCTGTTAAAAACATGCAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000113966.8 |
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| 3UTR CCA 90 bp | TCAGGCCATTGCCACATTTCCACTCTTGTGAGTATTGGGGGAGTTTaGAATCCAGTCCAATGCCAAGTGTCCATAGTACGAAGGAAACAG | + |
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Preference number: 1 (lower is better) Translates to: SGHCHISTLVSIGGV*NPVQCQVSIVRRKQ Trigger: CTGTTTCCTTCGTACTATGGACACTTGGCATTGGACTGGATTCCAAACTCCCCCAATACTCACAAGAGTGGAAATGTGGCAATGGCCTGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000113966.8 |
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| 3UTR TCA 90 bp | AACAAACAAGAACTAAATCAGGCCATTGCCACATTTCCACTCTTGTaGGTATTGGGGGAGTTTGGAATCCAGTCCAATGCCAAGTGTCCA | + |
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Preference number: 1 (lower is better) Translates to: NKQELNQAIATFPLL*VLGEFGIQSNAKCP Trigger: TGGACACTTGGCATTGGACTGGATTCCAAACTCCCCCAATACTCACAAGAGTGGAAATGTGGCAATGGCCTGATTTAGTTCTTGTTTGTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000113966.8 |
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| 3UTR GCA 90 bp | CGAAGGAAACAGTGGCCTTCTCCGTTTCTGAAAATAACCCAAGTGTaGAAAGCTGACCTGAAATGTTTAGCTGTCCTTGAAGCTTCAGTT | + |
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Preference number: 1 (lower is better) Translates to: RRKQWPSPFLKITQV*KADLKCLAVLEASV Trigger: AACTGAAGCTTCAAGGACAGCTAAACATTTCAGGTCAGCTTTGCACACTTGGGTTATTTTCAGAAACGGAGAAGGCCACTGTTTCCTTCG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113966.8 |
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| 3UTR CCA 90 bp | ACTTCTGTTATACACAGAACACGTGAACCCATGAGTTCCCTTCTCTaGTTCTCATGTGGAGCTGATAGAGGAATAGAAACTTGGGAGGAA | + |
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Preference number: 1 (lower is better) Translates to: TSVIHRTREPMSSLL*FSCGADRGIETWEE Trigger: TTCCTCCCAAGTTTCTATTCCTCTATCAGCTCCACATGAGAACCAGAGAAGGGAACTCATGGGTTCACGTGTTCTGTGTATAACAGAAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113966.8 |
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| 3UTR TCA 90 bp | GTACTTGTCTCTCCTATGCTTATGGTTCTAGCTTGTCCTCTCCAGTaGACTCTAGTGCAGTTCCTACTTTTATGTCTATGGCCTACTTAC | + |
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Preference number: 1 (lower is better) Translates to: VLVSPMLMVLACPLQ*TLVQFLLLCLWPTY Trigger: GTAAGTAGGCCATAGACATAAAAGTAGGAACTGCACTAGAGTTCACTGGAGAGGACAAGCTAGAACCATAAGCATAGGAGAGACAAGTAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113966.8 |
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| 3UTR TCA 90 bp | AATCAATGCACGTCCCAAGGCTCCTTTGCCTTGTCACACAGACACTaGGACCTTTGCATTGTTACAAATGTTTGTACTTGTCTCTCCTAT | + |
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Preference number: 1 (lower is better) Translates to: NQCTSQGSFALSHRH*DLCIVTNVCTCLSY Trigger: ATAGGAGAGACAAGTACAAACATTTGTAACAATGCAAAGGTCTCAGTGTCTGTGTGACAAGGCAAAGGAGCCTTGGGACGTGCATTGATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113966.8 |
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| 3UTR TCA 90 bp | CAAATGGACTTTGAATCCATAATGTACCATTCAGAGCTCAGGCGGTaGTTGATGAAAAACAGGCAATACCAAATATCACACGTGTCCAAG | + |
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Preference number: 1 (lower is better) Translates to: QMDFESIMYHSELRR*LMKNRQYQISHVSK Trigger: CTTGGACACGTGTGATATTTGGTATTGCCTGTTTTTCATCAATCACCGCCTGAGCTCTGAATGGTACATTATGGATTCAAAGTCCATTTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000113966.8 |
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| 3UTR CCA 90 bp | ATTGATGAAAAACAGGCAATACCAAATATCACACGTGTCCAAGTCTaGAAGTCCATTCTTTCCCCCAGCTTGGCTAACACATTCACATTT | + |
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Preference number: 1 (lower is better) Translates to: IDEKQAIPNITRVQV*KSILSPSLANTFTF Trigger: AAATGTGAATGTGTTAGCCAAGCTGGGGGAAAGAATGGACTTCCAGACTTGGACACGTGTGATATTTGGTATTGCCTGTTTTTCATCAAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000113966.8 |
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| 3UTR TCA 90 bp | GAGAAGTACTATGTAAAATGCACTTGTACTGACTGTGAACAGATCTaGGAGTGTCTGAGTTTAAAATACAACTTGAACGCCAGCAGAGGA | + |
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Preference number: 1 (lower is better) Translates to: EKYYVKCTCTDCEQI*ECLSLKYNLNASRG Trigger: TCCTCTGCTGGCGTTCAAGTTGTATTTTAAACTCAGACACTCTCAGATCTGTTCACAGTCAGTACAAGTGCATTTTACATAGTACTTCTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113966.8 |
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| 3UTR TCA 90 bp | GCGGGAAAGATCCACAATAAGGCAAGAAATAACCTCTGCTTCCATTaGCAAAATCTTCTTCGCTTATTACAGAGTCACATTGTGATTTGT | + |
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Preference number: 1 (lower is better) Translates to: AGKIHNKARNNLCFH*QNLLRLLQSHIVIC Trigger: ACAAATCACAATGTGACTCTGTAATAAGCGAAGAAGATTTTGTCAATGGAAGCAGAGGTTATTTCTTGCCTTATTGTGGATCTTTCCCGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113966.8 |
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| 3UTR GCA 90 bp | GGTGGAAAGAGTACACTAAGGATTGTTGTTAACAGGAGCATATACTaGAAGCAGTATGGAAAACTGCCCATTATGCTAACATTAAGATTC | + |
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Preference number: 1 (lower is better) Translates to: GGKSTLRIVVNRSIY*KQYGKLPIMLTLRF Trigger: GAATCTTAATGTTAGCATAATGGGCAGTTTTCCATACTGCTTGCAGTATATGCTCCTGTTAACAACAATCCTTAGTGTACTCTTTCCACC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113966.8 |
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| 3UTR CCA 90 bp | GGACTAATGTATACACCTAAACTAATAAAGAAGAAATTGGTGGTTTaGGTGTATATGCCTAAAATTTCAGCAGTCAAGAGGCTGAGGCAG | + |
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Preference number: 1 (lower is better) Translates to: GLMYTPKLIKKKLVV*VYMPKISAVKRLRQ Trigger: CTGCCTCAGCCTCTTGACTGCTGAAATTTTAGGCATATACACCCAAACCACCAATTTCTTCTTTATTAGTTTAGGTGTATACATTAGTCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113966.8 |
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| 3UTR TCA 90 bp | CATTGTCCTTTTAAGAATTCTGTCTTCTGCAGGATCTTTCGTGATTaGTTTAGCATCATAGTTAACATGAGAGGGAATTCGCTGCTTATG | + |
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Preference number: 1 (lower is better) Translates to: HCPFKNSVFCRIFRD*FSIIVNMRGNSLLM Trigger: CATAAGCAGCGAATTCCCTCTCATGTTAACTATGATGCTAAATCAATCACGAAAGATCCTGCAGAAGACAGAATTCTTAAAAGGACAATG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113966.8 |
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| 3UTR GCA 90 bp | TCTAAGCTTAGATCAGCTGGTAACACAACATACAAAGGTCTTCTCTaGCTGTTGAAGACCAAAGGGATGGGATACAAATTAAATAATCAA | + |
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Preference number: 1 (lower is better) Translates to: SKLRSAGNTTYKGLL*LLKTKGMGYKLNNQ Trigger: TTGATTATTTAATTTGTATCCCATCCCTTTGGTCTTCAACAGGCAGAGAAGACCTTTGTATGTTGTGTTACCAGCTGATCTAAGCTTAGA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113966.8 |
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| 3UTR CAA 90 bp | GCCAAGCTGGTCCTAGGAAGAACCCGAGAGAGGATCCGGTGCTCCTaGTCCCATCAGATAGATTTGTCCAAGCACCCCAAGGAAATGTTA | + |
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Preference number: 2 (lower is better) Translates to: AKLVLGRTRERIRCS*SHQIDLSKHPKEML Trigger: TAACATTTCCTTGGGGTGCTTGGACAAATCTATCTGATGGGACAAGGAGCACCGGATCCTCTCTCGGGTTCTTCCTAGGACCAGCTTGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113966.8 |
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| 3UTR CAA 90 bp | GGGCCCTCCTATGAACAGATCTTCTTCTCTCTTTCTCTCTCTCTTTaGTTCCCAAATGGCAATGCAAGCCTGGCGTTCAGTCGCACTGCT | + |
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Preference number: 2 (lower is better) Translates to: GPSYEQIFFSLSLSL*FPNGNASLAFSRTA Trigger: AGCAGTGCGACTGAACGCCAGGCTTGCATTGCCATTTGGGAACAAAAGAGAGAGAGAAAGAGAGAAGAAGATCTGTTCATAGGAGGGCCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113966.8 |
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| 3UTR-3UTR CCA 90 bp | TTCTCTCTCTCTTTTGTTCCCAAATGGCAATGCAAGCCTGGCGTTCAGTCGCACTTGAGTTCCAGGCACTaGACTGCAGATTCCTTTCAA | + |
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Preference number: 2 (lower is better) Translates to: FSLSFVPKWQCKPGVQSHLSSRH*TADSFQ Trigger: TTGAAAGGAATCTGCAGTCCAGTGCCTGGAACTCAA...GTGCGACTGAACGCCAGGCTTGCATTGCCATTTGGGAACAAAAGAGAGAGAGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113966.8 |
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| 3UTR CAA 90 bp | ATCAGGCCATTGCCACATTTCCACTCTTGTGAGTATTGGGGGAGTTaGGAATCCAGTCCAATGCCAAGTGTCCATAGTACGAAGGAAACA | + |
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Preference number: 2 (lower is better) Translates to: IRPLPHFHSCEYWGS*ESSPMPSVHSTKET Trigger: TGTTTCCTTCGTACTATGGACACTTGGCATTGGACTGGATTCCAAACTCCCCCAATACTCACAAGAGTGGAAATGTGGCAATGGCCTGAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000113966.8 |
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| 3UTR-3UTR GCA 90 bp | ACAACATACAAAGGTCTTCTCTGCCTGTTGAAGACCAAAGGGATGGGATACAAACGAGAGAGGATCCGGTaGTCCTTGTCCCATCAGATA | + |
