Pregenerated sensors for IL1RAP (Mus musculus)
Ensembl gene IDs: ENSMUSG00000022514Ensembl transcript IDs: ENSMUST00000023156.13, ENSMUST00000096129.9, ENSMUST00000166294.9, ENSMUST00000173136.2, ENSMUST00000174171.2, ENSMUST00000174202.8
Found 466 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GAGACCCTGCTTGTCATTGCTAGACCACCTGGGACTCTTCTTCACTaGCATGGCCACCTGCAACTGCTTCCAGAACCTGCCCTGAGGATA | + |
|
Preference number: 1 (lower is better) Translates to: ETLLVIARPPGTLLH*HGHLQLLPEPALRI Trigger: TATCCTCAGGGCAGGTTCTGGAAGCAGTTGCAGGTGGCCATGCCAGTGAAGAAGAGTCCCAGGTGGTCTAGCAATGACAAGCAGGGTCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174171.2 |
||
| 3UTR CCA 90 bp | TGCTCAAGGGTGCCTGATAGGTCCTGGCTTGAAGGCCATGTGCCATaGACCTTTGGTTGGCATGTGACTGACTGCAGAAAGACCCTACTT | + |
|
Preference number: 1 (lower is better) Translates to: CSRVPDRSWLEGHVP*TFGWHVTDCRKTLL Trigger: AAGTAGGGTCTTTCTGCAGTCAGTCACATGCCAACCAAAGGTCCATGGCACATGGCCTTCAAGCCAGGACCTATCAGGCACCCTTGAGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000096129.9 ENSMUST00000166294.9 |
||
| 3UTR TCA 90 bp | CTCCAACCGTGCAGAAACTACAGAGAACAGAGGGAACAGCTGTGGTaGCAAGTCTGGCCCTTGTGTTCCCATAAGTCCATGCGGAAGGTA | + |
|
Preference number: 1 (lower is better) Translates to: LQPCRNYREQREQLW*QVWPLCSHKSMRKV Trigger: TACCTTCCGCATGGACTTATGGGAACACAAGGGCCAGACTTGTCACCACAGCTGTTCCCTCTGTTCTCTGTAGTTTCTGCACGGTTGGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023156.13 |
||
| 3UTR TCA 90 bp | AAAGATTTGGTCCCTGGGGACACAAATGTGCTGGCGGTTTGCTGTTaGGCTCTGTCTACCAGAACCTGCTCCCTTTCAAGTCACTCCTTG | + |
|
Preference number: 1 (lower is better) Translates to: KDLVPGDTNVLAVCC*ALSTRTCSLSSHSL Trigger: CAAGGAGTGACTTGAAAGGGAGCAGGTTCTGGTAGACAGAGCTCAACAGCAAACCGCCAGCACATTTGTGTCCCCAGGGACCAAATCTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000096129.9 ENSMUST00000166294.9 |
||
| 3UTR CCA 90 bp | AGTTGCCACGCAGAAGCTGATTCAGTGGCAACAACCAAACAGAGGTaGGGAAACACTCATGTGTTCTTTAGTCATCTGCATGCTCAAGGG | + |
|
Preference number: 1 (lower is better) Translates to: SCHAEADSVATTKQR*GNTHVFFSHLHAQG Trigger: CCCTTGAGCATGCAGATGACTAAAGAACACATGAGTGTTTCCCCACCTCTGTTTGGTTGTTGCCACTGAATCAGCTTCTGCGTGGCAACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000096129.9 ENSMUST00000166294.9 |
||
| 3UTR CCA 90 bp | ACTTGTCTGAAGCTGCTCTTTGTCCTTGGTGTTCAATCAAGCCTATaGGTGTTAGACTTGCATCTGCTCCTTTGTTCCCCCTTTCTCTCA | + |
|
Preference number: 1 (lower is better) Translates to: TCLKLLFVLGVQSSL*VLDLHLLLCSPFLS Trigger: TGAGAGAAAGGGGGAACAAAGGAGCAGATGCAAGTCTAACACCCATAGGCTTGATTGAACACCAAGGACAAAGAGCAGCTTCAGACAAGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000096129.9 ENSMUST00000166294.9 |
||
| 3UTR GCA 90 bp | TTTTCAGCTTGGAGAAGGAATATACATTTCCCATATGTTCTTACTTaGGTTGTCCTCAGGTCACAGTTGCCTGAGGCACTTGGACCCCTA | + |
|
Preference number: 1 (lower is better) Translates to: FSAWRRNIHFPYVLT*VVLRSQLPEALGPL Trigger: TAGGGGTCCAAGTGCCTCAGGCAACTGTGACCTGAGGACAACGCAAGTAAGAACATATGGGAAATGTATATTCCTTCTCCAAGCTGAAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000096129.9 |
||
| 3UTR TCA 90 bp | TTTACTGGCCCACATCACAAGGAGACACCAGTTCCTAGCTACCTTTaGATCCCTTGGCAAGATCAGACTCTAAGCAACTTTTACATACTG | + |
|
Preference number: 1 (lower is better) Translates to: FTGPHHKETPVPSYL*IPWQDQTLSNFYIL Trigger: CAGTATGTAAAAGTTGCTTAGAGTCTGATCTTGCCAAGGGATTCAAAGGTAGCTAGGAACTGGTGTCTCCTTGTGATGTGGGCCAGTAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000096129.9 ENSMUST00000166294.9 |
||
| 3UTR TCA 90 bp | TCAGCTGTTTCCTGGGCTGGAGGATTCATCAGACCAACACTATTATaGAGGCCAGATGTTTTCAGCTTGGAGAAGGAATATACATTTCCC | + |
|
Preference number: 1 (lower is better) Translates to: SAVSWAGGFIRPTLL*RPDVFSLEKEYTFP Trigger: GGGAAATGTATATTCCTTCTCCAAGCTGAAAACATCTGGCCTTCATAATAGTGTTGGTCTGATGAATCCTCCAGCCCAGGAAACAGCTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096129.9 |
||
| 3UTR CCA 90 bp | TTGCATCTGCTCCTTTGTTCCCCCTTTCTCTCACCTTCTGGCCCTTaGAGGAATTTGAACTCAACATCTAATTTCAGAATTGTGAAGAAC | + |
|
Preference number: 1 (lower is better) Translates to: LHLLLCSPFLSPSGP*RNLNSTSNFRIVKN Trigger: GTTCTTCACAATTCTGAAATTAGATGTTGAGTTCAAATTCCTCCAAGGGCCAGAAGGTGAGAGAAAGGGGGAACAAAGGAGCAGATGCAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000096129.9 ENSMUST00000166294.9 |
||
| 3UTR TCA 90 bp | ATGCTCTGCTGTGTTCTAAATGCCTTCAATTCTTCTGAGGCTCCCTaGATTTCGAAAATGAAACGGCTCATTTGCAGACAGTTTAACCAT | + |
|
Preference number: 1 (lower is better) Translates to: MLCCVLNAFNSSEAP*ISKMKRLICRQFNH Trigger: ATGGTTAAACTGTCTGCAAATGAGCCGTTTCATTTTCGAAATTCAGGGAGCCTCAGAAGAATTGAAGGCATTTAGAACACAGCAGAGCAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173136.2 |
||
| 3UTR CCA 90 bp | CTATTCGATTGTTTGCTTATGCTGAGACAATTCCAAGGGCTAAACTaGCCCTTCATTTTCAGCTATTGCCTGCAAACACTGTTAAAAGGA | + |
|
Preference number: 1 (lower is better) Translates to: LFDCLLMLRQFQGLN*PFIFSYCLQTLLKG Trigger: TCCTTTTAACAGTGTTTGCAGGCAATAGCTGAAAATGAAGGGCCAGTTTAGCCCTTGGAATTGTCTCAGCATAAGCAAACAATCGAATAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000173136.2 |
||
| 3UTR GCA 90 bp | AGGATTTTTCATTTAACTGACTCAGTGTTTTGTGTCCGATGTGGGTaGAGAAATTCTCTCCTTTATTTCCTATTCACCACTGTGTTACCG | + |
|
Preference number: 1 (lower is better) Translates to: RIFHLTDSVFCVRCG*RNSLLYFLFTTVLP Trigger: CGGTAACACAGTGGTGAATAGGAAATAAAGGAGAGAATTTCTGCACCCACATCGGACACAAAACACTGAGTCAGTTAAATGAAAAATCCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000174202.8 |
||
| 3UTR CCA 90 bp | CTCCTGTCAGCAGGTAAAGTATCTTTAAACAGAGTTTTGAGTCACTaGGCAAAGCAGTTCCATAGAGGTGAGATTTTTACGAAGAGATTA | + |
|
Preference number: 1 (lower is better) Translates to: LLSAGKVSLNRVLSH*AKQFHRGEIFTKRL Trigger: TAATCTCTTCGTAAAAATCTCACCTCTATGGAACTGCTTTGCCCAGTGACTCAAAACTCTGTTTAAAGATACTTTACCTGCTGACAGGAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023156.13 |
||
| 3UTR GCA 90 bp | TTAAATCCCATGTGGCTGTATACATATACACTCTACATAGCATGCTaGTTTGTTAACCTGGGTGCAGAAGTTCTCATTATCATAAATACA | + |
|
Preference number: 1 (lower is better) Translates to: LNPMWLYTYTLYIAC*FVNLGAEVLIIINT Trigger: TGTATTTATGATAATGAGAACTTCTGCACCCAGGTTAACAAAGCAGCATGCTATGTAGAGTGTATATGTATACAGCCACATGGGATTTAA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023156.13 |
||
| 3UTR CCA 90 bp | ATCTCTGGGACTCATCTAAGATACAAAAGAGAATTAAATCCCATGTaGCTGTATACATATACACTCTACATAGCATGCTGCTTTGTTAAC | + |
|
Preference number: 1 (lower is better) Translates to: ISGTHLRYKRELNPM*LYTYTLYIACCFVN Trigger: GTTAACAAAGCAGCATGCTATGTAGAGTGTATATGTATACAGCCACATGGGATTTAATTCTCTTTTGTATCTTAGATGAGTCCCAGAGAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023156.13 |
||
| 3UTR CCA 90 bp | CGAATATTTAGAGTGAAACTATGTGAACTATTCTTAGAAGAGTTTTaGATGGTGAGCAGTTTCCTCAAGACACCAAGAAACAAAGTCCTT | + |
|
Preference number: 1 (lower is better) Translates to: RIFRVKLCELFLEEF*MVSSFLKTPRNKVL Trigger: AAGGACTTTGTTTCTTGGTGTCTTGAGGAAACTGCTCACCATCCAAAACTCTTCTAAGAATAGTTCACATAGTTTCACTCTAAATATTCG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173136.2 |
||
| 3UTR-3UTR TCA 90 bp | AGTCATCTGCATGCTCAAGGGTGCCTGATAGGTCCTGGCTTGAAGGCCATGTGCGATAGACACATCCTGTaGGTGTCAAAGCCCTGGTCT | + |
|
Preference number: 2 (lower is better) Translates to: SHLHAQGCLIGPGLKAMCDRHIL*VSKPWS Trigger: AGACCAGGGCTTTGACACTCACAGGATGTGTCTATC...GCACATGGCCTTCAAGCCAGGACCTATCAGGCACCCTTGAGCATGCAGATGACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000096129.9 ENSMUST00000166294.9 |
||
| 3UTR-3UTR TCA 90 bp | ACCGTCTTAGCCCGCTTCAGCTCTTTCACCTTCATGTCCTTCACAGCTTTGTACTTTCTAGGCCAGCCTTaGGCTCCAGGAGGGCTTGTG | + |
|
Preference number: 2 (lower is better) Translates to: TVLARFSSFTFMSFTALYFLGQP*APGGLV Trigger: CACAAGCCCTCCTGGAGCTCAAGGCTGGCCTAGAAA...GTACAAAGCTGTGAAGGACATGAAGGTGAAAGAGCTGAAGCGGGCTAAGACGGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174171.2 |
||
| 3UTR CAA 90 bp | CCTATGGAAAGATTTGGTCCCTGGGGACACAAATGTGCTGGCGGTTaGCTGTTGAGCTCTGTCTACCAGAACCTGCTCCCTTTCAAGTCA | + |
|
Preference number: 2 (lower is better) Translates to: PMERFGPWGHKCAGG*LLSSVYQNLLPFKS Trigger: TGACTTGAAAGGGAGCAGGTTCTGGTAGACAGAGCTCAACAGCAAACCGCCAGCACATTTGTGTCCCCAGGGACCAAATCTTTCCATAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000096129.9 ENSMUST00000166294.9 |
||
| 3UTR-3UTR TCA 90 bp | AGTCATCTGCATGCTCAAGGGTGCCTGATAGGTCCTGGCTTGAAGGCCATGTGCGGTGCAAAAACTCAATaGGTGTCAAAGCCGAAGTAC | + |
|
Preference number: 2 (lower is better) Translates to: SHLHAQGCLIGPGLKAMCGAKTQ*VSKPKY Trigger: GTACTTCGGCTTTGACACTCATTGAGTTTTTGCACC...GCACATGGCCTTCAAGCCAGGACCTATCAGGCACCCTTGAGCATGCAGATGACT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000096129.9 ENSMUST00000166294.9 |
||
| 3UTR-3UTR CCA 90 bp | AGTCATCTGCATGCTCAAGGGTGCCTGATAGGTCCTGGCTTGAAGGCCATGTGCTCCTATGGAAAGATTTaGTCCCTGGGGACACAAATG | + |
|
Preference number: 2 (lower is better) Translates to: SHLHAQGCLIGPGLKAMCSYGKI*SLGTQM Trigger: CATTTGTGTCCCCAGGGACCAAATCTTTCCATAGGA...GCACATGGCCTTCAAGCCAGGACCTATCAGGCACCCTTGAGCATGCAGATGACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000096129.9 ENSMUST00000166294.9 |
||
| 3UTR CAA 90 bp | CTGCTCTTTGTCCTTGGTGTTCAATCAAGCCTATGGGTGTTAGACTaGCATCTGCTCCTTTGTTCCCCCTTTCTCTCACCTTCTGGCCCT | + |
|
Preference number: 2 (lower is better) Translates to: LLFVLGVQSSLWVLD*HLLLCSPFLSPSGP Trigger: AGGGCCAGAAGGTGAGAGAAAGGGGGAACAAAGGAGCAGATGCAAGTCTAACACCCATAGGCTTGATTGAACACCAAGGACAAAGAGCAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000096129.9 ENSMUST00000166294.9 |
||
| 3UTR CAA 90 bp | GTCTTAGCCCGCTTCAGCTCTTTCACCTTCATGTCCTTCACAGCTTaGTACTGCACTAAAATGACGTTGATGTTGCCCCGGGAGGCCATA | + |
|
Preference number: 2 (lower is better) Translates to: VLARFSSFTFMSFTA*YCTKMTLMLPREAI Trigger: TATGGCCTCCCGGGGCAACATCAACGTCATTTTAGTGCAGTACAAAGCTGTGAAGGACATGAAGGTGAAAGAGCTGAAGCGGGCTAAGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000174171.2 |
||
| 3UTR-3UTR GCA 90 bp | AGTCATCTGCATGCTCAAGGGTGCCTGATAGGTCCTGGCTTGAAGGCCATGTGCATAACTGGATACAGGTaGTTCAGGTCTTTTGTCTCC | + |
|
Preference number: 2 (lower is better) Translates to: SHLHAQGCLIGPGLKAMCITGYR*FRSFVS Trigger: GGAGACAAAAGACCTGAAGCACCTGTATCCAGTTAT...GCACATGGCCTTCAAGCCAGGACCTATCAGGCACCCTTGAGCATGCAGATGACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096129.9 |
||
| 3UTR-3UTR GCA 90 bp | TACTTGTCTGAAGCTGCTCTTTGTCCTTGGTGTTCAATCAAGCCTATGGGTGTTGGCCCGAGAAGAGTGTaGTTGCTCTTCCAAGGCCGT | + |
|
Preference number: 2 (lower is better) Translates to: YLSEAALCPWCSIKPMGVGPRRV*LLFQGR Trigger: ACGGCCTTGGAAGAGCAAGCACACTCTTCTCGGGCC...AACACCCATAGGCTTGATTGAACACCAAGGACAAAGAGCAGCTTCAGACAAGTA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000096129.9 ENSMUST00000166294.9 |
||
| 3UTR-3UTR TCA 90 bp | TGCCCTGAGAGCGCTTTTGCATTTTCTCACTCTCCATTAGCACCATTAAAGCTTGGGCCCTTCCTCCCATaGACCGCCTTGTTCTTTGTA | + |
|
Preference number: 2 (lower is better) Translates to: CPESAFAFSHSPLAPLKLGPFLP*TALFFV Trigger: TACAAAGAACAAGGCGGTTCATGGGAGGAAGGGCCC...AAGCTTTAATGGTGCTAATGGAGAGTGAGAAAATGCAAAAGCGCTCTCAGGGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023156.13 |
||
| 3UTR-3UTR TCA 90 bp | CCAATGACAAAAAGCATACTATTTACAGGGGGCAATGGGAAGCAGGGATTCCTACTGGCGGTTTGCTGTTaGGCTCTGTCTACCAGAACC | + |
|
Preference number: 2 (lower is better) Translates to: PMTKSILFTGGNGKQGFLLAVCC*ALSTRT Trigger: GGTTCTGGTAGACAGAGCTCAACAGCAAACCGCCAG...TAGGAATCCCTGCTTCCCATTGCCCCCTGTAAATAGTATGCTTTTTGTCATTGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000096129.9 ENSMUST00000166294.9 |
||
| 3UTR CAA 90 bp | TGGTGTTCAATCAAGCCTATGGGTGTTAGACTTGCATCTGCTCCTTaGTTCCCCCTTTCTCTCACCTTCTGGCCCTTGGAGGAATTTGAA | + |
|
Preference number: 2 (lower is better) Translates to: WCSIKPMGVRLASAP*FPLSLTFWPLEEFE Trigger: TTCAAATTCCTCCAAGGGCCAGAAGGTGAGAGAAAGGGGGAACAAAGGAGCAGATGCAAGTCTAACACCCATAGGCTTGATTGAACACCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000096129.9 ENSMUST00000166294.9 |
||
| 3UTR-3UTR TCA 90 bp | GTCTACCAGAACCTGCTCCCTTTCAAGTCACTCCTTGGGATAGACACATCCTGTGGTGCAAAAACTCAATaGGTGTCAAAGCCGAAGTAC | + |
|
Preference number: 2 (lower is better) Translates to: VYQNLLPFKSLLGIDTSCGAKTQ*VSKPKY Trigger: GTACTTCGGCTTTGACACTCATTGAGTTTTTGCACC...ACAGGATGTGTCTATCCCAAGGAGTGACTTGAAAGGGAGCAGGTTCTGGTAGAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000096129.9 ENSMUST00000166294.9 |
||
| 3UTR-3UTR TCA 90 bp | TTCACAGCTTTGTACTGCACTAAAATGACGTTGATGTTGCCCCGGGAGGCCATAGTCTGCTTTTCTGAATaGAGCTCAGGGTCTCATCTG | + |
|
Preference number: 2 (lower is better) Translates to: FTALYCTKMTLMLPREAIVCFSE*SSGSHL Trigger: CAGATGAGACCCTGAGCTTCATTCAGAAAAGCAGAC...TATGGCCTCCCGGGGCAACATCAACGTCATTTTAGTGCAGTACAAAGCTGTGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000174171.2 |
||
| 3UTR-3UTR CCA 90 bp | TTGTTCCCCCTTTCTCTCACCTTCTGGCCCTTGGAGGAATTTGAACTCAACATCAAGCAGGGATTCCTATaGAAAGATTTGGTCCCTGGG | + |
|
Preference number: 2 (lower is better) Translates to: LFPLSLTFWPLEEFELNIKQGFL*KDLVPG Trigger: CCCAGGGACCAAATCTTTCCATAGGAATCCCTGCTT...GATGTTGAGTTCAAATTCCTCCAAGGGCCAGAAGGTGAGAGAAAGGGGGAACAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000096129.9 ENSMUST00000166294.9 |
||
| 3UTR CAA 90 bp | CTCCTTTGTTCCCCCTTTCTCTCACCTTCTGGCCCTTGGAGGAATTaGAACTCAACATCTAATTTCAGAATTGTGAAGAACGGCTGCAGG | + |
|
Preference number: 2 (lower is better) Translates to: LLCSPFLSPSGPWRN*NSTSNFRIVKNGCR Trigger: CCTGCAGCCGTTCTTCACAATTCTGAAATTAGATGTTGAGTTCAAATTCCTCCAAGGGCCAGAAGGTGAGAGAAAGGGGGAACAAAGGAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000096129.9 ENSMUST00000166294.9 |
||
| 3UTR CAA 90 bp | CAGCTTGGAGAAGGAATATACATTTCCCATATGTTCTTACTTGCGTaGTCCTCAGGTCACAGTTGCCTGAGGCACTTGGACCCCTATTTC | + |
|
Preference number: 2 (lower is better) Translates to: QLGEGIYISHMFLLA*SSGHSCLRHLDPYF Trigger: GAAATAGGGGTCCAAGTGCCTCAGGCAACTGTGACCTGAGGACAACGCAAGTAAGAACATATGGGAAATGTATATTCCTTCTCCAAGCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096129.9 |
||
| 3UTR-3UTR TCA 90 bp | CTCTCACCTTCTGGCCCTTGGAGGAATTTGAACTCAACATCTAATTTCAGAATTCTGGCGGTTTGCTGTTaGGCTCTGTCTACCAGAACC | + |
|
Preference number: 2 (lower is better) Translates to: LSPSGPWRNLNSTSNFRILAVCC*ALSTRT Trigger: GGTTCTGGTAGACAGAGCTCAACAGCAAACCGCCAG...AATTCTGAAATTAGATGTTGAGTTCAAATTCCTCCAAGGGCCAGAAGGTGAGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000096129.9 ENSMUST00000166294.9 |
||
| 3UTR CAA 90 bp | GCTGAGACAATTCCAAGGGCTAAACTGGCCCTTCATTTTCAGCTATaGCCTGCAAACACTGTTAAAAGGATGATTTGTGGTCCTCCTTGG | + |
|
Preference number: 2 (lower is better) Translates to: AETIPRAKLALHFQL*PANTVKRMICGPPW Trigger: CCAAGGAGGACCACAAATCATCCTTTTAACAGTGTTTGCAGGCAATAGCTGAAAATGAAGGGCCAGTTTAGCCCTTGGAATTGTCTCAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000173136.2 |
||
| 3UTR-3UTR TCA 90 bp | TACTTGTCTGAAGCTGCTCTTTGTCCTTGGTGTTCAATCAAGCCTATGGGTGTTGCAACTTTTACATACTaGCCTTCTAGGGCCCGAGAA | + |
|
Preference number: 2 (lower is better) Translates to: YLSEAALCPWCSIKPMGVATFTY*PSRARE Trigger: TTCTCGGGCCCTAGAAGGTCAGTATGTAAAAGTTGC...AACACCCATAGGCTTGATTGAACACCAAGGACAAAGAGCAGCTTCAGACAAGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000096129.9 ENSMUST00000166294.9 |
||
| 3UTR-3UTR TCA 90 bp | GACAAAAAGCATACTATTTACAGGGGGCAATGGGAAGCAGGGATTCCTATGGAAGTTCCTAGCTACCTTTaGATCCCTTGGCAAGATCAG | + |
|
Preference number: 2 (lower is better) Translates to: DKKHTIYRGQWEAGIPMEVPSYL*IPWQDQ Trigger: CTGATCTTGCCAAGGGATTCAAAGGTAGCTAGGAAC...TTCCATAGGAATCCCTGCTTCCCATTGCCCCCTGTAAATAGTATGCTTTTTGTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000096129.9 ENSMUST00000166294.9 |
||
| 3UTR-3UTR TCA 90 bp | CCAATGACAAAAAGCATACTATTTACAGGGGGCAATGGGAAGCAGGGATTCCTAGTTCCTAGCTACCTTTaGATCCCTTGGCAAGATCAG | + |
|
Preference number: 2 (lower is better) Translates to: PMTKSILFTGGNGKQGFLVPSYL*IPWQDQ Trigger: CTGATCTTGCCAAGGGATTCAAAGGTAGCTAGGAAC...TAGGAATCCCTGCTTCCCATTGCCCCCTGTAAATAGTATGCTTTTTGTCATTGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000096129.9 ENSMUST00000166294.9 |
||
| 3UTR-3UTR TCA 90 bp | AAAGCATACTATTTACAGGGGGCAATGGGAAGCAGGGATTCCTATGGAAAGATTGATAGACACATCCTGTaGGTGTCAAAGCCCTGGTCT | + |
|
Preference number: 2 (lower is better) Translates to: KAYYLQGAMGSRDSYGKIDRHIL*VSKPWS Trigger: AGACCAGGGCTTTGACACTCACAGGATGTGTCTATC...AATCTTTCCATAGGAATCCCTGCTTCCCATTGCCCCCTGTAAATAGTATGCTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000096129.9 ENSMUST00000166294.9 |
||
| 3UTR-3UTR CCA 90 bp | TTGTTCCCCCTTTCTCTCACCTTCTGGCCCTTGGAGGAATTTGAACTCAACATCAAAGCCCTGGTCTTTTaGGTGCAAAAACTCAATGAG | + |
|
Preference number: 2 (lower is better) Translates to: LFPLSLTFWPLEEFELNIKALVF*VQKLNE Trigger: CTCATTGAGTTTTTGCACCCAAAAGACCAGGGCTTT...GATGTTGAGTTCAAATTCCTCCAAGGGCCAGAAGGTGAGAGAAAGGGGGAACAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000096129.9 ENSMUST00000166294.9 |
||
| 3UTR-3UTR CCA 90 bp | GAGCTGAGTCATTTCTGCTGTGTATCACAGCTAGGTACATATTCCATCATAAGGCCATGGACCTTTGGTTaGCATGTGACTGACTGCAGA | + |
|
Preference number: 2 (lower is better) Translates to: ELSHFCCVSQLGTYSIIRPWTFG*HVTDCR Trigger: TCTGCAGTCAGTCACATGCCAACCAAAGGTCCATGG...CCTTATGATGGAATATGTACCTAGCTGTGATACACAGCAGAAATGACTCAGCTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096129.9 |
||
| 3UTR-3UTR CCA 90 bp | GACAAAAAGCATACTATTTACAGGGGGCAATGGGAAGCAGGGATTCCTATGGAAGTTAGAGGCAATAACTaGATACAGGTGCTTCAGGTC | + |
|
Preference number: 2 (lower is better) Translates to: DKKHTIYRGQWEAGIPMEVRGNN*IQVLQV Trigger: GACCTGAAGCACCTGTATCCAGTTATTGCCTCTAAC...TTCCATAGGAATCCCTGCTTCCCATTGCCCCCTGTAAATAGTATGCTTTTTGTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000096129.9 ENSMUST00000166294.9 |
||
| 3UTR-3UTR CCA 90 bp | CTGCAGAAAGACCCTACTTGTCTGAAGCTGCTCTTTGTCCTTGGTGTTCAATCAAAAGCCCTGGTCTTTTaGGTGCAAAAACTCAATGAG | + |
|
Preference number: 2 (lower is better) Translates to: LQKDPTCLKLLFVLGVQSKALVF*VQKLNE Trigger: CTCATTGAGTTTTTGCACCCAAAAGACCAGGGCTTT...TGATTGAACACCAAGGACAAAGAGCAGCTTCAGACAAGTAGGGTCTTTCTGCAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000096129.9 ENSMUST00000166294.9 |
||
| 3UTR-3UTR CCA 90 bp | CAGAAAGAGAGAAAACATAAGGAGAGTAGTCACAGACTTCATAACACCCACATGGTGGTCCTCCTTGGCTaGAGAAAATCAGAGCCTTCT | + |
|
Preference number: 2 (lower is better) Translates to: QKERKHKESSHRLHNTHMVVLLG*RKSEPS Trigger: AGAAGGCTCTGATTTTCTCCAGCCAAGGAGGACCAC...CATGTGGGTGTTATGAAGTCTGTGACTACTCTCCTTATGTTTTCTCTCTTTCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000173136.2 |
||
| 3UTR-3UTR CCA 90 bp | TTGGATGGTGAGCAGTTTCCTCAAGACACCAAGAAACAAAGTCCTTCTTTGTTCATTTGTGGTCCTCCTTaGCTGGAGAAAATCAGAGCC | + |
|
Preference number: 2 (lower is better) Translates to: LDGEQFPQDTKKQSPSLFICGPP*LEKIRA Trigger: GGCTCTGATTTTCTCCAGCCAAGGAGGACCACAAAT...GAACAAAGAAGGACTTTGTTTCTTGGTGTCTTGAGGAAACTGCTCACCATCCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173136.2 |
||
| 3UTR-3UTR TCA 90 bp | CAGAAAGAGAGAAAACATAAGGAGAGTAGTCACAGACTTCATAACACCCACATGTGTGGCGTTTCATCTTaGTATCTTGGCACACTGAGG | + |
|
Preference number: 2 (lower is better) Translates to: QKERKHKESSHRLHNTHMCGVSS*YLGTLR Trigger: CCTCAGTGTGCCAAGATATCAAGATGAAACGCCACA...CATGTGGGTGTTATGAAGTCTGTGACTACTCTCCTTATGTTTTCTCTCTTTCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173136.2 |
||
| 3UTR-3UTR TCA 90 bp | AGTTCTCATTATCATAAATACAAGTGTGTGTCCCCCTCTCTCTGCTGTTCTATTTTAGATGATCACTGTTaGGCAGTGGCAATGGGAGGT | + |
|
Preference number: 2 (lower is better) Translates to: SSHYHKYKCVSPSLCCSILDDHC*AVAMGG Trigger: ACCTCCCATTGCCACTGCTCAACAGTGATCATCTAA...AATAGAACAGCAGAGAGAGGGGGACACACACTTGTATTTATGATAATGAGAACT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023156.13 |
||
| 3UTR-3UTR TCA 90 bp | TATGTTTTGAAACTTGTGAAAGAAATTGCACAAGTTGCCACGCAGAAGCTGATTTGGTTGGCATGTGACTaGCTGCAGAAAGACCCTACT | + |
|
Preference number: 2 (lower is better) Translates to: YVLKLVKEIAQVATQKLIWLACD*LQKDPT Trigger: AGTAGGGTCTTTCTGCAGTCAGTCACATGCCAACCA...AATCAGCTTCTGCGTGGCAACTTGTGCAATTTCTTTCACAAGTTTCAAAACATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000096129.9 ENSMUST00000166294.9 |
||
| 3UTR-3UTR TCA 90 bp | CAGATAAATGGATCAATGATGCTTCCTAATGACCATGTTACATGCTCTGCTGTGTCTTCTGAGGCTCCCTaGATTTCGAAAATGAAACGG | + |
|
Preference number: 2 (lower is better) Translates to: QINGSMMLPNDHVTCSAVSSEAP*ISKMKR Trigger: CCGTTTCATTTTCGAAATTCAGGGAGCCTCAGAAGA...CACAGCAGAGCATGTAACATGGTCATTAGGAAGCATCATTGATCCATTTATCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173136.2 |
||
| 3UTR-3UTR GCA 90 bp | GGTAAGAACTTTGACAACTATATACAGAGAGCCAGGAATTCACAAATGGAACAGGAACAGAGGTGGGGGTaGATCAGACACATCTTTACT | + |
|
Preference number: 2 (lower is better) Translates to: GKNFDNYIQRARNSQMEQEQRWG*IRHIFT Trigger: AGTAAAGATGTGTCTGATGCACCCCCACCTCTGTTC...CTGTTCCATTTGTGAATTCCTGGCTCTCTGTATATAGTTGTCAAAGTTCTTACC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023156.13 |
||
| 3UTR-3UTR GCA 90 bp | AGAGAGTTAGGCTGCATGGAAGCTAGAGTTTTATCAGACTATGATGTGAGAGCATGTGTCCGATGTGGGTaGAGAAATTCTCTCCTTTAT | + |
|
Preference number: 2 (lower is better) Translates to: RELGCMEARVLSDYDVRACVRCG*RNSLLY Trigger: ATAAAGGAGAGAATTTCTGCACCCACATCGGACACA...TGCTCTCACATCATAGTCTGATAAAACTCTAGCTTCCATGCAGCCTAACTCTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174202.8 |
||
| 3UTR-3UTR CCA 90 bp | GTTTTGAAACTTGTGAAAGAAATTGCACAAGTTGCCACGCAGAAGCTGATTCAGGTTAGAGGCAATAACTaGATACAGGTGCTTCAGGTC | + |
|
Preference number: 2 (lower is better) Translates to: VLKLVKEIAQVATQKLIQVRGNN*IQVLQV Trigger: GACCTGAAGCACCTGTATCCAGTTATTGCCTCTAAC...CTGAATCAGCTTCTGCGTGGCAACTTGTGCAATTTCTTTCACAAGTTTCAAAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000096129.9 ENSMUST00000166294.9 |
||
| 3UTR-3UTR CCA 90 bp | AAATTGGGACACAAACTTACCAGGATCAAGGAAGAGCTGGTTAAAGAAAATGGCTCACCTTCTGGCCCTTaGAGGAATTTGAACTCAACA | + |
|
Preference number: 2 (lower is better) Translates to: KLGHKLTRIKEELVKENGSPSGP*RNLNST Trigger: TGTTGAGTTCAAATTCCTCCAAGGGCCAGAAGGTGA...GCCATTTTCTTTAACCAGCTCTTCCTTGATCCTGGTAAGTTTGTGTCCCAATTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096129.9 |
||
| 3UTR-3UTR CCA 90 bp | GTTTTGAAACTTGTGAAAGAAATTGCACAAGTTGCCACGCAGAAGCTGATTCAGTCACCTTCTGGCCCTTaGAGGAATTTGAACTCAACA | + |
|
Preference number: 2 (lower is better) Translates to: VLKLVKEIAQVATQKLIQSPSGP*RNLNST Trigger: TGTTGAGTTCAAATTCCTCCAAGGGCCAGAAGGTGA...CTGAATCAGCTTCTGCGTGGCAACTTGTGCAATTTCTTTCACAAGTTTCAAAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000096129.9 ENSMUST00000166294.9 |
||
| 3UTR-3UTR CCA 90 bp | AAATTGGGACACAAACTTACCAGGATCAAGGAAGAGCTGGTTAAAGAAAATGGCCTTTCTCTCACCTTCTaGCCCTTGGAGGAATTTGAA | + |
|
Preference number: 2 (lower is better) Translates to: KLGHKLTRIKEELVKENGLSLTF*PLEEFE Trigger: TTCAAATTCCTCCAAGGGCCAGAAGGTGAGAGAAAG...GCCATTTTCTTTAACCAGCTCTTCCTTGATCCTGGTAAGTTTGTGTCCCAATTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096129.9 |
||
| 3UTR-3UTR CCA 90 bp | TTGGATGGTGAGCAGTTTCCTCAAGACACCAAGAAACAAAGTCCTTCTTTGTTCTTCCAAGGGCTAAACTaGCCCTTCATTTTCAGCTAT | + |
|
Preference number: 2 (lower is better) Translates to: LDGEQFPQDTKKQSPSLFFQGLN*PFIFSY Trigger: ATAGCTGAAAATGAAGGGCCAGTTTAGCCCTTGGAA...GAACAAAGAAGGACTTTGTTTCTTGGTGTCTTGAGGAAACTGCTCACCATCCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173136.2 |