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Preference number: 2 (lower is better) Translates to: TTYKGLLCLLKTKGMGYKRERIR*SLSHQI Trigger: TATCTGATGGGACAAGGAGCACCGGATCCTCTCTCG...TTTGTATCCCATCCCTTTGGTCTTCAACAGGCAGAGAAGACCTTTGTATGTTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113966.8 |
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| 3UTR-3UTR TCA 90 bp | CTTCTGACAGTCTTTACCATAGAGCATAGGTTTTCACTCTGCAATGAACAAAATGCAGCAGTCGAGGATTaGGTTCCAGGCACTGGACTG | + |
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Preference number: 2 (lower is better) Translates to: LLTVFTIEHRFSLCNEQNAAVED*VPGTGL Trigger: CAGTCCAGTGCCTGGAACTCAATCCTCGACTGCTGC...ATTTTGTTCATTGCAGAGTGAAAACCTATGCTCTATGGTAAAGACTGTCAGAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113966.8 |
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| 3UTR-3UTR GCA 90 bp | CTTCTGACAGTCTTTACCATAGAGCATAGGTTTTCACTCTGCAATGAACAAAATGTCCCAAGGCTCCTTTaGCTTGTCACACAGACACTG | + |
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Preference number: 2 (lower is better) Translates to: LLTVFTIEHRFSLCNEQNVPRLL*LVTQTL Trigger: CAGTGTCTGTGTGACAAGGCAAAGGAGCCTTGGGAC...ATTTTGTTCATTGCAGAGTGAAAACCTATGCTCTATGGTAAAGACTGTCAGAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113966.8 |
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| 3UTR-3UTR CCA 90 bp | AAACAGGCAATACCAAATATCACACGTGTCCAAGTCTGGAAGTCCATTCTTTCCAGTATTGGGGGAGTTTaGAATCCAGTCCAATGCCAA | + |
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Preference number: 2 (lower is better) Translates to: KQAIPNITRVQVWKSILSSIGGV*NPVQCQ Trigger: TTGGCATTGGACTGGATTCCAAACTCCCCCAATACT...GGAAAGAATGGACTTCCAGACTTGGACACGTGTGATATTTGGTATTGCCTGTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000113966.8 |
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| 3UTR-3UTR CCA 90 bp | ACAACATACAAAGGTCTTCTCTGCCTGTTGAAGACCAAAGGGATGGGATACAAACACTCTTGTGAGTATTaGGGGAGTTTGGAATCCAGT | + |
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Preference number: 2 (lower is better) Translates to: TTYKGLLCLLKTKGMGYKHSCEY*GSLESS Trigger: ACTGGATTCCAAACTCCCCCAATACTCACAAGAGTG...TTTGTATCCCATCCCTTTGGTCTTCAACAGGCAGAGAAGACCTTTGTATGTTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113966.8 |
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| 3UTR-3UTR CCA 90 bp | ACAACATACAAAGGTCTTCTCTGCCTGTTGAAGACCAAAGGGATGGGATACAAAATGAGTTCCCTTCTCTaGTTCTCATGTGGAGCTGAT | + |
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Preference number: 2 (lower is better) Translates to: TTYKGLLCLLKTKGMGYKMSSLL*FSCGAD Trigger: ATCAGCTCCACATGAGAACCAGAGAAGGGAACTCAT...TTTGTATCCCATCCCTTTGGTCTTCAACAGGCAGAGAAGACCTTTGTATGTTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113966.8 |
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| 3UTR-3UTR CCA 90 bp | AAACAGGCAATACCAAATATCACACGTGTCCAAGTCTGGAAGTCCATTCTTTCCTCCTGTTCTTCCCTTTaGTTTGGAAGCTTTCAGTGT | + |
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Preference number: 2 (lower is better) Translates to: KQAIPNITRVQVWKSILSSCSSL*FGSFQC Trigger: ACACTGAAAGCTTCCAAACCAAAGGGAAGAACAGGA...GGAAAGAATGGACTTCCAGACTTGGACACGTGTGATATTTGGTATTGCCTGTTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113966.8 |
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| 3UTR-3UTR CCA 90 bp | ACAACATACAAAGGTCTTCTCTGCCTGTTGAAGACCAAAGGGATGGGATACAAATCTCCTTATAGGGAGTaGCAGGAATTAAGCAAACAC | + |
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Preference number: 2 (lower is better) Translates to: TTYKGLLCLLKTKGMGYKSPYRE*QELSKH Trigger: GTGTTTGCTTAATTCCTGCCACTCCCTATAAGGAGA...TTTGTATCCCATCCCTTTGGTCTTCAACAGGCAGAGAAGACCTTTGTATGTTGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113966.8 |
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| 3UTR-3UTR TCA 90 bp | CTTCTGACAGTCTTTACCATAGAGCATAGGTTTTCACTCTGCAATGAACAAAATCCCACAGGTGATGACTaGGTAGGAATTTCCCATGAT | + |
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Preference number: 2 (lower is better) Translates to: LLTVFTIEHRFSLCNEQNPTGDD*VGISHD Trigger: ATCATGGGAAATTCCTACTCAGTCATCACCTGTGGG...ATTTTGTTCATTGCAGAGTGAAAACCTATGCTCTATGGTAAAGACTGTCAGAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113966.8 |
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| 3UTR-3UTR TCA 90 bp | CTTCTGACAGTCTTTACCATAGAGCATAGGTTTTCACTCTGCAATGAACAAAATTCAGAGCTCAGGCGGTaGTTGATGAAAAACAGGCAA | + |
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Preference number: 2 (lower is better) Translates to: LLTVFTIEHRFSLCNEQNSELRR*LMKNRQ Trigger: TTGCCTGTTTTTCATCAATCACCGCCTGAGCTCTGA...ATTTTGTTCATTGCAGAGTGAAAACCTATGCTCTATGGTAAAGACTGTCAGAAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000113966.8 |
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| 3UTR-3UTR GCA 90 bp | CTTCTGACAGTCTTTACCATAGAGCATAGGTTTTCACTCTGCAATGAACAAAATTTCCAGGCACTGGACTaGAGATTCCTTTCAAACTCC | + |
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Preference number: 2 (lower is better) Translates to: LLTVFTIEHRFSLCNEQNFQALD*RFLSNS Trigger: GGAGTTTGAAAGGAATCTGCAGTCCAGTGCCTGGAA...ATTTTGTTCATTGCAGAGTGAAAACCTATGCTCTATGGTAAAGACTGTCAGAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113966.8 |
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| 3UTR CAA 90 bp | TTCTCTGAATCTAAACGTCTATGGCTTTCTTGGATGCTGGATGTCTaGAGAGTCACACCCAGGAAAACAGATTTACGTGTTTCGTTATTT | + |
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Preference number: 2 (lower is better) Translates to: FSESKRLWLSWMLDV*RVTPRKTDLRVSLF Trigger: AAATAACGAAACACGTAAATCTGTTTTCCTGGGTGTGACTCTCAAGACATCCAGCATCCAAGAAAGCCATAGACGTTTAGATTCAGAGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113966.8 |
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| 3UTR-3UTR CCA 90 bp | CTTCTGACAGTCTTTACCATAGAGCATAGGTTTTCACTCTGCAATGAACAAAATTCTTTTGTTCCCAAATaGCAATGCAAGCCTGGCGTT | + |
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Preference number: 2 (lower is better) Translates to: LLTVFTIEHRFSLCNEQNSFVPK*QCKPGV Trigger: AACGCCAGGCTTGCATTGCCATTTGGGAACAAAAGA...ATTTTGTTCATTGCAGAGTGAAAACCTATGCTCTATGGTAAAGACTGTCAGAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000113966.8 |
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| 3UTR-3UTR CCA 90 bp | AAACAGGCAATACCAAATATCACACGTGTCCAAGTCTGGAAGTCCATTCTTTCCCTACTTTTATGTCTATaGCCTACTTACATCTTAGCC | + |
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Preference number: 2 (lower is better) Translates to: KQAIPNITRVQVWKSILSLLLCL*PTYILA Trigger: GGCTAAGATGTAAGTAGGCCATAGACATAAAAGTAG...GGAAAGAATGGACTTCCAGACTTGGACACGTGTGATATTTGGTATTGCCTGTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113966.8 |
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| 3UTR-3UTR TCA 90 bp | CTTCTGACAGTCTTTACCATAGAGCATAGGTTTTCACTCTGCAATGAACAAAATTGTAGTGGTCACTGTTaGATGACTAGCACAACTTTG | + |
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Preference number: 2 (lower is better) Translates to: LLTVFTIEHRFSLCNEQNCSGHC*MTSTTL Trigger: CAAAGTTGTGCTAGTCATTCAACAGTGACCACTACA...ATTTTGTTCATTGCAGAGTGAAAACCTATGCTCTATGGTAAAGACTGTCAGAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113966.8 |
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| 3UTR-3UTR TCA 90 bp | CTTCTGACAGTCTTTACCATAGAGCATAGGTTTTCACTCTGCAATGAACAAAATAAGCTAGATAGTAAGTaGCAAATTTCCTGGGAGCAT | + |
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Preference number: 2 (lower is better) Translates to: LLTVFTIEHRFSLCNEQNKLDSK*QISWEH Trigger: ATGCTCCCAGGAAATTTGTCACTTACTATCTAGCTT...ATTTTGTTCATTGCAGAGTGAAAACCTATGCTCTATGGTAAAGACTGTCAGAAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113966.8 |
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| 3UTR CAA 90 bp | CTTAGATCAGCTGGTAACACAACATACAAAGGTCTTCTCTGCCTGTaGAAGACCAAAGGGATGGGATACAAATTAAATAATCAAAGATTT | + |
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Preference number: 2 (lower is better) Translates to: LRSAGNTTYKGLLCL*KTKGMGYKLNNQRF Trigger: AAATCTTTGATTATTTAATTTGTATCCCATCCCTTTGGTCTTCAACAGGCAGAGAAGACCTTTGTATGTTGTGTTACCAGCTGATCTAAG 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113966.8 |
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| 3UTR GCA 72 bp | CAGCAGCAGTCGAGGATTGAGTTCCAGGCACTGGACTaGAGATTCCTTTCAAACTCCCAGGAACGGGATGTC | + |
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Preference number: 3 (lower is better) Translates to: QQQSRIEFQALD*RFLSNSQERDV Trigger: GACATCCCGTTCCTGGGAGTTTGAAAGGAATCTGCAGTCCAGTGCCTGGAACTCAATCCTCGACTGCTGCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113966.8 |
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| 3UTR GCA 72 bp | AAGCTGGTCCTAGGAAGAACCCGAGAGAGGATCCGGTaGTCCTTGTCCCATCAGATAGATTTGTCCAAGCAC | + |
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Preference number: 3 (lower is better) Translates to: KLVLGRTRERIR*SLSHQIDLSKH Trigger: GTGCTTGGACAAATCTATCTGATGGGACAAGGAGCACCGGATCCTCTCTCGGGTTCTTCCTAGGACCAGCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113966.8 |