||
| 3UTR-3UTR TCA 90 bp | TATGTTTTGAAACTTGTGAAAGAAATTGCACAAGTTGCCACGCAGAAGCTGATTAAGACCCTACTTGTCTaGAGCTGCTCTTTGTCCTTG | + |
|
Preference number: 2 (lower is better) Translates to: YVLKLVKEIAQVATQKLIKTLLV*SCSLSL Trigger: CAAGGACAAAGAGCAGCTTCAGACAAGTAGGGTCTT...AATCAGCTTCTGCGTGGCAACTTGTGCAATTTCTTTCACAAGTTTCAAAACATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000096129.9 ENSMUST00000166294.9 |
||
| 3UTR-3UTR GCA 90 bp | AGTTCTCATTATCATAAATACAAGTGTGTGTCCCCCTCTCTCTGCTGTTCTATTTTCCCATGTGAAAAATaGCCTGAGAGCGCTTTTGCA | + |
|
Preference number: 2 (lower is better) Translates to: SSHYHKYKCVSPSLCCSIFPCEK*PESAFA Trigger: TGCAAAAGCGCTCTCAGGGCATTTTTCACATGGGAA...AATAGAACAGCAGAGAGAGGGGGACACACACTTGTATTTATGATAATGAGAACT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000023156.13 |
||
| 3UTR-3UTR GCA 90 bp | ATTATCATAAATACAAGTGTGTGTCCCCCTCTCTCTGCTGTTCTATTTGAAGCAAACAAGAGATTCCCCTaGAACCCAGATCAACTGTTG | + |
|
Preference number: 2 (lower is better) Translates to: IIINTSVCPPLSAVLFEANKRFP*NPDQLL Trigger: CAACAGTTGATCTGGGTTGCAGGGGAATCTCTTGTT...TGCTTCAAATAGAACAGCAGAGAGAGGGGGACACACACTTGTATTTATGATAAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023156.13 |
||
| 3UTR-3UTR GCA 90 bp | GACCAACACTATTATGAAGGCCAGATGTTTTCAGCTTGGAGAAGGAATATACATATTGTGAAGAACGGCTaGAGGCACCAAAATCTACCT | + |
|
Preference number: 2 (lower is better) Translates to: DQHYYEGQMFSAWRRNIHIVKNG*RHQNLP Trigger: AGGTAGATTTTGGTGCCTGCAGCCGTTCTTCACAAT...ATGTATATTCCTTCTCCAAGCTGAAAACATCTGGCCTTCATAATAGTGTTGGTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000096129.9 |
||
| 3UTR-3UTR GCA 90 bp | GATGGTGAGCAGTTTCCTCAAGACACCAAGAAACAAAGTCCTTCTTTGTTCAACATGAAACGGCTCATTTaGAGACAGTTTAACCATCAC | + |
|
Preference number: 2 (lower is better) Translates to: DGEQFPQDTKKQSPSLFNMKRLI*RQFNHH Trigger: GTGATGGTTAAACTGTCTGCAAATGAGCCGTTTCAT...GTTGAACAAAGAAGGACTTTGTTTCTTGGTGTCTTGAGGAAACTGCTCACCATC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173136.2 |
||
| 3UTR-3UTR GCA 90 bp | AAGACACCAAGAAACAAAGTCCTTCTTTGTTCAACACTACAGCCTGTTCTCATGCCATGTTACATGCTCTaGTGTGTTCTAAATGCCTTC | + |
|
Preference number: 2 (lower is better) Translates to: KTPRNKVLLCSTLQPVLMPCYML*CVLNAF Trigger: GAAGGCATTTAGAACACAGCAGAGCATGTAACATGG...CATGAGAACAGGCTGTAGTGTTGAACAAAGAAGGACTTTGTTTCTTGGTGTCTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173136.2 |
||
| 3UTR-3UTR CCA 90 bp | GCAATTCCCTGTTTAAGTCCTCAGATAAATGGATCAATGATGCTTCCTAATGACGTTAGAGGCAATAACTaGATACAGGTGCTTCAGGTC | + |
|
Preference number: 2 (lower is better) Translates to: AIPCLSPQINGSMMLPNDVRGNN*IQVLQV Trigger: GACCTGAAGCACCTGTATCCAGTTATTGCCTCTAAC...GTCATTAGGAAGCATCATTGATCCATTTATCTGAGGACTTAAACAGGGAATTGC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173136.2 |
||
| 3UTR-3UTR CCA 90 bp | TATGTTTTGAAACTTGTGAAAGAAATTGCACAAGTTGCCACGCAGAAGCTGATTATTTACAGGGGGCAATaGGAAGCAGGGATTCCTATG | + |
|
Preference number: 2 (lower is better) Translates to: YVLKLVKEIAQVATQKLIIYRGQ*EAGIPM Trigger: CATAGGAATCCCTGCTTCCCATTGCCCCCTGTAAAT...AATCAGCTTCTGCGTGGCAACTTGTGCAATTTCTTTCACAAGTTTCAAAACATA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000096129.9 ENSMUST00000166294.9 |
||
| 3UTR-3UTR CCA 90 bp | CAGAAAGAGAGAAAACATAAGGAGAGTAGTCACAGACTTCATAACACCCACATGAATACAGACAATGGTTaGAACACTCCCACCAAGTTC | + |
|
Preference number: 2 (lower is better) Translates to: QKERKHKESSHRLHNTHMNTDNG*NTPTKF Trigger: GAACTTGGTGGGAGTGTTCCAACCATTGTCTGTATT...CATGTGGGTGTTATGAAGTCTGTGACTACTCTCCTTATGTTTTCTCTCTTTCTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173136.2 |
||
| 3UTR-3UTR CCA 90 bp | CAGATAAATGGATCAATGATGCTTCCTAATGACCATGTTACATGCTCTGCTGTGGCTACACATTTCACATaGCAAGGACACAAAACTGCA | + |
|
Preference number: 2 (lower is better) Translates to: QINGSMMLPNDHVTCSAVATHFT*QGHKTA Trigger: TGCAGTTTTGTGTCCTTGCCATGTGAAATGTGTAGC...CACAGCAGAGCATGTAACATGGTCATTAGGAAGCATCATTGATCCATTTATCTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173136.2 |
||
| 3UTR-3UTR TCA 90 bp | ACAAGTACCGACCTGTCTATCTGTAGACAGATGAGAAATTACTATGATAAAACAGGAACAGCTGCAGTTTaGCTGTTAGTCTTGCTTAGG | + |
|
Preference number: 2 (lower is better) Translates to: TSTDLSICRQMRNYYDKTGTAAV*LLVLLR Trigger: CCTAAGCAAGACTAACAGTCAAACTGCAGCTGTTCC...TGTTTTATCATAGTAATTTCTCATCTGTCTACAGATAGACAGGTCGGTACTTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023156.13 |
||
| 3UTR-3UTR GCA 90 bp | AAGCTGCTCTTTGTCCTTGGTGTTCAATCAAGCCTATGGGTGTTAGACTTGCATATAAATGCCAGAAAATaGAAATTGAGGAGAGGACAT | + |
|
Preference number: 2 (lower is better) Translates to: KLLFVLGVQSSLWVLDLHINARK*KLRRGH Trigger: ATGTCCTCTCCTCAATTTGCATTTTCTGGCATTTAT...ATGCAAGTCTAACACCCATAGGCTTGATTGAACACCAAGGACAAAGAGCAGCTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000096129.9 ENSMUST00000166294.9 |
||
| 3UTR-3UTR CCA 90 bp | AGTTCTCATTATCATAAATACAAGTGTGTGTCCCCCTCTCTCTGCTGTTCTATTAGAGTTTTGAGTCACTaGGCAAAGCAGTTCCATAGA | + |
|
Preference number: 2 (lower is better) Translates to: SSHYHKYKCVSPSLCCSIRVLSH*AKQFHR Trigger: TCTATGGAACTGCTTTGCCCAGTGACTCAAAACTCT...AATAGAACAGCAGAGAGAGGGGGACACACACTTGTATTTATGATAATGAGAACT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023156.13 |
||
| 3UTR-3UTR TCA 90 bp | ACAAGTACCGACCTGTCTATCTGTAGACAGATGAGAAATTACTATGATAAAACACTCTTTTTCTGTCTATaGAGCCACAGCCTAGAAGGA | + |
|
Preference number: 2 (lower is better) Translates to: TSTDLSICRQMRNYYDKTLFFCL*SHSLEG Trigger: TCCTTCTAGGCTGTGGCTTCATAGACAGAAAAAGAG...TGTTTTATCATAGTAATTTCTCATCTGTCTACAGATAGACAGGTCGGTACTTGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023156.13 |
||
| 3UTR-3UTR TCA 90 bp | TTTATTTTGGTGCTTAGAATTAGGAAAATAGGGCTTGATTGTCCTCGGGATCTTGTCTCCTTCTTCATCTaGGCAATTCCCTGTTTAAGT | + |
|
Preference number: 2 (lower is better) Translates to: FILVLRIRKIGLDCPRDLVSFFI*AIPCLS Trigger: ACTTAAACAGGGAATTGCTCAGATGAAGAAGGAGAC...AAGATCCCGAGGACAATCAAGCCCTATTTTCCTAATTCTAAGCACCAAAATAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000173136.2 |
||
| 3UTR CAA 90 bp | TTCATAGATTATGAATACATTCTACCAACCACTCTATTCGATTGTTaGCTTATGCTGAGACAATTCCAAGGGCTAAACTGGCCCTTCATT | + |
|
Preference number: 2 (lower is better) Translates to: FIDYEYILPTTLFDC*LMLRQFQGLNWPFI Trigger: AATGAAGGGCCAGTTTAGCCCTTGGAATTGTCTCAGCATAAGCAAACAATCGAATAGAGTGGTTGGTAGAATGTATTCATAATCTATGAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173136.2 |
||
| 3UTR-3UTR GCA 90 bp | AAATTGGGACACAAACTTACCAGGATCAAGGAAGAGCTGGTTAAAGAAAATGGCATAAATGCCAGAAAATaGAAATTGAGGAGAGGACAT | + |
|
Preference number: 2 (lower is better) Translates to: KLGHKLTRIKEELVKENGINARK*KLRRGH Trigger: ATGTCCTCTCCTCAATTTGCATTTTCTGGCATTTAT...GCCATTTTCTTTAACCAGCTCTTCCTTGATCCTGGTAAGTTTGTGTCCCAATTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000096129.9 |
||
| 3UTR-3UTR GCA 90 bp | CAGATAAATGGATCAATGATGCTTCCTAATGACCATGTTACATGCTCTGCTGTGTGTAGAAGAAGACTATaGCATGTGTTCATAAAATCC | + |
|
Preference number: 2 (lower is better) Translates to: QINGSMMLPNDHVTCSAVCRRRL*HVFIKS Trigger: GGATTTTATGAACACATGGCATAGTCTTCTTCTACA...CACAGCAGAGCATGTAACATGGTCATTAGGAAGCATCATTGATCCATTTATCTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173136.2 |
||
| 3UTR-3UTR CCA 90 bp | AGTTCTCATTATCATAAATACAAGTGTGTGTCCCCCTCTCTCTGCTGTTCTATTCATTCAAAGTTTATGTaGAACTTATCTGGTACTGTG | + |
|
Preference number: 2 (lower is better) Translates to: SSHYHKYKCVSPSLCCSIHSKFM*NLSGTV Trigger: CACAGTACCAGATAAGTTCCACATAAACTTTGAATG...AATAGAACAGCAGAGAGAGGGGGACACACACTTGTATTTATGATAATGAGAACT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023156.13 |
||
| 3UTR TCA 72 bp | CACAGCCTAGAAGGAAAGAGGGGGCCCTTCCTCCCATaGACCGCCTTGTTCTTTGTACCCCCTCACTTCTCC | + |
|
Preference number: 3 (lower is better) Translates to: HSLEGKRGPFLP*TALFFVPPHFS Trigger: GGAGAAGTGAGGGGGTACAAAGAACAAGGCGGTTCATGGGAGGAAGGGCCCCCTCTTTCCTTCTAGGCTGTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000023156.13 |
||
| 3UTR CCA 72 bp | GCTCCAGGAGGGCTTGTGTTCCCTGGAGCACGTAGTTaGGACTTAGGACAACCAGGAGTCGTCTGCTTTTCT | + |
|
Preference number: 3 (lower is better) Translates to: APGGLVFPGARS*DLGQPGVVCFS Trigger: AGAAAAGCAGACGACTCCTGGTTGTCCTAAGTCCCAACTACGTGCTCCAGGGAACACAAGCCCTCCTGGAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174171.2 |
||
| 3UTR CCA 72 bp | CTTGTCATTGCTAGACCACCTGGGACTCTTCTTCACTaGCATGGCCACCTGCAACTGCTTCCAGAACCTGCC | + |
|
Preference number: 3 (lower is better) Translates to: LVIARPPGTLLH*HGHLQLLPEPA Trigger: GGCAGGTTCTGGAAGCAGTTGCAGGTGGCCATGCCAGTGAAGAAGAGTCCCAGGTGGTCTAGCAATGACAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174171.2 |
||
| 3UTR TCA 72 bp | GTCCCTGGGGACACAAATGTGCTGGCGGTTTGCTGTTaGGCTCTGTCTACCAGAACCTGCTCCCTTTCAAGT | + |
|
Preference number: 3 (lower is better) Translates to: VPGDTNVLAVCC*ALSTRTCSLSS Trigger: ACTTGAAAGGGAGCAGGTTCTGGTAGACAGAGCTCAACAGCAAACCGCCAGCACATTTGTGTCCCCAGGGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000096129.9 ENSMUST00000166294.9 |
||
| 3UTR-3UTR CAA 90 bp | CTCTCCTTTCCATTTAATGACCGTGAGCACCGTCTTAGCCCGCTTCAGCTCTTTTTTTCTAGGCCAGCCTaGAGCTCCAGGAGGGCTTGT | + |
|
Preference number: 3 (lower is better) Translates to: LSFPFNDREHRLSPLQLFFSRPA*SSRRAC Trigger: ACAAGCCCTCCTGGAGCTCAAGGCTGGCCTAGAAAA...AAAGAGCTGAAGCGGGCTAAGACGGTGCTCACGGTCATTAAATGGAAAGGAGAG 52% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt. Matches the following 1 transcripts: ENSMUST00000174171.2 |
||
| 3UTR-3UTR CAA 90 bp | GGCCACCTGCAACTGCTTCCAGAACCTGCCCTGAGGATACTTGGATTTCTCTCCAAAATGACGTTGATGTaGCCCCGGGAGGCCATATTT | + |
|
Preference number: 3 (lower is better) Translates to: GHLQLLPEPALRILGFLSKMTLM*PREAIF Trigger: AAATATGGCCTCCCGGGGCAACATCAACGTCATTTT...GGAGAGAAATCCAAGTATCCTCAGGGCAGGTTCTGGAAGCAGTTGCAGGTGGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000174171.2 |
||
| 3UTR GCA 72 bp | ATCACTGTAACGCTTAGTATTGCTGAGAGGCAGAGCTaGCAGCCGTACAGTCCCGGAATATTTTCCTCCCAG | + |
|
Preference number: 3 (lower is better) Translates to: ITVTLSIAERQS*QPYSPGIFSSQ Trigger: CTGGGAGGAAAATATTCCGGGACTGTACGGCTGGCAGCTCTGCCTCTCAGCAATACTAAGCGTTACAGTGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023156.13 |
||
| 3UTR-3UTR CAA 90 bp | GACCCTACTTGTCTGAAGCTGCTCTTTGTCCTTGGTGTTCAATCAAGCCTATGGCTTGCATCTGCTCCTTaGTTCCCCCTTTCTCTCACC | + |
|
Preference number: 3 (lower is better) Translates to: DPTCLKLLFVLGVQSSLWLASAP*FPLSLT Trigger: GGTGAGAGAAAGGGGGAACAAAGGAGCAGATGCAAG...CCATAGGCTTGATTGAACACCAAGGACAAAGAGCAGCTTCAGACAAGTAGGGTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000096129.9 ENSMUST00000166294.9 |
||
| 3UTR TCA 72 bp | TGCAGAAACTACAGAGAACAGAGGGAACAGCTGTGGTaGCAAGTCTGGCCCTTGTGTTCCCATAAGTCCATG | + |
|
Preference number: 3 (lower is better) Translates to: CRNYREQREQLW*QVWPLCSHKSM Trigger: CATGGACTTATGGGAACACAAGGGCCAGACTTGTCACCACAGCTGTTCCCTCTGTTCTCTGTAGTTTCTGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023156.13 |
||
| 3UTR GCA 72 bp | AAATCAGAGCCTTCTAGGGCCCGAGAAGAGTGTGCTTaGTCTTCCAAGGCCGTTAGAGGCAATAACTGGATA | + |
|
Preference number: 3 (lower is better) Translates to: KSEPSRAREECA*SSKAVRGNNWI Trigger: TATCCAGTTATTGCCTCTAACGGCCTTGGAAGAGCAAGCACACTCTTCTCGGGCCCTAGAAGGCTCTGATTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173136.2 |
||
| 3UTR GCA 72 bp | AGCTCTTTCACCTTCATGTCCTTCACAGCTTTGTACTaGACTAAAATGACGTTGATGTTGCCCCGGGAGGCC | + |
|
Preference number: 3 (lower is better) Translates to: SSFTFMSFTALY*TKMTLMLPREA Trigger: GGCCTCCCGGGGCAACATCAACGTCATTTTAGTGCAGTACAAAGCTGTGAAGGACATGAAGGTGAAAGAGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000174171.2 |
||
| 3UTR CCA 72 bp | CTATTTACAGGGGGCAATGGGAAGCAGGGATTCCTATaGAAAGATTTGGTCCCTGGGGACACAAATGTGCTG | + |
|
Preference number: 3 (lower is better) Translates to: LFTGGNGKQGFL*KDLVPGDTNVL Trigger: CAGCACATTTGTGTCCCCAGGGACCAAATCTTTCCATAGGAATCCCTGCTTCCCATTGCCCCCTGTAAATAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000096129.9 ENSMUST00000166294.9 |
||
| 3UTR-3UTR CAA 90 bp | GACCCTACTTGTCTGAAGCTGCTCTTTGTCCTTGGTGTTCAATCAAGCCTATGGCTCACCTTCTGGCCCTaGGAGGAATTTGAACTCAAC | + |
|
Preference number: 3 (lower is better) Translates to: DPTCLKLLFVLGVQSSLWLTFWP*EEFELN Trigger: GTTGAGTTCAAATTCCTCCAAGGGCCAGAAGGTGAG...CCATAGGCTTGATTGAACACCAAGGACAAAGAGCAGCTTCAGACAAGTAGGGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000096129.9 ENSMUST00000166294.9 |
||
| 3UTR TCA 72 bp | CCCTTTCAAGTCACTCCTTGGGATAGACACATCCTGTaGGTGTCAAAGCCCTGGTCTTTTGGGTGCAAAAAC | + |
|
Preference number: 3 (lower is better) Translates to: PFQVTPWDRHIL*VSKPWSFGCKN Trigger: GTTTTTGCACCCAAAAGACCAGGGCTTTGACACTCACAGGATGTGTCTATCCCAAGGAGTGACTTGAAAGGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000096129.9 ENSMUST00000166294.9 |
||
| 3UTR GCA 72 bp | GCAAGCTACACATTTCACATGGCAAGGACACAAAACTaGAAGCCCCTAAGCTGGACCCTTAGCATCAGCAAA | + |
|
Preference number: 3 (lower is better) Translates to: ASYTFHMARTQN*KPLSWTLSISK Trigger: TTTGCTGATGCTAAGGGTCCAGCTTAGGGGCTTGCAGTTTTGTGTCCTTGCCATGTGAAATGTGTAGCTTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000173136.2 |
||
| 3UTR CCA 72 bp | AAGCTGCTCTTTGTCCTTGGTGTTCAATCAAGCCTATaGGTGTTAGACTTGCATCTGCTCCTTTGTTCCCCC | + |
|
Preference number: 3 (lower is better) Translates to: KLLFVLGVQSSL*VLDLHLLLCSP Trigger: GGGGGAACAAAGGAGCAGATGCAAGTCTAACACCCATAGGCTTGATTGAACACCAAGGACAAAGAGCAGCTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000096129.9 ENSMUST00000166294.9 |
||
| 3UTR CCA 72 bp | GAAATTGCACAAGTTGCCACGCAGAAGCTGATTCAGTaGCAACAACCAAACAGAGGTGGGGAAACACTCATG | + |
|
Preference number: 3 (lower is better) Translates to: EIAQVATQKLIQ*QQPNRGGETLM Trigger: CATGAGTGTTTCCCCACCTCTGTTTGGTTGTTGCCACTGAATCAGCTTCTGCGTGGCAACTTGTGCAATTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000096129.9 ENSMUST00000166294.9 |
||
| 3UTR-3UTR CAA 90 bp | GGAGGTGATATAATAGTGGCTGGGATGAATACAGACTCCAACCGTGCAGAAACTGCCCTGAGAGCGCTTTaGCATTTTCTCACTCTCCAT | + |
|
Preference number: 3 (lower is better) Translates to: GGDIIVAGMNTDSNRAETALRAL*HFLTLH Trigger: ATGGAGAGTGAGAAAATGCAAAAGCGCTCTCAGGGC...AGTTTCTGCACGGTTGGAGTCTGTATTCATCCCAGCCACTATTATATCACCTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023156.13 |
||
| 3UTR-3UTR CAA 90 bp | TTCTCTCCTTTCCATTTAATGACCGTGAGCACCGTCTTAGCCCGCTTCAGCTCTTCGAAGATGCACAGCTaGTATCCAAACTCATTCTCC | + |
|
Preference number: 3 (lower is better) Translates to: FSPFHLMTVSTVLARFSSSKMHS*YPNSFS Trigger: GGAGAATGAGTTTGGATACAAGCTGTGCATCTTCGA...AGAGCTGAAGCGGGCTAAGACGGTGCTCACGGTCATTAAATGGAAAGGAGAGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174171.2 |
||
| 3UTR-3UTR CAA 90 bp | GAGCTGAGTCATTTCTGCTGTGTATCACAGCTAGGTACATATTCCATCATAAGGTCACTTCCTTTGCCTTaGATTGAGAGGCTGGCTCGG | + |
|
Preference number: 3 (lower is better) Translates to: ELSHFCCVSQLGTYSIIRSLPLP*IERLAR Trigger: CCGAGCCAGCCTCTCAATCAAAGGCAAAGGAAGTGA...CCTTATGATGGAATATGTACCTAGCTGTGATACACAGCAGAAATGACTCAGCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096129.9 |
||
| 3UTR-3UTR CAA 90 bp | CACTCTATTCGATTGTTTGCTTATGCTGAGACAATTCCAAGGGCTAAACTGGCCGATTTGTGGTCCTCCTaGGCTGGAGAAAATCAGAGC | + |
|
Preference number: 3 (lower is better) Translates to: HSIRLFAYAETIPRAKLADLWSS*AGENQS Trigger: GCTCTGATTTTCTCCAGCCAAGGAGGACCACAAATC...GGCCAGTTTAGCCCTTGGAATTGTCTCAGCATAAGCAAACAATCGAATAGAGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173136.2 |
||
| 3UTR GCA 72 bp | TATAATAGTGGCTGGGATGAATACAGACTCCAACCGTaGAGAAACTACAGAGAACAGAGGGAACAGCTGTGG | + |
|
Preference number: 3 (lower is better) Translates to: YNSGWDEYRLQP*RNYREQREQLW Trigger: CCACAGCTGTTCCCTCTGTTCTCTGTAGTTTCTGCACGGTTGGAGTCTGTATTCATCCCAGCCACTATTATA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023156.13 |
||
| 3UTR TCA 72 bp | CCACATCACAAGGAGACACCAGTTCCTAGCTACCTTTaGATCCCTTGGCAAGATCAGACTCTAAGCAACTTT | + |
|
Preference number: 3 (lower is better) Translates to: PHHKETPVPSYL*IPWQDQTLSNF Trigger: AAAGTTGCTTAGAGTCTGATCTTGCCAAGGGATTCAAAGGTAGCTAGGAACTGGTGTCTCCTTGTGATGTGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000096129.9 ENSMUST00000166294.9 |
||
| 3UTR TCA 72 bp | TGTTCTTACTTGCGTTGTCCTCAGGTCACAGTTGCCTaGGGCACTTGGACCCCTATTTCAGCATATATTCTT | + |
|
Preference number: 3 (lower is better) Translates to: CSYLRCPQVTVA*GTWTPISAYIL Trigger: AAGAATATATGCTGAAATAGGGGTCCAAGTGCCTCAGGCAACTGTGACCTGAGGACAACGCAAGTAAGAACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096129.9 |
||
| 3UTR GCA 72 bp | CATATGTTCTTACTTGCGTTGTCCTCAGGTCACAGTTaGCTGAGGCACTTGGACCCCTATTTCAGCATATAT | + |
|
Preference number: 3 (lower is better) Translates to: HMFLLALSSGHS*LRHLDPYFSIY Trigger: ATATATGCTGAAATAGGGGTCCAAGTGCCTCAGGCAACTGTGACCTGAGGACAACGCAAGTAAGAACATATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096129.9 |
||
| 3UTR CCA 72 bp | GAAAGACCCTACTTGTCTGAAGCTGCTCTTTGTCCTTaGTGTTCAATCAAGCCTATGGGTGTTAGACTTGCA | + |
|
Preference number: 3 (lower is better) Translates to: ERPYLSEAALCP*CSIKPMGVRLA Trigger: TGCAAGTCTAACACCCATAGGCTTGATTGAACACCAAGGACAAAGAGCAGCTTCAGACAAGTAGGGTCTTTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000096129.9 ENSMUST00000166294.9 |
||
| 3UTR-3UTR CAA 90 bp | AGTTCTCATTATCATAAATACAAGTGTGTGTCCCCCTCTCTCTGCTGTTCTATTGAACCGCCTTGTTCTTaGTACCCCCTCACTTCTCCT | + |
|
Preference number: 3 (lower is better) Translates to: SSHYHKYKCVSPSLCCSIEPPCS*YPLTSP Trigger: AGGAGAAGTGAGGGGGTACAAAGAACAAGGCGGTTC...AATAGAACAGCAGAGAGAGGGGGACACACACTTGTATTTATGATAATGAGAACT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000023156.13 |
||
| 3UTR-3UTR CAA 90 bp | GTTTTGAAACTTGTGAAAGAAATTGCACAAGTTGCCACGCAGAAGCTGATTCAGTTGACCCAAAGAGAGTaGGTAGAAACAGCAGCCACC | + |
|
Preference number: 3 (lower is better) Translates to: VLKLVKEIAQVATQKLIQLTQRE*VETAAT Trigger: GGTGGCTGCTGTTTCTACCAACTCTCTTTGGGTCAA...CTGAATCAGCTTCTGCGTGGCAACTTGTGCAATTTCTTTCACAAGTTTCAAAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096129.9 |
||
| 3UTR TCA 72 bp | TCCTGGGCTGGAGGATTCATCAGACCAACACTATTATaGAGGCCAGATGTTTTCAGCTTGGAGAAGGAATAT | + |
|
Preference number: 3 (lower is better) Translates to: SWAGGFIRPTLL*RPDVFSLEKEY Trigger: ATATTCCTTCTCCAAGCTGAAAACATCTGGCCTTCATAATAGTGTTGGTCTGATGAATCCTCCAGCCCAGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096129.9 |
||
| 3UTR GCA 72 bp | TGGAGAAGGAATATACATTTCCCATATGTTCTTACTTaGGTTGTCCTCAGGTCACAGTTGCCTGAGGCACTT | + |
|
Preference number: 3 (lower is better) Translates to: WRRNIHFPYVLT*VVLRSQLPEAL Trigger: AAGTGCCTCAGGCAACTGTGACCTGAGGACAACGCAAGTAAGAACATATGGGAAATGTATATTCCTTCTCCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096129.9 |
||
| 3UTR CCA 72 bp | ACCAATGACAAAAAGCATACTATTTACAGGGGGCAATaGGAAGCAGGGATTCCTATGGAAAGATTTGGTCCC | + |
|
Preference number: 3 (lower is better) Translates to: TNDKKHTIYRGQ*EAGIPMERFGP Trigger: GGGACCAAATCTTTCCATAGGAATCCCTGCTTCCCATTGCCCCCTGTAAATAGTATGCTTTTTGTCATTGGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000096129.9 ENSMUST00000166294.9 |
||
| 3UTR TCA 72 bp | ATAACACCCACATGGGTACTGGTCTCCTTCTTCATCTaGGCAATTCCCTGTTTAAGTCCTCAGATAAATGGA | + |
|
Preference number: 3 (lower is better) Translates to: ITPTWVLVSFFI*AIPCLSPQING Trigger: TCCATTTATCTGAGGACTTAAACAGGGAATTGCTCAGATGAAGAAGGAGACCAGTACCCATGTGGGTGTTAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173136.2 |
||
| 3UTR TCA 72 bp | GCTGCATGGAAGCTAGAGTTTTATCAGACTATGATGTaGGAGCACATCAAATGTGTGGGGCTAGGATGTTTT | + |
|
Preference number: 3 (lower is better) Translates to: AAWKLEFYQTMM*EHIKCVGLGCF Trigger: AAAACATCCTAGCCCCACACATTTGATGTGCTCTCACATCATAGTCTGATAAAACTCTAGCTTCCATGCAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000174202.8 |
||
| 3UTR-3UTR CAA 90 bp | CCTGGGTGCAGAAGTTCTCATTATCATAAATACAAGTGTGTGTCCCCCTCTCTCCTGGCTTTCAATATTTaGCCAATGACTACTGAAAGA | + |
|
Preference number: 3 (lower is better) Translates to: PGCRSSHYHKYKCVSPSLLAFNI*PMTTER Trigger: TCTTTCAGTAGTCATTGGCAAAATATTGAAAGCCAG...GAGAGAGGGGGACACACACTTGTATTTATGATAATGAGAACTTCTGCACCCAGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023156.13 |
||
| 3UTR-3UTR CAA 90 bp | GAGCTGAGTCATTTCTGCTGTGTATCACAGCTAGGTACATATTCCATCATAAGGGGCCCTTGGAGGAATTaGAACTCAACATCTAATTTC | + |
|
Preference number: 3 (lower is better) Translates to: ELSHFCCVSQLGTYSIIRGPWRN*NSTSNF Trigger: GAAATTAGATGTTGAGTTCAAATTCCTCCAAGGGCC...CCTTATGATGGAATATGTACCTAGCTGTGATACACAGCAGAAATGACTCAGCTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096129.9 |
||
| 3UTR TCA 72 bp | CCTTCAATTCTTCTGAGGCTCCCTGAATTTCGAAAATaGAACGGCTCATTTGCAGACAGTTTAACCATCACA | + |
|
Preference number: 3 (lower is better) Translates to: PSILLRLPEFRK*NGSFADSLTIT Trigger: TGTGATGGTTAAACTGTCTGCAAATGAGCCGTTTCATTTTCGAAATTCAGGGAGCCTCAGAAGAATTGAAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173136.2 |
||
| 3UTR TCA 72 bp | TGTGTTCTAAATGCCTTCAATTCTTCTGAGGCTCCCTaGATTTCGAAAATGAAACGGCTCATTTGCAGACAG | + |
|
Preference number: 3 (lower is better) Translates to: CVLNAFNSSEAP*ISKMKRLICRQ Trigger: CTGTCTGCAAATGAGCCGTTTCATTTTCGAAATTCAGGGAGCCTCAGAAGAATTGAAGGCATTTAGAACACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173136.2 |
||
| 3UTR TCA 72 bp | GAAACAAAGGCGTTGACAACATCGGAACCAGCATACTaGTCATTATCACAAAGATGGAAGCTTTCTCTTAGG | + |
|
Preference number: 3 (lower is better) Translates to: ETKALTTSEPAY*SLSQRWKLSLR Trigger: CCTAAGAGAAAGCTTCCATCTTTGTGATAATGATCAGTATGCTGGTTCCGATGTTGTCAACGCCTTTGTTTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174202.8 |
||
| 3UTR GCA 72 bp | AACTCAACATCTAATTTCAGAATTGTGAAGAACGGCTaGAGGCACCAAAATCTACCTACAGTTCCTTGCCAA | + |
|
Preference number: 3 (lower is better) Translates to: NSTSNFRIVKNG*RHQNLPTVPCQ Trigger: TTGGCAAGGAACTGTAGGTAGATTTTGGTGCCTGCAGCCGTTCTTCACAATTCTGAAATTAGATGTTGAGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000096129.9 ENSMUST00000166294.9 |
||
| 3UTR-3UTR CAA 90 bp | GGTAAGAACTTTGACAACTATATACAGAGAGCCAGGAATTCACAAATGGAACAGTCTTTAAACAGAGTTTaGAGTCACTGGGCAAAGCAG | + |
|
Preference number: 3 (lower is better) Translates to: GKNFDNYIQRARNSQMEQSLNRV*SHWAKQ Trigger: CTGCTTTGCCCAGTGACTCAAAACTCTGTTTAAAGA...CTGTTCCATTTGTGAATTCCTGGCTCTCTGTATATAGTTGTCAAAGTTCTTACC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023156.13 |
||
| 3UTR-3UTR CAA 90 bp | GATGGTGAGCAGTTTCCTCAAGACACCAAGAAACAAAGTCCTTCTTTGTTCAACCTTCATTTTCAGCTATaGCCTGCAAACACTGTTAAA | + |
|
Preference number: 3 (lower is better) Translates to: DGEQFPQDTKKQSPSLFNLHFQL*PANTVK Trigger: TTTAACAGTGTTTGCAGGCAATAGCTGAAAATGAAG...GTTGAACAAAGAAGGACTTTGTTTCTTGGTGTCTTGAGGAAACTGCTCACCATC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173136.2 |
||
| 3UTR TCA 72 bp | TTTTCGACAGTGGGAGTTCTAGTCAAACAGATGAAATaGAGGCTTTCCATGCATGTCTTAACTCTGTATCAC | + |
|
Preference number: 3 (lower is better) Translates to: FSTVGVLVKQMK*RLSMHVLTLYH Trigger: GTGATACAGAGTTAAGACATGCATGGAAAGCCTTCATTTCATCTGTTTGACTAGAACTCCCACTGTCGAAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096129.9 |
||
| 3UTR GCA 72 bp | ATGTGGCTGTATACATATACACTCTACATAGCATGCTaGTTTGTTAACCTGGGTGCAGAAGTTCTCATTATC | + |
|
Preference number: 3 (lower is better) Translates to: MWLYTYTLYIAC*FVNLGAEVLII Trigger: GATAATGAGAACTTCTGCACCCAGGTTAACAAAGCAGCATGCTATGTAGAGTGTATATGTATACAGCCACAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023156.13 |
||
| 3UTR GCA 72 bp | CATTTAACTGACTCAGTGTTTTGTGTCCGATGTGGGTaGAGAAATTCTCTCCTTTATTTCCTATTCACCACT | + |
|
Preference number: 3 (lower is better) Translates to: HLTDSVFCVRCG*RNSLLYFLFTT Trigger: AGTGGTGAATAGGAAATAAAGGAGAGAATTTCTGCACCCACATCGGACACAAAACACTGAGTCAGTTAAATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174202.8 |
||
| 3UTR GCA 72 bp | ACAGTATCTGTCTTTTCCAACATCAGAGAGTTAGGCTaGATGGAAGCTAGAGTTTTATCAGACTATGATGTG | + |
|
Preference number: 3 (lower is better) Translates to: TVSVFSNIRELG*MEARVLSDYDV Trigger: CACATCATAGTCTGATAAAACTCTAGCTTCCATGCAGCCTAACTCTCTGATGTTGGAAAAGACAGATACTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000174202.8 |
||
| 3UTR-3UTR CAA 90 bp | TATGTTTTGAAACTTGTGAAAGAAATTGCACAAGTTGCCACGCAGAAGCTGATTGGCCCTTGGAGGAATTaGAACTCAACATCTAATTTC | + |
|
Preference number: 3 (lower is better) Translates to: YVLKLVKEIAQVATQKLIGPWRN*NSTSNF Trigger: GAAATTAGATGTTGAGTTCAAATTCCTCCAAGGGCC...AATCAGCTTCTGCGTGGCAACTTGTGCAATTTCTTTCACAAGTTTCAAAACATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000096129.9 ENSMUST00000166294.9 |
||
| 3UTR TCA 72 bp | AAAGTAGAAACTCAAGCAATATTAGATGATCACTGTTaGGCAGTGGCAATGGGAGGTTCACAAACAAGAGAT | + |
|
Preference number: 3 (lower is better) Translates to: KVETQAILDDHC*AVAMGGSQTRD Trigger: ATCTCTTGTTTGTGAACCTCCCATTGCCACTGCTCAACAGTGATCATCTAATATTGCTTGAGTTTCTACTTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023156.13 |
||
| 3UTR TCA 72 bp | TGCAAGCTTTATTCTTTTCTGTGTGGCGTTTCATCTTaGTATCTTGGCACACTGAGGTTTGATGTGAACATT | + |
|
Preference number: 3 (lower is better) Translates to: CKLYSFLCGVSS*YLGTLRFDVNI Trigger: AATGTTCACATCAAACCTCAGTGTGCCAAGATATCAAGATGAAACGCCACACAGAAAAGAATAAAGCTTGCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173136.2 |
||
| 3UTR TCA 72 bp | ATTACTGAATTTTCACTGACTCCTGTTCAGGAATTATaGATGTCCTCCGGGCAGTTATTCTTCACAAGATCA | + |
|
Preference number: 3 (lower is better) Translates to: ITEFSLTPVQEL*MSSGQLFFTRS Trigger: TGATCTTGTGAAGAATAACTGCCCGGAGGACATTCATAATTCCTGAACAGGAGTCAGTGAAAATTCAGTAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173136.2 |
||
| 3UTR GCA 72 bp | TTATGTTTTGAAACTTGTGAAAGAAATTGCACAAGTTaGCACGCAGAAGCTGATTCAGTGGCAACAACCAAA | + |
|
Preference number: 3 (lower is better) Translates to: LCFETCERNCTS*HAEADSVATTK Trigger: TTTGGTTGTTGCCACTGAATCAGCTTCTGCGTGGCAACTTGTGCAATTTCTTTCACAAGTTTCAAAACATAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000096129.9 ENSMUST00000166294.9 |
||
| 3UTR GCA 72 bp | AGAGGTACAGTTCATGATCTGCTGGCAGATATCGTTTaGAAACTTCCACCTTTCTATCTATACAAACTTTTC | + |
|
Preference number: 3 (lower is better) Translates to: RGTVHDLLADIV*KLPPFYLYKLF Trigger: GAAAAGTTTGTATAGATAGAAAGGTGGAAGTTTGCAAACGATATCTGCCAGCAGATCATGAACTGTACCTCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173136.2 |
||
| 3UTR CCA 72 bp | AGAGTGAAACTATGTGAACTATTCTTAGAAGAGTTTTaGATGGTGAGCAGTTTCCTCAAGACACCAAGAAAC | + |
|
Preference number: 3 (lower is better) Translates to: RVKLCELFLEEF*MVSSFLKTPRN Trigger: GTTTCTTGGTGTCTTGAGGAAACTGCTCACCATCCAAAACTCTTCTAAGAATAGTTCACATAGTTTCACTCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173136.2 |
||
| 3UTR GCA 72 bp | CTTGAAACTAATAAAACCACTTCATTATTAATGATTTaGAGGGTGATCCATTTGGAGCAAGGTACTACAGGC | + |
|
Preference number: 3 (lower is better) Translates to: LETNKTTSLLMI*RVIHLEQGTTG Trigger: GCCTGTAGTACCTTGCTCCAAATGGATCACCCTGCAAATCATTAATAATGAAGTGGTTTTATTAGTTTCAAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023156.13 |
||
| 3UTR GCA 72 bp | TTTAGTCTTTTATATACTTCTAAGAACAGCTGTGGGTaGATAATTCAGGAAAAATTCCCAAAGGATGAGGTC | + |
|
Preference number: 3 (lower is better) Translates to: FSLLYTSKNSCG*IIQEKFPKDEV Trigger: GACCTCATCCTTTGGGAATTTTTCCTGAATTATGCACCCACAGCTGTTCTTAGAAGTATATAAAAGACTAAA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000174202.8 |
||
| 3UTR CCA 72 bp | AATTGGGACACAAACTTACCAGGATCAAGGAAGAGCTaGTTAAAGAAAATGGCTAGTGTTAGATATGATTAT | + |
|
Preference number: 3 (lower is better) Translates to: NWDTNLPGSRKS*LKKMASVRYDY Trigger: ATAATCATATCTAACACTAGCCATTTTCTTTAACCAGCTCTTCCTTGATCCTGGTAAGTTTGTGTCCCAATT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096129.9 |
||
| 3UTR CCA 72 bp | ACTAAAACCTATGGAAACAATTGGGTAGTTAACAAGTaGAGTGATCCTTTTGTTTCTCAATACAAGACAGTA | + |
|
Preference number: 3 (lower is better) Translates to: TKTYGNNWVVNK*SDPFVSQYKTV Trigger: TACTGTCTTGTATTGAGAAACAAAAGGATCACTCCACTTGTTAACTACCCAATTGTTTCCATAGGTTTTAGT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023156.13 |
||
| 3UTR CCA 72 bp | AAATGGTCTTACAGTACTAAAACCTATGGAAACAATTaGGTAGTTAACAAGTGGAGTGATCCTTTTGTTTCT | + |
|
Preference number: 3 (lower is better) Translates to: KWSYSTKTYGNN*VVNKWSDPFVS Trigger: AGAAACAAAAGGATCACTCCACTTGTTAACTACCCAATTGTTTCCATAGGTTTTAGTACTGTAAGACCATTT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023156.13 |
||
| CDS-3UTR TCA 90 bp | CTTGTGTTCCCTGGAGCACGTAGTTGGGACTTAGGACAACCAGGAGTCGTCTGCAATTGCCCGTGTCATTaGGGAGGGTGGGCCGGAACC | + |
|
Preference number: 4 (lower is better) Translates to: LVFPGARSWDLGQPGVVCNCPCH*GGWAGT Trigger: GGTTCCGGCCCACCCTCCTCAATGACACGGGCAATT...GCAGACGACTCCTGGTTGTCCTAAGTCCCAACTACGTGCTCCAGGGAACACAAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174171.2 |
||
| CDS-3UTR TCA 90 bp | GGCCACCTGCAACTGCTTCCAGAACCTGCCCTGAGGATACTTGGATTTCTCTCCCAGTCACAGTCCTGGTaGGGTGAAAGAGACGTCCGT | + |
|
Preference number: 4 (lower is better) Translates to: GHLQLLPEPALRILGFLSQSQSW*GERDVR Trigger: ACGGACGTCTCTTTCACCTCACCAGGACTGTGACTG...GGAGAGAAATCCAAGTATCCTCAGGGCAGGTTCTGGAAGCAGTTGCAGGTGGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174171.2 |
||
| CDS-3UTR TCA 90 bp | ATGTTGCCCCGGGAGGCCATATTTTCTAGGCCAGCCTTGAGCTCCAGGAGGGCTCAATGCATCCTTTGGTaGGCCCACCACCTTTACAGT | + |
|
Preference number: 4 (lower is better) Translates to: MLPREAIFSRPALSSRRAQCILW*AHHLYS Trigger: ACTGTAAAGGTGGTGGGCTCACCAAAGGATGCATTG...AGCCCTCCTGGAGCTCAAGGCTGGCCTAGAAAATATGGCCTCCCGGGGCAACAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000174171.2 |
||
| CDS-3UTR GCA 90 bp | AATGAAGCTCAGGGTCTCATCTGTGACAATTCCCCCAGGCAGGCTGTCTCTGTCTCCAGGTCCCGGTCTTaGCTGGTCCAGTACCAGATC | + |
|
Preference number: 4 (lower is better) Translates to: NEAQGLICDNSPRQAVSVSRSRS*LVQYQI Trigger: GATCTGGTACTGGACCAGGCAAGACCGGGACCTGGA...GACAGAGACAGCCTGCCTGGGGGAATTGTCACAGATGAGACCCTGAGCTTCATT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000174171.2 |
||
| CDS-3UTR CCA 90 bp | TTACTGGCCCACATCACAAGGAGACACCAGTTCCTAGCTACCTTTGAATCCCTTCATCGTGCCCGGGGCTaGCTCTGCTCCAGACACCCT | + |
|
Preference number: 4 (lower is better) Translates to: LLAHITRRHQFLATFESLHRARG*LCSRHP Trigger: AGGGTGTCTGGAGCAGAGCCAGCCCCGGGCACGATG...AAGGGATTCAAAGGTAGCTAGGAACTGGTGTCTCCTTGTGATGTGGGCCAGTAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000096129.9 ENSMUST00000166294.9 |
||
| 3UTR CAA 72 bp | CATCTGCATGCTCAAGGGTGCCTGATAGGTCCTGGCTaGAAGGCCATGTGCCATGGACCTTTGGTTGGCATG | + |
|
Preference number: 4 (lower is better) Translates to: HLHAQGCLIGPG*KAMCHGPLVGM Trigger: CATGCCAACCAAAGGTCCATGGCACATGGCCTTCAAGCCAGGACCTATCAGGCACCCTTGAGCATGCAGATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000096129.9 ENSMUST00000166294.9 |
||
| CDS-3UTR TCA 90 bp | TTACTGGCCCACATCACAAGGAGACACCAGTTCCTAGCTACCTTTGAATCCCTTGCAGCGACAGGCTGCTaGGGGTTTCCCTCGGTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: LLAHITRRHQFLATFESLAATGC*GFPSVL Trigger: AAGCACCGAGGGAAACCCTCAGCAGCCTGTCGCTGC...AAGGGATTCAAAGGTAGCTAGGAACTGGTGTCTCCTTGTGATGTGGGCCAGTAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000096129.9 ENSMUST00000166294.9 |
||
| CDS-3UTR GCA 90 bp | GTCTACCAGAACCTGCTCCCTTTCAAGTCACTCCTTGGGATAGACACATCCTGTGTTTCCCACTGGGGATaGGTGTGCATCTCTGCCCGG | + |
|
Preference number: 4 (lower is better) Translates to: VYQNLLPFKSLLGIDTSCVSHWG*VCISAR Trigger: CCGGGCAGAGATGCACACGCATCCCCAGTGGGAAAC...ACAGGATGTGTCTATCCCAAGGAGTGACTTGAAAGGGAGCAGGTTCTGGTAGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000096129.9 ENSMUST00000166294.9 |
||
| CDS-3UTR CCA 90 bp | ACCGTCTTAGCCCGCTTCAGCTCTTTCACCTTCATGTCCTTCACAGCTTTGTACGGTCCCGGTCTTGCCTaGTCCAGTACCAGATCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: TVLARFSSFTFMSFTALYGPGLA*SSTRSG Trigger: CCCTGATCTGGTACTGGACCAGGCAAGACCGGGACC...GTACAAAGCTGTGAAGGACATGAAGGTGAAAGAGCTGAAGCGGGCTAAGACGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174171.2 |
||
| CDS-3UTR CCA 90 bp | CTATTTACAGGGGGCAATGGGAAGCAGGGATTCCTATGGAAAGATTTGGTCCCTGCAAGAGCTGAGATCTaGGGAGCGGGTTCGGGTCGG | + |
|
Preference number: 4 (lower is better) Translates to: LFTGGNGKQGFLWKDLVPARAEI*GAGSGR Trigger: CCGACCCGAACCCGCTCCCCAGATCTCAGCTCTTGC...AGGGACCAAATCTTTCCATAGGAATCCCTGCTTCCCATTGCCCCCTGTAAATAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000096129.9 |
||
| 3UTR CAA 72 bp | AGATTTGGTCCCTGGGGACACAAATGTGCTGGCGGTTaGCTGTTGAGCTCTGTCTACCAGAACCTGCTCCCT | + |
|
Preference number: 4 (lower is better) Translates to: RFGPWGHKCAGG*LLSSVYQNLLP Trigger: AGGGAGCAGGTTCTGGTAGACAGAGCTCAACAGCAAACCGCCAGCACATTTGTGTCCCCAGGGACCAAATCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000096129.9 ENSMUST00000166294.9 |
||
| CDS-3UTR TCA 90 bp | GTCTACCAGAACCTGCTCCCTTTCAAGTCACTCCTTGGGATAGACACATCCTGTCTCCTTCACAGTAGGTaGCACAGCAGCGACAGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: VYQNLLPFKSLLGIDTSCLLHSR*HSSDRL Trigger: CAGCCTGTCGCTGCTGTGTCACCTACTGTGAAGGAG...ACAGGATGTGTCTATCCCAAGGAGTGACTTGAAAGGGAGCAGGTTCTGGTAGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000096129.9 ENSMUST00000166294.9 |
||
| CDS-3UTR TCA 90 bp | TCTGTCTACCAGAACCTGCTCCCTTTCAAGTCACTCCTTGGGATAGACACATCCCCCGGCTCTTGCTCCTaGGGTGACTTTCTCCTTCAC | + |
|
Preference number: 4 (lower is better) Translates to: SVYQNLLPFKSLLGIDTSPGSCS*GDFLLH Trigger: GTGAAGGAGAAAGTCACCTCAGGAGCAAGAGCCGGG...GGATGTGTCTATCCCAAGGAGTGACTTGAAAGGGAGCAGGTTCTGGTAGACAGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000096129.9 ENSMUST00000166294.9 |
||
| CDS-3UTR GCA 90 bp | TCTGTCTACCAGAACCTGCTCCCTTTCAAGTCACTCCTTGGGATAGACACATCCTCCAGGTCCCGGTCTTaGCTGGTCCAGTACCAGATC | + |
|
Preference number: 4 (lower is better) Translates to: SVYQNLLPFKSLLGIDTSSRSRS*LVQYQI Trigger: GATCTGGTACTGGACCAGGCAAGACCGGGACCTGGA...GGATGTGTCTATCCCAAGGAGTGACTTGAAAGGGAGCAGGTTCTGGTAGACAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000096129.9 ENSMUST00000166294.9 |
||
| CDS-3UTR CCA 90 bp | GACCCTACTTGTCTGAAGCTGCTCTTTGTCCTTGGTGTTCAATCAAGCCTATGGGGTCCCGGTCTTGCCTaGTCCAGTACCAGATCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: DPTCLKLLFVLGVQSSLWGPGLA*SSTRSG Trigger: CCCTGATCTGGTACTGGACCAGGCAAGACCGGGACC...CCATAGGCTTGATTGAACACCAAGGACAAAGAGCAGCTTCAGACAAGTAGGGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000096129.9 ENSMUST00000166294.9 |
||
| CDS-3UTR CCA 90 bp | CTTGTGTTCCCTGGAGCACGTAGTTGGGACTTAGGACAACCAGGAGTCGTCTGCACTGATGCGATTCTCTaGGAGGCGGAAGTTAATGGG | + |
|
Preference number: 4 (lower is better) Translates to: LVFPGARSWDLGQPGVVCTDAIL*EAEVNG Trigger: CCCATTAACTTCCGCCTCCCAGAGAATCGCATCAGT...GCAGACGACTCCTGGTTGTCCTAAGTCCCAACTACGTGCTCCAGGGAACACAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174171.2 |
||
| CDS-3UTR CCA 90 bp | CACTCTATTCGATTGTTTGCTTATGCTGAGACAATTCCAAGGGCTAAACTGGCCCATCGTGCCCGGGGCTaGCTCTGCTCCAGACACCCT | + |
|
Preference number: 4 (lower is better) Translates to: HSIRLFAYAETIPRAKLAHRARG*LCSRHP Trigger: AGGGTGTCTGGAGCAGAGCCAGCCCCGGGCACGATG...GGCCAGTTTAGCCCTTGGAATTGTCTCAGCATAAGCAAACAATCGAATAGAGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173136.2 |
||
| CDS-3UTR TCA 90 bp | AATGAAGCTCAGGGTCTCATCTGTGACAATTCCCCCAGGCAGGCTGTCTCTGTCCATCTTTCTCCTTACTaGTGCGATTCTCTGGGAGGC | + |
|
Preference number: 4 (lower is better) Translates to: NEAQGLICDNSPRQAVSVHLSPY*CDSLGG Trigger: GCCTCCCAGAGAATCGCATCAGTAAGGAGAAAGATG...GACAGAGACAGCCTGCCTGGGGGAATTGTCACAGATGAGACCCTGAGCTTCATT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000174171.2 |
||
| CDS-3UTR TCA 90 bp | TGCAAGCTACACATTTCACATGGCAAGGACACAAAACTGCAAGCCCCTAAGCTGCTCCTTCACAGTAGGTaGCACAGCAGCGACAGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: CKLHISHGKDTKLQAPKLLLHSR*HSSDRL Trigger: CAGCCTGTCGCTGCTGTGTCACCTACTGTGAAGGAG...CAGCTTAGGGGCTTGCAGTTTTGTGTCCTTGCCATGTGAAATGTGTAGCTTGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000173136.2 |
||
| CDS-3UTR GCA 90 bp | TTGTTCCCCCTTTCTCTCACCTTCTGGCCCTTGGAGGAATTTGAACTCAACATCTCCAGGTCCCGGTCTTaGCTGGTCCAGTACCAGATC | + |
|
Preference number: 4 (lower is better) Translates to: LFPLSLTFWPLEEFELNISRSRS*LVQYQI Trigger: GATCTGGTACTGGACCAGGCAAGACCGGGACCTGGA...GATGTTGAGTTCAAATTCCTCCAAGGGCCAGAAGGTGAGAGAAAGGGGGAACAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000096129.9 ENSMUST00000166294.9 |
||
| CDS-3UTR CCA 90 bp | CCTGGGTGCAGAAGTTCTCATTATCATAAATACAAGTGTGTGTCCCCCTCTCTCGGTCCCGGTCTTGCCTaGTCCAGTACCAGATCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: PGCRSSHYHKYKCVSPSLGPGLA*SSTRSG Trigger: CCCTGATCTGGTACTGGACCAGGCAAGACCGGGACC...GAGAGAGGGGGACACACACTTGTATTTATGATAATGAGAACTTCTGCACCCAGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023156.13 |
||
| CDS-3UTR CCA 90 bp | CTGCAGAAAGACCCTACTTGTCTGAAGCTGCTCTTTGTCCTTGGTGTTCAATCAGGTCCCGGTCTTGCCTaGTCCAGTACCAGATCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: LQKDPTCLKLLFVLGVQSGPGLA*SSTRSG Trigger: CCCTGATCTGGTACTGGACCAGGCAAGACCGGGACC...TGATTGAACACCAAGGACAAAGAGCAGCTTCAGACAAGTAGGGTCTTTCTGCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000096129.9 ENSMUST00000166294.9 |
||
| CDS-3UTR CCA 90 bp | TGCTTGTCATTGCTAGACCACCTGGGACTCTTCTTCACTGGCATGGCCACCTGCGACAACACGGTCATTTaGAGAATAGATCTGGGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: CLSLLDHLGLFFTGMATCDNTVI*RIDLGW Trigger: CCACCCCAGATCTATTCTCCAAATGACCGTGTTGTC...GCAGGTGGCCATGCCAGTGAAGAAGAGTCCCAGGTGGTCTAGCAATGACAAGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174171.2 |
||
| CDS-3UTR CCA 90 bp | CTGCAGAAAGACCCTACTTGTCTGAAGCTGCTCTTTGTCCTTGGTGTTCAATCACATTCCAGCCGGAGCTaGCGCTCAGACTTCTCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: LQKDPTCLKLLFVLGVQSHSSRS*RSDFSG Trigger: CCCTGAGAAGTCTGAGCGCCAGCTCCGGCTGGAATG...TGATTGAACACCAAGGACAAAGAGCAGCTTCAGACAAGTAGGGTCTTTCTGCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000096129.9 ENSMUST00000166294.9 |
||
| CDS-3UTR CCA 90 bp | AAGCTGCTCTTTGTCCTTGGTGTTCAATCAAGCCTATGGGTGTTAGACTTGCATGTTTCCCTCGGTGCTTaGACATCGTGCCCGGGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: KLLFVLGVQSSLWVLDLHVSLGA*TSCPGL Trigger: CAGCCCCGGGCACGATGTCCAAGCACCGAGGGAAAC...ATGCAAGTCTAACACCCATAGGCTTGATTGAACACCAAGGACAAAGAGCAGCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000096129.9 ENSMUST00000166294.9 |
||
| CDS-3UTR TCA 90 bp | TGCCCTGAGAGCGCTTTTGCATTTTCTCACTCTCCATTAGCACCATTAAAGCTTAATTGCCCGTGTCATTaGGGAGGGTGGGCCGGAACC | + |
|
Preference number: 4 (lower is better) Translates to: CPESAFAFSHSPLAPLKLNCPCH*GGWAGT Trigger: GGTTCCGGCCCACCCTCCTCAATGACACGGGCAATT...AAGCTTTAATGGTGCTAATGGAGAGTGAGAAAATGCAAAAGCGCTCTCAGGGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023156.13 |
||
| CDS-3UTR TCA 90 bp | AAGCTGCTCTTTGTCCTTGGTGTTCAATCAAGCCTATGGGTGTTAGACTTGCATAATTGCCCGTGTCATTaGGGAGGGTGGGCCGGAACC | + |
|
Preference number: 4 (lower is better) Translates to: KLLFVLGVQSSLWVLDLHNCPCH*GGWAGT Trigger: GGTTCCGGCCCACCCTCCTCAATGACACGGGCAATT...ATGCAAGTCTAACACCCATAGGCTTGATTGAACACCAAGGACAAAGAGCAGCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000096129.9 ENSMUST00000166294.9 |
||
| CDS-3UTR TCA 90 bp | CAGGGTCTCATCTGTGACAATTCCCCCAGGCAGGCTGTCTCTGTCGAAGATGCAAAACAGCTGTCCTTCTaGACAACTTCCAGGGGAAAT | + |
|
Preference number: 4 (lower is better) Translates to: QGLICDNSPRQAVSVEDAKQLSF*TTSRGN Trigger: ATTTCCCCTGGAAGTTGTTCAGAAGGACAGCTGTTT...TGCATCTTCGACAGAGACAGCCTGCCTGGGGGAATTGTCACAGATGAGACCCTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000174171.2 |
||
| CDS-3UTR TCA 90 bp | ATGGAAAGATTTGGTCCCTGGGGACACAAATGTGCTGGCGGTTTGCTGTTGAGCACAGTCCTGGTGAGGTaGAAGAGACGTCCGTTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: MERFGPWGHKCAGGLLLSTVLVR*KRRPFS Trigger: TGAAAACGGACGTCTCTTTCACCTCACCAGGACTGT...GCTCAACAGCAAACCGCCAGCACATTTGTGTCCCCAGGGACCAAATCTTTCCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000096129.9 ENSMUST00000166294.9 |
||
| CDS-3UTR TCA 90 bp | ATTCCCCCAGGCAGGCTGTCTCTGTCGAAGATGCACAGCTTGTATCCAAACTCAACAGTCCTGGTGAGGTaGAAGAGACGTCCGTTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: IPPGRLSLSKMHSLYPNSTVLVR*KRRPFS Trigger: TGAAAACGGACGTCTCTTTCACCTCACCAGGACTGT...TGAGTTTGGATACAAGCTGTGCATCTTCGACAGAGACAGCCTGCCTGGGGGAAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000174171.2 |
||
| CDS-3UTR TCA 90 bp | AGTCATCTGCATGCTCAAGGGTGCCTGATAGGTCCTGGCTTGAAGGCCATGTGCGAACATGATCCAGACTaGTGTCAGACTGAGAAGAAC | + |
|
Preference number: 4 (lower is better) Translates to: SHLHAQGCLIGPGLKAMCEHDPD*CQTEKN Trigger: GTTCTTCTCAGTCTGACATCAGTCTGGATCATGTTC...GCACATGGCCTTCAAGCCAGGACCTATCAGGCACCCTTGAGCATGCAGATGACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000096129.9 ENSMUST00000166294.9 |
||
| CDS-3UTR TCA 90 bp | GAGCTGAGTCATTTCTGCTGTGTATCACAGCTAGGTACATATTCCATCATAAGGGCAGCGACAGGCTGCTaGGGGTTTCCCTCGGTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: ELSHFCCVSQLGTYSIIRAATGC*GFPSVL Trigger: AAGCACCGAGGGAAACCCTCAGCAGCCTGTCGCTGC...CCTTATGATGGAATATGTACCTAGCTGTGATACACAGCAGAAATGACTCAGCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096129.9 |
||
| CDS-3UTR GCA 90 bp | TCTGTCTACCAGAACCTGCTCCCTTTCAAGTCACTCCTTGGGATAGACACATCCTTCACCTTGGCAGCCTaGTCAGCTTCCCCTTTGGTA | + |
|
Preference number: 4 (lower is better) Translates to: SVYQNLLPFKSLLGIDTSFTLAA*SASPLV Trigger: TACCAAAGGGGAAGCTGAGCAGGCTGCCAAGGTGAA...GGATGTGTCTATCCCAAGGAGTGACTTGAAAGGGAGCAGGTTCTGGTAGACAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000096129.9 ENSMUST00000166294.9 |
||
| CDS-3UTR GCA 90 bp | AAGCTGCTCTTTGTCCTTGGTGTTCAATCAAGCCTATGGGTGTTAGACTTGCATGTTTCCCACTGGGGATaGGTGTGCATCTCTGCCCGG | + |
|
Preference number: 4 (lower is better) Translates to: KLLFVLGVQSSLWVLDLHVSHWG*VCISAR Trigger: CCGGGCAGAGATGCACACGCATCCCCAGTGGGAAAC...ATGCAAGTCTAACACCCATAGGCTTGATTGAACACCAAGGACAAAGAGCAGCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000096129.9 ENSMUST00000166294.9 |
||
| CDS-3UTR CCA 90 bp | AAATTGGGACACAAACTTACCAGGATCAAGGAAGAGCTGGTTAAAGAAAATGGCCATCGTGCCCGGGGCTaGCTCTGCTCCAGACACCCT | + |
|
Preference number: 4 (lower is better) Translates to: KLGHKLTRIKEELVKENGHRARG*LCSRHP Trigger: AGGGTGTCTGGAGCAGAGCCAGCCCCGGGCACGATG...GCCATTTTCTTTAACCAGCTCTTCCTTGATCCTGGTAAGTTTGTGTCCCAATTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000096129.9 |
||
| CDS-3UTR CCA 90 bp | GAGCTGAGTCATTTCTGCTGTGTATCACAGCTAGGTACATATTCCATCATAAGGGTTTCCCTCGGTGCTTaGACATCGTGCCCGGGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: ELSHFCCVSQLGTYSIIRVSLGA*TSCPGL Trigger: CAGCCCCGGGCACGATGTCCAAGCACCGAGGGAAAC...CCTTATGATGGAATATGTACCTAGCTGTGATACACAGCAGAAATGACTCAGCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096129.9 |
||
| CDS-3UTR TCA 90 bp | TGCTTGTCATTGCTAGACCACCTGGGACTCTTCTTCACTGGCATGGCCACCTGCATCTCATGGCAGAATTaGAACAGCTGTCCTTCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: CLSLLDHLGLFFTGMATCISWQN*NSCPSE Trigger: TTCAGAAGGACAGCTGTTTCAATTCTGCCATGAGAT...GCAGGTGGCCATGCCAGTGAAGAAGAGTCCCAGGTGGTCTAGCAATGACAAGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174171.2 |
||
| CDS-3UTR TCA 90 bp | TGCTTGTCATTGCTAGACCACCTGGGACTCTTCTTCACTGGCATGGCCACCTGCTTGAAACCAAGGGGATaGAAAAGCTCAAGTTCATGC | + |
|
Preference number: 4 (lower is better) Translates to: CLSLLDHLGLFFTGMATCLKPRG*KSSSSC Trigger: GCATGAACTTGAGCTTTTTCATCCCCTTGGTTTCAA...GCAGGTGGCCATGCCAGTGAAGAAGAGTCCCAGGTGGTCTAGCAATGACAAGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000174171.2 |
||
| CDS-3UTR TCA 90 bp | CAGAAAGAGAGAAAACATAAGGAGAGTAGTCACAGACTTCATAACACCCACATGGCAGCGACAGGCTGCTaGGGGTTTCCCTCGGTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: QKERKHKESSHRLHNTHMAATGC*GFPSVL Trigger: AAGCACCGAGGGAAACCCTCAGCAGCCTGTCGCTGC...CATGTGGGTGTTATGAAGTCTGTGACTACTCTCCTTATGTTTTCTCTCTTTCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000173136.2 |
||
| CDS-3UTR TCA 90 bp | AAGCTGCTCTTTGTCCTTGGTGTTCAATCAAGCCTATGGGTGTTAGACTTGCATCCCGGCTCTTGCTCCTaGGGTGACTTTCTCCTTCAC | + |
|
Preference number: 4 (lower is better) Translates to: KLLFVLGVQSSLWVLDLHPGSCS*GDFLLH Trigger: GTGAAGGAGAAAGTCACCTCAGGAGCAAGAGCCGGG...ATGCAAGTCTAACACCCATAGGCTTGATTGAACACCAAGGACAAAGAGCAGCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000096129.9 ENSMUST00000166294.9 |
||
| CDS-3UTR GCA 90 bp | GACCCTACTTGTCTGAAGCTGCTCTTTGTCCTTGGTGTTCAATCAAGCCTATGGTTCACCTTGGCAGCCTaGTCAGCTTCCCCTTTGGTA | + |
|
Preference number: 4 (lower is better) Translates to: DPTCLKLLFVLGVQSSLWFTLAA*SASPLV Trigger: TACCAAAGGGGAAGCTGAGCAGGCTGCCAAGGTGAA...CCATAGGCTTGATTGAACACCAAGGACAAAGAGCAGCTTCAGACAAGTAGGGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000096129.9 ENSMUST00000166294.9 |
||
| CDS-3UTR GCA 90 bp | AAGCTGCTCTTTGTCCTTGGTGTTCAATCAAGCCTATGGGTGTTAGACTTGCATATGCCTGGATGGGGTTaGTCAAGCGGACGGTACTCC | + |
|
Preference number: 4 (lower is better) Translates to: KLLFVLGVQSSLWVLDLHMPGWG*SSGRYS Trigger: GGAGTACCGTCCGCTTGAGCAACCCCATCCAGGCAT...ATGCAAGTCTAACACCCATAGGCTTGATTGAACACCAAGGACAAAGAGCAGCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000096129.9 ENSMUST00000166294.9 |
||
| CDS-3UTR GCA 90 bp | CACTCTATTCGATTGTTTGCTTATGCTGAGACAATTCCAAGGGCTAAACTGGCCATGCCTGGATGGGGTTaGTCAAGCGGACGGTACTCC | + |
|
Preference number: 4 (lower is better) Translates to: HSIRLFAYAETIPRAKLAMPGWG*SSGRYS Trigger: GGAGTACCGTCCGCTTGAGCAACCCCATCCAGGCAT...GGCCAGTTTAGCCCTTGGAATTGTCTCAGCATAAGCAAACAATCGAATAGAGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173136.2 |
||
| CDS-3UTR GCA 90 bp | TTGTTCCCCCTTTCTCTCACCTTCTGGCCCTTGGAGGAATTTGAACTCAACATCACAGACTCCTTCAGCTaGATGATGCCTGGATGGGGT | + |
|
Preference number: 4 (lower is better) Translates to: LFPLSLTFWPLEEFELNITDSFS*MMPGWG Trigger: ACCCCATCCAGGCATCATGCAGCTGAAGGAGTCTGT...GATGTTGAGTTCAAATTCCTCCAAGGGCCAGAAGGTGAGAGAAAGGGGGAACAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000096129.9 ENSMUST00000166294.9 |
||
| CDS-3UTR GCA 90 bp | AAAGCATACTATTTACAGGGGGCAATGGGAAGCAGGGATTCCTATGGAAAGATTCACTGGGGATGCGTGTaGATCTCTGCCCGGCTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: KAYYLQGAMGSRDSYGKIHWGCV*ISARLL Trigger: CAAGAGCCGGGCAGAGATGCACACGCATCCCCAGTG...AATCTTTCCATAGGAATCCCTGCTTCCCATTGCCCCCTGTAAATAGTATGCTTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000096129.9 ENSMUST00000166294.9 |