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| 3UTR-3UTR CAA 90 bp | TTCTCTCTCTCTTTTGTTCCCAAATGGCAATGCAAGCCTGGCGTTCAGTCGCACAGCAGCAGTCGAGGATaGAGTTCCAGGCACTGGACT | + |
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Preference number: 3 (lower is better) Translates to: FSLSFVPKWQCKPGVQSHSSSRG*SSRHWT Trigger: AGTCCAGTGCCTGGAACTCAATCCTCGACTGCTGCT...GTGCGACTGAACGCCAGGCTTGCATTGCCATTTGGGAACAAAAGAGAGAGAGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113966.8 |
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| 3UTR CCA 72 bp | TTTAACAGCAGCAGTCGAGGATTGAGTTCCAGGCACTaGACTGCAGATTCCTTTCAAACTCCCAGGAACGGG | + |
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Preference number: 3 (lower is better) Translates to: FNSSSRGLSSRH*TADSFQTPRNG Trigger: CCCGTTCCTGGGAGTTTGAAAGGAATCTGCAGTCCAGTGCCTGGAACTCAATCCTCGACTGCTGCTGTTAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113966.8 |
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| 3UTR TCA 72 bp | GGGTGTATATGCCTAAAATTTCAGCAGTCAAGAGGCTaGGGCAGGAGAATTGAGAGGTTGAAGCCAGCCCAG | + |
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Preference number: 3 (lower is better) Translates to: GCICLKFQQSRG*GRRIERLKPAQ Trigger: CTGGGCTGGCTTCAACCTCTCAATTCTCCTGCCTCAGCCTCTTGACTGCTGAAATTTTAGGCATATACACCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113966.8 |
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| 3UTR CCA 72 bp | CTCTCTCTCTTTTGTTCCCAAATGGCAATGCAAGCCTaGCGTTCAGTCGCACTGCTTTCTGAAGGCCCATAT | + |
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Preference number: 3 (lower is better) Translates to: LSLFCSQMAMQA*RSVALLSEGPY Trigger: ATATGGGCCTTCAGAAAGCAGTGCGACTGAACGCCAGGCTTGCATTGCCATTTGGGAACAAAAGAGAGAGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113966.8 |
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| 3UTR GCA 72 bp | CTCTCTTTCTCTCTCTCTTTTGTTCCCAAATGGCAATaGAAGCCTGGCGTTCAGTCGCACTGCTTTCTGAAG | + |
|
Preference number: 3 (lower is better) Translates to: LSFSLSFVPKWQ*KPGVQSHCFLK Trigger: CTTCAGAAAGCAGTGCGACTGAACGCCAGGCTTGCATTGCCATTTGGGAACAAAAGAGAGAGAGAAAGAGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113966.8 |
||
| 3UTR CCA 72 bp | ATCAGGCCATTGCCACATTTCCACTCTTGTGAGTATTaGGGGAGTTTGGAATCCAGTCCAATGCCAAGTGTC | + |
|
Preference number: 3 (lower is better) Translates to: IRPLPHFHSCEY*GSLESSPMPSV Trigger: GACACTTGGCATTGGACTGGATTCCAAACTCCCCCAATACTCACAAGAGTGGAAATGTGGCAATGGCCTGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113966.8 |
||
| 3UTR-3UTR CAA 90 bp | AAACAGGCAATACCAAATATCACACGTGTCCAAGTCTGGAAGTCCATTCTTTCCCGTCCCAAGGCTCCTTaGCCTTGTCACACAGACACT | + |
|
Preference number: 3 (lower is better) Translates to: KQAIPNITRVQVWKSILSRPKAP*PCHTDT Trigger: AGTGTCTGTGTGACAAGGCAAAGGAGCCTTGGGACG...GGAAAGAATGGACTTCCAGACTTGGACACGTGTGATATTTGGTATTGCCTGTTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113966.8 |
||
| 3UTR TCA 72 bp | GAACTAAATCAGGCCATTGCCACATTTCCACTCTTGTaGGTATTGGGGGAGTTTGGAATCCAGTCCAATGCC | + |
|
Preference number: 3 (lower is better) Translates to: ELNQAIATFPLL*VLGEFGIQSNA Trigger: GGCATTGGACTGGATTCCAAACTCCCCCAATACTCACAAGAGTGGAAATGTGGCAATGGCCTGATTTAGTTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000113966.8 |
||
| 3UTR CCA 72 bp | CTTCTTCTCTCTTTCTCTCTCTCTTTTGTTCCCAAATaGCAATGCAAGCCTGGCGTTCAGTCGCACTGCTTT | + |
|
Preference number: 3 (lower is better) Translates to: LLLSFSLSFVPK*QCKPGVQSHCF Trigger: AAAGCAGTGCGACTGAACGCCAGGCTTGCATTGCCATTTGGGAACAAAAGAGAGAGAGAAAGAGAGAAGAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113966.8 |
||
| 3UTR CCA 72 bp | TGCCACATTTCCACTCTTGTGAGTATTGGGGGAGTTTaGAATCCAGTCCAATGCCAAGTGTCCATAGTACGA | + |
|
Preference number: 3 (lower is better) Translates to: CHISTLVSIGGV*NPVQCQVSIVR Trigger: TCGTACTATGGACACTTGGCATTGGACTGGATTCCAAACTCCCCCAATACTCACAAGAGTGGAAATGTGGCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000113966.8 |
||
| 3UTR-3UTR CAA 90 bp | AAACAGGCAATACCAAATATCACACGTGTCCAAGTCTGGAAGTCCATTCTTTCCAGGATCCGGTGCTCCTaGTCCCATCAGATAGATTTG | + |
|
Preference number: 3 (lower is better) Translates to: KQAIPNITRVQVWKSILSRIRCS*SHQIDL Trigger: CAAATCTATCTGATGGGACAAGGAGCACCGGATCCT...GGAAAGAATGGACTTCCAGACTTGGACACGTGTGATATTTGGTATTGCCTGTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113966.8 |
||
| 3UTR TCA 72 bp | GAGTTCTCACAGAACTTCTGTTATACACAGAACACGTaGACCCATGAGTTCCCTTCTCTGGTTCTCATGTGG | + |
|
Preference number: 3 (lower is better) Translates to: EFSQNFCYTQNT*THEFPSLVLMW Trigger: CCACATGAGAACCAGAGAAGGGAACTCATGGGTTCACGTGTTCTGTGTATAACAGAAGTTCTGTGAGAACTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113966.8 |
||
| 3UTR-3UTR CAA 90 bp | AAACAGGCAATACCAAATATCACACGTGTCCAAGTCTGGAAGTCCATTCTTTCCTCCCATCAGATAGATTaGTCCAAGCACCCCAAGGAA | + |
|
Preference number: 3 (lower is better) Translates to: KQAIPNITRVQVWKSILSSHQID*SKHPKE Trigger: TTCCTTGGGGTGCTTGGACAAATCTATCTGATGGGA...GGAAAGAATGGACTTCCAGACTTGGACACGTGTGATATTTGGTATTGCCTGTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113966.8 |
||
| 3UTR TCA 72 bp | ACGTCCCAAGGCTCCTTTGCCTTGTCACACAGACACTaGGACCTTTGCATTGTTACAAATGTTTGTACTTGT | + |
|
Preference number: 3 (lower is better) Translates to: TSQGSFALSHRH*DLCIVTNVCTC Trigger: ACAAGTACAAACATTTGTAACAATGCAAAGGTCTCAGTGTCTGTGTGACAAGGCAAAGGAGCCTTGGGACGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113966.8 |
||
| 3UTR CCA 72 bp | ATACACAGAACACGTGAACCCATGAGTTCCCTTCTCTaGTTCTCATGTGGAGCTGATAGAGGAATAGAAACT | + |
|
Preference number: 3 (lower is better) Translates to: IHRTREPMSSLL*FSCGADRGIET Trigger: AGTTTCTATTCCTCTATCAGCTCCACATGAGAACCAGAGAAGGGAACTCATGGGTTCACGTGTTCTGTGTAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113966.8 |
||
| 3UTR CCA 72 bp | AGACTGTTCTCTGAATCTAAACGTCTATGGCTTTCTTaGATGCTGGATGTCTTGAGAGTCACACCCAGGAAA | + |
|
Preference number: 3 (lower is better) Translates to: RLFSESKRLWLS*MLDVLRVTPRK Trigger: TTTCCTGGGTGTGACTCTCAAGACATCCAGCATCCAAGAAAGCCATAGACGTTTAGATTCAGAGAACAGTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113966.8 |
||
| 3UTR-3UTR CAA 90 bp | AAACAGGCAATACCAAATATCACACGTGTCCAAGTCTGGAAGTCCATTCTTTCCGAAGACCCAGGCAAGTaGTCAGGGAAGTCAATATTT | + |
|
Preference number: 3 (lower is better) Translates to: KQAIPNITRVQVWKSILSEDPGK*SGKSIF Trigger: AAATATTGACTTCCCTGACAACTTGCCTGGGTCTTC...GGAAAGAATGGACTTCCAGACTTGGACACGTGTGATATTTGGTATTGCCTGTTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113966.8 |
||
| 3UTR-3UTR CAA 90 bp | CTTCTGACAGTCTTTACCATAGAGCATAGGTTTTCACTCTGCAATGAACAAAATGGTCTTCTCTGCCTGTaGAAGACCAAAGGGATGGGA | + |
|
Preference number: 3 (lower is better) Translates to: LLTVFTIEHRFSLCNEQNGLLCL*KTKGMG Trigger: TCCCATCCCTTTGGTCTTCAACAGGCAGAGAAGACC...ATTTTGTTCATTGCAGAGTGAAAACCTATGCTCTATGGTAAAGACTGTCAGAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113966.8 |
||
| 3UTR TCA 72 bp | TCTCCTATGCTTATGGTTCTAGCTTGTCCTCTCCAGTaGACTCTAGTGCAGTTCCTACTTTTATGTCTATGG | + |
|
Preference number: 3 (lower is better) Translates to: SPMLMVLACPLQ*TLVQFLLLCLW Trigger: CCATAGACATAAAAGTAGGAACTGCACTAGAGTTCACTGGAGAGGACAAGCTAGAACCATAAGCATAGGAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113966.8 |
||
| 3UTR-3UTR CAA 90 bp | AAACAGGCAATACCAAATATCACACGTGTCCAAGTCTGGAAGTCCATTCTTTCCATGACTAGCACAACTTaGGGTCTAGAGTGTATTCTG | + |
|
Preference number: 3 (lower is better) Translates to: KQAIPNITRVQVWKSILSMTSTT*GLECIL Trigger: CAGAATACACTCTAGACCCAAAGTTGTGCTAGTCAT...GGAAAGAATGGACTTCCAGACTTGGACACGTGTGATATTTGGTATTGCCTGTTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113966.8 |
||
| 3UTR-3UTR CAA 90 bp | ACAACATACAAAGGTCTTCTCTGCCTGTTGAAGACCAAAGGGATGGGATACAAACAGACACTGAGACCTTaGCATTGTTACAAATGTTTG | + |
|
Preference number: 3 (lower is better) Translates to: TTYKGLLCLLKTKGMGYKQTLRP*HCYKCL Trigger: CAAACATTTGTAACAATGCAAAGGTCTCAGTGTCTG...TTTGTATCCCATCCCTTTGGTCTTCAACAGGCAGAGAAGACCTTTGTATGTTGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113966.8 |
||
| 3UTR-3UTR CAA 90 bp | ACAACATACAAAGGTCTTCTCTGCCTGTTGAAGACCAAAGGGATGGGATACAAATACAAATGTTTGTACTaGTCTCTCCTATGCTTATGG | + |
|
Preference number: 3 (lower is better) Translates to: TTYKGLLCLLKTKGMGYKYKCLY*SLLCLW Trigger: CCATAAGCATAGGAGAGACAAGTACAAACATTTGTA...TTTGTATCCCATCCCTTTGGTCTTCAACAGGCAGAGAAGACCTTTGTATGTTGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113966.8 |
||
| 3UTR TCA 72 bp | GTTTGTTTGTTTAAATACTGCCTCTGCTGGCAACTTTaGTTAGAGCTGAAAAGCAGGGTCCATTTCAAAAGG | + |
|
Preference number: 3 (lower is better) Translates to: VCLFKYCLCWQL*LELKSRVHFKR Trigger: CCTTTTGAAATGGACCCTGCTTTTCAGCTCTAATCAAAGTTGCCAGCAGAGGCAGTATTTAAACAAACAAAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113964.2 |
||
| 3UTR TCA 72 bp | TTTGAATCCATAATGTACCATTCAGAGCTCAGGCGGTaGTTGATGAAAAACAGGCAATACCAAATATCACAC | + |
|