||
| CDS-3UTR GCA 90 bp | TTGGATGGTGAGCAGTTTCCTCAAGACACCAAGAAACAAAGTCCTTCTTTGTTCCACTGGGGATGCGTGTaGATCTCTGCCCGGCTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: LDGEQFPQDTKKQSPSLFHWGCV*ISARLL Trigger: CAAGAGCCGGGCAGAGATGCACACGCATCCCCAGTG...GAACAAAGAAGGACTTTGTTTCTTGGTGTCTTGAGGAAACTGCTCACCATCCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173136.2 |
||
| CDS-3UTR CCA 90 bp | AGAGAGTTAGGCTGCATGGAAGCTAGAGTTTTATCAGACTATGATGTGAGAGCAGGTCCCGGTCTTGCCTaGTCCAGTACCAGATCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: RELGCMEARVLSDYDVRAGPGLA*SSTRSG Trigger: CCCTGATCTGGTACTGGACCAGGCAAGACCGGGACC...TGCTCTCACATCATAGTCTGATAAAACTCTAGCTTCCATGCAGCCTAACTCTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174202.8 |
||
| CDS-3UTR CCA 90 bp | GAGCTGAGTCATTTCTGCTGTGTATCACAGCTAGGTACATATTCCATCATAAGGCATTCCAGCCGGAGCTaGCGCTCAGACTTCTCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: ELSHFCCVSQLGTYSIIRHSSRS*RSDFSG Trigger: CCCTGAGAAGTCTGAGCGCCAGCTCCGGCTGGAATG...CCTTATGATGGAATATGTACCTAGCTGTGATACACAGCAGAAATGACTCAGCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096129.9 |
||
| CDS-3UTR TCA 90 bp | TTACTGGCCCACATCACAAGGAGACACCAGTTCCTAGCTACCTTTGAATCCCTTCATCTTTCTCCTTACTaGTGCGATTCTCTGGGAGGC | + |
|
Preference number: 4 (lower is better) Translates to: LLAHITRRHQFLATFESLHLSPY*CDSLGG Trigger: GCCTCCCAGAGAATCGCATCAGTAAGGAGAAAGATG...AAGGGATTCAAAGGTAGCTAGGAACTGGTGTCTCCTTGTGATGTGGGCCAGTAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000096129.9 ENSMUST00000166294.9 |
||
| CDS-3UTR TCA 90 bp | AGTGGGAGTTCTAGTCAAACAGATGAAATGAAGGCTTTCCATGCATGTCTTAACAATTGCCCGTGTCATTaGGGAGGGTGGGCCGGAACC | + |
|
Preference number: 4 (lower is better) Translates to: SGSSSQTDEMKAFHACLNNCPCH*GGWAGT Trigger: GGTTCCGGCCCACCCTCCTCAATGACACGGGCAATT...GTTAAGACATGCATGGAAAGCCTTCATTTCATCTGTTTGACTAGAACTCCCACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096129.9 |
||
| CDS-3UTR TCA 90 bp | AAGCTGCTCTTTGTCCTTGGTGTTCAATCAAGCCTATGGGTGTTAGACTTGCATCAGTCACAGTCCTGGTaGGGTGAAAGAGACGTCCGT | + |
|
Preference number: 4 (lower is better) Translates to: KLLFVLGVQSSLWVLDLHQSQSW*GERDVR Trigger: ACGGACGTCTCTTTCACCTCACCAGGACTGTGACTG...ATGCAAGTCTAACACCCATAGGCTTGATTGAACACCAAGGACAAAGAGCAGCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000096129.9 ENSMUST00000166294.9 |
||
| CDS-3UTR TCA 90 bp | TTGGATGGTGAGCAGTTTCCTCAAGACACCAAGAAACAAAGTCCTTCTTTGTTCCCCGGCTCTTGCTCCTaGGGTGACTTTCTCCTTCAC | + |
|
Preference number: 4 (lower is better) Translates to: LDGEQFPQDTKKQSPSLFPGSCS*GDFLLH Trigger: GTGAAGGAGAAAGTCACCTCAGGAGCAAGAGCCGGG...GAACAAAGAAGGACTTTGTTTCTTGGTGTCTTGAGGAAACTGCTCACCATCCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173136.2 |
||
| CDS-3UTR GCA 90 bp | AGAGAGTTAGGCTGCATGGAAGCTAGAGTTTTATCAGACTATGATGTGAGAGCATCCAGGTCCCGGTCTTaGCTGGTCCAGTACCAGATC | + |
|
Preference number: 4 (lower is better) Translates to: RELGCMEARVLSDYDVRASRSRS*LVQYQI Trigger: GATCTGGTACTGGACCAGGCAAGACCGGGACCTGGA...TGCTCTCACATCATAGTCTGATAAAACTCTAGCTTCCATGCAGCCTAACTCTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174202.8 |
||
| CDS-3UTR GCA 90 bp | CAGGGTCTCATCTGTGACAATTCCCCCAGGCAGGCTGTCTCTGTCGAAGATGCAAAAAGCTCAAGTTCATaGCCTCGGGTAGTACATTAT | + |
|
Preference number: 4 (lower is better) Translates to: QGLICDNSPRQAVSVEDAKSSSS*PRVVHY Trigger: ATAATGTACTACCCGAGGGCATGAACTTGAGCTTTT...TGCATCTTCGACAGAGACAGCCTGCCTGGGGGAATTGTCACAGATGAGACCCTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000174171.2 |
||
| CDS-3UTR GCA 90 bp | AAGACACCAAGAAACAAAGTCCTTCTTTGTTCAACACTACAGCCTGTTCTCATGGTTTCCCACTGGGGATaGGTGTGCATCTCTGCCCGG | + |
|
Preference number: 4 (lower is better) Translates to: KTPRNKVLLCSTLQPVLMVSHWG*VCISAR Trigger: CCGGGCAGAGATGCACACGCATCCCCAGTGGGAAAC...CATGAGAACAGGCTGTAGTGTTGAACAAAGAAGGACTTTGTTTCTTGGTGTCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173136.2 |
||
| CDS-3UTR CCA 90 bp | GACCCTACTTGTCTGAAGCTGCTCTTTGTCCTTGGTGTTCAATCAAGCCTATGGGTGGCAATGGAGTTCTaGCACATGACACCCAGCTTA | + |
|
Preference number: 4 (lower is better) Translates to: DPTCLKLLFVLGVQSSLWVAMEF*HMTPSL Trigger: TAAGCTGGGTGTCATGTGCCAGAACTCCATTGCCAC...CCATAGGCTTGATTGAACACCAAGGACAAAGAGCAGCTTCAGACAAGTAGGGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000096129.9 ENSMUST00000166294.9 |
||
| CDS-3UTR CCA 90 bp | TGCAAGCTACACATTTCACATGGCAAGGACACAAAACTGCAAGCCCCTAAGCTGGTGGCAATGGAGTTCTaGCACATGACACCCAGCTTA | + |
|
Preference number: 4 (lower is better) Translates to: CKLHISHGKDTKLQAPKLVAMEF*HMTPSL Trigger: TAAGCTGGGTGTCATGTGCCAGAACTCCATTGCCAC...CAGCTTAGGGGCTTGCAGTTTTGTGTCCTTGCCATGTGAAATGTGTAGCTTGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000173136.2 |
||
| CDS-3UTR CCA 90 bp | TCTGTCTACCAGAACCTGCTCCCTTTCAAGTCACTCCTTGGGATAGACACATCCTGGAGCCAGAATGTTTaGACTTTTCTCCCTTCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: SVYQNLLPFKSLLGIDTSWSQNV*TFLPSS Trigger: GCTGGAAGGGAGAAAAGTCCAAACATTCTGGCTCCA...GGATGTGTCTATCCCAAGGAGTGACTTGAAAGGGAGCAGGTTCTGGTAGACAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000096129.9 ENSMUST00000166294.9 |
||
| CDS-3UTR CCA 90 bp | CAGAAAGAGAGAAAACATAAGGAGAGTAGTCACAGACTTCATAACACCCACATGCATTCCAGCCGGAGCTaGCGCTCAGACTTCTCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: QKERKHKESSHRLHNTHMHSSRS*RSDFSG Trigger: CCCTGAGAAGTCTGAGCGCCAGCTCCGGCTGGAATG...CATGTGGGTGTTATGAAGTCTGTGACTACTCTCCTTATGTTTTCTCTCTTTCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173136.2 |
||
| 3UTR CAA 72 bp | GTCCTTGGTGTTCAATCAAGCCTATGGGTGTTAGACTaGCATCTGCTCCTTTGTTCCCCCTTTCTCTCACCT | + |
|
Preference number: 4 (lower is better) Translates to: VLGVQSSLWVLD*HLLLCSPFLSP Trigger: AGGTGAGAGAAAGGGGGAACAAAGGAGCAGATGCAAGTCTAACACCCATAGGCTTGATTGAACACCAAGGAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000096129.9 ENSMUST00000166294.9 |
||
| 3UTR CAA 72 bp | CTTGCGTTGTCCTCAGGTCACAGTTGCCTGAGGCACTaGGACCCCTATTTCAGCATATATTCTTTAGCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: LALSSGHSCLRH*DPYFSIYSLAE Trigger: CTCAGCTAAAGAATATATGCTGAAATAGGGGTCCAAGTGCCTCAGGCAACTGTGACCTGAGGACAACGCAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096129.9 |
||
| 3UTR CAA 72 bp | GCTTTCCATGCATGTCTTAACTCTGTATCACTTCCTTaGCCTTTGATTGAGAGGCTGGCTCGGGGCCAAACT | + |
|
Preference number: 4 (lower is better) Translates to: AFHACLNSVSLP*PLIERLARGQT Trigger: AGTTTGGCCCCGAGCCAGCCTCTCAATCAAAGGCAAAGGAAGTGATACAGAGTTAAGACATGCATGGAAAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096129.9 |
||
| 3UTR CAA 72 bp | CGCTTCAGCTCTTTCACCTTCATGTCCTTCACAGCTTaGTACTGCACTAAAATGACGTTGATGTTGCCCCGG | + |
|
Preference number: 4 (lower is better) Translates to: RFSSFTFMSFTA*YCTKMTLMLPR Trigger: CCGGGGCAACATCAACGTCATTTTAGTGCAGTACAAAGCTGTGAAGGACATGAAGGTGAAAGAGCTGAAGCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000174171.2 |
||
| CDS-3UTR TCA 90 bp | GGAGGTGATATAATAGTGGCTGGGATGAATACAGACTCCAACCGTGCAGAAACTCATCTTTCTCCTTACTaGTGCGATTCTCTGGGAGGC | + |
|
Preference number: 4 (lower is better) Translates to: GGDIIVAGMNTDSNRAETHLSPY*CDSLGG Trigger: GCCTCCCAGAGAATCGCATCAGTAAGGAGAAAGATG...AGTTTCTGCACGGTTGGAGTCTGTATTCATCCCAGCCACTATTATATCACCTCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023156.13 |
||
| CDS-3UTR TCA 90 bp | CAGGGTCTCATCTGTGACAATTCCCCCAGGCAGGCTGTCTCTGTCGAAGATGCACTACATTTGGACATGTaGTCTTATGAATGCCATGTT | + |
|
Preference number: 4 (lower is better) Translates to: QGLICDNSPRQAVSVEDALHLDM*SYECHV Trigger: AACATGGCATTCATAAGATCACATGTCCAAATGTAG...TGCATCTTCGACAGAGACAGCCTGCCTGGGGGAATTGTCACAGATGAGACCCTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000174171.2 |
||
| CDS-3UTR TCA 90 bp | GGCCACCTGCAACTGCTTCCAGAACCTGCCCTGAGGATACTTGGATTTCTCTCCTCGGGTAGTACATTATaGAAGTCCACTATTTCAGTA | + |
|
Preference number: 4 (lower is better) Translates to: GHLQLLPEPALRILGFLSSGSTL*KSTISV Trigger: TACTGAAATAGTGGACTTTCATAATGTACTACCCGA...GGAGAGAAATCCAAGTATCCTCAGGGCAGGTTCTGGAAGCAGTTGCAGGTGGCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174171.2 |
||
| CDS-3UTR TCA 90 bp | AAGTACTCTTTACTGGCCCACATCACAAGGAGACACCAGTTCCTAGCTACCTTTCAATGCATCCTTTGGTaGGCCCACCACCTTTACAGT | + |
|
Preference number: 4 (lower is better) Translates to: KYSLLAHITRRHQFLATFQCILW*AHHLYS Trigger: ACTGTAAAGGTGGTGGGCTCACCAAAGGATGCATTG...AAAGGTAGCTAGGAACTGGTGTCTCCTTGTGATGTGGGCCAGTAAAGAGTACTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000096129.9 ENSMUST00000166294.9 |
||
| CDS-3UTR GCA 90 bp | ATTGCTAGACCACCTGGGACTCTTCTTCACTGGCATGGCCACCTGCAACTGCTTGAAATGCAACTTTGCTaGAGTAAGTTGTGTTCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: IARPPGTLLHWHGHLQLLEMQLC*SKLCSS Trigger: TGAGGAACACAACTTACTGCAGCAAAGTTGCATTTC...AAGCAGTTGCAGGTGGCCATGCCAGTGAAGAAGAGTCCCAGGTGGTCTAGCAAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174171.2 |
||
| CDS-3UTR GCA 90 bp | ACAATTCCCCCAGGCAGGCTGTCTCTGTCGAAGATGCACAGCTTGTATCCAAACAACTTCCAGGGGAAATaGAACTTTGCTGCAGTAAGT | + |
|
Preference number: 4 (lower is better) Translates to: TIPPGRLSLSKMHSLYPNNFQGK*NFAAVS Trigger: ACTTACTGCAGCAAAGTTGCATTTCCCCTGGAAGTT...GTTTGGATACAAGCTGTGCATCTTCGACAGAGACAGCCTGCCTGGGGGAATTGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000174171.2 |
||
| CDS-3UTR GCA 90 bp | TGCCCTGAGAGCGCTTTTGCATTTTCTCACTCTCCATTAGCACCATTAAAGCTTTTCACCTTGGCAGCCTaGTCAGCTTCCCCTTTGGTA | + |
|
Preference number: 4 (lower is better) Translates to: CPESAFAFSHSPLAPLKLFTLAA*SASPLV Trigger: TACCAAAGGGGAAGCTGAGCAGGCTGCCAAGGTGAA...AAGCTTTAATGGTGCTAATGGAGAGTGAGAAAATGCAAAAGCGCTCTCAGGGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000023156.13 |
||
| CDS-3UTR GCA 90 bp | TACTTGTCTGAAGCTGCTCTTTGTCCTTGGTGTTCAATCAAGCCTATGGGTGTTACAGACTCCTTCAGCTaGATGATGCCTGGATGGGGT | + |
|
Preference number: 4 (lower is better) Translates to: YLSEAALCPWCSIKPMGVTDSFS*MMPGWG Trigger: ACCCCATCCAGGCATCATGCAGCTGAAGGAGTCTGT...AACACCCATAGGCTTGATTGAACACCAAGGACAAAGAGCAGCTTCAGACAAGTA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000096129.9 ENSMUST00000166294.9 |
||
| CDS-3UTR GCA 90 bp | GAGCTGAGTCATTTCTGCTGTGTATCACAGCTAGGTACATATTCCATCATAAGGCGGGTTCGGGTCGGGTaGCATTTTGTATCCACTGAC | + |
|
Preference number: 4 (lower is better) Translates to: ELSHFCCVSQLGTYSIIRRVRVG*HFVSTD Trigger: GTCAGTGGATACAAAATGGCACCCGACCCGAACCCG...CCTTATGATGGAATATGTACCTAGCTGTGATACACAGCAGAAATGACTCAGCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096129.9 |
||
| CDS-3UTR CCA 90 bp | ACCGTCTTAGCCCGCTTCAGCTCTTTCACCTTCATGTCCTTCACAGCTTTGTACCTTGGATTTGTCGCATaGTATCTAGTCCCCAGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: TVLARFSSFTFMSFTALYLGFVA*YLVPSH Trigger: ATGACTGGGGACTAGATACCATGCGACAAATCCAAG...GTACAAAGCTGTGAAGGACATGAAGGTGAAAGAGCTGAAGCGGGCTAAGACGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174171.2 |
||
| CDS-3UTR CCA 90 bp | AGTCATCTGCATGCTCAAGGGTGCCTGATAGGTCCTGGCTTGAAGGCCATGTGCTCATCTTCAAACACTTaGATTTGTCGCATGGTATCT | + |
|
Preference number: 4 (lower is better) Translates to: SHLHAQGCLIGPGLKAMCSSSNT*ICRMVS Trigger: AGATACCATGCGACAAATCCAAGTGTTTGAAGATGA...GCACATGGCCTTCAAGCCAGGACCTATCAGGCACCCTTGAGCATGCAGATGACT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000096129.9 ENSMUST00000166294.9 |
||
| CDS-3UTR CCA 90 bp | TTAATGACCGTGAGCACCGTCTTAGCCCGCTTCAGCTCTTTCACCTTCATGTCCATACCAAGTGACCGATaGTTTGACACTGGAAGGAAA | + |
|
Preference number: 4 (lower is better) Translates to: LMTVSTVLARFSSFTFMSIPSDR*FDTGRK Trigger: TTTCCTTCCAGTGTCAAACCATCGGTCACTTGGTAT...GGACATGAAGGTGAAAGAGCTGAAGCGGGCTAAGACGGTGCTCACGGTCATTAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174171.2 |
||
| CDS-3UTR CCA 90 bp | CTTGGGATAGACACATCCTGTGAGTGTCAAAGCCCTGGTCTTTTGGGTGCAAAAGACAACACGGTCATTTaGAGAATAGATCTGGGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: LGIDTSCECQSPGLLGAKDNTVI*RIDLGW Trigger: CCACCCCAGATCTATTCTCCAAATGACCGTGTTGTC...TTTTGCACCCAAAAGACCAGGGCTTTGACACTCACAGGATGTGTCTATCCCAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000096129.9 ENSMUST00000166294.9 |
||
| CDS-3UTR CCA 90 bp | TTCTCTCCTTTCCATTTAATGACCGTGAGCACCGTCTTAGCCCGCTTCAGCTCTGCTTCTTTCCATCAATaGTCCACCAGACCTCATTGT | + |
|
Preference number: 4 (lower is better) Translates to: FSPFHLMTVSTVLARFSSASFHQ*STRPHC Trigger: ACAATGAGGTCTGGTGGACCATTGATGGAAAGAAGC...AGAGCTGAAGCGGGCTAAGACGGTGCTCACGGTCATTAAATGGAAAGGAGAGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174171.2 |
||
| CDS-3UTR CCA 90 bp | CTGCAGAAAGACCCTACTTGTCTGAAGCTGCTCTTTGTCCTTGGTGTTCAATCAGTGGCAATGGAGTTCTaGCACATGACACCCAGCTTA | + |
|
Preference number: 4 (lower is better) Translates to: LQKDPTCLKLLFVLGVQSVAMEF*HMTPSL Trigger: TAAGCTGGGTGTCATGTGCCAGAACTCCATTGCCAC...TGATTGAACACCAAGGACAAAGAGCAGCTTCAGACAAGTAGGGTCTTTCTGCAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000096129.9 ENSMUST00000166294.9 |
||
| CDS-3UTR CCA 90 bp | TTTATTTTGGTGCTTAGAATTAGGAAAATAGGGCTTGATTGTCCTCGGGATCTTGTTTCCCTCGGTGCTTaGACATCGTGCCCGGGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: FILVLRIRKIGLDCPRDLVSLGA*TSCPGL Trigger: CAGCCCCGGGCACGATGTCCAAGCACCGAGGGAAAC...AAGATCCCGAGGACAATCAAGCCCTATTTTCCTAATTCTAAGCACCAAAATAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000173136.2 |
||
| CDS-3UTR TCA 90 bp | CTATTTACAGGGGGCAATGGGAAGCAGGGATTCCTATGGAAAGATTTGGTCCCTAAACAGCTGTCCTTCTaGACAACTTCCAGGGGAAAT | + |
|
Preference number: 4 (lower is better) Translates to: LFTGGNGKQGFLWKDLVPKQLSF*TTSRGN Trigger: ATTTCCCCTGGAAGTTGTTCAGAAGGACAGCTGTTT...AGGGACCAAATCTTTCCATAGGAATCCCTGCTTCCCATTGCCCCCTGTAAATAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000096129.9 ENSMUST00000166294.9 |
||
| CDS-3UTR TCA 90 bp | TTCTTCAAGCAACATTTAGAAACAAAGGCGTTGACAACATCGGAACCAGCATACCAGTCACAGTCCTGGTaGGGTGAAAGAGACGTCCGT | + |
|
Preference number: 4 (lower is better) Translates to: FFKQHLETKALTTSEPAYQSQSW*GERDVR Trigger: ACGGACGTCTCTTTCACCTCACCAGGACTGTGACTG...GTATGCTGGTTCCGATGTTGTCAACGCCTTTGTTTCTAAATGTTGCTTGAAGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174202.8 |
||
| CDS-3UTR TCA 90 bp | ATGGAAAGATTTGGTCCCTGGGGACACAAATGTGCTGGCGGTTTGCTGTTGAGCTTGATGCTCAAAATCTaGGTCCTTGTTTCATCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: MERFGPWGHKCAGGLLLSLMLKI*VLVSSS Trigger: GGAAGATGAAACAAGGACTCAGATTTTGAGCATCAA...GCTCAACAGCAAACCGCCAGCACATTTGTGTCCCCAGGGACCAAATCTTTCCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000096129.9 ENSMUST00000166294.9 |
||
| CDS-3UTR TCA 90 bp | GACCCTACTTGTCTGAAGCTGCTCTTTGTCCTTGGTGTTCAATCAAGCCTATGGTGTACCTTGGTGGTATaGCTTTCTGTTTCACCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: DPTCLKLLFVLGVQSSLWCTLVV*LSVSPW Trigger: CCAAGGTGAAACAGAAAGTCATACCACCAAGGTACA...CCATAGGCTTGATTGAACACCAAGGACAAAGAGCAGCTTCAGACAAGTAGGGTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000096129.9 ENSMUST00000166294.9 |
||
| CDS-3UTR TCA 90 bp | GTCTACCAGAACCTGCTCCCTTTCAAGTCACTCCTTGGGATAGACACATCCTGTATCCTTCGGCTCCTCTaGATGAAATCAAAAACTGCT | + |
|
Preference number: 4 (lower is better) Translates to: VYQNLLPFKSLLGIDTSCILRLL*MKSKTA Trigger: AGCAGTTTTTGATTTCATTCAGAGGAGCCGAAGGAT...ACAGGATGTGTCTATCCCAAGGAGTGACTTGAAAGGGAGCAGGTTCTGGTAGAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000096129.9 ENSMUST00000166294.9 |
||
| CDS-3UTR TCA 90 bp | TGCAAGCTACACATTTCACATGGCAAGGACACAAAACTGCAAGCCCCTAAGCTGAGACTGATGTCAGACTaGGAAGAACAGCTCTCATTC | + |
|
Preference number: 4 (lower is better) Translates to: CKLHISHGKDTKLQAPKLRLMSD*EEQLSF Trigger: GAATGAGAGCTGTTCTTCTCAGTCTGACATCAGTCT...CAGCTTAGGGGCTTGCAGTTTTGTGTCCTTGCCATGTGAAATGTGTAGCTTGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000173136.2 |
||
| CDS-3UTR GCA 90 bp | AGTTCTCATTATCATAAATACAAGTGTGTGTCCCCCTCTCTCTGCTGTTCTATTTCCAGGTCCCGGTCTTaGCTGGTCCAGTACCAGATC | + |
|
Preference number: 4 (lower is better) Translates to: SSHYHKYKCVSPSLCCSISRSRS*LVQYQI Trigger: GATCTGGTACTGGACCAGGCAAGACCGGGACCTGGA...AATAGAACAGCAGAGAGAGGGGGACACACACTTGTATTTATGATAATGAGAACT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023156.13 |
||
| CDS-3UTR GCA 90 bp | ATGGAAAGATTTGGTCCCTGGGGACACAAATGTGCTGGCGGTTTGCTGTTGAGCAATGAAATCAAAAACTaGTTCCACGGTATTTCCCCC | + |
|
Preference number: 4 (lower is better) Translates to: MERFGPWGHKCAGGLLLSNEIKN*FHGISP Trigger: GGGGGAAATACCGTGGAAGCAGTTTTTGATTTCATT...GCTCAACAGCAAACCGCCAGCACATTTGTGTCCCCAGGGACCAAATCTTTCCAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000096129.9 ENSMUST00000166294.9 |
||
| CDS-3UTR GCA 90 bp | GACCAACACTATTATGAAGGCCAGATGTTTTCAGCTTGGAGAAGGAATATACATATGCCTGGATGGGGTTaGTCAAGCGGACGGTACTCC | + |
|
Preference number: 4 (lower is better) Translates to: DQHYYEGQMFSAWRRNIHMPGWG*SSGRYS Trigger: GGAGTACCGTCCGCTTGAGCAACCCCATCCAGGCAT...ATGTATATTCCTTCTCCAAGCTGAAAACATCTGGCCTTCATAATAGTGTTGGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000096129.9 |
||
| CDS-3UTR CCA 90 bp | AAGCTGCTCTTTGTCCTTGGTGTTCAATCAAGCCTATGGGTGTTAGACTTGCATACTGATGCGATTCTCTaGGAGGCGGAAGTTAATGGG | + |
|
Preference number: 4 (lower is better) Translates to: KLLFVLGVQSSLWVLDLHTDAIL*EAEVNG Trigger: CCCATTAACTTCCGCCTCCCAGAGAATCGCATCAGT...ATGCAAGTCTAACACCCATAGGCTTGATTGAACACCAAGGACAAAGAGCAGCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000096129.9 ENSMUST00000166294.9 |
||
| CDS-3UTR CCA 90 bp | TACTTGTCTGAAGCTGCTCTTTGTCCTTGGTGTTCAATCAAGCCTATGGGTGTTACTGATGCGATTCTCTaGGAGGCGGAAGTTAATGGG | + |
|
Preference number: 4 (lower is better) Translates to: YLSEAALCPWCSIKPMGVTDAIL*EAEVNG Trigger: CCCATTAACTTCCGCCTCCCAGAGAATCGCATCAGT...AACACCCATAGGCTTGATTGAACACCAAGGACAAAGAGCAGCTTCAGACAAGTA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000096129.9 ENSMUST00000166294.9 |
||
| CDS-3UTR CCA 90 bp | GGAGGTGATATAATAGTGGCTGGGATGAATACAGACTCCAACCGTGCAGAAACTGACAACACGGTCATTTaGAGAATAGATCTGGGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: GGDIIVAGMNTDSNRAETDNTVI*RIDLGW Trigger: CCACCCCAGATCTATTCTCCAAATGACCGTGTTGTC...AGTTTCTGCACGGTTGGAGTCTGTATTCATCCCAGCCACTATTATATCACCTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023156.13 |
||
| CDS-3UTR CCA 90 bp | CTGCAGAAAGACCCTACTTGTCTGAAGCTGCTCTTTGTCCTTGGTGTTCAATCAGACAACACGGTCATTTaGAGAATAGATCTGGGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: LQKDPTCLKLLFVLGVQSDNTVI*RIDLGW Trigger: CCACCCCAGATCTATTCTCCAAATGACCGTGTTGTC...TGATTGAACACCAAGGACAAAGAGCAGCTTCAGACAAGTAGGGTCTTTCTGCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000096129.9 ENSMUST00000166294.9 |
||
| 3UTR CAA 72 bp | CCATATGTTCTTACTTGCGTTGTCCTCAGGTCACAGTaGCCTGAGGCACTTGGACCCCTATTTCAGCATATA | + |
|
Preference number: 4 (lower is better) Translates to: PYVLTCVVLRSQ*PEALGPLFQHI Trigger: TATATGCTGAAATAGGGGTCCAAGTGCCTCAGGCAACTGTGACCTGAGGACAACGCAAGTAAGAACATATGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096129.9 |
||
| CDS-3UTR TCA 90 bp | AACCAGCATACTGATCATTATCACAAAGATGGAAGCTTTCTCTTAGGATTTTTCAATTGCCCGTGTCATTaGGGAGGGTGGGCCGGAACC | + |
|
Preference number: 4 (lower is better) Translates to: NQHTDHYHKDGSFLLGFFNCPCH*GGWAGT Trigger: GGTTCCGGCCCACCCTCCTCAATGACACGGGCAATT...GAAAAATCCTAAGAGAAAGCTTCCATCTTTGTGATAATGATCAGTATGCTGGTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000174202.8 |
||
| CDS-3UTR TCA 90 bp | CTTGGGATAGACACATCCTGTGAGTGTCAAAGCCCTGGTCTTTTGGGTGCAAAATTGAAACCAAGGGGATaGAAAAGCTCAAGTTCATGC | + |
|
Preference number: 4 (lower is better) Translates to: LGIDTSCECQSPGLLGAKLKPRG*KSSSSC Trigger: GCATGAACTTGAGCTTTTTCATCCCCTTGGTTTCAA...TTTTGCACCCAAAAGACCAGGGCTTTGACACTCACAGGATGTGTCTATCCCAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000096129.9 ENSMUST00000166294.9 |
||
| CDS-3UTR TCA 90 bp | TTGTGTCCGATGTGGGTGCAGAAATTCTCTCCTTTATTTCCTATTCACCACTGTACAGTCCTGGTGAGGTaGAAGAGACGTCCGTTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: LCPMWVQKFSPLFPIHHCTVLVR*KRRPFS Trigger: TGAAAACGGACGTCTCTTTCACCTCACCAGGACTGT...ACAGTGGTGAATAGGAAATAAAGGAGAGAATTTCTGCACCCACATCGGACACAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174202.8 |
||
| CDS-3UTR TCA 90 bp | GGTAAGAACTTTGACAACTATATACAGAGAGCCAGGAATTCACAAATGGAACAGCAGTCACAGTCCTGGTaGGGTGAAAGAGACGTCCGT | + |
|
Preference number: 4 (lower is better) Translates to: GKNFDNYIQRARNSQMEQQSQSW*GERDVR Trigger: ACGGACGTCTCTTTCACCTCACCAGGACTGTGACTG...CTGTTCCATTTGTGAATTCCTGGCTCTCTGTATATAGTTGTCAAAGTTCTTACC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023156.13 |
||
| CDS-3UTR TCA 90 bp | CATATTAATTTAGGGGAGGTAAGAACTTTGACAACTATATACAGAGAGCCAGGATTTCTAGGCCAGCCTTaGGCTCCAGGAGGGCTTGTG | + |
|
Preference number: 4 (lower is better) Translates to: HINLGEVRTLTTIYREPGFLGQP*APGGLV Trigger: CACAAGCCCTCCTGGAGCTCAAGGCTGGCCTAGAAA...TCCTGGCTCTCTGTATATAGTTGTCAAAGTTCTTACCTCCCCTAAATTAATATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023156.13 |
||
| CDS-3UTR TCA 90 bp | AAGTACTCTTTACTGGCCCACATCACAAGGAGACACCAGTTCCTAGCTACCTTTAGACTGATGTCAGACTaGGAAGAACAGCTCTCATTC | + |
|
Preference number: 4 (lower is better) Translates to: KYSLLAHITRRHQFLATFRLMSD*EEQLSF Trigger: GAATGAGAGCTGTTCTTCTCAGTCTGACATCAGTCT...AAAGGTAGCTAGGAACTGGTGTCTCCTTGTGATGTGGGCCAGTAAAGAGTACTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000096129.9 ENSMUST00000166294.9 |
||
| CDS-3UTR GCA 90 bp | GTCTACCAGAACCTGCTCCCTTTCAAGTCACTCCTTGGGATAGACACATCCTGTGAAATGCAACTTTGCTaGAGTAAGTTGTGTTCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: VYQNLLPFKSLLGIDTSCEMQLC*SKLCSS Trigger: TGAGGAACACAACTTACTGCAGCAAAGTTGCATTTC...ACAGGATGTGTCTATCCCAAGGAGTGACTTGAAAGGGAGCAGGTTCTGGTAGAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000096129.9 ENSMUST00000166294.9 |
||
| CDS-3UTR GCA 90 bp | ATGGAAGCTAGAGTTTTATCAGACTATGATGTGAGAGCACATCAAATGTGTGGGTTCACCTTGGCAGCCTaGTCAGCTTCCCCTTTGGTA | + |
|
Preference number: 4 (lower is better) Translates to: MEARVLSDYDVRAHQMCGFTLAA*SASPLV Trigger: TACCAAAGGGGAAGCTGAGCAGGCTGCCAAGGTGAA...CCCACACATTTGATGTGCTCTCACATCATAGTCTGATAAAACTCTAGCTTCCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000174202.8 |
||
| CDS-3UTR GCA 90 bp | TTACTGGCCCACATCACAAGGAGACACCAGTTCCTAGCTACCTTTGAATCCCTTTGTCTCTGTCGAAGATaGACAGCTTGTATCCAAACT | + |
|
Preference number: 4 (lower is better) Translates to: LLAHITRRHQFLATFESLCLCRR*TACIQT Trigger: AGTTTGGATACAAGCTGTGCATCTTCGACAGAGACA...AAGGGATTCAAAGGTAGCTAGGAACTGGTGTCTCCTTGTGATGTGGGCCAGTAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000096129.9 ENSMUST00000166294.9 |
||
| CDS-3UTR CCA 90 bp | CTGCAGAAAGACCCTACTTGTCTGAAGCTGCTCTTTGTCCTTGGTGTTCAATCACTTGGATTTGTCGCATaGTATCTAGTCCCCAGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: LQKDPTCLKLLFVLGVQSLGFVA*YLVPSH Trigger: ATGACTGGGGACTAGATACCATGCGACAAATCCAAG...TGATTGAACACCAAGGACAAAGAGCAGCTTCAGACAAGTAGGGTCTTTCTGCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000096129.9 ENSMUST00000166294.9 |
||
| CDS-3UTR CCA 90 bp | GGAAGGAATCAATTGGTTGGGATATGTGTTAGGGGCAAGACTCAGAGAGAAATTACTGATGCGATTCTCTaGGAGGCGGAAGTTAATGGG | + |
|
Preference number: 4 (lower is better) Translates to: GRNQLVGICVRGKTQREITDAIL*EAEVNG Trigger: CCCATTAACTTCCGCCTCCCAGAGAATCGCATCAGT...AATTTCTCTCTGAGTCTTGCCCCTAACACATATCCCAACCAATTGATTCCTTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174202.8 |
||
| CDS-3UTR CCA 90 bp | TCTGTCTACCAGAACCTGCTCCCTTTCAAGTCACTCCTTGGGATAGACACATCCATACATCTTGTGCACTaGGAATCTCATGGCAGAATT | + |
|
Preference number: 4 (lower is better) Translates to: SVYQNLLPFKSLLGIDTSIHLVH*ESHGRI Trigger: AATTCTGCCATGAGATTCCCAGTGCACAAGATGTAT...GGATGTGTCTATCCCAAGGAGTGACTTGAAAGGGAGCAGGTTCTGGTAGACAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000096129.9 ENSMUST00000166294.9 |
||
| CDS-3UTR CCA 90 bp | ACCGTCTTAGCCCGCTTCAGCTCTTTCACCTTCATGTCCTTCACAGCTTTGTACATACATCTTGTGCACTaGGAATCTCATGGCAGAATT | + |
|
Preference number: 4 (lower is better) Translates to: TVLARFSSFTFMSFTALYIHLVH*ESHGRI Trigger: AATTCTGCCATGAGATTCCCAGTGCACAAGATGTAT...GTACAAAGCTGTGAAGGACATGAAGGTGAAAGAGCTGAAGCGGGCTAAGACGGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174171.2 |
||
| CDS-3UTR CCA 90 bp | TTTCCATTTAATGACCGTGAGCACCGTCTTAGCCCGCTTCAGCTCTTTCACCTTAACCAGTTCCTCTCCTaGTTCTTTCTCATAGACAAC | + |
|
Preference number: 4 (lower is better) Translates to: FPFNDREHRLSPLQLFHLNQFLS*FFLIDN Trigger: GTTGTCTATGAGAAAGAACCAGGAGAGGAACTGGTT...AAGGTGAAAGAGCTGAAGCGGGCTAAGACGGTGCTCACGGTCATTAAATGGAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174171.2 |
||
| CDS-3UTR CCA 90 bp | AGTTCTCATTATCATAAATACAAGTGTGTGTCCCCCTCTCTCTGCTGTTCTATTGGGACTCTTCTTCACTaGCATGGCCACCTGCAACTG | + |
|
Preference number: 4 (lower is better) Translates to: SSHYHKYKCVSPSLCCSIGTLLH*HGHLQL Trigger: CAGTTGCAGGTGGCCATGCCAGTGAAGAAGAGTCCC...AATAGAACAGCAGAGAGAGGGGGACACACACTTGTATTTATGATAATGAGAACT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023156.13 |
||
| CDS-3UTR TCA 90 bp | AAATTGGGACACAAACTTACCAGGATCAAGGAAGAGCTGGTTAAAGAAAATGGCCATCTTTCTCCTTACTaGTGCGATTCTCTGGGAGGC | + |
|
Preference number: 4 (lower is better) Translates to: KLGHKLTRIKEELVKENGHLSPY*CDSLGG Trigger: GCCTCCCAGAGAATCGCATCAGTAAGGAGAAAGATG...GCCATTTTCTTTAACCAGCTCTTCCTTGATCCTGGTAAGTTTGTGTCCCAATTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096129.9 |
||
| CDS-3UTR TCA 90 bp | AGTGTTTTGTGTCCGATGTGGGTGCAGAAATTCTCTCCTTTATTTCCTATTCACCATCTTTCTCCTTACTaGTGCGATTCTCTGGGAGGC | + |
|
Preference number: 4 (lower is better) Translates to: SVLCPMWVQKFSPLFPIHHLSPY*CDSLGG Trigger: GCCTCCCAGAGAATCGCATCAGTAAGGAGAAAGATG...GTGAATAGGAAATAAAGGAGAGAATTTCTGCACCCACATCGGACACAAAACACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174202.8 |
||
| CDS-3UTR TCA 90 bp | TGCCCTGAGAGCGCTTTTGCATTTTCTCACTCTCCATTAGCACCATTAAAGCTTAAACAGCTGTCCTTCTaGACAACTTCCAGGGGAAAT | + |
|
Preference number: 4 (lower is better) Translates to: CPESAFAFSHSPLAPLKLKQLSF*TTSRGN Trigger: ATTTCCCCTGGAAGTTGTTCAGAAGGACAGCTGTTT...AAGCTTTAATGGTGCTAATGGAGAGTGAGAAAATGCAAAAGCGCTCTCAGGGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000023156.13 |
||
| CDS-3UTR TCA 90 bp | TCTGTCTACCAGAACCTGCTCCCTTTCAAGTCACTCCTTGGGATAGACACATCCCTACATTTGGACATGTaGTCTTATGAATGCCATGTT | + |
|
Preference number: 4 (lower is better) Translates to: SVYQNLLPFKSLLGIDTSLHLDM*SYECHV Trigger: AACATGGCATTCATAAGATCACATGTCCAAATGTAG...GGATGTGTCTATCCCAAGGAGTGACTTGAAAGGGAGCAGGTTCTGGTAGACAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000096129.9 ENSMUST00000166294.9 |
||
| CDS-3UTR TCA 90 bp | AGTGGGAGTTCTAGTCAAACAGATGAAATGAAGGCTTTCCATGCATGTCTTAACCAATGCATCCTTTGGTaGGCCCACCACCTTTACAGT | + |
|
Preference number: 4 (lower is better) Translates to: SGSSSQTDEMKAFHACLNQCILW*AHHLYS Trigger: ACTGTAAAGGTGGTGGGCTCACCAAAGGATGCATTG...GTTAAGACATGCATGGAAAGCCTTCATTTCATCTGTTTGACTAGAACTCCCACT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096129.9 |
||
| CDS-3UTR TCA 90 bp | CTATTTACAGGGGGCAATGGGAAGCAGGGATTCCTATGGAAAGATTTGGTCCCTTTGATGCTCAAAATCTaGGTCCTTGTTTCATCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: LFTGGNGKQGFLWKDLVPLMLKI*VLVSSS Trigger: GGAAGATGAAACAAGGACTCAGATTTTGAGCATCAA...AGGGACCAAATCTTTCCATAGGAATCCCTGCTTCCCATTGCCCCCTGTAAATAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000096129.9 ENSMUST00000166294.9 |
||
| CDS-3UTR TCA 90 bp | TACTTGTCTGAAGCTGCTCTTTGTCCTTGGTGTTCAATCAAGCCTATGGGTGTTTGTACCTTGGTGGTATaGCTTTCTGTTTCACCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: YLSEAALCPWCSIKPMGVCTLVV*LSVSPW Trigger: CCAAGGTGAAACAGAAAGTCATACCACCAAGGTACA...AACACCCATAGGCTTGATTGAACACCAAGGACAAAGAGCAGCTTCAGACAAGTA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000096129.9 ENSMUST00000166294.9 |
||
| CDS-3UTR TCA 90 bp | CTGCAGAAAGACCCTACTTGTCTGAAGCTGCTCTTTGTCCTTGGTGTTCAATCACCATTTTGTATCCACTaGCTTTCAGACTCTTGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: LQKDPTCLKLLFVLGVQSPFCIH*LSDSWR Trigger: TCTCCAAGAGTCTGAAAGTCAGTGGATACAAAATGG...TGATTGAACACCAAGGACAAAGAGCAGCTTCAGACAAGTAGGGTCTTTCTGCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096129.9 |
||
| CDS-3UTR TCA 90 bp | CGTCTTAGCCCGCTTCAGCTCTTTCACCTTCATGTCCTTCACAGCTTTGTACTGTGTACCTTGGTGGTATaGCTTTCATTAATAGTGATG | + |
|
Preference number: 4 (lower is better) Translates to: RLSPLQLFHLHVLHSFVLCTLVV*LSLIVM Trigger: CATCACTATTAATGAAAGTCATACCACCAAGGTACA...CAGTACAAAGCTGTGAAGGACATGAAGGTGAAAGAGCTGAAGCGGGCTAAGACG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174171.2 |
||
| CDS-3UTR GCA 90 bp | CTTGGGATAGACACATCCTGTGAGTGTCAAAGCCCTGGTCTTTTGGGTGCAAAAGAAATGCAACTTTGCTaGAGTAAGTTGTGTTCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: LGIDTSCECQSPGLLGAKEMQLC*SKLCSS Trigger: TGAGGAACACAACTTACTGCAGCAAAGTTGCATTTC...TTTTGCACCCAAAAGACCAGGGCTTTGACACTCACAGGATGTGTCTATCCCAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000096129.9 ENSMUST00000166294.9 |
||
| CDS-3UTR GCA 90 bp | AAGTACTCTTTACTGGCCCACATCACAAGGAGACACCAGTTCCTAGCTACCTTTAACTTCCAGGGGAAATaGAACTTTGCTGCAGTAAGT | + |
|
Preference number: 4 (lower is better) Translates to: KYSLLAHITRRHQFLATFNFQGK*NFAAVS Trigger: ACTTACTGCAGCAAAGTTGCATTTCCCCTGGAAGTT...AAAGGTAGCTAGGAACTGGTGTCTCCTTGTGATGTGGGCCAGTAAAGAGTACTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000096129.9 ENSMUST00000166294.9 |
||
| CDS-3UTR GCA 90 bp | TTACTGGCCCACATCACAAGGAGACACCAGTTCCTAGCTACCTTTGAATCCCTTAAAAGCTCAAGTTCATaGCCTCGGGTAGTACATTAT | + |
|
Preference number: 4 (lower is better) Translates to: LLAHITRRHQFLATFESLKSSSS*PRVVHY Trigger: ATAATGTACTACCCGAGGGCATGAACTTGAGCTTTT...AAGGGATTCAAAGGTAGCTAGGAACTGGTGTCTCCTTGTGATGTGGGCCAGTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000096129.9 ENSMUST00000166294.9 |
||
| CDS-3UTR GCA 90 bp | CTGCAGAAAGACCCTACTTGTCTGAAGCTGCTCTTTGTCCTTGGTGTTCAATCATGTCTCTGTCGAAGATaGACAGCTTGTATCCAAACT | + |
|
Preference number: 4 (lower is better) Translates to: LQKDPTCLKLLFVLGVQSCLCRR*TACIQT Trigger: AGTTTGGATACAAGCTGTGCATCTTCGACAGAGACA...TGATTGAACACCAAGGACAAAGAGCAGCTTCAGACAAGTAGGGTCTTTCTGCAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000096129.9 ENSMUST00000166294.9 |
||
| CDS-3UTR GCA 90 bp | GACCCTACTTGTCTGAAGCTGCTCTTTGTCCTTGGTGTTCAATCAAGCCTATGGAATGAAATCAAAAACTaGTTCCACGGTATTTCCCCC | + |
|
Preference number: 4 (lower is better) Translates to: DPTCLKLLFVLGVQSSLWNEIKN*FHGISP Trigger: GGGGGAAATACCGTGGAAGCAGTTTTTGATTTCATT...CCATAGGCTTGATTGAACACCAAGGACAAAGAGCAGCTTCAGACAAGTAGGGTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000096129.9 ENSMUST00000166294.9 |
||
| CDS-3UTR CCA 90 bp | CCAATGACAAAAAGCATACTATTTACAGGGGGCAATGGGAAGCAGGGATTCCTACTTGGATTTGTCGCATaGTATCTAGTCCCCAGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: PMTKSILFTGGNGKQGFLLGFVA*YLVPSH Trigger: ATGACTGGGGACTAGATACCATGCGACAAATCCAAG...TAGGAATCCCTGCTTCCCATTGCCCCCTGTAAATAGTATGCTTTTTGTCATTGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000096129.9 ENSMUST00000166294.9 |
||
| CDS-3UTR CCA 90 bp | CTCTCCTTTCCATTTAATGACCGTGAGCACCGTCTTAGCCCGCTTCAGCTCTTTTCATCTTCAAACACTTaGATTTGTCGCATGGTATCT | + |
|
Preference number: 4 (lower is better) Translates to: LSFPFNDREHRLSPLQLFSSSNT*ICRMVS Trigger: AGATACCATGCGACAAATCCAAGTGTTTGAAGATGA...AAAGAGCTGAAGCGGGCTAAGACGGTGCTCACGGTCATTAAATGGAAAGGAGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174171.2 |
||
| CDS-3UTR CCA 90 bp | TTGTTCCCCCTTTCTCTCACCTTCTGGCCCTTGGAGGAATTTGAACTCAACATCATACATCTTGTGCACTaGGAATCTCATGGCAGAATT | + |
|
Preference number: 4 (lower is better) Translates to: LFPLSLTFWPLEEFELNIIHLVH*ESHGRI Trigger: AATTCTGCCATGAGATTCCCAGTGCACAAGATGTAT...GATGTTGAGTTCAAATTCCTCCAAGGGCCAGAAGGTGAGAGAAAGGGGGAACAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000096129.9 ENSMUST00000166294.9 |
||
| CDS-3UTR CCA 90 bp | GGAGGTGATATAATAGTGGCTGGGATGAATACAGACTCCAACCGTGCAGAAACTATACCAAGTGACCGATaGTTTGACACTGGAAGGAAA | + |
|
Preference number: 4 (lower is better) Translates to: GGDIIVAGMNTDSNRAETIPSDR*FDTGRK Trigger: TTTCCTTCCAGTGTCAAACCATCGGTCACTTGGTAT...AGTTTCTGCACGGTTGGAGTCTGTATTCATCCCAGCCACTATTATATCACCTCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023156.13 |
||
| CDS-3UTR CCA 90 bp | AAGTACTCTTTACTGGCCCACATCACAAGGAGACACCAGTTCCTAGCTACCTTTATACCAAGTGACCGATaGTTTGACACTGGAAGGAAA | + |
|
Preference number: 4 (lower is better) Translates to: KYSLLAHITRRHQFLATFIPSDR*FDTGRK Trigger: TTTCCTTCCAGTGTCAAACCATCGGTCACTTGGTAT...AAAGGTAGCTAGGAACTGGTGTCTCCTTGTGATGTGGGCCAGTAAAGAGTACTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000096129.9 ENSMUST00000166294.9 |
||
| CDS-3UTR CCA 90 bp | TACTTGTCTGAAGCTGCTCTTTGTCCTTGGTGTTCAATCAAGCCTATGGGTGTTGCTTCTTTCCATCAATaGTCCACCAGACCTCATTGT | + |
|
Preference number: 4 (lower is better) Translates to: YLSEAALCPWCSIKPMGVASFHQ*STRPHC Trigger: ACAATGAGGTCTGGTGGACCATTGATGGAAAGAAGC...AACACCCATAGGCTTGATTGAACACCAAGGACAAAGAGCAGCTTCAGACAAGTA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000096129.9 ENSMUST00000166294.9 |
||
| CDS-3UTR CCA 90 bp | GACAAAAAGCATACTATTTACAGGGGGCAATGGGAAGCAGGGATTCCTATGGAAGCTTCTTTCCATCAATaGTCCACCAGACCTCATTGT | + |
|
Preference number: 4 (lower is better) Translates to: DKKHTIYRGQWEAGIPMEASFHQ*STRPHC Trigger: ACAATGAGGTCTGGTGGACCATTGATGGAAAGAAGC...TTCCATAGGAATCCCTGCTTCCCATTGCCCCCTGTAAATAGTATGCTTTTTGTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000096129.9 ENSMUST00000166294.9 |
||
| CDS-3UTR CCA 90 bp | ATTATCATAAATACAAGTGTGTGTCCCCCTCTCTCTGCTGTTCTATTTGAAGCACCTGGAGCACGTAGTTaGGACTTAGGACAACCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: IIINTSVCPPLSAVLFEAPGARS*DLGQPG Trigger: TCCTGGTTGTCCTAAGTCCCAACTACGTGCTCCAGG...TGCTTCAAATAGAACAGCAGAGAGAGGGGGACACACACTTGTATTTATGATAAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023156.13 |
||
| CDS-3UTR CCA 90 bp | CCTGGGTGCAGAAGTTCTCATTATCATAAATACAAGTGTGTGTCCCCCTCTCTCTGCCCTGAGGATACTTaGATTTCTCTCCTTTCCATT | + |
|
Preference number: 4 (lower is better) Translates to: PGCRSSHYHKYKCVSPSLCPEDT*ISLLSI Trigger: AATGGAAAGGAGAGAAATCCAAGTATCCTCAGGGCA...GAGAGAGGGGGACACACACTTGTATTTATGATAATGAGAACTTCTGCACCCAGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023156.13 |
||
| CDS-3UTR CCA 90 bp | AAGCATACTATTTACAGGGGGCAATGGGAAGCAGGGATTCCTATGGAAAGATTTTGGAGCCAGAATGTTTaGACTTTTCTCCCTTCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: KHTIYRGQWEAGIPMERFWSQNV*TFLPSS Trigger: GCTGGAAGGGAGAAAAGTCCAAACATTCTGGCTCCA...AAATCTTTCCATAGGAATCCCTGCTTCCCATTGCCCCCTGTAAATAGTATGCTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000096129.9 ENSMUST00000166294.9 |
||
| CDS-3UTR TCA 90 bp | TGTAACTTTCCTAGAGTAAGCAGGCAACATATGGAACTGAAAGAGGAGACAGGAAAACAGCTGTCCTTCTaGACAACTTCCAGGGGAAAT | + |
|
Preference number: 4 (lower is better) Translates to: CNFPRVSRQHMELKEETGKQLSF*TTSRGN Trigger: ATTTCCCCTGGAAGTTGTTCAGAAGGACAGCTGTTT...TCCTGTCTCCTCTTTCAGTTCCATATGTTGCCTGCTTACTCTAGGAAAGTTACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000096129.9 |
||
| CDS-3UTR TCA 90 bp | AGAGAGTTAGGCTGCATGGAAGCTAGAGTTTTATCAGACTATGATGTGAGAGCAAAACAGCTGTCCTTCTaGACAACTTCCAGGGGAAAT | + |
|
Preference number: 4 (lower is better) Translates to: RELGCMEARVLSDYDVRAKQLSF*TTSRGN Trigger: ATTTCCCCTGGAAGTTGTTCAGAAGGACAGCTGTTT...TGCTCTCACATCATAGTCTGATAAAACTCTAGCTTCCATGCAGCCTAACTCTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000174202.8 |
||
| CDS-3UTR TCA 90 bp | CTATTTACAGGGGGCAATGGGAAGCAGGGATTCCTATGGAAAGATTTGGTCCCTCTACATTTGGACATGTaGTCTTATGAATGCCATGTT | + |
|
Preference number: 4 (lower is better) Translates to: LFTGGNGKQGFLWKDLVPLHLDM*SYECHV Trigger: AACATGGCATTCATAAGATCACATGTCCAAATGTAG...AGGGACCAAATCTTTCCATAGGAATCCCTGCTTCCCATTGCCCCCTGTAAATAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000096129.9 ENSMUST00000166294.9 |
||
| CDS-3UTR TCA 90 bp | TGCCCTGAGAGCGCTTTTGCATTTTCTCACTCTCCATTAGCACCATTAAAGCTTTTGAAACCAAGGGGATaGAAAAGCTCAAGTTCATGC | + |
|
Preference number: 4 (lower is better) Translates to: CPESAFAFSHSPLAPLKLLKPRG*KSSSSC Trigger: GCATGAACTTGAGCTTTTTCATCCCCTTGGTTTCAA...AAGCTTTAATGGTGCTAATGGAGAGTGAGAAAATGCAAAAGCGCTCTCAGGGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt. Matches the following 1 transcripts: ENSMUST00000023156.13 |
||
| CDS-3UTR TCA 90 bp | GACAAAAAGCATACTATTTACAGGGGGCAATGGGAAGCAGGGATTCCTATGGAATTGAAACCAAGGGGATaGAAAAGCTCAAGTTCATGC | + |
|
Preference number: 4 (lower is better) Translates to: DKKHTIYRGQWEAGIPMELKPRG*KSSSSC Trigger: GCATGAACTTGAGCTTTTTCATCCCCTTGGTTTCAA...TTCCATAGGAATCCCTGCTTCCCATTGCCCCCTGTAAATAGTATGCTTTTTGTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000096129.9 ENSMUST00000166294.9 |
||
| CDS-3UTR TCA 90 bp | ATTATCATAAATACAAGTGTGTGTCCCCCTCTCTCTGCTGTTCTATTTGAAGCAACAGTCCTGGTGAGGTaGAAGAGACGTCCGTTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: IIINTSVCPPLSAVLFEATVLVR*KRRPFS Trigger: TGAAAACGGACGTCTCTTTCACCTCACCAGGACTGT...TGCTTCAAATAGAACAGCAGAGAGAGGGGGACACACACTTGTATTTATGATAAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023156.13 |
||
| CDS-3UTR TCA 90 bp | CCTGGGTGCAGAAGTTCTCATTATCATAAATACAAGTGTGTGTCCCCCTCTCTCTTGATGCTCAAAATCTaGGTCCTTGTTTCATCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: PGCRSSHYHKYKCVSPSLLMLKI*VLVSSS Trigger: GGAAGATGAAACAAGGACTCAGATTTTGAGCATCAA...GAGAGAGGGGGACACACACTTGTATTTATGATAATGAGAACTTCTGCACCCAGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023156.13 |
||
| CDS-3UTR TCA 90 bp | CCAATGACAAAAAGCATACTATTTACAGGGGGCAATGGGAAGCAGGGATTCCTATTCGGCTCCTCTGAATaGAATCAAAAACTGCTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: PMTKSILFTGGNGKQGFLFGSSE*NQKLLP Trigger: TGGAAGCAGTTTTTGATTTCATTCAGAGGAGCCGAA...TAGGAATCCCTGCTTCCCATTGCCCCCTGTAAATAGTATGCTTTTTGTCATTGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 2 transcripts: ENSMUST00000096129.9 ENSMUST00000166294.9 |
||
| CDS-3UTR GCA 90 bp | TGCCCTGAGAGCGCTTTTGCATTTTCTCACTCTCCATTAGCACCATTAAAGCTTAACTTCCAGGGGAAATaGAACTTTGCTGCAGTAAGT | + |
|
Preference number: 4 (lower is better) Translates to: CPESAFAFSHSPLAPLKLNFQGK*NFAAVS Trigger: ACTTACTGCAGCAAAGTTGCATTTCCCCTGGAAGTT...AAGCTTTAATGGTGCTAATGGAGAGTGAGAAAATGCAAAAGCGCTCTCAGGGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000023156.13 |
||
| CDS-3UTR GCA 90 bp | TGCCCTGAGAGCGCTTTTGCATTTTCTCACTCTCCATTAGCACCATTAAAGCTTTGTCTCTGTCGAAGATaGACAGCTTGTATCCAAACT | + |
|
Preference number: 4 (lower is better) Translates to: CPESAFAFSHSPLAPLKLCLCRR*TACIQT Trigger: AGTTTGGATACAAGCTGTGCATCTTCGACAGAGACA...AAGCTTTAATGGTGCTAATGGAGAGTGAGAAAATGCAAAAGCGCTCTCAGGGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023156.13 |
||
| CDS-3UTR GCA 90 bp | AAGAAACAAAGTCCTTCTTTGTTCAACACTACAGCCTGTTCTCATGTCTTAAGAACAGACTCCTTCAGCTaGATGATGCCTGGATGGGGT | + |
|
Preference number: 4 (lower is better) Translates to: KKQSPSLFNTTACSHVLRTDSFS*MMPGWG Trigger: ACCCCATCCAGGCATCATGCAGCTGAAGGAGTCTGT...TCTTAAGACATGAGAACAGGCTGTAGTGTTGAACAAAGAAGGACTTTGTTTCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173136.2 |
||
| CDS-3UTR GCA 90 bp | CAGTGTTTTGTGTCCGATGTGGGTGCAGAAATTCTCTCCTTTATTTCCTATTCAGAGTCATCGGCTCGGTaGATCCATTACCTTTCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: QCFVSDVGAEILSFISYSESSAR*IHYLSV Trigger: AACAGAAAGGTAATGGATGCACCGAGCCGATGACTC...TGAATAGGAAATAAAGGAGAGAATTTCTGCACCCACATCGGACACAAAACACTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174202.8 |
||
| CDS-3UTR CCA 90 bp | AATCATTCTTTTGGAATAGTAATGCCAAAAGGAAACTCAGTACCTCTCACCTCCACTGATGCGATTCTCTaGGAGGCGGAAGTTAATGGG | + |
|
Preference number: 4 (lower is better) Translates to: NHSFGIVMPKGNSVPLTSTDAIL*EAEVNG Trigger: CCCATTAACTTCCGCCTCCCAGAGAATCGCATCAGT...GGAGGTGAGAGGTACTGAGTTTCCTTTTGGCATTACTATTCCAAAAGAATGATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023156.13 |
||
| CDS-3UTR CCA 90 bp | CTCTCCTTTCCATTTAATGACCGTGAGCACCGTCTTAGCCCGCTTCAGCTCTTTGTATCCGTCTACATTTaGACATGTGATCTTATGAAT | + |
|
Preference number: 4 (lower is better) Translates to: LSFPFNDREHRLSPLQLFVSVYI*TCDLMN Trigger: ATTCATAAGATCACATGTCCAAATGTAGACGGATAC...AAAGAGCTGAAGCGGGCTAAGACGGTGCTCACGGTCATTAAATGGAAAGGAGAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174171.2 |
||
| CDS-3UTR CCA 90 bp | TGTGTCCGATGTGGGTGCAGAAATTCTCTCCTTTATTTCCTATTCACCACTGTGATACCAAGTGACCGATaGTTTGACACTGGAAGGAAA | + |
|
Preference number: 4 (lower is better) Translates to: CVRCGCRNSLLYFLFTTVIPSDR*FDTGRK Trigger: TTTCCTTCCAGTGTCAAACCATCGGTCACTTGGTAT...CACAGTGGTGAATAGGAAATAAAGGAGAGAATTTCTGCACCCACATCGGACACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174202.8 |
||
| CDS-3UTR CCA 90 bp | GATTTTCTTCAAGCAACATTTAGAAACAAAGGCGTTGACAACATCGGAACCAGCGACAACACGGTCATTTaGAGAATAGATCTGGGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: DFLQATFRNKGVDNIGTSDNTVI*RIDLGW Trigger: CCACCCCAGATCTATTCTCCAAATGACCGTGTTGTC...GCTGGTTCCGATGTTGTCAACGCCTTTGTTTCTAAATGTTGCTTGAAGAAAATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000174202.8 |
||
| CDS-3UTR CCA 90 bp | AGAGAGTTAGGCTGCATGGAAGCTAGAGTTTTATCAGACTATGATGTGAGAGCAGCTTCTTTCCATCAATaGTCCACCAGACCTCATTGT | + |
|
Preference number: 4 (lower is better) Translates to: RELGCMEARVLSDYDVRAASFHQ*STRPHC Trigger: ACAATGAGGTCTGGTGGACCATTGATGGAAAGAAGC...TGCTCTCACATCATAGTCTGATAAAACTCTAGCTTCCATGCAGCCTAACTCTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174202.8 |
||
| CDS-3UTR CCA 90 bp | CATATTAATTTAGGGGAGGTAAGAACTTTGACAACTATATACAGAGAGCCAGGATCTTCTTCACTGGCATaGCCACCTGCAACTGCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: HINLGEVRTLTTIYREPGSSSLA*PPATAS Trigger: GGAAGCAGTTGCAGGTGGCCATGCCAGTGAAGAAGA...TCCTGGCTCTCTGTATATAGTTGTCAAAGTTCTTACCTCCCCTAAATTAATATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023156.13 |
||
| CDS-3UTR CCA 90 bp | CAGATAAATGGATCAATGATGCTTCCTAATGACCATGTTACATGCTCTGCTGTGTGGAGCCAGAATGTTTaGACTTTTCTCCCTTCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: QINGSMMLPNDHVTCSAVWSQNV*TFLPSS Trigger: GCTGGAAGGGAGAAAAGTCCAAACATTCTGGCTCCA...CACAGCAGAGCATGTAACATGGTCATTAGGAAGCATCATTGATCCATTTATCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173136.2 |
||
| 3UTR CAA 72 bp | TCCCCCTTTCTCTCACCTTCTGGCCCTTGGAGGAATTaGAACTCAACATCTAATTTCAGAATTGTGAAGAAC | + |
|
Preference number: 4 (lower is better) Translates to: SPFLSPSGPWRN*NSTSNFRIVKN Trigger: GTTCTTCACAATTCTGAAATTAGATGTTGAGTTCAAATTCCTCCAAGGGCCAGAAGGTGAGAGAAAGGGGGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000096129.9 ENSMUST00000166294.9 |
||
| CDS-3UTR TCA 90 bp | AAGCATACTATTTACAGGGGGCAATGGGAAGCAGGGATTCCTATGGAAAGATTTATCTCATGGCAGAATTaGAACAGCTGTCCTTCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: KHTIYRGQWEAGIPMERFISWQN*NSCPSE Trigger: TTCAGAAGGACAGCTGTTTCAATTCTGCCATGAGAT...AAATCTTTCCATAGGAATCCCTGCTTCCCATTGCCCCCTGTAAATAGTATGCTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000096129.9 ENSMUST00000166294.9 |
||
| CDS-3UTR TCA 90 bp | GGAAGGAATCAATTGGTTGGGATATGTGTTAGGGGCAAGACTCAGAGAGAAATTATCTCATGGCAGAATTaGAACAGCTGTCCTTCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: GRNQLVGICVRGKTQREIISWQN*NSCPSE Trigger: TTCAGAAGGACAGCTGTTTCAATTCTGCCATGAGAT...AATTTCTCTCTGAGTCTTGCCCCTAACACATATCCCAACCAATTGATTCCTTCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174202.8 |
||
| CDS-3UTR TCA 90 bp | TATGTTTTGAAACTTGTGAAAGAAATTGCACAAGTTGCCACGCAGAAGCTGATTACAGTCCTGGTGAGGTaGAAGAGACGTCCGTTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: YVLKLVKEIAQVATQKLITVLVR*KRRPFS Trigger: TGAAAACGGACGTCTCTTTCACCTCACCAGGACTGT...AATCAGCTTCTGCGTGGCAACTTGTGCAATTTCTTTCACAAGTTTCAAAACATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000096129.9 ENSMUST00000166294.9 |
||
| CDS-3UTR TCA 90 bp | CATATTAATTTAGGGGAGGTAAGAACTTTGACAACTATATACAGAGAGCCAGGACAATGCATCCTTTGGTaGGCCCACCACCTTTACAGT | + |
|
Preference number: 4 (lower is better) Translates to: HINLGEVRTLTTIYREPGQCILW*AHHLYS Trigger: ACTGTAAAGGTGGTGGGCTCACCAAAGGATGCATTG...TCCTGGCTCTCTGTATATAGTTGTCAAAGTTCTTACCTCCCCTAAATTAATATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023156.13 |
||
| CDS-3UTR TCA 90 bp | TGTGTCCGATGTGGGTGCAGAAATTCTCTCCTTTATTTCCTATTCACCACTGTGTTGATGCTCAAAATCTaGGTCCTTGTTTCATCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: CVRCGCRNSLLYFLFTTVLMLKI*VLVSSS Trigger: GGAAGATGAAACAAGGACTCAGATTTTGAGCATCAA...CACAGTGGTGAATAGGAAATAAAGGAGAGAATTTCTGCACCCACATCGGACACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174202.8 |
||
| CDS-3UTR TCA 90 bp | ATTATCATAAATACAAGTGTGTGTCCCCCTCTCTCTGCTGTTCTATTTGAAGCAAGTCGTCTGCTTTTCTaGATGAAGCTCAGGGTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: IIINTSVCPPLSAVLFEASRLLF*MKLRVS Trigger: TGAGACCCTGAGCTTCATTCAGAAAAGCAGACGACT...TGCTTCAAATAGAACAGCAGAGAGAGGGGGACACACACTTGTATTTATGATAAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023156.13 |
||
| CDS-3UTR TCA 90 bp | ATTATCATAAATACAAGTGTGTGTCCCCCTCTCTCTGCTGTTCTATTTGAAGCATACGTTTTTCAGGGATaGGTAGGAGAGACCCTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: IIINTSVCPPLSAVLFEAYVFQG*VGETLL Trigger: AAGCAGGGTCTCTCCTACTCATCCCTGAAAAACGTA...TGCTTCAAATAGAACAGCAGAGAGAGGGGGACACACACTTGTATTTATGATAAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000023156.13 |
||
| CDS-3UTR TCA 90 bp | TGTAACTTTCCTAGAGTAAGCAGGCAACATATGGAACTGAAAGAGGAGACAGGATTCGGCTCCTCTGAATaGAATCAAAAACTGCTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: CNFPRVSRQHMELKEETGFGSSE*NQKLLP Trigger: TGGAAGCAGTTTTTGATTTCATTCAGAGGAGCCGAA...TCCTGTCTCCTCTTTCAGTTCCATATGTTGCCTGCTTACTCTAGGAAAGTTACA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000096129.9 |
||
| CDS-3UTR TCA 90 bp | CTCTCACCTTCTGGCCCTTGGAGGAATTTGAACTCAACATCTAATTTCAGAATTAGACTGATGTCAGACTaGGAAGAACAGCTCTCATTC | + |
|
Preference number: 4 (lower is better) Translates to: LSPSGPWRNLNSTSNFRIRLMSD*EEQLSF Trigger: GAATGAGAGCTGTTCTTCTCAGTCTGACATCAGTCT...AATTCTGAAATTAGATGTTGAGTTCAAATTCCTCCAAGGGCCAGAAGGTGAGAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000096129.9 ENSMUST00000166294.9 |
||
| CDS-3UTR TCA 90 bp | CTCTCACCTTCTGGCCCTTGGAGGAATTTGAACTCAACATCTAATTTCAGAATTGAACATGATCCAGACTaGTGTCAGACTGAGAAGAAC | + |
|