Preference number: 3 (lower is better) Translates to: FESIMYHSELRR*LMKNRQYQISH Trigger: GTGTGATATTTGGTATTGCCTGTTTTTCATCAATCACCGCCTGAGCTCTGAATGGTACATTATGGATTCAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000113966.8 |
||
| 3UTR-3UTR CAA 90 bp | CTTCTGACAGTCTTTACCATAGAGCATAGGTTTTCACTCTGCAATGAACAAAATCATTGTTACAAATGTTaGTACTTGTCTCTCCTATGC | + |
|
Preference number: 3 (lower is better) Translates to: LLTVFTIEHRFSLCNEQNHCYKC*YLSLLC Trigger: GCATAGGAGAGACAAGTACAAACATTTGTAACAATG...ATTTTGTTCATTGCAGAGTGAAAACCTATGCTCTATGGTAAAGACTGTCAGAAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113966.8 |
||
| 3UTR TCA 72 bp | TTTAAGAATTCTGTCTTCTGCAGGATCTTTCGTGATTaGTTTAGCATCATAGTTAACATGAGAGGGAATTCG | + |
|
Preference number: 3 (lower is better) Translates to: FKNSVFCRIFRD*FSIIVNMRGNS Trigger: CGAATTCCCTCTCATGTTAACTATGATGCTAAATCAATCACGAAAGATCCTGCAGAAGACAGAATTCTTAAA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113966.8 |
||
| 3UTR TCA 72 bp | TGCCTCTATTTTTCATCAACTACAGCAGTGATGGAATaGATGGTCAAACAAATTCAGATCAGAGACAAAAAG | + |
|
Preference number: 3 (lower is better) Translates to: CLYFSSTTAVME*MVKQIQIRDKK Trigger: CTTTTTGTCTCTGATCTGAATTTGTTTGACCATTCATTCCATCACTGCTGTAGTTGATGAAAAATAGAGGCA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000113966.8 |
||
| 3UTR CCA 72 bp | CCAGCAGAGGAAAATGATTACATACACTTTCCTATTTaGGTTCCCTCAATTTCTGAAGTTGTAAAAGTTGTA | + |
|
Preference number: 3 (lower is better) Translates to: PAEENDYIHFPI*VPSISEVVKVV Trigger: TACAACTTTTACAACTTCAGAAATTGAGGGAACCCAAATAGGAAAGTGTATGTAATCATTTTCCTCTGCTGG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113966.8 |
||
| 3UTR GCA 72 bp | CTCTCATTGACTAGTAAAGATAGATCCGTAATACTTTaGCACGTATTCATGCACTATGTAATAAGGTCATTT | + |
|
Preference number: 3 (lower is better) Translates to: LSLTSKDRSVIL*HVFMHYVIRSF Trigger: AAATGACCTTATTACATAGTGCATGAATACGTGGCAAAGTATTACGGATCTATCTTTACTAGTCAATGAGAG 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113966.8 |
||
| 3UTR CCA 72 bp | TATACACCTAAACTAATAAAGAAGAAATTGGTGGTTTaGGTGTATATGCCTAAAATTTCAGCAGTCAAGAGG | + |
|
Preference number: 3 (lower is better) Translates to: YTPKLIKKKLVV*VYMPKISAVKR Trigger: CCTCTTGACTGCTGAAATTTTAGGCATATACACCCAAACCACCAATTTCTTCTTTATTAGTTTAGGTGTATA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113966.8 |
||
| CDS-3UTR GCA 90 bp | CTCTTTTGTTCCCAAATGGCAATGCAAGCCTGGCGTTCAGTCGCACTGCTTTCTATGGCCGAGACAGTCTaGAGCTCCCCAAAAGGCCCC | + |
|
Preference number: 4 (lower is better) Translates to: LFCSQMAMQAWRSVALLSMAETV*SSPKGP Trigger: GGGGCCTTTTGGGGAGCTGCAGACTGTCTCGGCCAT...AGAAAGCAGTGCGACTGAACGCCAGGCTTGCATTGCCATTTGGGAACAAAAGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000113966.8 |
||
| 3UTR CAA 72 bp | GTCCTAGGAAGAACCCGAGAGAGGATCCGGTGCTCCTaGTCCCATCAGATAGATTTGTCCAAGCACCCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: VLGRTRERIRCS*SHQIDLSKHPK Trigger: CTTGGGGTGCTTGGACAAATCTATCTGATGGGACAAGGAGCACCGGATCCTCTCTCGGGTTCTTCCTAGGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113966.8 |
||
| CDS-3UTR TCA 90 bp | CTCTTTTGTTCCCAAATGGCAATGCAAGCCTGGCGTTCAGTCGCACTGCTTTCTGGTGGCTGCAGCCATTaGAATGGCCGAGACAGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: LFCSQMAMQAWRSVALLSGGCSH*NGRDSL Trigger: CAGACTGTCTCGGCCATTTCAATGGCTGCAGCCACC...AGAAAGCAGTGCGACTGAACGCCAGGCTTGCATTGCCATTTGGGAACAAAAGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113966.8 |
||
| CDS-3UTR CCA 90 bp | TTCTCTCTCTCTTTTGTTCCCAAATGGCAATGCAAGCCTGGCGTTCAGTCGCACTCCTATGGAGGTAAGTaGCAGGGTGCCCGTAGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: FSLSFVPKWQCKPGVQSHSYGGK*QGARRR Trigger: CCTCCTACGGGCACCCTGCCACTTACCTCCATAGGA...GTGCGACTGAACGCCAGGCTTGCATTGCCATTTGGGAACAAAAGAGAGAGAGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113966.8 |
||
| CDS-3UTR CCA 90 bp | CTCTTTTGTTCCCAAATGGCAATGCAAGCCTGGCGTTCAGTCGCACTGCTTTCTGAACGGAGATCTGGATaGGCAGTGGCTAGAGCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: LFCSQMAMQAWRSVALLSERRSG*AVARAV Trigger: CACAGCTCTAGCCACTGCCCATCCAGATCTCCGTTC...AGAAAGCAGTGCGACTGAACGCCAGGCTTGCATTGCCATTTGGGAACAAAAGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113966.8 |
||
| CDS-3UTR CCA 90 bp | CTCTTTTGTTCCCAAATGGCAATGCAAGCCTGGCGTTCAGTCGCACTGCTTTCTCTAGAGCTGTGGAGGTaGCTGCAGCCATTGAAATGG | + |
|
Preference number: 4 (lower is better) Translates to: LFCSQMAMQAWRSVALLSLELWR*LQPLKW Trigger: CCATTTCAATGGCTGCAGCCACCTCCACAGCTCTAG...AGAAAGCAGTGCGACTGAACGCCAGGCTTGCATTGCCATTTGGGAACAAAAGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113966.8 |
||
| CDS-3UTR CCA 90 bp | TTCTCTCTCTCTTTTGTTCCCAAATGGCAATGCAAGCCTGGCGTTCAGTCGCACATGGCACTGTTTGTGTaGGCTTCGTCTGGATTCGGC | + |
|
Preference number: 4 (lower is better) Translates to: FSLSFVPKWQCKPGVQSHMALFV*ASSGFG Trigger: GCCGAATCCAGACGAAGCCCACACAAACAGTGCCAT...GTGCGACTGAACGCCAGGCTTGCATTGCCATTTGGGAACAAAAGAGAGAGAGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113966.8 |
||
| CDS-3UTR CCA 90 bp | CTCTTTTGTTCCCAAATGGCAATGCAAGCCTGGCGTTCAGTCGCACTGCTTTCTGCAACAACGGCAGGATaGCACTGTTTGTGTGGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: LFCSQMAMQAWRSVALLSATTAG*HCLCGL Trigger: AAGCCCACACAAACAGTGCCATCCTGCCGTTGTTGC...AGAAAGCAGTGCGACTGAACGCCAGGCTTGCATTGCCATTTGGGAACAAAAGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113966.8 |
||
| CDS-3UTR GCA 90 bp | TTCTCTCTCTCTTTTGTTCCCAAATGGCAATGCAAGCCTGGCGTTCAGTCGCACTTTCCAGCTCAAAGATaGTCCAGCCCCTTCGAACTA | + |
|
Preference number: 4 (lower is better) Translates to: FSLSFVPKWQCKPGVQSHFPAQR*SSPFEL Trigger: TAGTTCGAAGGGGCTGGAGCATCTTTGAGCTGGAAA...GTGCGACTGAACGCCAGGCTTGCATTGCCATTTGGGAACAAAAGAGAGAGAGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113966.8 |
||
| CDS-3UTR GCA 90 bp | TTCTCTCTCTCTTTTGTTCCCAAATGGCAATGCAAGCCTGGCGTTCAGTCGCACTTTGTCTGTGGCCGCTaGCCATTGATGAGTGTCATA | + |
|
Preference number: 4 (lower is better) Translates to: FSLSFVPKWQCKPGVQSHFVCGR*PLMSVI Trigger: TATGACACTCATCAATGGGCAGCGGCCACAGACAAA...GTGCGACTGAACGCCAGGCTTGCATTGCCATTTGGGAACAAAAGAGAGAGAGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113966.8 |
||
| CDS-3UTR CCA 90 bp | TTCTCTCTCTCTTTTGTTCCCAAATGGCAATGCAAGCCTGGCGTTCAGTCGCACTCACACTGGATATACTaGTCTCCCTTGGCAACAACG | + |
|
Preference number: 4 (lower is better) Translates to: FSLSFVPKWQCKPGVQSHSHWIY*SPLATT Trigger: CGTTGTTGCCAAGGGAGACCAGTATATCCAGTGTGA...GTGCGACTGAACGCCAGGCTTGCATTGCCATTTGGGAACAAAAGAGAGAGAGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113966.8 |
||
| CDS-3UTR TCA 90 bp | TTCTCTCTCTCTTTTGTTCCCAAATGGCAATGCAAGCCTGGCGTTCAGTCGCACGCAAGGTATCTCTTTTaGAGACAATACTTGGTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: FSLSFVPKWQCKPGVQSHARYLF*RQYLVS Trigger: GGAGACCAAGTATTGTCTTCAAAAGAGATACCTTGC...GTGCGACTGAACGCCAGGCTTGCATTGCCATTTGGGAACAAAAGAGAGAGAGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113966.8 |
||
| CDS-3UTR TCA 90 bp | ACAACATACAAAGGTCTTCTCTGCCTGTTGAAGACCAAAGGGATGGGATACAAATCTTCCCCAGTCTCTTaGTTCCACTGGTCAGGATCC | + |
|
Preference number: 4 (lower is better) Translates to: TTYKGLLCLLKTKGMGYKSSPVS*FHWSGS Trigger: GGATCCTGACCAGTGGAATCAAGAGACTGGGGAAGA...TTTGTATCCCATCCCTTTGGTCTTCAACAGGCAGAGAAGACCTTTGTATGTTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113966.8 |
||
| CDS-3UTR TCA 90 bp | ACAACATACAAAGGTCTTCTCTGCCTGTTGAAGACCAAAGGGATGGGATACAAAAAGGCCCCTGCTCACTaGCATCTAAAGCCTGCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: TTYKGLLCLLKTKGMGYKKAPAH*HLKPAH Trigger: ATGAGCAGGCTTTAGATGTCAGTGAGCAGGGGCCTT...TTTGTATCCCATCCCTTTGGTCTTCAACAGGCAGAGAAGACCTTTGTATGTTGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000113966.8 |
||
| CDS-3UTR GCA 90 bp | ACAACATACAAAGGTCTTCTCTGCCTGTTGAAGACCAAAGGGATGGGATACAAAAGAAGCTTGATGGTATaGTTGAGGGCCTCCACCTCC | + |
|
Preference number: 4 (lower is better) Translates to: TTYKGLLCLLKTKGMGYKRSLMV*LRASTS Trigger: GGAGGTGGAGGCCCTCAAGCATACCATCAAGCTTCT...TTTGTATCCCATCCCTTTGGTCTTCAACAGGCAGAGAAGACCTTTGTATGTTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113966.8 |
||
| CDS-3UTR CCA 90 bp | ACAACATACAAAGGTCTTCTCTGCCTGTTGAAGACCAAAGGGATGGGATACAAACTGCAGCCATTGAAATaGCCGAGACAGTCTGCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: TTYKGLLCLLKTKGMGYKLQPLK*PRQSAA Trigger: AGCTGCAGACTGTCTCGGCCATTTCAATGGCTGCAG...TTTGTATCCCATCCCTTTGGTCTTCAACAGGCAGAGAAGACCTTTGTATGTTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113966.8 |
||
| CDS-3UTR CCA 90 bp | ACAACATACAAAGGTCTTCTCTGCCTGTTGAAGACCAAAGGGATGGGATACAAATATACTGGTCTCCCTTaGCAACAACGGCAGGATGGC | + |
|
Preference number: 4 (lower is better) Translates to: TTYKGLLCLLKTKGMGYKYTGLP*QQRQDG Trigger: GCCATCCTGCCGTTGTTGCCAAGGGAGACCAGTATA...TTTGTATCCCATCCCTTTGGTCTTCAACAGGCAGAGAAGACCTTTGTATGTTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113966.8 |
||
| 3UTR CAA 72 bp | TTGCCACATTTCCACTCTTGTGAGTATTGGGGGAGTTaGGAATCCAGTCCAATGCCAAGTGTCCATAGTACG | + |
|
Preference number: 4 (lower is better) Translates to: LPHFHSCEYWGS*ESSPMPSVHST Trigger: CGTACTATGGACACTTGGCATTGGACTGGATTCCAAACTCCCCCAATACTCACAAGAGTGGAAATGTGGCAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000113966.8 |
||
| CDS-3UTR GCA 90 bp | CTCTTTTGTTCCCAAATGGCAATGCAAGCCTGGCGTTCAGTCGCACTGCTTTCTTCGAGTTCAACTTGTTaGATTTTGGTCCATGCCATT | + |
|
Preference number: 4 (lower is better) Translates to: LFCSQMAMQAWRSVALLSSSSTC*ILVHAI Trigger: AATGGCATGGACCAAAATGCAACAAGTTGAACTCGA...AGAAAGCAGTGCGACTGAACGCCAGGCTTGCATTGCCATTTGGGAACAAAAGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113966.8 |
||
| CDS-3UTR CCA 90 bp | AAACAGGCAATACCAAATATCACACGTGTCCAAGTCTGGAAGTCCATTCTTTCCTATGAAGGAGAACACTaGCATGCCGACGTCCGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: KQAIPNITRVQVWKSILSYEGEH*HADVRF Trigger: GAAACGGACGTCGGCATGCCAGTGTTCTCCTTCATA...GGAAAGAATGGACTTCCAGACTTGGACACGTGTGATATTTGGTATTGCCTGTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113966.8 |
||
| CDS-3UTR CCA 90 bp | TTCTCTCTCTCTTTTGTTCCCAAATGGCAATGCAAGCCTGGCGTTCAGTCGCACAATGTATGTTCCAGTTaGGATCAGATCTCTATCTGG | + |
|
Preference number: 4 (lower is better) Translates to: FSLSFVPKWQCKPGVQSHNVCSS*DQISIW Trigger: CCAGATAGAGATCTGATCCCAACTGGAACATACATT...GTGCGACTGAACGCCAGGCTTGCATTGCCATTTGGGAACAAAAGAGAGAGAGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113966.8 |
||
| CDS-3UTR CCA 90 bp | CTTCTGACAGTCTTTACCATAGAGCATAGGTTTTCACTCTGCAATGAACAAAATGATCTGGATGGGCAGTaGCTAGAGCTGTGGAGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: LLTVFTIEHRFSLCNEQNDLDGQ*LELWRW Trigger: CCACCTCCACAGCTCTAGCCACTGCCCATCCAGATC...ATTTTGTTCATTGCAGAGTGAAAACCTATGCTCTATGGTAAAGACTGTCAGAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113966.8 |
||
| 3UTR CAA 72 bp | GAGAGGATCCGGTGCTCCTTGTCCCATCAGATAGATTaGTCCAAGCACCCCAAGGAAATGTTAAAAGCAAAA | + |
|
Preference number: 4 (lower is better) Translates to: ERIRCSLSHQID*SKHPKEMLKAK Trigger: TTTTGCTTTTAACATTTCCTTGGGGTGCTTGGACAAATCTATCTGATGGGACAAGGAGCACCGGATCCTCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113966.8 |
||
| CDS-3UTR GCA 90 bp | TTCTCTCTCTCTTTTGTTCCCAAATGGCAATGCAAGCCTGGCGTTCAGTCGCACTTGCATTTTGGTCCATaGCATTTAATAACCGTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: FSLSFVPKWQCKPGVQSHLHFGP*HLITVR Trigger: TCTGACGGTTATTAAATGGCATGGACCAAAATGCAA...GTGCGACTGAACGCCAGGCTTGCATTGCCATTTGGGAACAAAAGAGAGAGAGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113966.8 |
||
| CDS-3UTR CCA 90 bp | TTCTCTCTCTCTTTTGTTCCCAAATGGCAATGCAAGCCTGGCGTTCAGTCGCACTCTCCCACCAAAACTTaGTACTTCTTGATATCAACA | + |
|
Preference number: 4 (lower is better) Translates to: FSLSFVPKWQCKPGVQSHSPTKT*YFLIST Trigger: TGTTGATATCAAGAAGTACCAAGTTTTGGTGGGAGA...GTGCGACTGAACGCCAGGCTTGCATTGCCATTTGGGAACAAAAGAGAGAGAGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113966.8 |
||
| 3UTR CAA 72 bp | AAGCAAATAAAAATCAATGCACGTCCCAAGGCTCCTTaGCCTTGTCACACAGACACTGAGACCTTTGCATTG | + |
|
Preference number: 4 (lower is better) Translates to: KQIKINARPKAP*PCHTDTETFAL Trigger: CAATGCAAAGGTCTCAGTGTCTGTGTGACAAGGCAAAGGAGCCTTGGGACGTGCATTGATTTTTATTTGCTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000113966.8 |
||
| CDS-3UTR TCA 90 bp | AAACAGGCAATACCAAATATCACACGTGTCCAAGTCTGGAAGTCCATTCTTTCCTTCTCCCACTGTCAGTaGGATGGAGACTTTCATACA | + |
|
Preference number: 4 (lower is better) Translates to: KQAIPNITRVQVWKSILSFSHCQ*DGDFHT Trigger: TGTATGAAAGTCTCCATCTCACTGACAGTGGGAGAA...GGAAAGAATGGACTTCCAGACTTGGACACGTGTGATATTTGGTATTGCCTGTTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113966.8 |
||
| CDS-3UTR GCA 90 bp | TTCTCTCTCTCTTTTGTTCCCAAATGGCAATGCAAGCCTGGCGTTCAGTCGCACAATACTTGGTCTCCATaGTTTTGTTCTACATTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: FSLSFVPKWQCKPGVQSHNTWSP*FCSTFL Trigger: AAGGAATGTAGAACAAAAGCATGGAGACCAAGTATT...GTGCGACTGAACGCCAGGCTTGCATTGCCATTTGGGAACAAAAGAGAGAGAGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113966.8 |
||
| CDS-3UTR CCA 90 bp | TTCTCTCTCTCTTTTGTTCCCAAATGGCAATGCAAGCCTGGCGTTCAGTCGCACTCGAACTACATAATTTaGGGTCATGACAATAATCAG | + |
|
Preference number: 4 (lower is better) Translates to: FSLSFVPKWQCKPGVQSHSNYII*GHDNNQ Trigger: CTGATTATTGTCATGACCCCAAATTATGTAGTTCGA...GTGCGACTGAACGCCAGGCTTGCATTGCCATTTGGGAACAAAAGAGAGAGAGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113966.8 |
||
| CDS-3UTR CCA 90 bp | TTCTCTCTCTCTTTTGTTCCCAAATGGCAATGCAAGCCTGGCGTTCAGTCGCACCAACTTGTTGCATTTTaGTCCATGCCATTTAATAAC | + |
|
Preference number: 4 (lower is better) Translates to: FSLSFVPKWQCKPGVQSHQLVAF*SMPFNN Trigger: GTTATTAAATGGCATGGACCAAAATGCAACAAGTTG...GTGCGACTGAACGCCAGGCTTGCATTGCCATTTGGGAACAAAAGAGAGAGAGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113966.8 |
||
| 3UTR CAA 72 bp | ATTGTAATGCATGTTTTTAACAGCAGCAGTCGAGGATaGAGTTCCAGGCACTGGACTGCAGATTCCTTTCAA | + |
|
Preference number: 4 (lower is better) Translates to: IVMHVFNSSSRG*SSRHWTADSFQ Trigger: TTGAAAGGAATCTGCAGTCCAGTGCCTGGAACTCAATCCTCGACTGCTGCTGTTAAAAACATGCATTACAAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000113966.8 |
||
| CDS-3UTR TCA 90 bp | AAACAGGCAATACCAAATATCACACGTGTCCAAGTCTGGAAGTCCATTCTTTCCACAACCTTCAGACTCTaGGTGAAAGTAGCATATAAG | + |
|
Preference number: 4 (lower is better) Translates to: KQAIPNITRVQVWKSILSTTFRL*VKVAYK Trigger: CTTATATGCTACTTTCACTCAGAGTCTGAAGGTTGT...GGAAAGAATGGACTTCCAGACTTGGACACGTGTGATATTTGGTATTGCCTGTTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113966.8 |
||
| CDS-3UTR TCA 90 bp | CTTCTGACAGTCTTTACCATAGAGCATAGGTTTTCACTCTGCAATGAACAAAATTATACCACATTAAGCTaGGTCCAGCACTTTGGGCGA | + |
|
Preference number: 4 (lower is better) Translates to: LLTVFTIEHRFSLCNEQNYTTLS*VQHFGR Trigger: TCGCCCAAAGTGCTGGACTCAGCTTAATGTGGTATA...ATTTTGTTCATTGCAGAGTGAAAACCTATGCTCTATGGTAAAGACTGTCAGAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113966.8 |
||
| CDS-3UTR TCA 90 bp | CTTCTGACAGTCTTTACCATAGAGCATAGGTTTTCACTCTGCAATGAACAAAATATCAGCCGCTTACTTTaGTCTACGCATCTAGCCACA | + |
|
Preference number: 4 (lower is better) Translates to: LLTVFTIEHRFSLCNEQNISRLL*STHLAT Trigger: TGTGGCTAGATGCGTAGATCAAAGTAAGCGGCTGAT...ATTTTGTTCATTGCAGAGTGAAAACCTATGCTCTATGGTAAAGACTGTCAGAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113966.8 |
||
| CDS-3UTR GCA 90 bp | CTTCTGACAGTCTTTACCATAGAGCATAGGTTTTCACTCTGCAATGAACAAAATCAACAGACCAATCTGTaGATCCATCAGCAGAACCTC | + |
|
Preference number: 4 (lower is better) Translates to: LLTVFTIEHRFSLCNEQNQQTNL*IHQQNL Trigger: GAGGTTCTGCTGATGGATGCACAGATTGGTCTGTTG...ATTTTGTTCATTGCAGAGTGAAAACCTATGCTCTATGGTAAAGACTGTCAGAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113966.8 |
||
| CDS-3UTR CCA 90 bp | ACAACATACAAAGGTCTTCTCTGCCTGTTGAAGACCAAAGGGATGGGATACAAAGGATTTCAGGTTCCCTaGTTGGTAATAAAAAGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: TTYKGLLCLLKTKGMGYKGFQVP*LVIKSP Trigger: AGGACTTTTTATTACCAACCAGGGAACCTGAAATCC...TTTGTATCCCATCCCTTTGGTCTTCAACAGGCAGAGAAGACCTTTGTATGTTGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000113966.8 |
||
| CDS-3UTR GCA 90 bp | CTTCTGACAGTCTTTACCATAGAGCATAGGTTTTCACTCTGCAATGAACAAAATCTGACATCTAAAGCCTaGTCATGTGTAATGGGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: LLTVFTIEHRFSLCNEQNLTSKA*SCVMGS Trigger: AGAACCCATTACACATGAGCAGGCTTTAGATGTCAG...ATTTTGTTCATTGCAGAGTGAAAACCTATGCTCTATGGTAAAGACTGTCAGAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113966.8 |
||
| CDS-3UTR TCA 90 bp | CTTCTGACAGTCTTTACCATAGAGCATAGGTTTTCACTCTGCAATGAACAAAATTTTCTGACGCATTTGTaGATGGTAGGTGTTATGAAA | + |
|
Preference number: 4 (lower is better) Translates to: LLTVFTIEHRFSLCNEQNFLTHL*MVGVMK Trigger: TTTCATAACACCTACCATTCACAAATGCGTCAGAAA...ATTTTGTTCATTGCAGAGTGAAAACCTATGCTCTATGGTAAAGACTGTCAGAAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000113966.8 |
||
| CDS-3UTR CCA 90 bp | CTTCTGACAGTCTTTACCATAGAGCATAGGTTTTCACTCTGCAATGAACAAAATTTTGAAGACAATACTTaGTCTCCATGCTTTTGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: LLTVFTIEHRFSLCNEQNFEDNT*SPCFCS Trigger: AGAACAAAAGCATGGAGACCAAGTATTGTCTTCAAA...ATTTTGTTCATTGCAGAGTGAAAACCTATGCTCTATGGTAAAGACTGTCAGAAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000113966.8 |
||
| CDS CCA 90 bp | CCTTGGCAACAACGGCAGGATGGCACTGTTTGTGTGGGCTTCGTCTaGATTCGGCTCCCTGTTCGACTTTGTCTGTGGCCGCTGCCCATT | + |
|
Preference number: 5 (lower is better) Translates to: PWQQRQDGTVCVGFV*IRLPVRLCLWPLPI Trigger: AATGGGCAGCGGCCACAGACAAAGTCGAACAGGGAGCCGAATCCAGACGAAGCCCACACAAACAGTGCCATCCTGCCGTTGTTGCCAAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078875.8 ENSMUST00000113966.8 |
||
| CDS CCA 90 bp | ATACTGGTCTCCCTTGGCAACAACGGCAGGATGGCACTGTTTGTGTaGGCTTCGTCTGGATTCGGCTCCCTGTTCGACTTTGTCTGTGGC | + |
|
Preference number: 5 (lower is better) Translates to: ILVSLGNNGRMALFV*ASSGFGSLFDFVCG Trigger: GCCACAGACAAAGTCGAACAGGGAGCCGAATCCAGACGAAGCCCACACAAACAGTGCCATCCTGCCGTTGTTGCCAAGGGAGACCAGTAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078875.8 ENSMUST00000113966.8 |
||
| CDS CCA 90 bp | AGATCACACTGGATATACTGGTCTCCCTTGGCAACAACGGCAGGATaGCACTGTTTGTGTGGGCTTCGTCTGGATTCGGCTCCCTGTTCG | + |
|
Preference number: 5 (lower is better) Translates to: RSHWIYWSPLATTAG*HCLCGLRLDSAPCS Trigger: CGAACAGGGAGCCGAATCCAGACGAAGCCCACACAAACAGTGCCATCCTGCCGTTGTTGCCAAGGGAGACCAGTATATCCAGTGTGATCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078875.8 ENSMUST00000113966.8 |