Preference number: 4 (lower is better) Translates to: LSPSGPWRNLNSTSNFRIEHDPD*CQTEKN Trigger: GTTCTTCTCAGTCTGACATCAGTCTGGATCATGTTC...AATTCTGAAATTAGATGTTGAGTTCAAATTCCTCCAAGGGCCAGAAGGTGAGAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000096129.9 ENSMUST00000166294.9 |
||
| CDS-3UTR TCA 90 bp | CAGAAAGAGAGAAAACATAAGGAGAGTAGTCACAGACTTCATAACACCCACATGGAACATGATCCAGACTaGTGTCAGACTGAGAAGAAC | + |
|
Preference number: 4 (lower is better) Translates to: QKERKHKESSHRLHNTHMEHDPD*CQTEKN Trigger: GTTCTTCTCAGTCTGACATCAGTCTGGATCATGTTC...CATGTGGGTGTTATGAAGTCTGTGACTACTCTCCTTATGTTTTCTCTCTTTCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173136.2 |
||
| CDS-3UTR GCA 90 bp | AGAGAGTTAGGCTGCATGGAAGCTAGAGTTTTATCAGACTATGATGTGAGAGCAAACTTCCAGGGGAAATaGAACTTTGCTGCAGTAAGT | + |
|
Preference number: 4 (lower is better) Translates to: RELGCMEARVLSDYDVRANFQGK*NFAAVS Trigger: ACTTACTGCAGCAAAGTTGCATTTCCCCTGGAAGTT...TGCTCTCACATCATAGTCTGATAAAACTCTAGCTTCCATGCAGCCTAACTCTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000174202.8 |
||
| CDS-3UTR CCA 90 bp | CAGTGTTTTGTGTCCGATGTGGGTGCAGAAATTCTCTCCTTTATTTCCTATTCACTTGGATTTGTCGCATaGTATCTAGTCCCCAGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: QCFVSDVGAEILSFISYSLGFVA*YLVPSH Trigger: ATGACTGGGGACTAGATACCATGCGACAAATCCAAG...TGAATAGGAAATAAAGGAGAGAATTTCTGCACCCACATCGGACACAAAACACTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000174202.8 |
||
| CDS-3UTR CCA 90 bp | CCTGGGTGCAGAAGTTCTCATTATCATAAATACAAGTGTGTGTCCCCCTCTCTCTCATCTTCAAACACTTaGATTTGTCGCATGGTATCT | + |
|
Preference number: 4 (lower is better) Translates to: PGCRSSHYHKYKCVSPSLSSSNT*ICRMVS Trigger: AGATACCATGCGACAAATCCAAGTGTTTGAAGATGA...GAGAGAGGGGGACACACACTTGTATTTATGATAATGAGAACTTCTGCACCCAGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023156.13 |
||
| CDS-3UTR CCA 90 bp | GAGCTGAGTCATTTCTGCTGTGTATCACAGCTAGGTACATATTCCATCATAAGGAACCAGTTCCTCTCCTaGTTCTTTCTCATAGACAAC | + |
|
Preference number: 4 (lower is better) Translates to: ELSHFCCVSQLGTYSIIRNQFLS*FFLIDN Trigger: GTTGTCTATGAGAAAGAACCAGGAGAGGAACTGGTT...CCTTATGATGGAATATGTACCTAGCTGTGATACACAGCAGAAATGACTCAGCTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096129.9 |
||
| 3UTR CAA 72 bp | ATTCCAAGGGCTAAACTGGCCCTTCATTTTCAGCTATaGCCTGCAAACACTGTTAAAAGGATGATTTGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: IPRAKLALHFQL*PANTVKRMICG Trigger: ACCACAAATCATCCTTTTAACAGTGTTTGCAGGCAATAGCTGAAAATGAAGGGCCAGTTTAGCCCTTGGAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000173136.2 |
||
| CDS-3UTR TCA 90 bp | CTCTCACCTTCTGGCCCTTGGAGGAATTTGAACTCAACATCTAATTTCAGAATTATCTCATGGCAGAATTaGAACAGCTGTCCTTCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: LSPSGPWRNLNSTSNFRIISWQN*NSCPSE Trigger: TTCAGAAGGACAGCTGTTTCAATTCTGCCATGAGAT...AATTCTGAAATTAGATGTTGAGTTCAAATTCCTCCAAGGGCCAGAAGGTGAGAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000096129.9 ENSMUST00000166294.9 |
||
| CDS-3UTR TCA 90 bp | CATCCTGAGAGGTACTGGTATTGGTTTGTCCATTTTTATGAAAAACCTAATAAGCAATGCATCCTTTGGTaGGCCCACCACCTTTACAGT | + |
|
Preference number: 4 (lower is better) Translates to: HPERYWYWFVHFYEKPNKQCILW*AHHLYS Trigger: ACTGTAAAGGTGGTGGGCTCACCAAAGGATGCATTG...CTTATTAGGTTTTTCATAAAAATGGACAAACCAATACCAGTACCTCTCAGGATG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000174202.8 |
||
| CDS-3UTR TCA 90 bp | ATTATCATAAATACAAGTGTGTGTCCCCCTCTCTCTGCTGTTCTATTTGAAGCATGTACCTTGGTGGTATaGCTTTCTGTTTCACCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: IIINTSVCPPLSAVLFEACTLVV*LSVSPW Trigger: CCAAGGTGAAACAGAAAGTCATACCACCAAGGTACA...TGCTTCAAATAGAACAGCAGAGAGAGGGGGACACACACTTGTATTTATGATAAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023156.13 |
||
| CDS-3UTR TCA 90 bp | CATATTAATTTAGGGGAGGTAAGAACTTTGACAACTATATACAGAGAGCCAGGAGTCTGCTTTTCTGAATaGAGCTCAGGGTCTCATCTG | + |
|
Preference number: 4 (lower is better) Translates to: HINLGEVRTLTTIYREPGVCFSE*SSGSHL Trigger: CAGATGAGACCCTGAGCTTCATTCAGAAAAGCAGAC...TCCTGGCTCTCTGTATATAGTTGTCAAAGTTCTTACCTCCCCTAAATTAATATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023156.13 |
||
| CDS-3UTR TCA 90 bp | GTTTTGAAACTTGTGAAAGAAATTGCACAAGTTGCCACGCAGAAGCTGATTCAGATCCTTCGGCTCCTCTaGATGAAATCAAAAACTGCT | + |
|
Preference number: 4 (lower is better) Translates to: VLKLVKEIAQVATQKLIQILRLL*MKSKTA Trigger: AGCAGTTTTTGATTTCATTCAGAGGAGCCGAAGGAT...CTGAATCAGCTTCTGCGTGGCAACTTGTGCAATTTCTTTCACAAGTTTCAAAAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000096129.9 ENSMUST00000166294.9 |
||
| CDS-3UTR GCA 90 bp | GTTTTGAAACTTGTGAAAGAAATTGCACAAGTTGCCACGCAGAAGCTGATTCAGAACTTCCAGGGGAAATaGAACTTTGCTGCAGTAAGT | + |
|
Preference number: 4 (lower is better) Translates to: VLKLVKEIAQVATQKLIQNFQGK*NFAAVS Trigger: ACTTACTGCAGCAAAGTTGCATTTCCCCTGGAAGTT...CTGAATCAGCTTCTGCGTGGCAACTTGTGCAATTTCTTTCACAAGTTTCAAAAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000096129.9 ENSMUST00000166294.9 |
||
| CDS-3UTR GCA 90 bp | TGTAACTTTCCTAGAGTAAGCAGGCAACATATGGAACTGAAAGAGGAGACAGGAAAAAGCTCAAGTTCATaGCCTCGGGTAGTACATTAT | + |
|
Preference number: 4 (lower is better) Translates to: CNFPRVSRQHMELKEETGKSSSS*PRVVHY Trigger: ATAATGTACTACCCGAGGGCATGAACTTGAGCTTTT...TCCTGTCTCCTCTTTCAGTTCCATATGTTGCCTGCTTACTCTAGGAAAGTTACA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000096129.9 |
||
| CDS-3UTR GCA 90 bp | TGCCCTGAGAGCGCTTTTGCATTTTCTCACTCTCCATTAGCACCATTAAAGCTTTTCACAGCTTTGTACTaGACTAAAATGACGTTGATG | + |
|
Preference number: 4 (lower is better) Translates to: CPESAFAFSHSPLAPLKLFTALY*TKMTLM Trigger: CATCAACGTCATTTTAGTGCAGTACAAAGCTGTGAA...AAGCTTTAATGGTGCTAATGGAGAGTGAGAAAATGCAAAAGCGCTCTCAGGGCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000023156.13 |
||
| CDS-3UTR CCA 90 bp | ATTATCATAAATACAAGTGTGTGTCCCCCTCTCTCTGCTGTTCTATTTGAAGCACTTGGATTTGTCGCATaGTATCTAGTCCCCAGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: IIINTSVCPPLSAVLFEALGFVA*YLVPSH Trigger: ATGACTGGGGACTAGATACCATGCGACAAATCCAAG...TGCTTCAAATAGAACAGCAGAGAGAGGGGGACACACACTTGTATTTATGATAAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023156.13 |
||
| CDS-3UTR CCA 90 bp | CTCTCACCTTCTGGCCCTTGGAGGAATTTGAACTCAACATCTAATTTCAGAATTAACCAGTTCCTCTCCTaGTTCTTTCTCATAGACAAC | + |
|
Preference number: 4 (lower is better) Translates to: LSPSGPWRNLNSTSNFRINQFLS*FFLIDN Trigger: GTTGTCTATGAGAAAGAACCAGGAGAGGAACTGGTT...AATTCTGAAATTAGATGTTGAGTTCAAATTCCTCCAAGGGCCAGAAGGTGAGAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000096129.9 ENSMUST00000166294.9 |
||
| CDS-3UTR CCA 90 bp | TTCTTCAAGCAACATTTAGAAACAAAGGCGTTGACAACATCGGAACCAGCATACAACCAGTTCCTCTCCTaGTTCTTTCTCATAGACAAC | + |
|
Preference number: 4 (lower is better) Translates to: FFKQHLETKALTTSEPAYNQFLS*FFLIDN Trigger: GTTGTCTATGAGAAAGAACCAGGAGAGGAACTGGTT...GTATGCTGGTTCCGATGTTGTCAACGCCTTTGTTTCTAAATGTTGCTTGAAGAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174202.8 |
||
| CDS-3UTR CCA 90 bp | ATTATCATAAATACAAGTGTGTGTCCCCCTCTCTCTGCTGTTCTATTTGAAGCAGCTTCTTTCCATCAATaGTCCACCAGACCTCATTGT | + |
|
Preference number: 4 (lower is better) Translates to: IIINTSVCPPLSAVLFEAASFHQ*STRPHC Trigger: ACAATGAGGTCTGGTGGACCATTGATGGAAAGAAGC...TGCTTCAAATAGAACAGCAGAGAGAGGGGGACACACACTTGTATTTATGATAAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023156.13 |
||
| CDS-3UTR CCA 90 bp | GAGCTGAGTCATTTCTGCTGTGTATCACAGCTAGGTACATATTCCATCATAAGGTACTGTGTACCTTGGTaGTATGACTTTCTGTTTCAC | + |
|
Preference number: 4 (lower is better) Translates to: ELSHFCCVSQLGTYSIIRYCVPW*YDFLFH Trigger: GTGAAACAGAAAGTCATACCACCAAGGTACACAGTA...CCTTATGATGGAATATGTACCTAGCTGTGATACACAGCAGAAATGACTCAGCTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096129.9 |
||
| CDS-3UTR CCA 90 bp | AAAGCATACTATTTACAGGGGGCAATGGGAAGCAGGGATTCCTATGGAAAGATTTACTGTGTACCTTGGTaGTATGACTTTCTGTTTCAC | + |
|
Preference number: 4 (lower is better) Translates to: KAYYLQGAMGSRDSYGKIYCVPW*YDFLFH Trigger: GTGAAACAGAAAGTCATACCACCAAGGTACACAGTA...AATCTTTCCATAGGAATCCCTGCTTCCCATTGCCCCCTGTAAATAGTATGCTTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000096129.9 ENSMUST00000166294.9 |
||
| CDS-3UTR TCA 90 bp | GGTAAGAACTTTGACAACTATATACAGAGAGCCAGGAATTCACAAATGGAACAGATCTCATGGCAGAATTaGAACAGCTGTCCTTCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: GKNFDNYIQRARNSQMEQISWQN*NSCPSE Trigger: TTCAGAAGGACAGCTGTTTCAATTCTGCCATGAGAT...CTGTTCCATTTGTGAATTCCTGGCTCTCTGTATATAGTTGTCAAAGTTCTTACC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023156.13 |
||
| CDS-3UTR GCA 90 bp | TTCTTCAAGCAACATTTAGAAACAAAGGCGTTGACAACATCGGAACCAGCATACAAAAGCTCAAGTTCATaGCCTCGGGTAGTACATTAT | + |
|
Preference number: 4 (lower is better) Translates to: FFKQHLETKALTTSEPAYKSSSS*PRVVHY Trigger: ATAATGTACTACCCGAGGGCATGAACTTGAGCTTTT...GTATGCTGGTTCCGATGTTGTCAACGCCTTTGTTTCTAAATGTTGCTTGAAGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174202.8 |
||
| CDS-3UTR GCA 90 bp | ACAAGTACCGACCTGTCTATCTGTAGACAGATGAGAAATTACTATGATAAAACAACTGCTTCCAGAACCTaGCCTGAGGATACTTGGATT | + |
|
Preference number: 4 (lower is better) Translates to: TSTDLSICRQMRNYYDKTTASRT*PEDTWI Trigger: AATCCAAGTATCCTCAGGGCAGGTTCTGGAAGCAGT...TGTTTTATCATAGTAATTTCTCATCTGTCTACAGATAGACAGGTCGGTACTTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023156.13 |
||
| CDS-3UTR CCA 90 bp | AGAGAGTTAGGCTGCATGGAAGCTAGAGTTTTATCAGACTATGATGTGAGAGCATCATCTTCAAACACTTaGATTTGTCGCATGGTATCT | + |
|
Preference number: 4 (lower is better) Translates to: RELGCMEARVLSDYDVRASSSNT*ICRMVS Trigger: AGATACCATGCGACAAATCCAAGTGTTTGAAGATGA...TGCTCTCACATCATAGTCTGATAAAACTCTAGCTTCCATGCAGCCTAACTCTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174202.8 |
||
| CDS-3UTR CCA 90 bp | TACTTGTCTGAAGCTGCTCTTTGTCCTTGGTGTTCAATCAAGCCTATGGGTGTTGTATCCGTCTACATTTaGACATGTGATCTTATGAAT | + |
|
Preference number: 4 (lower is better) Translates to: YLSEAALCPWCSIKPMGVVSVYI*TCDLMN Trigger: ATTCATAAGATCACATGTCCAAATGTAGACGGATAC...AACACCCATAGGCTTGATTGAACACCAAGGACAAAGAGCAGCTTCAGACAAGTA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000096129.9 ENSMUST00000166294.9 |
||
| CDS-3UTR CCA 90 bp | AGTTCTCATTATCATAAATACAAGTGTGTGTCCCCCTCTCTCTGCTGTTCTATTAACCAGTTCCTCTCCTaGTTCTTTCTCATAGACAAC | + |
|
Preference number: 4 (lower is better) Translates to: SSHYHKYKCVSPSLCCSINQFLS*FFLIDN Trigger: GTTGTCTATGAGAAAGAACCAGGAGAGGAACTGGTT...AATAGAACAGCAGAGAGAGGGGGACACACACTTGTATTTATGATAATGAGAACT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023156.13 |
||
| CDS-3UTR TCA 90 bp | CTCTCACCTTCTGGCCCTTGGAGGAATTTGAACTCAACATCTAATTTCAGAATTTCGGGTAGTACATTATaGAAGTCCACTATTTCAGTA | + |
|
Preference number: 4 (lower is better) Translates to: LSPSGPWRNLNSTSNFRISGSTL*KSTISV Trigger: TACTGAAATAGTGGACTTTCATAATGTACTACCCGA...AATTCTGAAATTAGATGTTGAGTTCAAATTCCTCCAAGGGCCAGAAGGTGAGAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000096129.9 ENSMUST00000166294.9 |
||
| CDS-3UTR TCA 90 bp | CAGTGTTTTGTGTCCGATGTGGGTGCAGAAATTCTCTCCTTTATTTCCTATTCATCGGGTAGTACATTATaGAAGTCCACTATTTCAGTA | + |
|
Preference number: 4 (lower is better) Translates to: QCFVSDVGAEILSFISYSSGSTL*KSTISV Trigger: TACTGAAATAGTGGACTTTCATAATGTACTACCCGA...TGAATAGGAAATAAAGGAGAGAATTTCTGCACCCACATCGGACACAAAACACTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174202.8 |
||
| CDS-3UTR GCA 90 bp | AATCATTCTTTTGGAATAGTAATGCCAAAAGGAAACTCAGTACCTCTCACCTCCGAAATGCAACTTTGCTaGAGTAAGTTGTGTTCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: NHSFGIVMPKGNSVPLTSEMQLC*SKLCSS Trigger: TGAGGAACACAACTTACTGCAGCAAAGTTGCATTTC...GGAGGTGAGAGGTACTGAGTTTCCTTTTGGCATTACTATTCCAAAAGAATGATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023156.13 |
||
| CDS-3UTR GCA 90 bp | AGTTCTCATTATCATAAATACAAGTGTGTGTCCCCCTCTCTCTGCTGTTCTATTAAAAGCTCAAGTTCATaGCCTCGGGTAGTACATTAT | + |
|
Preference number: 4 (lower is better) Translates to: SSHYHKYKCVSPSLCCSIKSSSS*PRVVHY Trigger: ATAATGTACTACCCGAGGGCATGAACTTGAGCTTTT...AATAGAACAGCAGAGAGAGGGGGACACACACTTGTATTTATGATAATGAGAACT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023156.13 |
||
| CDS-3UTR CCA 90 bp | CTCTCACCTTCTGGCCCTTGGAGGAATTTGAACTCAACATCTAATTTCAGAATTTCATCTTCAAACACTTaGATTTGTCGCATGGTATCT | + |
|
Preference number: 4 (lower is better) Translates to: LSPSGPWRNLNSTSNFRISSSNT*ICRMVS Trigger: AGATACCATGCGACAAATCCAAGTGTTTGAAGATGA...AATTCTGAAATTAGATGTTGAGTTCAAATTCCTCCAAGGGCCAGAAGGTGAGAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000096129.9 ENSMUST00000166294.9 |
||
| CDS-3UTR CCA 90 bp | GGTAAGAACTTTGACAACTATATACAGAGAGCCAGGAATTCACAAATGGAACAGATACATCTTGTGCACTaGGAATCTCATGGCAGAATT | + |
|
Preference number: 4 (lower is better) Translates to: GKNFDNYIQRARNSQMEQIHLVH*ESHGRI Trigger: AATTCTGCCATGAGATTCCCAGTGCACAAGATGTAT...CTGTTCCATTTGTGAATTCCTGGCTCTCTGTATATAGTTGTCAAAGTTCTTACC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023156.13 |
||
| CDS-3UTR CCA 90 bp | AGTTCTCATTATCATAAATACAAGTGTGTGTCCCCCTCTCTCTGCTGTTCTATTTACTGTGTACCTTGGTaGTATGACTTTCTGTTTCAC | + |
|
Preference number: 4 (lower is better) Translates to: SSHYHKYKCVSPSLCCSIYCVPW*YDFLFH Trigger: GTGAAACAGAAAGTCATACCACCAAGGTACACAGTA...AATAGAACAGCAGAGAGAGGGGGACACACACTTGTATTTATGATAATGAGAACT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023156.13 |
||
| 3UTR CAA 72 bp | ACCACTTCATTATTAATGATTTGCAGGGTGATCCATTaGGAGCAAGGTACTACAGGCACTGCACAATTAATT | + |
|
Preference number: 4 (lower is better) Translates to: TTSLLMICRVIH*EQGTTGTAQLI Trigger: AATTAATTGTGCAGTGCCTGTAGTACCTTGCTCCAAATGGATCACCCTGCAAATCATTAATAATGAAGTGGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023156.13 |
||
| 3UTR CAA 72 bp | TATGAATACATTCTACCAACCACTCTATTCGATTGTTaGCTTATGCTGAGACAATTCCAAGGGCTAAACTGG | + |
|
Preference number: 4 (lower is better) Translates to: YEYILPTTLFDC*LMLRQFQGLNW Trigger: CCAGTTTAGCCCTTGGAATTGTCTCAGCATAAGCAAACAATCGAATAGAGTGGTTGGTAGAATGTATTCATA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173136.2 |
||
| 3UTR CAA 72 bp | TCACAAGATCAAATATCTAAATCATTTGGGAGAGGATaGGTTGTCTGTGGCACACCAGAGATAGCTACAATT | + |
|
Preference number: 4 (lower is better) Translates to: SQDQISKSFGRG*VVCGTPEIATI Trigger: AATTGTAGCTATCTCTGGTGTGCCACAGACAACCAATCCTCTCCCAAATGATTTAGATATTTGATCTTGTGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173136.2 |
||
| CDS-3UTR TCA 90 bp | CATCCTGAGAGGTACTGGTATTGGTTTGTCCATTTTTATGAAAAACCTAATAAGTTGAAACCAAGGGGATaGAAAAGCTCAAGTTCATGC | + |
|
Preference number: 4 (lower is better) Translates to: HPERYWYWFVHFYEKPNKLKPRG*KSSSSC Trigger: GCATGAACTTGAGCTTTTTCATCCCCTTGGTTTCAA...CTTATTAGGTTTTTCATAAAAATGGACAAACCAATACCAGTACCTCTCAGGATG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000174202.8 |
||
| CDS-3UTR CCA 90 bp | TTTCTCTCACCTTCTGGCCCTTGGAGGAATTTGAACTCAACATCTAATTTCAGAGTATCCGTCTACATTTaGACATGTGATCTTATGAAT | + |
|
Preference number: 4 (lower is better) Translates to: FLSPSGPWRNLNSTSNFRVSVYI*TCDLMN Trigger: ATTCATAAGATCACATGTCCAAATGTAGACGGATAC...TCTGAAATTAGATGTTGAGTTCAAATTCCTCCAAGGGCCAGAAGGTGAGAGAAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000096129.9 ENSMUST00000166294.9 |
||
| 3UTR CAA 72 bp | TCTCAAAGATTAAGTTCACTTCTGTCTCAAAACCACTaGTCCCTGGATCTAAAACAAGATAAGCCTGATACA | + |
|
Preference number: 4 (lower is better) Translates to: SQRLSSLLSQNH*SLDLKQDKPDT Trigger: TGTATCAGGCTTATCTTGTTTTAGATCCAGGGACAAGTGGTTTTGAGACAGAAGTGAACTTAATCTTTGAGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000173136.2 |
||
| CDS-3UTR TCA 90 bp | CATATTAATTTAGGGGAGGTAAGAACTTTGACAACTATATACAGAGAGCCAGGACTACATTTGGACATGTaGTCTTATGAATGCCATGTT | + |
|
Preference number: 4 (lower is better) Translates to: HINLGEVRTLTTIYREPGLHLDM*SYECHV Trigger: AACATGGCATTCATAAGATCACATGTCCAAATGTAG...TCCTGGCTCTCTGTATATAGTTGTCAAAGTTCTTACCTCCCCTAAATTAATATG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023156.13 |
||
| CDS-3UTR GCA 90 bp | CATCCTGAGAGGTACTGGTATTGGTTTGTCCATTTTTATGAAAAACCTAATAAGGAAATGCAACTTTGCTaGAGTAAGTTGTGTTCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: HPERYWYWFVHFYEKPNKEMQLC*SKLCSS Trigger: TGAGGAACACAACTTACTGCAGCAAAGTTGCATTTC...CTTATTAGGTTTTTCATAAAAATGGACAAACCAATACCAGTACCTCTCAGGATG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000174202.8 |
||
| CDS-3UTR CCA 90 bp | CATCCTGAGAGGTACTGGTATTGGTTTGTCCATTTTTATGAAAAACCTAATAAGATACATCTTGTGCACTaGGAATCTCATGGCAGAATT | + |
|
Preference number: 4 (lower is better) Translates to: HPERYWYWFVHFYEKPNKIHLVH*ESHGRI Trigger: AATTCTGCCATGAGATTCCCAGTGCACAAGATGTAT...CTTATTAGGTTTTTCATAAAAATGGACAAACCAATACCAGTACCTCTCAGGATG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000174202.8 |
||
| CDS-3UTR CCA 90 bp | ATTATCATAAATACAAGTGTGTGTCCCCCTCTCTCTGCTGTTCTATTTGAAGCAGTATCCGTCTACATTTaGACATGTGATCTTATGAAT | + |
|
Preference number: 4 (lower is better) Translates to: IIINTSVCPPLSAVLFEAVSVYI*TCDLMN Trigger: ATTCATAAGATCACATGTCCAAATGTAGACGGATAC...TGCTTCAAATAGAACAGCAGAGAGAGGGGGACACACACTTGTATTTATGATAAT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023156.13 |
||
| CDS-3UTR TCA 90 bp | CATCCTGAGAGGTACTGGTATTGGTTTGTCCATTTTTATGAAAAACCTAATAAGCTACATTTGGACATGTaGTCTTATGAATGCCATGTT | + |
|
Preference number: 4 (lower is better) Translates to: HPERYWYWFVHFYEKPNKLHLDM*SYECHV Trigger: AACATGGCATTCATAAGATCACATGTCCAAATGTAG...CTTATTAGGTTTTTCATAAAAATGGACAAACCAATACCAGTACCTCTCAGGATG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000174202.8 |
||
| CDS-3UTR TCA 90 bp | ACAAGTACCGACCTGTCTATCTGTAGACAGATGAGAAATTACTATGATAAAACATCGGGTAGTACATTATaGAAGTCCACTATTTCAGTA | + |
|
Preference number: 4 (lower is better) Translates to: TSTDLSICRQMRNYYDKTSGSTL*KSTISV Trigger: TACTGAAATAGTGGACTTTCATAATGTACTACCCGA...TGTTTTATCATAGTAATTTCTCATCTGTCTACAGATAGACAGGTCGGTACTTGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023156.13 |
||
| 3UTR CAA 72 bp | TGTGTACCAAGTGTATGTATGTGCACCACTTATGTATaGGAATCCCTAGAAGTAAAATGTAATTGGATTCTC | + |
|
Preference number: 4 (lower is better) Translates to: CVPSVCMCTTYV*ESLEVKCNWIL Trigger: GAGAATCCAATTACATTTTACTTCTAGGGATTCCAATACATAAGTGGTGCACATACATACACTTGGTACACA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096129.9 |
||
| CDS-3UTR CCA 90 bp | AACCAGCATACTGATCATTATCACAAAGATGGAAGCTTTCTCTTAGGATTTTTCGTATCCGTCTACATTTaGACATGTGATCTTATGAAT | + |
|
Preference number: 4 (lower is better) Translates to: NQHTDHYHKDGSFLLGFFVSVYI*TCDLMN Trigger: ATTCATAAGATCACATGTCCAAATGTAGACGGATAC...GAAAAATCCTAAGAGAAAGCTTCCATCTTTGTGATAATGATCAGTATGCTGGTT 34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000174202.8 |
||
| CDS TCA 90 bp | GTGACTTTCTCCTTCACAGTAGGTGACACAGCAGCGACAGGCTGCTaGGGGTTTCCCTCGGTGCTTGGACATCGTGCCCGGGGCTGGCTC | + |
|
Preference number: 5 (lower is better) Translates to: VTFSFTVGDTAATGC*GFPSVLGHRARGWL Trigger: GAGCCAGCCCCGGGCACGATGTCCAAGCACCGAGGGAAACCCTCAGCAGCCTGTCGCTGCTGTGTCACCTACTGTGAAGGAGAAAGTCAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000096129.9 ENSMUST00000166294.9 ENSMUST00000173136.2 |
||
| CDS TCA 90 bp | CTTGGACATCGTGCCCGGGGCTGGCTCTGCTCCAGACACCCTCTCTaGGCTTCGGAGTTCTGGGGGCTCTTTCAAACGACTTCTCCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: LGHRARGWLCSRHPL*ASEFWGLFQTTSPL Trigger: CAGAGGAGAAGTCGTTTGAAAGAGCCCCCAGAACTCCGAAGCTCAGAGAGGGTGTCTGGAGCAGAGCCAGCCCCGGGCACGATGTCCAAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000096129.9 ENSMUST00000166294.9 ENSMUST00000173136.2 |
||
| CDS GCA 90 bp | TTCTCTGGGAGGCGGAAGTTAATGGGCTCCTCCAGGTCCCGGTCTTaGCTGGTCCAGTACCAGATCAGGGTAAGGCCAGAGGAATGGGCA | + |
|
Preference number: 5 (lower is better) Translates to: FSGRRKLMGSSRSRS*LVQYQIRVRPEEWA Trigger: TGCCCATTCCTCTGGCCTTACCCTGATCTGGTACTGGACCAGGCAAGACCGGGACCTGGAGGAGCCCATTAACTTCCGCCTCCCAGAGAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000023156.13 ENSMUST00000096129.9 ENSMUST00000166294.9 ENSMUST00000174171.2 ENSMUST00000174202.8 |
||
| CDS GCA 90 bp | GGCGGAGTGCAAGAGCTGAGATCTGGGGAGCGGGTTCGGGTCGGGTaGCATTTTGTATCCACTGACTTTCAGACTCTTGGAGAGGAGGCT | + |
|
Preference number: 5 (lower is better) Translates to: GGVQELRSGERVRVG*HFVSTDFQTLGEEA Trigger: AGCCTCCTCTCCAAGAGTCTGAAAGTCAGTGGATACAAAATGGCACCCGACCCGAACCCGCTCCCCAGATCTCAGCTCTTGCACTCCGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000096129.9 |
||
| CDS CCA 90 bp | GGGCCGGAACCAGAGCACATCTTTCTCCTTACTGATGCGATTCTCTaGGAGGCGGAAGTTAATGGGCTCCTCCAGGTCCCGGTCTTGCCT | + |
|
Preference number: 5 (lower is better) Translates to: GPEPEHIFLLTDAIL*EAEVNGLLQVPVLP Trigger: AGGCAAGACCGGGACCTGGAGGAGCCCATTAACTTCCGCCTCCCAGAGAATCGCATCAGTAAGGAGAAAGATGTGCTCTGGTTCCGGCCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000023156.13 ENSMUST00000096129.9 ENSMUST00000166294.9 ENSMUST00000174171.2 ENSMUST00000174202.8 |
||
| CDS GCA 90 bp | AGGCTTACAGAGGTGTGTTTCCCACTGGGGATGCGTGTGCATCTCTaGCCGGCTCTTGCTCCTGAGGTGACTTTCTCCTTCACAGTAGGT | + |
|
Preference number: 5 (lower is better) Translates to: RLTEVCFPLGMRVHL*PALAPEVTFSFTVG Trigger: ACCTACTGTGAAGGAGAAAGTCACCTCAGGAGCAAGAGCCGGGCAGAGATGCACACGCATCCCCAGTGGGAAACACACCTCTGTAAGCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096129.9 |
||
| CDS TCA 90 bp | GAGATCTGGGGAGCGGGTTCGGGTCGGGTGCCATTTTGTATCCACTaGCTTTCAGACTCTTGGAGAGGAGGCTTACAGAGGTGTGTTTCC | + |
|
Preference number: 5 (lower is better) Translates to: EIWGAGSGRVPFCIH*LSDSWRGGLQRCVS Trigger: GGAAACACACCTCTGTAAGCCTCCTCTCCAAGAGTCTGAAAGTCAGTGGATACAAAATGGCACCCGACCCGAACCCGCTCCCCAGATCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000096129.9 |
||
| CDS CCA 90 bp | GACCGTGGCTCCAAAACCACAGGCGAGTTCTACTGTGTACCTTGGTaGTATGACTTTCTGTTTCACCTTGGCAGCCTGCTCAGCTTCCCC | + |
|
Preference number: 5 (lower is better) Translates to: DRGSKTTGEFYCVPW*YDFLFHLGSLLSFP Trigger: GGGGAAGCTGAGCAGGCTGCCAAGGTGAAACAGAAAGTCATACCACCAAGGTACACAGTAGAACTCGCCTGTGGTTTTGGAGCCACGGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023156.13 ENSMUST00000096129.9 ENSMUST00000166294.9 |
||
| CDS-3UTR CAA 90 bp | TTCTCTCCTTTCCATTTAATGACCGTGAGCACCGTCTTAGCCCGCTTCAGCTCTCTCCAGGTCCCGGTCTaGCCTGGTCCAGTACCAGAT | + |
|
Preference number: 5 (lower is better) Translates to: FSPFHLMTVSTVLARFSSLQVPV*PGPVPD Trigger: ATCTGGTACTGGACCAGGCAAGACCGGGACCTGGAG...AGAGCTGAAGCGGGCTAAGACGGTGCTCACGGTCATTAAATGGAAAGGAGAGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174171.2 |
||
| CDS-3UTR CAA 90 bp | CTTGGGATAGACACATCCTGTGAGTGTCAAAGCCCTGGTCTTTTGGGTGCAAAACTCCAGGTCCCGGTCTaGCCTGGTCCAGTACCAGAT | + |
|
Preference number: 5 (lower is better) Translates to: LGIDTSCECQSPGLLGAKLQVPV*PGPVPD Trigger: ATCTGGTACTGGACCAGGCAAGACCGGGACCTGGAG...TTTTGCACCCAAAAGACCAGGGCTTTGACACTCACAGGATGTGTCTATCCCAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000096129.9 ENSMUST00000166294.9 |
||
| CDS-3UTR CAA 90 bp | CTATTTACAGGGGGCAATGGGAAGCAGGGATTCCTATGGAAAGATTTGGTCCCTGATGCCTGGATGGGGTaGCTCAAGCGGACGGTACTC | + |
|
Preference number: 5 (lower is better) Translates to: LFTGGNGKQGFLWKDLVPDAWMG*LKRTVL Trigger: GAGTACCGTCCGCTTGAGCAACCCCATCCAGGCATC...AGGGACCAAATCTTTCCATAGGAATCCCTGCTTCCCATTGCCCCCTGTAAATAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000096129.9 ENSMUST00000166294.9 |
||