||
| CDS CCA 90 bp | TGTGTGGGCTTCGTCTGGATTCGGCTCCCTGTTCGACTTTGTCTGTaGCCGCTGCCCATTGATGAGTGTCATAGGGATGTTACAGTAGGT | + |
|
Preference number: 5 (lower is better) Translates to: CVGFVWIRLPVRLCL*PLPIDECHRDVTVG Trigger: ACCTACTGTAACATCCCTATGACACTCATCAATGGGCAGCGGCCACAGACAAAGTCGAACAGGGAGCCGAATCCAGACGAAGCCCACACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078875.8 ENSMUST00000113966.8 |
||
| CDS-3UTR CAA 90 bp | TTCTCTCTCTCTTTTGTTCCCAAATGGCAATGCAAGCCTGGCGTTCAGTCGCACAGCTTGATGGTATGCTaGAGGGCCTCCACCTCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: FSLSFVPKWQCKPGVQSHSLMVC*RASTSW Trigger: CCAGGAGGTGGAGGCCCTCAAGCATACCATCAAGCT...GTGCGACTGAACGCCAGGCTTGCATTGCCATTTGGGAACAAAAGAGAGAGAGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113966.8 |
||
| CDS-3UTR CAA 90 bp | TTCTCTCTCTCTTTTGTTCCCAAATGGCAATGCAAGCCTGGCGTTCAGTCGCACAGGTGGCTGCAGCCATaGAAATGGCCGAGACAGTCT | + |
|
Preference number: 5 (lower is better) Translates to: FSLSFVPKWQCKPGVQSHRWLQP*KWPRQS Trigger: AGACTGTCTCGGCCATTTCAATGGCTGCAGCCACCT...GTGCGACTGAACGCCAGGCTTGCATTGCCATTTGGGAACAAAAGAGAGAGAGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113966.8 |
||
| CDS-3UTR CAA 90 bp | CTCTTTTGTTCCCAAATGGCAATGCAAGCCTGGCGTTCAGTCGCACTGCTTTCTGCAGGATGGCACTGTTaGTGTGGGCTTCGTCTGGAT | + |
|
Preference number: 5 (lower is better) Translates to: LFCSQMAMQAWRSVALLSAGWHC*CGLRLD Trigger: ATCCAGACGAAGCCCACACAAACAGTGCCATCCTGC...AGAAAGCAGTGCGACTGAACGCCAGGCTTGCATTGCCATTTGGGAACAAAAGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113966.8 |
||
| CDS-3UTR CAA 90 bp | TTCTCTCTCTCTTTTGTTCCCAAATGGCAATGCAAGCCTGGCGTTCAGTCGCACATATACTGGTCTCCCTaGGCAACAACGGCAGGATGG | + |
|
Preference number: 5 (lower is better) Translates to: FSLSFVPKWQCKPGVQSHIYWSP*ATTAGW Trigger: CCATCCTGCCGTTGTTGCCAAGGGAGACCAGTATAT...GTGCGACTGAACGCCAGGCTTGCATTGCCATTTGGGAACAAAAGAGAGAGAGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113966.8 |
||
| CDS-3UTR CAA 90 bp | ACAACATACAAAGGTCTTCTCTGCCTGTTGAAGACCAAAGGGATGGGATACAAAGCTCCCTGTTCGACTTaGTCTGTGGCCGCTGCCCAT | + |
|
Preference number: 5 (lower is better) Translates to: TTYKGLLCLLKTKGMGYKAPCST*SVAAAH Trigger: ATGGGCAGCGGCCACAGACAAAGTCGAACAGGGAGC...TTTGTATCCCATCCCTTTGGTCTTCAACAGGCAGAGAAGACCTTTGTATGTTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113966.8 |
||
| CDS CCA 90 bp | CATAGGGATGTTACAGTAGGTATGCTGATTTCCTATGGAGGTAAGTaGCAGGGTGCCCGTAGGAGGTACGTCGTACTCATAGCTTCGATA | + |
|
Preference number: 5 (lower is better) Translates to: HRDVTVGMLISYGGK*QGARRRYVVLIASI Trigger: TATCGAAGCTATGAGTACGACGTACCTCCTACGGGCACCCTGCCACTTACCTCCATAGGAAATCAGCATACCTACTGTAACATCCCTATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078875.8 ENSMUST00000113966.8 |
||
| CDS-3UTR CAA 90 bp | TTCTCTCTCTCTTTTGTTCCCAAATGGCAATGCAAGCCTGGCGTTCAGTCGCACAATCAGCCGCTTACTTaGATCTACGCATCTAGCCAC | + |
|
Preference number: 5 (lower is better) Translates to: FSLSFVPKWQCKPGVQSHNQPLT*IYASSH Trigger: GTGGCTAGATGCGTAGATCAAAGTAAGCGGCTGATT...GTGCGACTGAACGCCAGGCTTGCATTGCCATTTGGGAACAAAAGAGAGAGAGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113966.8 |
||
| CDS-3UTR CAA 90 bp | AAACAGGCAATACCAAATATCACACGTGTCCAAGTCTGGAAGTCCATTCTTTCCTGTGGCCGCTGCCCATaGATGAGTGTCATAGGGATG | + |
|
Preference number: 5 (lower is better) Translates to: KQAIPNITRVQVWKSILSCGRCP*MSVIGM Trigger: CATCCCTATGACACTCATCAATGGGCAGCGGCCACA...GGAAAGAATGGACTTCCAGACTTGGACACGTGTGATATTTGGTATTGCCTGTTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113966.8 |
||
| CDS-3UTR CAA 90 bp | CTCTTTTGTTCCCAAATGGCAATGCAAGCCTGGCGTTCAGTCGCACTGCTTTCTTTGGTCTCCATGCTTTaGTTCTACATTCCTTGTACC | + |
|
Preference number: 5 (lower is better) Translates to: LFCSQMAMQAWRSVALLSLVSML*FYIPCT Trigger: GGTACAAGGAATGTAGAACAAAAGCATGGAGACCAA...AGAAAGCAGTGCGACTGAACGCCAGGCTTGCATTGCCATTTGGGAACAAAAGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113966.8 |
||
| CDS TCA 90 bp | TGGAGTGTTAGTTCAATGGATCGTAGTTTTCCAGCAGCTCGTTTATaGAGGAGAACACTGGCATGCCGACGTCCGTTTCCATTTTCAACA | + |
|
Preference number: 5 (lower is better) Translates to: WSVSSMDRSFPAARL*RRTLACRRPFPFST Trigger: TGTTGAAAATGGAAACGGACGTCGGCATGCCAGTGTTCTCCTTCATAAACGAGCTGCTGGAAAACTACGATCCATTGAACTAACACTCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113964.2 |
||
| CDS CCA 90 bp | CGTTTCCAGCTCAAAGATGCTCCAGCCCCTTCGAACTACATAATTTaGGGTCATGACAATAATCAGCCGCTTACTTTGATCTACGCATCT | + |
|
Preference number: 5 (lower is better) Translates to: RFQLKDAPAPSNYII*GHDNNQPLTLIYAS Trigger: AGATGCGTAGATCAAAGTAAGCGGCTGATTATTGTCATGACCCCAAATTATGTAGTTCGAAGGGGCTGGAGCATCTTTGAGCTGGAAACG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000078875.8 ENSMUST00000113966.8 |
||
| CDS-3UTR CAA 90 bp | TTCTCTCTCTCTTTTGTTCCCAAATGGCAATGCAAGCCTGGCGTTCAGTCGCACGGGCGAGCGAGTAGTTaGTTCTTATATAACCATAAA | + |
|
Preference number: 5 (lower is better) Translates to: FSLSFVPKWQCKPGVQSHGRASS*FLYNHK Trigger: TTTATGGTTATATAAGAACAAACTACTCGCTCGCCC...GTGCGACTGAACGCCAGGCTTGCATTGCCATTTGGGAACAAAAGAGAGAGAGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113966.8 |
||
| CDS TCA 90 bp | TACGTCGTACTCATAGCTTCGATAGTAGTGTTTCTGACGCATTTGTaGATGGTAGGTGTTATGAAAGGTAGAACGGAGATCTGGATGGGC | + |
|
Preference number: 5 (lower is better) Translates to: YVVLIASIVVFLTHL*MVGVMKGRTEIWMG Trigger: GCCCATCCAGATCTCCGTTCTACCTTTCATAACACCTACCATTCACAAATGCGTCAGAAACACTACTATCGAAGCTATGAGTACGACGTA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078875.8 ENSMUST00000113966.8 |
||
| CDS CCA 90 bp | CAATGGATCGTAGTTTTCCAGCAGCTCGTTTATGAAGGAGAACACTaGCATGCCGACGTCCGTTTCCATTTTCAACATAACAGGAATAGT | + |
|
Preference number: 5 (lower is better) Translates to: QWIVVFQQLVYEGEH*HADVRFHFQHNRNS Trigger: ACTATTCCTGTTATGTTGAAAATGGAAACGGACGTCGGCATGCCAGTGTTCTCCTTCATAAACGAGCTGCTGGAAAACTACGATCCATTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113964.2 |
||
| CDS-3UTR CAA 90 bp | CTTCTGACAGTCTTTACCATAGAGCATAGGTTTTCACTCTGCAATGAACAAAATGCTGAGTCCAGCACTTaGGGCGAGCGAGTAGTTTGT | + |
|
Preference number: 5 (lower is better) Translates to: LLTVFTIEHRFSLCNEQNAESST*GERVVC Trigger: ACAAACTACTCGCTCGCCCAAAGTGCTGGACTCAGC...ATTTTGTTCATTGCAGAGTGAAAACCTATGCTCTATGGTAAAGACTGTCAGAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113966.8 |
||
| CDS-3UTR CAA 90 bp | CTCTTTTGTTCCCAAATGGCAATGCAAGCCTGGCGTTCAGTCGCACTGCTTTCTTTTGTTCTACATTCCTaGTACCAAAGGATTTCAGGT | + |
|
Preference number: 5 (lower is better) Translates to: LFCSQMAMQAWRSVALLSFVLHS*YQRISG Trigger: ACCTGAAATCCTTTGGTACAAGGAATGTAGAACAAA...AGAAAGCAGTGCGACTGAACGCCAGGCTTGCATTGCCATTTGGGAACAAAAGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113966.8 |
||
| CDS TCA 90 bp | GTGCATCCATCAGCAGAACCTCTTTTAGTCACAACCTTCAGACTCTaGGTGAAAGTAGCATATAAGAGAATCAAATGTGGGATCGGAGCT | + |
|
Preference number: 5 (lower is better) Translates to: VHPSAEPLLVTTFRL*VKVAYKRIKCGIGA Trigger: AGCTCCGATCCCACATTTGATTCTCTTATATGCTACTTTCACTCAGAGTCTGAAGGTTGTGACTAAAAGAGGTTCTGCTGATGGATGCAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000078875.8 ENSMUST00000113964.2 ENSMUST00000113966.8 |
||
| CDS TCA 90 bp | GCTCTTCAAAATCTCCTGGACCAGAGCTTTTATACCACATTAAGCTaGGTCCAGCACTTTGGGCGAGCGAGTAGTTTGTTCTTATATAAC | + |
|
Preference number: 5 (lower is better) Translates to: ALQNLLDQSFYTTLS*VQHFGRASSLFLYN Trigger: GTTATATAAGAACAAACTACTCGCTCGCCCAAAGTGCTGGACTCAGCTTAATGTGGTATAAAAGCTCTGGTCCAGGAGATTTTGAAGAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000078875.8 ENSMUST00000113964.2 ENSMUST00000113966.8 |
||
| CDS GCA 90 bp | AAACGTTTCCAGAACTTCGAGTTCAACTTGTTGCATTTTGGTCCATaGCATTTAATAACCGTCAGAAGCTTGATGGTATGCTTGAGGGCC | + |
|
Preference number: 5 (lower is better) Translates to: KRFQNFEFNLLHFGP*HLITVRSLMVCLRA Trigger: GGCCCTCAAGCATACCATCAAGCTTCTGACGGTTATTAAATGGCATGGACCAAAATGCAACAAGTTGAACTCGAAGTTCTGGAAACGTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000078875.8 ENSMUST00000113966.8 |
||
| CDS TCA 90 bp | CTTGGAATTGTAGCAAAGTCCAGTGTCATTTTCTCCCACTGTCAGTaGGATGGAGACTTTCATACAGTATGTGGAATTCCTGATGACACA | + |
|
Preference number: 5 (lower is better) Translates to: LGIVAKSSVIFSHCQ*DGDFHTVCGIPDDT Trigger: TGTGTCATCAGGAATTCCACATACTGTATGAAAGTCTCCATCTCACTGACAGTGGGAGAAAATGACACTGGACTTTGCTACAATTCCAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000078875.8 ENSMUST00000113964.2 ENSMUST00000113966.8 |
||
| CDS CCA 90 bp | CAAGTTCAACGGTGTACATTAACTCTCGTTTATGAAGGAGAACACTaGCATGCCGACGTCCGTTTCCATTTTCAACATAACAGGAATAGT | + |
|
Preference number: 5 (lower is better) Translates to: QVQRCTLTLVYEGEH*HADVRFHFQHNRNS Trigger: ACTATTCCTGTTATGTTGAAAATGGAAACGGACGTCGGCATGCCAGTGTTCTCCTTCATAAACGAGAGTTAATGTACACCGTTGAACTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000078875.8 ENSMUST00000113966.8 |
||
| CDS-3UTR CAA 90 bp | CTTCTGACAGTCTTTACCATAGAGCATAGGTTTTCACTCTGCAATGAACAAAATATAACCGTCAGAAGCTaGATGGTATGCTTGAGGGCC | + |
|
Preference number: 5 (lower is better) Translates to: LLTVFTIEHRFSLCNEQNITVRS*MVCLRA Trigger: GGCCCTCAAGCATACCATCAAGCTTCTGACGGTTAT...ATTTTGTTCATTGCAGAGTGAAAACCTATGCTCTATGGTAAAGACTGTCAGAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113966.8 |
||
| CDS-3UTR CAA 90 bp | AAACAGGCAATACCAAATATCACACGTGTCCAAGTCTGGAAGTCCATTCTTTCCTTCTCCCACCAAAACTaGGTACTTCTTGATATCAAC | + |
|
Preference number: 5 (lower is better) Translates to: KQAIPNITRVQVWKSILSFSHQN*VLLDIN Trigger: GTTGATATCAAGAAGTACCAAGTTTTGGTGGGAGAA...GGAAAGAATGGACTTCCAGACTTGGACACGTGTGATATTTGGTATTGCCTGTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113966.8 |
||
| CDS GCA 90 bp | ACTTTGGGCGAGCGAGTAGTTTGTTCTTATATAACCATAAAAGAGTaGACACTTGATTCTAACAGGTTCTCCCACCAAAACTTGGTACTT | + |
|
Preference number: 5 (lower is better) Translates to: TLGERVVCSYITIKE*TLDSNRFSHQNLVL Trigger: AAGTACCAAGTTTTGGTGGGAGAACCTGTTAGAATCAAGTGTGCACTCTTTTATGGTTATATAAGAACAAACTACTCGCTCGCCCAAAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000078875.8 ENSMUST00000113964.2 ENSMUST00000113966.8 |
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| CDS-3UTR CAA 90 bp | CTTCTGACAGTCTTTACCATAGAGCATAGGTTTTCACTCTGCAATGAACAAAATCGGCATGAAATTTCCTaGCTTTTGCTAAGTTCAGCT | + |
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Preference number: 5 (lower is better) Translates to: LLTVFTIEHRFSLCNEQNRHEIS*LLLSSA Trigger: AGCTGAACTTAGCAAAAGCAAGGAAATTTCATGCCG...ATTTTGTTCATTGCAGAGTGAAAACCTATGCTCTATGGTAAAGACTGTCAGAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000113966.8 |
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| CDS-3UTR CAA 90 bp | CTTCTGACAGTCTTTACCATAGAGCATAGGTTTTCACTCTGCAATGAACAAAATCAATGTATGTTCCAGTaGGGATCAGATCTCTATCTG | + |
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Preference number: 5 (lower is better) Translates to: LLTVFTIEHRFSLCNEQNQCMFQ*GSDLYL Trigger: CAGATAGAGATCTGATCCCAACTGGAACATACATTG...ATTTTGTTCATTGCAGAGTGAAAACCTATGCTCTATGGTAAAGACTGTCAGAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113966.8 |
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| CDS-3UTR CAA 90 bp | CTTCTGACAGTCTTTACCATAGAGCATAGGTTTTCACTCTGCAATGAACAAAATAACTTCGAGTTCAACTaGTTGCATTTTGGTCCATGC | + |
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Preference number: 5 (lower is better) Translates to: LLTVFTIEHRFSLCNEQNNFEFN*LHFGPC Trigger: GCATGGACCAAAATGCAACAAGTTGAACTCGAAGTT...ATTTTGTTCATTGCAGAGTGAAAACCTATGCTCTATGGTAAAGACTGTCAGAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000113966.8 |
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| CDS-3UTR CAA 90 bp | CTTCTGACAGTCTTTACCATAGAGCATAGGTTTTCACTCTGCAATGAACAAAATATGGAATCTTCCTCTTaGCTCATTCTACTTCCATCA | + |
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Preference number: 5 (lower is better) Translates to: LLTVFTIEHRFSLCNEQNMESSS*LILLPS Trigger: TGATGGAAGTAGAATGAGCAAAGAGGAAGATTCCAT...ATTTTGTTCATTGCAGAGTGAAAACCTATGCTCTATGGTAAAGACTGTCAGAAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113966.8 |
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| CDS-3UTR CAA 90 bp | CTTCTGACAGTCTTTACCATAGAGCATAGGTTTTCACTCTGCAATGAACAAAATTTTCAGGTTCCCTGGTaGGTAATAAAAAGTCCTCTA | + |
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Preference number: 5 (lower is better) Translates to: LLTVFTIEHRFSLCNEQNFQVPW*VIKSPL Trigger: TAGAGGACTTTTTATTACCAACCAGGGAACCTGAAA...ATTTTGTTCATTGCAGAGTGAAAACCTATGCTCTATGGTAAAGACTGTCAGAAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000113966.8 |
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| CDS-3UTR CAA 90 bp | CTTCTGACAGTCTTTACCATAGAGCATAGGTTTTCACTCTGCAATGAACAAAATAGCAAGGTATCTCTTTaGAAGACAATACTTGGTCTC | + |
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Preference number: 5 (lower is better) Translates to: LLTVFTIEHRFSLCNEQNSKVSL*KTILGL Trigger: GAGACCAAGTATTGTCTTCAAAAGAGATACCTTGCT...ATTTTGTTCATTGCAGAGTGAAAACCTATGCTCTATGGTAAAGACTGTCAGAAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113966.8 |
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| CDS CCA 72 bp | CAACGGCAGGATGGCACTGTTTGTGTGGGCTTCGTCTaGATTCGGCTCCCTGTTCGACTTTGTCTGTGGCCG | + |
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Preference number: 6 (lower is better) Translates to: QRQDGTVCVGFV*IRLPVRLCLWP Trigger: CGGCCACAGACAAAGTCGAACAGGGAGCCGAATCCAGACGAAGCCCACACAAACAGTGCCATCCTGCCGTTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078875.8 ENSMUST00000113966.8 |
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| CDS CAA 72 bp | TGGTCTCCCTTGGCAACAACGGCAGGATGGCACTGTTaGTGTGGGCTTCGTCTGGATTCGGCTCCCTGTTCG | + |
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Preference number: 6 (lower is better) Translates to: WSPLATTAGWHC*CGLRLDSAPCS Trigger: CGAACAGGGAGCCGAATCCAGACGAAGCCCACACAAACAGTGCCATCCTGCCGTTGTTGCCAAGGGAGACCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078875.8 ENSMUST00000113966.8 |
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| CDS CCA 72 bp | TCCCTTGGCAACAACGGCAGGATGGCACTGTTTGTGTaGGCTTCGTCTGGATTCGGCTCCCTGTTCGACTTT | + |
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Preference number: 6 (lower is better) Translates to: SLGNNGRMALFV*ASSGFGSLFDF Trigger: AAAGTCGAACAGGGAGCCGAATCCAGACGAAGCCCACACAAACAGTGCCATCCTGCCGTTGTTGCCAAGGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078875.8 ENSMUST00000113966.8 |
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| CDS CAA 90 bp | TGGATATACTGGTCTCCCTTGGCAACAACGGCAGGATGGCACTGTTaGTGTGGGCTTCGTCTGGATTCGGCTCCCTGTTCGACTTTGTCT | + |
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Preference number: 6 (lower is better) Translates to: WIYWSPLATTAGWHC*CGLRLDSAPCSTLS Trigger: AGACAAAGTCGAACAGGGAGCCGAATCCAGACGAAGCCCACACAAACAGTGCCATCCTGCCGTTGTTGCCAAGGGAGACCAGTATATCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078875.8 ENSMUST00000113966.8 |
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| CDS CCA 72 bp | TTCGTCTGGATTCGGCTCCCTGTTCGACTTTGTCTGTaGCCGCTGCCCATTGATGAGTGTCATAGGGATGTT | + |
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Preference number: 6 (lower is better) Translates to: FVWIRLPVRLCL*PLPIDECHRDV Trigger: AACATCCCTATGACACTCATCAATGGGCAGCGGCCACAGACAAAGTCGAACAGGGAGCCGAATCCAGACGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078875.8 ENSMUST00000113966.8 |
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| CDS CCA 72 bp | GTTACAGTAGGTATGCTGATTTCCTATGGAGGTAAGTaGCAGGGTGCCCGTAGGAGGTACGTCGTACTCATA | + |
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Preference number: 6 (lower is better) Translates to: VTVGMLISYGGK*QGARRRYVVLI Trigger: TATGAGTACGACGTACCTCCTACGGGCACCCTGCCACTTACCTCCATAGGAAATCAGCATACCTACTGTAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078875.8 ENSMUST00000113966.8 |
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| CDS TCA 72 bp | CCAGCAAGTTCAACGGTGTACATTAACTCTCGTTTATaGAGGAGAACACTGGCATGCCGACGTCCGTTTCCA | + |
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Preference number: 6 (lower is better) Translates to: PASSTVYINSRL*RRTLACRRPFP Trigger: TGGAAACGGACGTCGGCATGCCAGTGTTCTCCTTCATAAACGAGAGTTAATGTACACCGTTGAACTTGCTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078875.8 ENSMUST00000113966.8 |
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| CDS TCA 72 bp | AGTTCAATGGATCGTAGTTTTCCAGCAGCTCGTTTATaGAGGAGAACACTGGCATGCCGACGTCCGTTTCCA | + |
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Preference number: 6 (lower is better) Translates to: SSMDRSFPAARL*RRTLACRRPFP Trigger: TGGAAACGGACGTCGGCATGCCAGTGTTCTCCTTCATAAACGAGCTGCTGGAAAACTACGATCCATTGAACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113964.2 |
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| CDS TCA 72 bp | AATCTCCTGGACCAGAGCTTTTATACCACATTAAGCTaGGTCCAGCACTTTGGGCGAGCGAGTAGTTTGTTC | + |
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Preference number: 6 (lower is better) Translates to: NLLDQSFYTTLS*VQHFGRASSLF Trigger: GAACAAACTACTCGCTCGCCCAAAGTGCTGGACTCAGCTTAATGTGGTATAAAAGCTCTGGTCCAGGAGATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000078875.8 ENSMUST00000113964.2 ENSMUST00000113966.8 |
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| CDS GCA 72 bp | CAAGCATGTTTCGAAGTCTCGTTTCCAGCTCAAAGATaGTCCAGCCCCTTCGAACTACATAATTTGGGGTCA | + |
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Preference number: 6 (lower is better) Translates to: QACFEVSFPAQR*SSPFELHNLGS Trigger: TGACCCCAAATTATGTAGTTCGAAGGGGCTGGAGCATCTTTGAGCTGGAAACGAGACTTCGAAACATGCTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000078875.8 ENSMUST00000113966.8 |
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| CDS CCA 72 bp | GTAGTTTTCCAGCAGCTCGTTTATGAAGGAGAACACTaGCATGCCGACGTCCGTTTCCATTTTCAACATAAC | + |
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Preference number: 6 (lower is better) Translates to: VVFQQLVYEGEH*HADVRFHFQHN Trigger: GTTATGTTGAAAATGGAAACGGACGTCGGCATGCCAGTGTTCTCCTTCATAAACGAGCTGCTGGAAAACTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113964.2 |