| CDS-3UTR CAA 90 bp | CCAATGACAAAAAGCATACTATTTACAGGGGGCAATGGGAAGCAGGGATTCCTAGGTTTCCCTCGGTGCTaGGACATCGTGCCCGGGGCT | + |
|
Preference number: 5 (lower is better) Translates to: PMTKSILFTGGNGKQGFLGFPRC*DIVPGA Trigger: AGCCCCGGGCACGATGTCCAAGCACCGAGGGAAACC...TAGGAATCCCTGCTTCCCATTGCCCCCTGTAAATAGTATGCTTTTTGTCATTGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000096129.9 ENSMUST00000166294.9 |
||
| CDS TCA 90 bp | TTTCTCCCTTCCAGCTTACAAAAGACACAGACTCCTTCAGCTGCATaGTGCCTGGATGGGGTTGCTCAAGCGGACGGTACTCCACCACAA | + |
|
Preference number: 5 (lower is better) Translates to: FLPSSLQKTQTPSAA*CLDGVAQADGTPPQ Trigger: TTGTGGTGGAGTACCGTCCGCTTGAGCAACCCCATCCAGGCATCATGCAGCTGAAGGAGTCTGTGTCTTTTGTAAGCTGGAAGGGAGAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000096129.9 ENSMUST00000166294.9 ENSMUST00000173136.2 |
||
| CDS TCA 90 bp | CTGGGGGCTCTTTCAAACGACTTCTCCTCTGAACATGATCCAGACTaGTGTCAGACTGAGAAGAACAGCTCTCATTCCAGCCGGAGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: LGALSNDFSSEHDPD*CQTEKNSSHSSRSW Trigger: CCAGCTCCGGCTGGAATGAGAGCTGTTCTTCTCAGTCTGACATCAGTCTGGATCATGTTCAGAGGAGAAGTCGTTTGAAAGAGCCCCCAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000096129.9 ENSMUST00000166294.9 ENSMUST00000173136.2 |
||
| CDS GCA 90 bp | ACAAAAGACACAGACTCCTTCAGCTGCATGATGCCTGGATGGGGTTaGTCAAGCGGACGGTACTCCACCACAATGAGCTTAGTGGCAATG | + |
|
Preference number: 5 (lower is better) Translates to: TKDTDSFSCMMPGWG*SSGRYSTTMSLVAM Trigger: CATTGCCACTAAGCTCATTGTGGTGGAGTACCGTCCGCTTGAGCAACCCCATCCAGGCATCATGCAGCTGAAGGAGTCTGTGTCTTTTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000096129.9 ENSMUST00000166294.9 ENSMUST00000173136.2 |
||
| CDS CCA 90 bp | TCAAAGAGGGGGCACTTGATTCGAGCCGGCTCATCTTCAAACACTTaGATTTGTCGCATGGTATCTAGTCCCCAGTCATCACAGCGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: SKRGHLIRAGSSSNT*ICRMVSSPQSSQRS Trigger: GGAGCGCTGTGATGACTGGGGACTAGATACCATGCGACAAATCCAAGTGTTTGAAGATGAGCCGGCTCGAATCAAGTGCCCCCTCTTTGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000023156.13 ENSMUST00000096129.9 ENSMUST00000166294.9 ENSMUST00000174171.2 ENSMUST00000174202.8 |
||
| CDS CCA 90 bp | CAGCTTACAAAAGACACAGACTCCTTCAGCTGCATGATGCCTGGATaGGGTTGCTCAAGCGGACGGTACTCCACCACAATGAGCTTAGTG | + |
|
Preference number: 5 (lower is better) Translates to: QLTKDTDSFSCMMPG*GCSSGRYSTTMSLV Trigger: CACTAAGCTCATTGTGGTGGAGTACCGTCCGCTTGAGCAACCCCATCCAGGCATCATGCAGCTGAAGGAGTCTGTGTCTTTTGTAAGCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000096129.9 ENSMUST00000166294.9 ENSMUST00000173136.2 |
||
| CDS CCA 90 bp | CTTCCAGCTTACAAAAGACACAGACTCCTTCAGCTGCATGATGCCTaGATGGGGTTGCTCAAGCGGACGGTACTCCACCACAATGAGCTT | + |
|
Preference number: 5 (lower is better) Translates to: LPAYKRHRLLQLHDA*MGLLKRTVLHHNEL Trigger: AAGCTCATTGTGGTGGAGTACCGTCCGCTTGAGCAACCCCATCCAGGCATCATGCAGCTGAAGGAGTCTGTGTCTTTTGTAAGCTGGAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000096129.9 ENSMUST00000166294.9 ENSMUST00000173136.2 |
||
| CDS-3UTR CAA 90 bp | AAGTACTCTTTACTGGCCCACATCACAAGGAGACACCAGTTCCTAGCTACCTTTGATGCCTGGATGGGGTaGCTCAAGCGGACGGTACTC | + |
|
Preference number: 5 (lower is better) Translates to: KYSLLAHITRRHQFLATFDAWMG*LKRTVL Trigger: GAGTACCGTCCGCTTGAGCAACCCCATCCAGGCATC...AAAGGTAGCTAGGAACTGGTGTCTCCTTGTGATGTGGGCCAGTAAAGAGTACTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000096129.9 ENSMUST00000166294.9 |
||
| CDS TCA 90 bp | ACGGTCATTTGGAGAATAGATCTGGGGTGGCAATGCATCCTTTGGTaGGCCCACCACCTTTACAGTCACAGTCCTGGTGAGGTGAAAGAG | + |
|
Preference number: 5 (lower is better) Translates to: TVIWRIDLGWQCILW*AHHLYSHSPGEVKE Trigger: CTCTTTCACCTCACCAGGACTGTGACTGTAAAGGTGGTGGGCTCACCAAAGGATGCATTGCCACCCCAGATCTATTCTCCAAATGACCGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000023156.13 ENSMUST00000096129.9 ENSMUST00000166294.9 ENSMUST00000174171.2 ENSMUST00000174202.8 |
||
| CDS CCA 90 bp | AAAGACCGTGGCTCCAAAACCACAGGCGAGTTCTACTGTGTACCTTaGTGGTATGACTTTCTGTTTCACCTTGGCAGCCTGCTCAGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: KDRGSKTTGEFYCVP*WYDFLFHLGSLLSF Trigger: GAAGCTGAGCAGGCTGCCAAGGTGAAACAGAAAGTCATACCACCAAGGTACACAGTAGAACTCGCCTGTGGTTTTGGAGCCACGGTCTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023156.13 ENSMUST00000096129.9 ENSMUST00000166294.9 |
||
| CDS CCA 90 bp | AGCGGACGGTACTCCACCACAATGAGCTTAGTGGCAATGGAGTTCTaGCACATGACACCCAGCTTAAACTCCAGCATGCTGATGCTCTTT | + |
|
Preference number: 5 (lower is better) Translates to: SGRYSTTMSLVAMEF*HMTPSLNSSMLMLF Trigger: AAAGAGCATCAGCATGCTGGAGTTTAAGCTGGGTGTCATGTGCCAGAACTCCATTGCCACTAAGCTCATTGTGGTGGAGTACCGTCCGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000096129.9 ENSMUST00000166294.9 ENSMUST00000173136.2 |
||
| CDS CCA 90 bp | ACAGAGTCATCGGCTCGGTGCATCCATTACCTTTCTGTTTCACCTTaGCAGCCTGCTCAGCTTCCCCTTTGGTATTTCGAGCATGACAGA | + |
|
Preference number: 5 (lower is better) Translates to: TESSARCIHYLSVSP*QPAQLPLWYFEHDR Trigger: TCTGTCATGCTCGAAATACCAAAGGGGAAGCTGAGCAGGCTGCCAAGGTGAAACAGAAAGGTAATGGATGCACCGAGCCGATGACTCTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174202.8 |
||
| CDS-3UTR CAA 90 bp | TACTTGTCTGAAGCTGCTCTTTGTCCTTGGTGTTCAATCAAGCCTATGGGTGTTCTCCAGGTCCCGGTCTaGCCTGGTCCAGTACCAGAT | + |
|
Preference number: 5 (lower is better) Translates to: YLSEAALCPWCSIKPMGVLQVPV*PGPVPD Trigger: ATCTGGTACTGGACCAGGCAAGACCGGGACCTGGAG...AACACCCATAGGCTTGATTGAACACCAAGGACAAAGAGCAGCTTCAGACAAGTA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000096129.9 ENSMUST00000166294.9 |
||
| CDS-3UTR CAA 90 bp | TGTGTCCGATGTGGGTGCAGAAATTCTCTCCTTTATTTCCTATTCACCACTGTGCTCCAGGTCCCGGTCTaGCCTGGTCCAGTACCAGAT | + |
|
Preference number: 5 (lower is better) Translates to: CVRCGCRNSLLYFLFTTVLQVPV*PGPVPD Trigger: ATCTGGTACTGGACCAGGCAAGACCGGGACCTGGAG...CACAGTGGTGAATAGGAAATAAAGGAGAGAATTTCTGCACCCACATCGGACACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174202.8 |
||
| CDS-3UTR CAA 90 bp | CTCTCACCTTCTGGCCCTTGGAGGAATTTGAACTCAACATCTAATTTCAGAATTGGTTTCCCTCGGTGCTaGGACATCGTGCCCGGGGCT | + |
|
Preference number: 5 (lower is better) Translates to: LSPSGPWRNLNSTSNFRIGFPRC*DIVPGA Trigger: AGCCCCGGGCACGATGTCCAAGCACCGAGGGAAACC...AATTCTGAAATTAGATGTTGAGTTCAAATTCCTCCAAGGGCCAGAAGGTGAGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000096129.9 ENSMUST00000166294.9 |
||
| CDS TCA 90 bp | CATAGTCAGGGCTCAGGACAACAATCATCCTTCGGCTCCTCTGAATaGAATCAAAAACTGCTTCCACGGTATTTCCCCCAGGCAGGCTGT | + |
|
Preference number: 5 (lower is better) Translates to: HSQGSGQQSSFGSSE*NQKLLPRYFPQAGC Trigger: ACAGCCTGCCTGGGGGAAATACCGTGGAAGCAGTTTTTGATTTCATTCAGAGGAGCCGAAGGATGATTGTTGTCCTGAGCCCTGACTATG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000096129.9 ENSMUST00000166294.9 |
||
| CDS-3UTR CAA 90 bp | AGTCATCTGCATGCTCAAGGGTGCCTGATAGGTCCTGGCTTGAAGGCCATGTGCCTCATCTTCAAACACTaGGATTTGTCGCATGGTATC | + |
|
Preference number: 5 (lower is better) Translates to: SHLHAQGCLIGPGLKAMCLIFKH*DLSHGI Trigger: GATACCATGCGACAAATCCAAGTGTTTGAAGATGAG...GCACATGGCCTTCAAGCCAGGACCTATCAGGCACCCTTGAGCATGCAGATGACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000096129.9 ENSMUST00000166294.9 |
||
| CDS-3UTR CAA 90 bp | GGAGGTGATATAATAGTGGCTGGGATGAATACAGACTCCAACCGTGCAGAAACTTTTTCTAGGCCAGCCTaGAGCTCCAGGAGGGCTTGT | + |
|
Preference number: 5 (lower is better) Translates to: GGDIIVAGMNTDSNRAETFSRPA*SSRRAC Trigger: ACAAGCCCTCCTGGAGCTCAAGGCTGGCCTAGAAAA...AGTTTCTGCACGGTTGGAGTCTGTATTCATCCCAGCCACTATTATATCACCTCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023156.13 |
||
| CDS TCA 90 bp | CAGTGCTGTAGTTGTACTTCAGGAAGTGTTCAAAGAGGGGGCACTTaGTTCGAGCCGGCTCATCTTCAAACACTTGGATTTGTCGCATGG | + |
|
Preference number: 5 (lower is better) Translates to: QCCSCTSGSVQRGGT*FEPAHLQTLGFVAW Trigger: CCATGCGACAAATCCAAGTGTTTGAAGATGAGCCGGCTCGAATCAAGTGCCCCCTCTTTGAACACTTCCTGAAGTACAACTACAGCACTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000023156.13 ENSMUST00000096129.9 ENSMUST00000166294.9 ENSMUST00000174171.2 ENSMUST00000174202.8 |
||
| CDS TCA 90 bp | GGTAAAAGAGGACCATCTCCAGCCAGTAAACATGGTAAACCACAATaGGAACCACTACCAGAAAGACCGTGGCTCCAAAACCACAGGCGA | + |
|
Preference number: 5 (lower is better) Translates to: GKRGPSPASKHGKPQ*EPLPERPWLQNHRR Trigger: TCGCCTGTGGTTTTGGAGCCACGGTCTTTCTGGTAGTGGTTCTCATTGTGGTTTACCATGTTTACTGGCTGGAGATGGTCCTCTTTTACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000023156.13 ENSMUST00000096129.9 ENSMUST00000166294.9 ENSMUST00000174171.2 |
||
| CDS-3UTR CAA 90 bp | ATTGCTAGACCACCTGGGACTCTTCTTCACTGGCATGGCCACCTGCAACTGCTTCTCATCTTCAAACACTaGGATTTGTCGCATGGTATC | + |
|
Preference number: 5 (lower is better) Translates to: IARPPGTLLHWHGHLQLLLIFKH*DLSHGI Trigger: GATACCATGCGACAAATCCAAGTGTTTGAAGATGAG...AAGCAGTTGCAGGTGGCCATGCCAGTGAAGAAGAGTCCCAGGTGGTCTAGCAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174171.2 |
||
| CDS-3UTR CAA 90 bp | CTCTCCTTTCCATTTAATGACCGTGAGCACCGTCTTAGCCCGCTTCAGCTCTTTCTTTGCTGCAGTAAGTaGTGTTCCTCAACATGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: LSFPFNDREHRLSPLQLFLCCSK*CSSTCR Trigger: CCTGCATGTTGAGGAACACAACTTACTGCAGCAAAG...AAAGAGCTGAAGCGGGCTAAGACGGTGCTCACGGTCATTAAATGGAAAGGAGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174171.2 |
||
| CDS-3UTR CAA 90 bp | ACCGTCTTAGCCCGCTTCAGCTCTTTCACCTTCATGTCCTTCACAGCTTTGTACGTCCACCAGACCTCATaGTGGGAGTCCATAATGAAA | + |
|
Preference number: 5 (lower is better) Translates to: TVLARFSSFTFMSFTALYVHQTS*WESIMK Trigger: TTTCATTATGGACTCCCACAATGAGGTCTGGTGGAC...GTACAAAGCTGTGAAGGACATGAAGGTGAAAGAGCTGAAGCGGGCTAAGACGGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174171.2 |
||
| CDS-3UTR CAA 90 bp | CAGAAAGAGAGAAAACATAAGGAGAGTAGTCACAGACTTCATAACACCCACATGGATGCCTGGATGGGGTaGCTCAAGCGGACGGTACTC | + |
|
Preference number: 5 (lower is better) Translates to: QKERKHKESSHRLHNTHMDAWMG*LKRTVL Trigger: GAGTACCGTCCGCTTGAGCAACCCCATCCAGGCATC...CATGTGGGTGTTATGAAGTCTGTGACTACTCTCCTTATGTTTTCTCTCTTTCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000173136.2 |
||
| CDS-3UTR CAA 90 bp | GTCTACCAGAACCTGCTCCCTTTCAAGTCACTCCTTGGGATAGACACATCCTGTTTGGAGCCAGAATGTTaGGACTTTTCTCCCTTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: VYQNLLPFKSLLGIDTSCLEPEC*DFSPFQ Trigger: CTGGAAGGGAGAAAAGTCCAAACATTCTGGCTCCAA...ACAGGATGTGTCTATCCCAAGGAGTGACTTGAAAGGGAGCAGGTTCTGGTAGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000096129.9 ENSMUST00000166294.9 |
||
| CDS-3UTR CAA 90 bp | TTTATTTTGGTGCTTAGAATTAGGAAAATAGGGCTTGATTGTCCTCGGGATCTTGGTTTCCCTCGGTGCTaGGACATCGTGCCCGGGGCT | + |
|
Preference number: 5 (lower is better) Translates to: FILVLRIRKIGLDCPRDLGFPRC*DIVPGA Trigger: AGCCCCGGGCACGATGTCCAAGCACCGAGGGAAACC...AAGATCCCGAGGACAATCAAGCCCTATTTTCCTAATTCTAAGCACCAAAATAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000173136.2 |
||
| CDS-3UTR CAA 90 bp | ACCGTCTTAGCCCGCTTCAGCTCTTTCACCTTCATGTCCTTCACAGCTTTGTACCAAGTGACCGATGGTTaGACACTGGAAGGAAAGTAT | + |
|
Preference number: 5 (lower is better) Translates to: TVLARFSSFTFMSFTALYQVTDG*TLEGKY Trigger: ATACTTTCCTTCCAGTGTCAAACCATCGGTCACTTG...GTACAAAGCTGTGAAGGACATGAAGGTGAAAGAGCTGAAGCGGGCTAAGACGGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174171.2 |
||
| CDS-3UTR CAA 90 bp | TTGTTCCCCCTTTCTCTCACCTTCTGGCCCTTGGAGGAATTTGAACTCAACATCAGACAACACGGTCATTaGGAGAATAGATCTGGGGTG | + |
|
Preference number: 5 (lower is better) Translates to: LFPLSLTFWPLEEFELNIRQHGH*ENRSGV Trigger: CACCCCAGATCTATTCTCCAAATGACCGTGTTGTCT...GATGTTGAGTTCAAATTCCTCCAAGGGCCAGAAGGTGAGAGAAAGGGGGAACAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000096129.9 ENSMUST00000166294.9 |
||
| CDS-3UTR CAA 90 bp | ATTATCATAAATACAAGTGTGTGTCCCCCTCTCTCTGCTGTTCTATTTGAAGCAGAGCTCCAGGAGGGCTaGTGTTCCCTGGAGCACGTA | + |
|
Preference number: 5 (lower is better) Translates to: IIINTSVCPPLSAVLFEAELQEG*CSLEHV Trigger: TACGTGCTCCAGGGAACACAAGCCCTCCTGGAGCTC...TGCTTCAAATAGAACAGCAGAGAGAGGGGGACACACACTTGTATTTATGATAAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023156.13 |
||
| CDS TCA 90 bp | TGGCTCCAAAACCACAGGCGAGTTCTACTGTGTACCTTGGTGGTATaGCTTTCATTAATAGTGATGTCGACTGTGACGTCATCAGGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: WLQNHRRVLLCTLVV*LSLIVMSTVTSSGF Trigger: GAAGCCTGATGACGTCACAGTCGACATCACTATTAATGAAAGTCATACCACCAAGGTACACAGTAGAACTCGCCTGTGGTTTTGGAGCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174171.2 |
||
| CDS-3UTR CAA 90 bp | CATATTAATTTAGGGGAGGTAAGAACTTTGACAACTATATACAGAGAGCCAGGACTCCAGGTCCCGGTCTaGCCTGGTCCAGTACCAGAT | + |
|
Preference number: 5 (lower is better) Translates to: HINLGEVRTLTTIYREPGLQVPV*PGPVPD Trigger: ATCTGGTACTGGACCAGGCAAGACCGGGACCTGGAG...TCCTGGCTCTCTGTATATAGTTGTCAAAGTTCTTACCTCCCCTAAATTAATATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023156.13 |
||
| CDS-3UTR CAA 90 bp | TTACTGGCCCACATCACAAGGAGACACCAGTTCCTAGCTACCTTTGAATCCCTTCAAGTGACCGATGGTTaGACACTGGAAGGAAAGTAT | + |
|
Preference number: 5 (lower is better) Translates to: LLAHITRRHQFLATFESLQVTDG*TLEGKY Trigger: ATACTTTCCTTCCAGTGTCAAACCATCGGTCACTTG...AAGGGATTCAAAGGTAGCTAGGAACTGGTGTCTCCTTGTGATGTGGGCCAGTAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000096129.9 ENSMUST00000166294.9 |
||
| CDS-3UTR CAA 90 bp | CCTGGGTGCAGAAGTTCTCATTATCATAAATACAAGTGTGTGTCCCCCTCTCTCAGACAACACGGTCATTaGGAGAATAGATCTGGGGTG | + |
|
Preference number: 5 (lower is better) Translates to: PGCRSSHYHKYKCVSPSLRQHGH*ENRSGV Trigger: CACCCCAGATCTATTCTCCAAATGACCGTGTTGTCT...GAGAGAGGGGGACACACACTTGTATTTATGATAATGAGAACTTCTGCACCCAGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023156.13 |
||
| CDS-3UTR CAA 90 bp | ACAGCTTTGTACTGCACTAAAATGACGTTGATGTTGCCCCGGGAGGCCATATTTAGACAACACGGTCATTaGGAGAATAGATCTGGGGTG | + |
|
Preference number: 5 (lower is better) Translates to: TALYCTKMTLMLPREAIFRQHGH*ENRSGV Trigger: CACCCCAGATCTATTCTCCAAATGACCGTGTTGTCT...AAATATGGCCTCCCGGGGCAACATCAACGTCATTTTAGTGCAGTACAAAGCTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000174171.2 |
||
| CDS-3UTR CAA 90 bp | CCTGGGTGCAGAAGTTCTCATTATCATAAATACAAGTGTGTGTCCCCCTCTCTCGTCCACCAGACCTCATaGTGGGAGTCCATAATGAAA | + |
|
Preference number: 5 (lower is better) Translates to: PGCRSSHYHKYKCVSPSLVHQTS*WESIMK Trigger: TTTCATTATGGACTCCCACAATGAGGTCTGGTGGAC...GAGAGAGGGGGACACACACTTGTATTTATGATAATGAGAACTTCTGCACCCAGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023156.13 |
||
| CDS-3UTR CAA 90 bp | CTGCAGAAAGACCCTACTTGTCTGAAGCTGCTCTTTGTCCTTGGTGTTCAATCAGTCCACCAGACCTCATaGTGGGAGTCCATAATGAAA | + |
|
Preference number: 5 (lower is better) Translates to: LQKDPTCLKLLFVLGVQSVHQTS*WESIMK Trigger: TTTCATTATGGACTCCCACAATGAGGTCTGGTGGAC...TGATTGAACACCAAGGACAAAGAGCAGCTTCAGACAAGTAGGGTCTTTCTGCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000096129.9 ENSMUST00000166294.9 |
||
| CDS-3UTR CAA 90 bp | GGAGGTGATATAATAGTGGCTGGGATGAATACAGACTCCAACCGTGCAGAAACTAAAATGACGTTGATGTaGCCCCGGGAGGCCATATTT | + |
|
Preference number: 5 (lower is better) Translates to: GGDIIVAGMNTDSNRAETKMTLM*PREAIF Trigger: AAATATGGCCTCCCGGGGCAACATCAACGTCATTTT...AGTTTCTGCACGGTTGGAGTCTGTATTCATCCCAGCCACTATTATATCACCTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023156.13 |
||
| CDS-3UTR CAA 90 bp | GACAAAAAGCATACTATTTACAGGGGGCAATGGGAAGCAGGGATTCCTATGGAACTGACTTTCAGACTCTaGGAGAGGAGGCTTACAGAG | + |
|
Preference number: 5 (lower is better) Translates to: DKKHTIYRGQWEAGIPMELTFRL*ERRLTE Trigger: CTCTGTAAGCCTCCTCTCCAAGAGTCTGAAAGTCAG...TTCCATAGGAATCCCTGCTTCCCATTGCCCCCTGTAAATAGTATGCTTTTTGTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000096129.9 |
||
| CDS-3UTR CAA 90 bp | TGTGTCCGATGTGGGTGCAGAAATTCTCTCCTTTATTTCCTATTCACCACTGTGAGACAACACGGTCATTaGGAGAATAGATCTGGGGTG | + |
|
Preference number: 5 (lower is better) Translates to: CVRCGCRNSLLYFLFTTVRQHGH*ENRSGV Trigger: CACCCCAGATCTATTCTCCAAATGACCGTGTTGTCT...CACAGTGGTGAATAGGAAATAAAGGAGAGAATTTCTGCACCCACATCGGACACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174202.8 |
||
| CDS-3UTR CAA 90 bp | TGTGTCCGATGTGGGTGCAGAAATTCTCTCCTTTATTTCCTATTCACCACTGTGGTCCACCAGACCTCATaGTGGGAGTCCATAATGAAA | + |
|
Preference number: 5 (lower is better) Translates to: CVRCGCRNSLLYFLFTTVVHQTS*WESIMK Trigger: TTTCATTATGGACTCCCACAATGAGGTCTGGTGGAC...CACAGTGGTGAATAGGAAATAAAGGAGAGAATTTCTGCACCCACATCGGACACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174202.8 |
||
| CDS-3UTR CAA 90 bp | ATGGAAAGATTTGGTCCCTGGGGACACAAATGTGCTGGCGGTTTGCTGTTGAGCCCTTTCCATCAAGAATaGTTTCATCTGTTCCAAAGT | + |
|
Preference number: 5 (lower is better) Translates to: MERFGPWGHKCAGGLLLSPFHQE*FHLFQS Trigger: ACTTTGGAACAGATGAAACAATTCTTGATGGAAAGG...GCTCAACAGCAAACCGCCAGCACATTTGTGTCCCCAGGGACCAAATCTTTCCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000096129.9 ENSMUST00000166294.9 |
||
| CDS-3UTR CAA 90 bp | CTGCAGAAAGACCCTACTTGTCTGAAGCTGCTCTTTGTCCTTGGTGTTCAATCATCGAAGATGCACAGCTaGTATCCAAACTCATTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: LQKDPTCLKLLFVLGVQSSKMHS*YPNSFS Trigger: GGAGAATGAGTTTGGATACAAGCTGTGCATCTTCGA...TGATTGAACACCAAGGACAAAGAGCAGCTTCAGACAAGTAGGGTCTTTCTGCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000096129.9 ENSMUST00000166294.9 |
||
| CDS-3UTR CAA 90 bp | AAGTACTCTTTACTGGCCCACATCACAAGGAGACACCAGTTCCTAGCTACCTTTCTCATCTTCAAACACTaGGATTTGTCGCATGGTATC | + |
|
Preference number: 5 (lower is better) Translates to: KYSLLAHITRRHQFLATFLIFKH*DLSHGI Trigger: GATACCATGCGACAAATCCAAGTGTTTGAAGATGAG...AAAGGTAGCTAGGAACTGGTGTCTCCTTGTGATGTGGGCCAGTAAAGAGTACTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000096129.9 ENSMUST00000166294.9 |
||
| CDS-3UTR CAA 90 bp | AAGCATACTATTTACAGGGGGCAATGGGAAGCAGGGATTCCTATGGAAAGATTTCTTTGCTGCAGTAAGTaGTGTTCCTCAACATGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: KHTIYRGQWEAGIPMERFLCCSK*CSSTCR Trigger: CCTGCATGTTGAGGAACACAACTTACTGCAGCAAAG...AAATCTTTCCATAGGAATCCCTGCTTCCCATTGCCCCCTGTAAATAGTATGCTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000096129.9 ENSMUST00000166294.9 |
||
| CDS-3UTR CAA 90 bp | CCAATGACAAAAAGCATACTATTTACAGGGGGCAATGGGAAGCAGGGATTCCTACAAGTGACCGATGGTTaGACACTGGAAGGAAAGTAT | + |
|
Preference number: 5 (lower is better) Translates to: PMTKSILFTGGNGKQGFLQVTDG*TLEGKY Trigger: ATACTTTCCTTCCAGTGTCAAACCATCGGTCACTTG...TAGGAATCCCTGCTTCCCATTGCCCCCTGTAAATAGTATGCTTTTTGTCATTGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000096129.9 ENSMUST00000166294.9 |
||
| CDS-3UTR CAA 90 bp | AAGCATACTATTTACAGGGGGCAATGGGAAGCAGGGATTCCTATGGAAAGATTTAGACAACACGGTCATTaGGAGAATAGATCTGGGGTG | + |
|
Preference number: 5 (lower is better) Translates to: KHTIYRGQWEAGIPMERFRQHGH*ENRSGV Trigger: CACCCCAGATCTATTCTCCAAATGACCGTGTTGTCT...AAATCTTTCCATAGGAATCCCTGCTTCCCATTGCCCCCTGTAAATAGTATGCTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000096129.9 ENSMUST00000166294.9 |
||
| CDS-3UTR CAA 90 bp | AAAGCATACTATTTACAGGGGGCAATGGGAAGCAGGGATTCCTATGGAAAGATTGTCCACCAGACCTCATaGTGGGAGTCCATAATGAAA | + |
|
Preference number: 5 (lower is better) Translates to: KAYYLQGAMGSRDSYGKIVHQTS*WESIMK Trigger: TTTCATTATGGACTCCCACAATGAGGTCTGGTGGAC...AATCTTTCCATAGGAATCCCTGCTTCCCATTGCCCCCTGTAAATAGTATGCTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000096129.9 ENSMUST00000166294.9 |
||
| CDS-3UTR CAA 90 bp | CTATTTACAGGGGGCAATGGGAAGCAGGGATTCCTATGGAAAGATTTGGTCCCTTCAAAATCTGAGTCCTaGTTTCATCTTCCGTTGAAG | + |
|
Preference number: 5 (lower is better) Translates to: LFTGGNGKQGFLWKDLVPSKSES*FHLPLK Trigger: CTTCAACGGAAGATGAAACAAGGACTCAGATTTTGA...AGGGACCAAATCTTTCCATAGGAATCCCTGCTTCCCATTGCCCCCTGTAAATAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000096129.9 ENSMUST00000166294.9 |
||
| CDS-3UTR CAA 90 bp | CATATTAATTTAGGGGAGGTAAGAACTTTGACAACTATATACAGAGAGCCAGGATGCACTAAAATGACGTaGATGTTGCCCCGGGAGGCC | + |
|
Preference number: 5 (lower is better) Translates to: HINLGEVRTLTTIYREPGCTKMT*MLPREA Trigger: GGCCTCCCGGGGCAACATCAACGTCATTTTAGTGCA...TCCTGGCTCTCTGTATATAGTTGTCAAAGTTCTTACCTCCCCTAAATTAATATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000023156.13 |
||
| CDS-3UTR CAA 90 bp | TTTCTCTCACCTTCTGGCCCTTGGAGGAATTTGAACTCAACATCTAATTTCAGAGGGTCGGGTGCCATTTaGTATCCACTGACTTTCAGA | + |
|
Preference number: 5 (lower is better) Translates to: FLSPSGPWRNLNSTSNFRGSGAI*YPLTFR Trigger: TCTGAAAGTCAGTGGATACAAAATGGCACCCGACCC...TCTGAAATTAGATGTTGAGTTCAAATTCCTCCAAGGGCCAGAAGGTGAGAGAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096129.9 |
||
| CDS-3UTR CAA 90 bp | TTTCTCTCACCTTCTGGCCCTTGGAGGAATTTGAACTCAACATCTAATTTCAGACTTTGCTGCAGTAAGTaGTGTTCCTCAACATGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: FLSPSGPWRNLNSTSNFRLCCSK*CSSTCR Trigger: CCTGCATGTTGAGGAACACAACTTACTGCAGCAAAG...TCTGAAATTAGATGTTGAGTTCAAATTCCTCCAAGGGCCAGAAGGTGAGAGAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000096129.9 ENSMUST00000166294.9 |
||
| CDS-3UTR CAA 90 bp | AAGTACTCTTTACTGGCCCACATCACAAGGAGACACCAGTTCCTAGCTACCTTTTCAAAATCTGAGTCCTaGTTTCATCTTCCGTTGAAG | + |
|
Preference number: 5 (lower is better) Translates to: KYSLLAHITRRHQFLATFSKSES*FHLPLK Trigger: CTTCAACGGAAGATGAAACAAGGACTCAGATTTTGA...AAAGGTAGCTAGGAACTGGTGTCTCCTTGTGATGTGGGCCAGTAAAGAGTACTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000096129.9 ENSMUST00000166294.9 |
||
| CDS-3UTR CAA 90 bp | AGTGGGAGTTCTAGTCAAACAGATGAAATGAAGGCTTTCCATGCATGTCTTAACTTGGAGCCAGAATGTTaGGACTTTTCTCCCTTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: SGSSSQTDEMKAFHACLNLEPEC*DFSPFQ Trigger: CTGGAAGGGAGAAAAGTCCAAACATTCTGGCTCCAA...GTTAAGACATGCATGGAAAGCCTTCATTTCATCTGTTTGACTAGAACTCCCACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096129.9 |
||
| CDS TCA 90 bp | CATGTTCAATATACATCTTGTGCACTGGGAATCTCATGGCAGAATTaGAACAGCTGTCCTTCTGAACAACTTCCAGGGGAAATGCAACTT | + |
|
Preference number: 5 (lower is better) Translates to: HVQYTSCALGISWQN*NSCPSEQLPGEMQL Trigger: AAGTTGCATTTCCCCTGGAAGTTGTTCAGAAGGACAGCTGTTTCAATTCTGCCATGAGATTCCCAGTGCACAAGATGTATATTGAACATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000023156.13 ENSMUST00000096129.9 ENSMUST00000166294.9 ENSMUST00000174171.2 ENSMUST00000174202.8 |
||
| CDS TCA 90 bp | AAGGGGATGAAAAAGCTCAAGTTCATGCCCTCGGGTAGTACATTATaGAAGTCCACTATTTCAGTACAACCCTTATACCAAGTGACCGAT | + |
|
Preference number: 5 (lower is better) Translates to: KGMKKLKFMPSGSTL*KSTISVQPLYQVTD Trigger: ATCGGTCACTTGGTATAAGGGTTGTACTGAAATAGTGGACTTTCATAATGTACTACCCGAGGGCATGAACTTGAGCTTTTTCATCCCCTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000023156.13 ENSMUST00000096129.9 ENSMUST00000166294.9 ENSMUST00000174171.2 ENSMUST00000174202.8 |
||
| CDS-3UTR CAA 90 bp | ATTATCATAAATACAAGTGTGTGTCCCCCTCTCTCTGCTGTTCTATTTGAAGCACTTTGCTGCAGTAAGTaGTGTTCCTCAACATGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: IIINTSVCPPLSAVLFEALCCSK*CSSTCR Trigger: CCTGCATGTTGAGGAACACAACTTACTGCAGCAAAG...TGCTTCAAATAGAACAGCAGAGAGAGGGGGACACACACTTGTATTTATGATAAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023156.13 |
||