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| CDS CCA 72 bp | CGGTGTACATTAACTCTCGTTTATGAAGGAGAACACTaGCATGCCGACGTCCGTTTCCATTTTCAACATAAC | + |
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Preference number: 6 (lower is better) Translates to: RCTLTLVYEGEH*HADVRFHFQHN Trigger: GTTATGTTGAAAATGGAAACGGACGTCGGCATGCCAGTGTTCTCCTTCATAAACGAGAGTTAATGTACACCG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000078875.8 ENSMUST00000113966.8 |
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| CDS CCA 72 bp | CTCAAAGATGCTCCAGCCCCTTCGAACTACATAATTTaGGGTCATGACAATAATCAGCCGCTTACTTTGATC | + |
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Preference number: 6 (lower is better) Translates to: LKDAPAPSNYII*GHDNNQPLTLI Trigger: GATCAAAGTAAGCGGCTGATTATTGTCATGACCCCAAATTATGTAGTTCGAAGGGGCTGGAGCATCTTTGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000078875.8 ENSMUST00000113966.8 |
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| CDS CAA 90 bp | GCACACTTGATTCTAACAGGTTCTCCCACCAAAACTTGGTACTTCTaGATATCAACAGACCAATCTGTGCATCCATCAGCAGAACCTCTT | + |
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Preference number: 6 (lower is better) Translates to: AHLILTGSPTKTWYF*ISTDQSVHPSAEPL Trigger: AAGAGGTTCTGCTGATGGATGCACAGATTGGTCTGTTGATATCAAGAAGTACCAAGTTTTGGTGGGAGAACCTGTTAGAATCAAGTGTGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000078875.8 ENSMUST00000113964.2 ENSMUST00000113966.8 |
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| CDS TCA 72 bp | GTAGCAAAGTCCAGTGTCATTTTCTCCCACTGTCAGTaGGATGGAGACTTTCATACAGTATGTGGAATTCCT | + |
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Preference number: 6 (lower is better) Translates to: VAKSSVIFSHCQ*DGDFHTVCGIP Trigger: AGGAATTCCACATACTGTATGAAAGTCTCCATCTCACTGACAGTGGGAGAAAATGACACTGGACTTTGCTAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000078875.8 ENSMUST00000113964.2 ENSMUST00000113966.8 |
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| CDS TCA 72 bp | CTCATAGCTTCGATAGTAGTGTTTCTGACGCATTTGTaGATGGTAGGTGTTATGAAAGGTAGAACGGAGATC | + |
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Preference number: 6 (lower is better) Translates to: LIASIVVFLTHL*MVGVMKGRTEI Trigger: GATCTCCGTTCTACCTTTCATAACACCTACCATTCACAAATGCGTCAGAAACACTACTATCGAAGCTATGAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078875.8 ENSMUST00000113966.8 |
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| CDS GCA 72 bp | CAGAACTTCGAGTTCAACTTGTTGCATTTTGGTCCATaGCATTTAATAACCGTCAGAAGCTTGATGGTATGC | + |
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Preference number: 6 (lower is better) Translates to: QNFEFNLLHFGP*HLITVRSLMVC Trigger: GCATACCATCAAGCTTCTGACGGTTATTAAATGGCATGGACCAAAATGCAACAAGTTGAACTCGAAGTTCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000078875.8 ENSMUST00000113966.8 |
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| CDS CCA 72 bp | GCACACTTGATTCTAACAGGTTCTCCCACCAAAACTTaGTACTTCTTGATATCAACAGACCAATCTGTGCAT | + |
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Preference number: 6 (lower is better) Translates to: AHLILTGSPTKT*YFLISTDQSVH Trigger: ATGCACAGATTGGTCTGTTGATATCAAGAAGTACCAAGTTTTGGTGGGAGAACCTGTTAGAATCAAGTGTGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000078875.8 ENSMUST00000113964.2 ENSMUST00000113966.8 |
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| CDS CAA 72 bp | ATTCTAACAGGTTCTCCCACCAAAACTTGGTACTTCTaGATATCAACAGACCAATCTGTGCATCCATCAGCA | + |
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Preference number: 6 (lower is better) Translates to: ILTGSPTKTWYF*ISTDQSVHPSA Trigger: TGCTGATGGATGCACAGATTGGTCTGTTGATATCAAGAAGTACCAAGTTTTGGTGGGAGAACCTGTTAGAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000078875.8 ENSMUST00000113964.2 ENSMUST00000113966.8 |
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| CDS CAA 72 bp | TGCACACTTGATTCTAACAGGTTCTCCCACCAAAACTaGGTACTTCTTGATATCAACAGACCAATCTGTGCA | + |
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Preference number: 6 (lower is better) Translates to: CTLDSNRFSHQN*VLLDINRPICA Trigger: TGCACAGATTGGTCTGTTGATATCAAGAAGTACCAAGTTTTGGTGGGAGAACCTGTTAGAATCAAGTGTGCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000078875.8 ENSMUST00000113964.2 ENSMUST00000113966.8 |
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| CDS CAA 90 bp | ATAAAAGAGTGCACACTTGATTCTAACAGGTTCTCCCACCAAAACTaGGTACTTCTTGATATCAACAGACCAATCTGTGCATCCATCAGC | + |
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Preference number: 6 (lower is better) Translates to: IKECTLDSNRFSHQN*VLLDINRPICASIS Trigger: GCTGATGGATGCACAGATTGGTCTGTTGATATCAAGAAGTACCAAGTTTTGGTGGGAGAACCTGTTAGAATCAAGTGTGCACTCTTTTAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000078875.8 ENSMUST00000113964.2 ENSMUST00000113966.8 |
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| CDS CAA 90 bp | TCGAACTACATAATTTGGGGTCATGACAATAATCAGCCGCTTACTTaGATCTACGCATCTAGCCACATCTTCAATGTATGTTCCAGTTGG | + |
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Preference number: 6 (lower is better) Translates to: SNYIIWGHDNNQPLT*IYASSHIFNVCSSW Trigger: CCAACTGGAACATACATTGAAGATGTGGCTAGATGCGTAGATCAAAGTAAGCGGCTGATTATTGTCATGACCCCAAATTATGTAGTTCGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000078875.8 ENSMUST00000113966.8 |
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| CDS CAA 90 bp | GGCATTTCGTACTGTAAACGTTTCCAGAACTTCGAGTTCAACTTGTaGCATTTTGGTCCATGCCATTTAATAACCGTCAGAAGCTTGATG | + |
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Preference number: 6 (lower is better) Translates to: GISYCKRFQNFEFNL*HFGPCHLITVRSLM Trigger: CATCAAGCTTCTGACGGTTATTAAATGGCATGGACCAAAATGCAACAAGTTGAACTCGAAGTTCTGGAAACGTTTACAGTACGAAATGCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000078875.8 ENSMUST00000113966.8 |
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| CDS CAA 90 bp | CTTTTGTTCTACATTCCTTGTACCAAAGGATTTCAGGTTCCCTGGTaGGTAATAAAAAGTCCTCTATGTCTCGGCATGAAATTTCCTTGC | + |
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Preference number: 6 (lower is better) Translates to: LLFYIPCTKGFQVPW*VIKSPLCLGMKFPC Trigger: GCAAGGAAATTTCATGCCGAGACATAGAGGACTTTTTATTACCAACCAGGGAACCTGAAATCCTTTGGTACAAGGAATGTAGAACAAAAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000078875.8 ENSMUST00000113964.2 ENSMUST00000113966.8 |
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| CDS CAA 90 bp | AAAGGCATTTCGTACTGTAAACGTTTCCAGAACTTCGAGTTCAACTaGTTGCATTTTGGTCCATGCCATTTAATAACCGTCAGAAGCTTG | + |
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Preference number: 6 (lower is better) Translates to: KGISYCKRFQNFEFN*LHFGPCHLITVRSL Trigger: CAAGCTTCTGACGGTTATTAAATGGCATGGACCAAAATGCAACAAGTTGAACTCGAAGTTCTGGAAACGTTTACAGTACGAAATGCCTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000078875.8 ENSMUST00000113966.8 |
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| CDS TCA 72 bp | TCAGCAGAACCTCTTTTAGTCACAACCTTCAGACTCTaGGTGAAAGTAGCATATAAGAGAATCAAATGTGGG | + |
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Preference number: 6 (lower is better) Translates to: SAEPLLVTTFRL*VKVAYKRIKCG Trigger: CCCACATTTGATTCTCTTATATGCTACTTTCACTCAGAGTCTGAAGGTTGTGACTAAAAGAGGTTCTGCTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000078875.8 ENSMUST00000113964.2 ENSMUST00000113966.8 |
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| CDS CAA 72 bp | TACATTCCTTGTACCAAAGGATTTCAGGTTCCCTGGTaGGTAATAAAAAGTCCTCTATGTCTCGGCATGAAA | + |
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Preference number: 6 (lower is better) Translates to: YIPCTKGFQVPW*VIKSPLCLGMK Trigger: TTTCATGCCGAGACATAGAGGACTTTTTATTACCAACCAGGGAACCTGAAATCCTTTGGTACAAGGAATGTA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000078875.8 ENSMUST00000113964.2 ENSMUST00000113966.8 |
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| CDS CAA 72 bp | ATAATTTGGGGTCATGACAATAATCAGCCGCTTACTTaGATCTACGCATCTAGCCACATCTTCAATGTATGT | + |
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Preference number: 6 (lower is better) Translates to: IIWGHDNNQPLT*IYASSHIFNVC Trigger: ACATACATTGAAGATGTGGCTAGATGCGTAGATCAAAGTAAGCGGCTGATTATTGTCATGACCCCAAATTAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000078875.8 ENSMUST00000113966.8 |
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| CDS CAA 72 bp | TACTGTAAACGTTTCCAGAACTTCGAGTTCAACTTGTaGCATTTTGGTCCATGCCATTTAATAACCGTCAGA | + |
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Preference number: 6 (lower is better) Translates to: YCKRFQNFEFNL*HFGPCHLITVR Trigger: TCTGACGGTTATTAAATGGCATGGACCAAAATGCAACAAGTTGAACTCGAAGTTCTGGAAACGTTTACAGTA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000078875.8 ENSMUST00000113966.8 |
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