| CDS-3UTR CAA 90 bp | GTTTTGAAACTTGTGAAAGAAATTGCACAAGTTGCCACGCAGAAGCTGATTCAGTCGAAGATGCACAGCTaGTATCCAAACTCATTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: VLKLVKEIAQVATQKLIQSKMHS*YPNSFS Trigger: GGAGAATGAGTTTGGATACAAGCTGTGCATCTTCGA...CTGAATCAGCTTCTGCGTGGCAACTTGTGCAATTTCTTTCACAAGTTTCAAAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000096129.9 ENSMUST00000166294.9 |
||
| CDS CCA 90 bp | ATGAAAGTCCACTATTTCAGTACAACCCTTATACCAAGTGACCGATaGTTTGACACTGGAAGGAAAGTATCCGTCTACATTTGGACATGT | + |
|
Preference number: 5 (lower is better) Translates to: MKVHYFSTTLIPSDR*FDTGRKVSVYIWTC Trigger: ACATGTCCAAATGTAGACGGATACTTTCCTTCCAGTGTCAAACCATCGGTCACTTGGTATAAGGGTTGTACTGAAATAGTGGACTTTCAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000023156.13 ENSMUST00000096129.9 ENSMUST00000166294.9 ENSMUST00000174171.2 ENSMUST00000174202.8 |
||
| CDS-3UTR CAA 90 bp | GATTTTCTTCAAGCAACATTTAGAAACAAAGGCGTTGACAACATCGGAACCAGCCTCATCTTCAAACACTaGGATTTGTCGCATGGTATC | + |
|
Preference number: 5 (lower is better) Translates to: DFLQATFRNKGVDNIGTSLIFKH*DLSHGI Trigger: GATACCATGCGACAAATCCAAGTGTTTGAAGATGAG...GCTGGTTCCGATGTTGTCAACGCCTTTGTTTCTAAATGTTGCTTGAAGAAAATC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174202.8 |
||
| CDS-3UTR CAA 90 bp | GGAAGGAATCAATTGGTTGGGATATGTGTTAGGGGCAAGACTCAGAGAGAAATTTCAAAATCTGAGTCCTaGTTTCATCTTCCGTTGAAG | + |
|
Preference number: 5 (lower is better) Translates to: GRNQLVGICVRGKTQREISKSES*FHLPLK Trigger: CTTCAACGGAAGATGAAACAAGGACTCAGATTTTGA...AATTTCTCTCTGAGTCTTGCCCCTAACACATATCCCAACCAATTGATTCCTTCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000174202.8 |
||
| CDS-3UTR CAA 90 bp | ATTATCATAAATACAAGTGTGTGTCCCCCTCTCTCTGCTGTTCTATTTGAAGCATCGAAGATGCACAGCTaGTATCCAAACTCATTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: IIINTSVCPPLSAVLFEASKMHS*YPNSFS Trigger: GGAGAATGAGTTTGGATACAAGCTGTGCATCTTCGA...TGCTTCAAATAGAACAGCAGAGAGAGGGGGACACACACTTGTATTTATGATAAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023156.13 |
||
| CDS-3UTR CAA 90 bp | AAGAAACAAAGTCCTTCTTTGTTCAACACTACAGCCTGTTCTCATGTCTTAAGATTGGAGCCAGAATGTTaGGACTTTTCTCCCTTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: KKQSPSLFNTTACSHVLRLEPEC*DFSPFQ Trigger: CTGGAAGGGAGAAAAGTCCAAACATTCTGGCTCCAA...TCTTAAGACATGAGAACAGGCTGTAGTGTTGAACAAAGAAGGACTTTGTTTCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173136.2 |
||
| CDS TCA 90 bp | ACACTGGAAGGAAAGTATCCGTCTACATTTGGACATGTGATCTTATaGATGCCATGTTCAATATACATCTTGTGCACTGGGAATCTCATG | + |
|
Preference number: 5 (lower is better) Translates to: TLEGKYPSTFGHVIL*MPCSIYILCTGNLM Trigger: CATGAGATTCCCAGTGCACAAGATGTATATTGAACATGGCATTCATAAGATCACATGTCCAAATGTAGACGGATACTTTCCTTCCAGTGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000023156.13 ENSMUST00000096129.9 ENSMUST00000166294.9 ENSMUST00000174171.2 ENSMUST00000174202.8 |
||
| CDS CCA 90 bp | ACATGTGATCTTATGAATGCCATGTTCAATATACATCTTGTGCACTaGGAATCTCATGGCAGAATTGAAACAGCTGTCCTTCTGAACAAC | + |
|
Preference number: 5 (lower is better) Translates to: TCDLMNAMFNIHLVH*ESHGRIETAVLLNN Trigger: GTTGTTCAGAAGGACAGCTGTTTCAATTCTGCCATGAGATTCCCAGTGCACAAGATGTATATTGAACATGGCATTCATAAGATCACATGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000023156.13 ENSMUST00000096129.9 ENSMUST00000166294.9 ENSMUST00000174171.2 ENSMUST00000174202.8 |
||
| CDS CCA 90 bp | AGTGACCGATGGTTTGACACTGGAAGGAAAGTATCCGTCTACATTTaGACATGTGATCTTATGAATGCCATGTTCAATATACATCTTGTG | + |
|
Preference number: 5 (lower is better) Translates to: SDRWFDTGRKVSVYI*TCDLMNAMFNIHLV Trigger: CACAAGATGTATATTGAACATGGCATTCATAAGATCACATGTCCAAATGTAGACGGATACTTTCCTTCCAGTGTCAAACCATCGGTCACT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000023156.13 ENSMUST00000096129.9 ENSMUST00000166294.9 ENSMUST00000174171.2 ENSMUST00000174202.8 |
||
| CDS-3UTR CAA 90 bp | GGTAAGAACTTTGACAACTATATACAGAGAGCCAGGAATTCACAAATGGAACAGCTCATCTTCAAACACTaGGATTTGTCGCATGGTATC | + |
|
Preference number: 5 (lower is better) Translates to: GKNFDNYIQRARNSQMEQLIFKH*DLSHGI Trigger: GATACCATGCGACAAATCCAAGTGTTTGAAGATGAG...CTGTTCCATTTGTGAATTCCTGGCTCTCTGTATATAGTTGTCAAAGTTCTTACC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023156.13 |
||
| CDS-3UTR CAA 90 bp | CATCCTGAGAGGTACTGGTATTGGTTTGTCCATTTTTATGAAAAACCTAATAAGCTTTGCTGCAGTAAGTaGTGTTCCTCAACATGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: HPERYWYWFVHFYEKPNKLCCSK*CSSTCR Trigger: CCTGCATGTTGAGGAACACAACTTACTGCAGCAAAG...CTTATTAGGTTTTTCATAAAAATGGACAAACCAATACCAGTACCTCTCAGGATG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000174202.8 |
||
| CDS-3UTR CAA 90 bp | CATATTAATTTAGGGGAGGTAAGAACTTTGACAACTATATACAGAGAGCCAGGACAAGTGACCGATGGTTaGACACTGGAAGGAAAGTAT | + |
|
Preference number: 5 (lower is better) Translates to: HINLGEVRTLTTIYREPGQVTDG*TLEGKY Trigger: ATACTTTCCTTCCAGTGTCAAACCATCGGTCACTTG...TCCTGGCTCTCTGTATATAGTTGTCAAAGTTCTTACCTCCCCTAAATTAATATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023156.13 |
||
| CDS-3UTR CAA 90 bp | AGTTCTCATTATCATAAATACAAGTGTGTGTCCCCCTCTCTCTGCTGTTCTATTATGTCCTTCACAGCTTaGTACTGCACTAAAATGACG | + |
|
Preference number: 5 (lower is better) Translates to: SSHYHKYKCVSPSLCCSIMSFTA*YCTKMT Trigger: CGTCATTTTAGTGCAGTACAAAGCTGTGAAGGACAT...AATAGAACAGCAGAGAGAGGGGGACACACACTTGTATTTATGATAATGAGAACT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023156.13 |
||
| CDS-3UTR CAA 90 bp | AACCAGCATACTGATCATTATCACAAAGATGGAAGCTTTCTCTTAGGATTTTTCCAAGTGACCGATGGTTaGACACTGGAAGGAAAGTAT | + |
|
Preference number: 5 (lower is better) Translates to: NQHTDHYHKDGSFLLGFFQVTDG*TLEGKY Trigger: ATACTTTCCTTCCAGTGTCAAACCATCGGTCACTTG...GAAAAATCCTAAGAGAAAGCTTCCATCTTTGTGATAATGATCAGTATGCTGGTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000174202.8 |
||
| CDS-3UTR CAA 90 bp | TTTCTCTCACCTTCTGGCCCTTGGAGGAATTTGAACTCAACATCTAATTTCAGACCTTTCCATCAAGAATaGTTTCATCTGTTCCAAAGT | + |
|
Preference number: 5 (lower is better) Translates to: FLSPSGPWRNLNSTSNFRPFHQE*FHLFQS Trigger: ACTTTGGAACAGATGAAACAATTCTTGATGGAAAGG...TCTGAAATTAGATGTTGAGTTCAAATTCCTCCAAGGGCCAGAAGGTGAGAGAAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000096129.9 ENSMUST00000166294.9 |
||
| CDS-3UTR CAA 90 bp | AATCATTCTTTTGGAATAGTAATGCCAAAAGGAAACTCAGTACCTCTCACCTCCCCTTTCCATCAAGAATaGTTTCATCTGTTCCAAAGT | + |
|
Preference number: 5 (lower is better) Translates to: NHSFGIVMPKGNSVPLTSPFHQE*FHLFQS Trigger: ACTTTGGAACAGATGAAACAATTCTTGATGGAAAGG...GGAGGTGAGAGGTACTGAGTTTCCTTTTGGCATTACTATTCCAAAAGAATGATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000023156.13 |
||
| CDS-3UTR CAA 90 bp | ACAAGTACCGACCTGTCTATCTGTAGACAGATGAGAAATTACTATGATAAAACATCAAAATCTGAGTCCTaGTTTCATCTTCCGTTGAAG | + |
|
Preference number: 5 (lower is better) Translates to: TSTDLSICRQMRNYYDKTSKSES*FHLPLK Trigger: CTTCAACGGAAGATGAAACAAGGACTCAGATTTTGA...TGTTTTATCATAGTAATTTCTCATCTGTCTACAGATAGACAGGTCGGTACTTGT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023156.13 |
||
| CDS GCA 72 bp | ACACAGCAGCGACAGGCTGCTGAGGGTTTCCCTCGGTaGTTGGACATCGTGCCCGGGGCTGGCTCTGCTCCA | + |
|
Preference number: 6 (lower is better) Translates to: TQQRQAAEGFPR*LDIVPGAGSAP Trigger: TGGAGCAGAGCCAGCCCCGGGCACGATGTCCAAGCACCGAGGGAAACCCTCAGCAGCCTGTCGCTGCTGTGT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000096129.9 ENSMUST00000166294.9 ENSMUST00000173136.2 |
||
| CDS CCA 72 bp | AGCAGCGACAGGCTGCTGAGGGTTTCCCTCGGTGCTTaGACATCGTGCCCGGGGCTGGCTCTGCTCCAGACA | + |
|
Preference number: 6 (lower is better) Translates to: SSDRLLRVSLGA*TSCPGLALLQT Trigger: TGTCTGGAGCAGAGCCAGCCCCGGGCACGATGTCCAAGCACCGAGGGAAACCCTCAGCAGCCTGTCGCTGCT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000096129.9 ENSMUST00000166294.9 ENSMUST00000173136.2 |
||
| CDS TCA 72 bp | TCCTTCACAGTAGGTGACACAGCAGCGACAGGCTGCTaGGGGTTTCCCTCGGTGCTTGGACATCGTGCCCGG | + |
|
Preference number: 6 (lower is better) Translates to: SFTVGDTAATGC*GFPSVLGHRAR Trigger: CCGGGCACGATGTCCAAGCACCGAGGGAAACCCTCAGCAGCCTGTCGCTGCTGTGTCACCTACTGTGAAGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000096129.9 ENSMUST00000166294.9 ENSMUST00000173136.2 |
||
| CDS GCA 72 bp | AGGCGGAAGTTAATGGGCTCCTCCAGGTCCCGGTCTTaGCTGGTCCAGTACCAGATCAGGGTAAGGCCAGAG | + |
|
Preference number: 6 (lower is better) Translates to: RRKLMGSSRSRS*LVQYQIRVRPE Trigger: CTCTGGCCTTACCCTGATCTGGTACTGGACCAGGCAAGACCGGGACCTGGAGGAGCCCATTAACTTCCGCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000023156.13 ENSMUST00000096129.9 ENSMUST00000166294.9 ENSMUST00000174171.2 ENSMUST00000174202.8 |
||
| CDS CAA 72 bp | GAGGCGGAAGTTAATGGGCTCCTCCAGGTCCCGGTCTaGCCTGGTCCAGTACCAGATCAGGGTAAGGCCAGA | + |
|
Preference number: 6 (lower is better) Translates to: EAEVNGLLQVPV*PGPVPDQGKAR Trigger: TCTGGCCTTACCCTGATCTGGTACTGGACCAGGCAAGACCGGGACCTGGAGGAGCCCATTAACTTCCGCCTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000023156.13 ENSMUST00000096129.9 ENSMUST00000166294.9 ENSMUST00000174171.2 ENSMUST00000174202.8 |
||
| CDS CAA 90 bp | ATTCTCTGGGAGGCGGAAGTTAATGGGCTCCTCCAGGTCCCGGTCTaGCCTGGTCCAGTACCAGATCAGGGTAAGGCCAGAGGAATGGGC | + |
|
Preference number: 6 (lower is better) Translates to: ILWEAEVNGLLQVPV*PGPVPDQGKARGMG Trigger: GCCCATTCCTCTGGCCTTACCCTGATCTGGTACTGGACCAGGCAAGACCGGGACCTGGAGGAGCCCATTAACTTCCGCCTCCCAGAGAAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000023156.13 ENSMUST00000096129.9 ENSMUST00000166294.9 ENSMUST00000174171.2 ENSMUST00000174202.8 |
||
| CDS GCA 72 bp | CCCTTCCAGCTTACAAAAGACACAGACTCCTTCAGCTaGATGATGCCTGGATGGGGTTGCTCAAGCGGACGG | + |
|
Preference number: 6 (lower is better) Translates to: PFQLTKDTDSFS*MMPGWGCSSGR Trigger: CCGTCCGCTTGAGCAACCCCATCCAGGCATCATGCAGCTGAAGGAGTCTGTGTCTTTTGTAAGCTGGAAGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000096129.9 ENSMUST00000166294.9 ENSMUST00000173136.2 |
||
| CDS CCA 72 bp | CCAGAGCACATCTTTCTCCTTACTGATGCGATTCTCTaGGAGGCGGAAGTTAATGGGCTCCTCCAGGTCCCG | + |
|
Preference number: 6 (lower is better) Translates to: PEHIFLLTDAIL*EAEVNGLLQVP Trigger: CGGGACCTGGAGGAGCCCATTAACTTCCGCCTCCCAGAGAATCGCATCAGTAAGGAGAAAGATGTGCTCTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000023156.13 ENSMUST00000096129.9 ENSMUST00000166294.9 ENSMUST00000174171.2 ENSMUST00000174202.8 |
||
| CDS CAA 72 bp | CACAGACTCCTTCAGCTGCATGATGCCTGGATGGGGTaGCTCAAGCGGACGGTACTCCACCACAATGAGCTT | + |
|
Preference number: 6 (lower is better) Translates to: HRLLQLHDAWMG*LKRTVLHHNEL Trigger: AAGCTCATTGTGGTGGAGTACCGTCCGCTTGAGCAACCCCATCCAGGCATCATGCAGCTGAAGGAGTCTGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000096129.9 ENSMUST00000166294.9 ENSMUST00000173136.2 |
||
| CDS CAA 90 bp | GGGTTCGGGTCGGGTGCCATTTTGTATCCACTGACTTTCAGACTCTaGGAGAGGAGGCTTACAGAGGTGTGTTTCCCACTGGGGATGCGT | + |
|
Preference number: 6 (lower is better) Translates to: GFGSGAILYPLTFRL*ERRLTEVCFPLGMR Trigger: ACGCATCCCCAGTGGGAAACACACCTCTGTAAGCCTCCTCTCCAAGAGTCTGAAAGTCAGTGGATACAAAATGGCACCCGACCCGAACCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000096129.9 |
||
| CDS GCA 72 bp | ACAGACTCCTTCAGCTGCATGATGCCTGGATGGGGTTaGTCAAGCGGACGGTACTCCACCACAATGAGCTTA | + |
|
Preference number: 6 (lower is better) Translates to: TDSFSCMMPGWG*SSGRYSTTMSL Trigger: TAAGCTCATTGTGGTGGAGTACCGTCCGCTTGAGCAACCCCATCCAGGCATCATGCAGCTGAAGGAGTCTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000096129.9 ENSMUST00000166294.9 ENSMUST00000173136.2 |
||
| CDS GCA 72 bp | CAAGAGCTGAGATCTGGGGAGCGGGTTCGGGTCGGGTaGCATTTTGTATCCACTGACTTTCAGACTCTTGGA | + |
|
Preference number: 6 (lower is better) Translates to: QELRSGERVRVG*HFVSTDFQTLG Trigger: TCCAAGAGTCTGAAAGTCAGTGGATACAAAATGGCACCCGACCCGAACCCGCTCCCCAGATCTCAGCTCTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000096129.9 |
||
| CDS CCA 72 bp | AAAGACACAGACTCCTTCAGCTGCATGATGCCTGGATaGGGTTGCTCAAGCGGACGGTACTCCACCACAATG | + |
|
Preference number: 6 (lower is better) Translates to: KDTDSFSCMMPG*GCSSGRYSTTM Trigger: CATTGTGGTGGAGTACCGTCCGCTTGAGCAACCCCATCCAGGCATCATGCAGCTGAAGGAGTCTGTGTCTTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000096129.9 ENSMUST00000166294.9 ENSMUST00000173136.2 |
||
| CDS CCA 72 bp | TACAAAAGACACAGACTCCTTCAGCTGCATGATGCCTaGATGGGGTTGCTCAAGCGGACGGTACTCCACCAC | + |
|
Preference number: 6 (lower is better) Translates to: YKRHRLLQLHDA*MGLLKRTVLHH Trigger: GTGGTGGAGTACCGTCCGCTTGAGCAACCCCATCCAGGCATCATGCAGCTGAAGGAGTCTGTGTCTTTTGTA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000096129.9 ENSMUST00000166294.9 ENSMUST00000173136.2 |
||
| CDS CCA 72 bp | AAATCTGTAAAGTGGCGGAGTGCAAGAGCTGAGATCTaGGGAGCGGGTTCGGGTCGGGTGCCATTTTGTATC | + |
|
Preference number: 6 (lower is better) Translates to: KSVKWRSARAEI*GAGSGRVPFCI Trigger: GATACAAAATGGCACCCGACCCGAACCCGCTCCCCAGATCTCAGCTCTTGCACTCCGCCACTTTACAGATTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096129.9 |
||
| CDS TCA 72 bp | TGGAGAATAGATCTGGGGTGGCAATGCATCCTTTGGTaGGCCCACCACCTTTACAGTCACAGTCCTGGTGAG | + |
|
Preference number: 6 (lower is better) Translates to: WRIDLGWQCILW*AHHLYSHSPGE Trigger: CTCACCAGGACTGTGACTGTAAAGGTGGTGGGCTCACCAAAGGATGCATTGCCACCCCAGATCTATTCTCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000023156.13 ENSMUST00000096129.9 ENSMUST00000166294.9 ENSMUST00000174171.2 ENSMUST00000174202.8 |
||
| CDS TCA 72 bp | TCCAGCTTACAAAAGACACAGACTCCTTCAGCTGCATaGTGCCTGGATGGGGTTGCTCAAGCGGACGGTACT | + |
|
Preference number: 6 (lower is better) Translates to: SSLQKTQTPSAA*CLDGVAQADGT Trigger: AGTACCGTCCGCTTGAGCAACCCCATCCAGGCATCATGCAGCTGAAGGAGTCTGTGTCTTTTGTAAGCTGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000096129.9 ENSMUST00000166294.9 ENSMUST00000173136.2 |
||
| CDS CCA 72 bp | GAGCCGGCTCATCTTCAAACACTTGGATTTGTCGCATaGTATCTAGTCCCCAGTCATCACAGCGCTCCGAAG | + |
|
Preference number: 6 (lower is better) Translates to: EPAHLQTLGFVA*YLVPSHHSAPK Trigger: CTTCGGAGCGCTGTGATGACTGGGGACTAGATACCATGCGACAAATCCAAGTGTTTGAAGATGAGCCGGCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000023156.13 ENSMUST00000096129.9 ENSMUST00000166294.9 ENSMUST00000174171.2 ENSMUST00000174202.8 |
||
| CDS CAA 90 bp | TACAAAAGACACAGACTCCTTCAGCTGCATGATGCCTGGATGGGGTaGCTCAAGCGGACGGTACTCCACCACAATGAGCTTAGTGGCAAT | + |
|
Preference number: 6 (lower is better) Translates to: YKRHRLLQLHDAWMG*LKRTVLHHNELSGN Trigger: ATTGCCACTAAGCTCATTGTGGTGGAGTACCGTCCGCTTGAGCAACCCCATCCAGGCATCATGCAGCTGAAGGAGTCTGTGTCTTTTGTA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000096129.9 ENSMUST00000166294.9 ENSMUST00000173136.2 |
||
| CDS CCA 72 bp | GGCTCCAAAACCACAGGCGAGTTCTACTGTGTACCTTaGTGGTATGACTTTCTGTTTCACCTTGGCAGCCTG | + |
|
Preference number: 6 (lower is better) Translates to: GSKTTGEFYCVP*WYDFLFHLGSL Trigger: CAGGCTGCCAAGGTGAAACAGAAAGTCATACCACCAAGGTACACAGTAGAACTCGCCTGTGGTTTTGGAGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023156.13 ENSMUST00000096129.9 ENSMUST00000166294.9 |
||
| CDS TCA 72 bp | GAGCCCACCACCTTTACAGTCACAGTCCTGGTGAGGTaGAAGAGACGTCCGTTTTCAGGATATGTAACCACA | + |
|
Preference number: 6 (lower is better) Translates to: EPTTFTVTVLVR*KRRPFSGYVTT Trigger: TGTGGTTACATATCCTGAAAACGGACGTCTCTTTCACCTCACCAGGACTGTGACTGTAAAGGTGGTGGGCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000023156.13 ENSMUST00000096129.9 ENSMUST00000166294.9 ENSMUST00000174171.2 ENSMUST00000174202.8 |
||
| CDS TCA 72 bp | AACCACAGGCGAGTTCTACTGTGTACCTTGGTGGTATaGCTTTCTGTTTCACCTTGGCAGCCTGCTCAGCTT | + |
|
Preference number: 6 (lower is better) Translates to: NHRRVLLCTLVV*LSVSPWQPAQL Trigger: AAGCTGAGCAGGCTGCCAAGGTGAAACAGAAAGTCATACCACCAAGGTACACAGTAGAACTCGCCTGTGGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023156.13 ENSMUST00000096129.9 ENSMUST00000166294.9 |
||
| CDS CCA 72 bp | GGGCACTTGATTCGAGCCGGCTCATCTTCAAACACTTaGATTTGTCGCATGGTATCTAGTCCCCAGTCATCA | + |
|
Preference number: 6 (lower is better) Translates to: GHLIRAGSSSNT*ICRMVSSPQSS Trigger: TGATGACTGGGGACTAGATACCATGCGACAAATCCAAGTGTTTGAAGATGAGCCGGCTCGAATCAAGTGCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000023156.13 ENSMUST00000096129.9 ENSMUST00000166294.9 ENSMUST00000174171.2 ENSMUST00000174202.8 |
||
| CDS CCA 72 bp | TCCAAAACCACAGGCGAGTTCTACTGTGTACCTTGGTaGTATGACTTTCTGTTTCACCTTGGCAGCCTGCTC | + |
|
Preference number: 6 (lower is better) Translates to: SKTTGEFYCVPW*YDFLFHLGSLL Trigger: GAGCAGGCTGCCAAGGTGAAACAGAAAGTCATACCACCAAGGTACACAGTAGAACTCGCCTGTGGTTTTGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023156.13 ENSMUST00000096129.9 ENSMUST00000166294.9 |
||
| CDS CCA 72 bp | TACTCCACCACAATGAGCTTAGTGGCAATGGAGTTCTaGCACATGACACCCAGCTTAAACTCCAGCATGCTG | + |
|
Preference number: 6 (lower is better) Translates to: YSTTMSLVAMEF*HMTPSLNSSML Trigger: CAGCATGCTGGAGTTTAAGCTGGGTGTCATGTGCCAGAACTCCATTGCCACTAAGCTCATTGTGGTGGAGTA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000096129.9 ENSMUST00000166294.9 ENSMUST00000173136.2 |
||
| CDS CAA 72 bp | TCGGGTGCCATTTTGTATCCACTGACTTTCAGACTCTaGGAGAGGAGGCTTACAGAGGTGTGTTTCCCACTG | + |
|
Preference number: 6 (lower is better) Translates to: SGAILYPLTFRL*ERRLTEVCFPL Trigger: CAGTGGGAAACACACCTCTGTAAGCCTCCTCTCCAAGAGTCTGAAAGTCAGTGGATACAAAATGGCACCCGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096129.9 |
||
| CDS TCA 72 bp | GGACCATCTCCAGCCAGTAAACATGGTAAACCACAATaGGAACCACTACCAGAAAGACCGTGGCTCCAAAAC | + |
|
Preference number: 6 (lower is better) Translates to: GPSPASKHGKPQ*EPLPERPWLQN Trigger: GTTTTGGAGCCACGGTCTTTCTGGTAGTGGTTCTCATTGTGGTTTACCATGTTTACTGGCTGGAGATGGTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000023156.13 ENSMUST00000096129.9 ENSMUST00000166294.9 ENSMUST00000174171.2 |
||
| CDS TCA 72 bp | GGCTCAGGACAACAATCATCCTTCGGCTCCTCTGAATaGAATCAAAAACTGCTTCCACGGTATTTCCCCCAG | + |
|
Preference number: 6 (lower is better) Translates to: GSGQQSSFGSSE*NQKLLPRYFPQ Trigger: CTGGGGGAAATACCGTGGAAGCAGTTTTTGATTTCATTCAGAGGAGCCGAAGGATGATTGTTGTCCTGAGCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000096129.9 ENSMUST00000166294.9 |
||
| CDS GCA 72 bp | AATCATCCTTCGGCTCCTCTGAATGAAATCAAAAACTaGTTCCACGGTATTTCCCCCAGGCAGGCTGTCTCT | + |
|
Preference number: 6 (lower is better) Translates to: NHPSAPLNEIKN*FHGISPRQAVS Trigger: AGAGACAGCCTGCCTGGGGGAAATACCGTGGAAGCAGTTTTTGATTTCATTCAGAGGAGCCGAAGGATGATT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000096129.9 ENSMUST00000166294.9 |
||
| CDS TCA 72 bp | GGGAATCTCATGGCAGAATTGAAACAGCTGTCCTTCTaGACAACTTCCAGGGGAAATGCAACTTTGCTGCAG | + |
|
Preference number: 6 (lower is better) Translates to: GNLMAELKQLSF*TTSRGNATLLQ Trigger: CTGCAGCAAAGTTGCATTTCCCCTGGAAGTTGTTCAGAAGGACAGCTGTTTCAATTCTGCCATGAGATTCCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000023156.13 ENSMUST00000096129.9 ENSMUST00000166294.9 ENSMUST00000174171.2 ENSMUST00000174202.8 |
||
| CDS CCA 72 bp | CTCTCCTGGTTCTTTCTCATAGACAACACGGTCATTTaGAGAATAGATCTGGGGTGGCAATGCATCCTTTGG | + |
|
Preference number: 6 (lower is better) Translates to: LSWFFLIDNTVI*RIDLGWQCILW Trigger: CCAAAGGATGCATTGCCACCCCAGATCTATTCTCCAAATGACCGTGTTGTCTATGAGAAAGAACCAGGAGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000023156.13 ENSMUST00000096129.9 ENSMUST00000166294.9 ENSMUST00000174171.2 ENSMUST00000174202.8 |
||
| CDS TCA 72 bp | CTTTCAAACGACTTCTCCTCTGAACATGATCCAGACTaGTGTCAGACTGAGAAGAACAGCTCTCATTCCAGC | + |
|
Preference number: 6 (lower is better) Translates to: LSNDFSSEHDPD*CQTEKNSSHSS Trigger: GCTGGAATGAGAGCTGTTCTTCTCAGTCTGACATCAGTCTGGATCATGTTCAGAGGAGAAGTCGTTTGAAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000096129.9 ENSMUST00000166294.9 ENSMUST00000173136.2 |
||
| CDS TCA 72 bp | AACCACAGGCGAGTTCTACTGTGTACCTTGGTGGTATaGCTTTCATTAATAGTGATGTCGACTGTGACGTCA | + |
|
Preference number: 6 (lower is better) Translates to: NHRRVLLCTLVV*LSLIVMSTVTS Trigger: TGACGTCACAGTCGACATCACTATTAATGAAAGTCATACCACCAAGGTACACAGTAGAACTCGCCTGTGGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174171.2 |
||
| CDS CAA 90 bp | AAGTCCACTATTTCAGTACAACCCTTATACCAAGTGACCGATGGTTaGACACTGGAAGGAAAGTATCCGTCTACATTTGGACATGTGATC | + |
|
Preference number: 6 (lower is better) Translates to: KSTISVQPLYQVTDG*TLEGKYPSTFGHVI Trigger: GATCACATGTCCAAATGTAGACGGATACTTTCCTTCCAGTGTCAAACCATCGGTCACTTGGTATAAGGGTTGTACTGAAATAGTGGACTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000023156.13 ENSMUST00000096129.9 ENSMUST00000166294.9 ENSMUST00000174171.2 ENSMUST00000174202.8 |
||
| CDS CCA 72 bp | CACTATTTCAGTACAACCCTTATACCAAGTGACCGATaGTTTGACACTGGAAGGAAAGTATCCGTCTACATT | + |
|
Preference number: 6 (lower is better) Translates to: HYFSTTLIPSDR*FDTGRKVSVYI Trigger: AATGTAGACGGATACTTTCCTTCCAGTGTCAAACCATCGGTCACTTGGTATAAGGGTTGTACTGAAATAGTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000023156.13 ENSMUST00000096129.9 ENSMUST00000166294.9 ENSMUST00000174171.2 ENSMUST00000174202.8 |
||
| CDS TCA 72 bp | GGAAAGTATCCGTCTACATTTGGACATGTGATCTTATaGATGCCATGTTCAATATACATCTTGTGCACTGGG | + |
|
Preference number: 6 (lower is better) Translates to: GKYPSTFGHVIL*MPCSIYILCTG Trigger: CCCAGTGCACAAGATGTATATTGAACATGGCATTCATAAGATCACATGTCCAAATGTAGACGGATACTTTCC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000023156.13 ENSMUST00000096129.9 ENSMUST00000166294.9 ENSMUST00000174171.2 ENSMUST00000174202.8 |
||
| CDS CCA 72 bp | CTTATGAATGCCATGTTCAATATACATCTTGTGCACTaGGAATCTCATGGCAGAATTGAAACAGCTGTCCTT | + |
|
Preference number: 6 (lower is better) Translates to: LMNAMFNIHLVH*ESHGRIETAVL Trigger: AAGGACAGCTGTTTCAATTCTGCCATGAGATTCCCAGTGCACAAGATGTATATTGAACATGGCATTCATAAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000023156.13 ENSMUST00000096129.9 ENSMUST00000166294.9 ENSMUST00000174171.2 ENSMUST00000174202.8 |
||
| CDS TCA 72 bp | AGGATATGTAACCACACATGTGTAATTTCCGTTATTTaGAACCAAGGGGATGAAAAAGCTCAAGTTCATGCC | + |
|
Preference number: 6 (lower is better) Translates to: RICNHTCVISVI*NQGDEKAQVHA Trigger: GGCATGAACTTGAGCTTTTTCATCCCCTTGGTTTCAAATAACGGAAATTACACATGTGTGGTTACATATCCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000023156.13 ENSMUST00000096129.9 ENSMUST00000166294.9 ENSMUST00000174171.2 ENSMUST00000174202.8 |
||
| CDS TCA 72 bp | CACTGGAAGGAAAGTATCCGTCTACATTTGGACATGTaGTCTTATGAATGCCATGTTCAATATACATCTTGT | + |
|
Preference number: 6 (lower is better) Translates to: HWKESIRLHLDM*SYECHVQYTSC Trigger: ACAAGATGTATATTGAACATGGCATTCATAAGATCACATGTCCAAATGTAGACGGATACTTTCCTTCCAGTG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000023156.13 ENSMUST00000096129.9 ENSMUST00000166294.9 ENSMUST00000174171.2 ENSMUST00000174202.8 |
||
| CDS CCA 72 bp | TGGTTTGACACTGGAAGGAAAGTATCCGTCTACATTTaGACATGTGATCTTATGAATGCCATGTTCAATATA | + |
|
Preference number: 6 (lower is better) Translates to: WFDTGRKVSVYI*TCDLMNAMFNI Trigger: TATATTGAACATGGCATTCATAAGATCACATGTCCAAATGTAGACGGATACTTTCCTTCCAGTGTCAAACCA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000023156.13 ENSMUST00000096129.9 ENSMUST00000166294.9 ENSMUST00000174171.2 ENSMUST00000174202.8 |
||