Pregenerated sensors for IL1R2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000026073Ensembl transcript IDs: ENSMUST00000027243.13, ENSMUST00000191671.6, ENSMUST00000195770.2
Found 76 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TGCGTTTACACCGTCTGCGCATCCATATTGCCCCCACAACCAAGATaGTCAGAGACAGAGGTGCCAGCGCAATGCTCCAGGAGAACGTGG | + |
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Preference number: 1 (lower is better) Translates to: CVYTVCASILPPQPR*SETEVPAQCSRRTW Trigger: CCACGTTCTCCTGGAGCATTGCGCTGGCACCTCTGTCTCTGATCATCTTGGTTGTGGGGGCAATATGGATGCGCAGACGGTGTAAACGCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000195770.2 |
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| 3UTR TCA 90 bp | GAGGTGCCAGCGCAATGCTCCAGGAGAACGTGGAAGAGACTTCTTTaGCTGTGGTATGGAGTGACTGAGAACTCCGTGGATTCGAGGCAA | + |
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Preference number: 1 (lower is better) Translates to: EVPAQCSRRTWKRLL*LWYGVTENSVDSRQ Trigger: TTGCCTCGAATCCACGGAGTTCTCAGTCACTCCATACCACAGTCAAAGAAGTCTCTTCCACGTTCTCCTGGAGCATTGCGCTGGCACCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195770.2 |
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| 3UTR GCA 90 bp | GCGCATCCATATTGCCCCCACAACCAAGATGATCAGAGACAGAGGTaGCAGCGCAATGCTCCAGGAGAACGTGGAAGAGACTTCTTTGAC | + |
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Preference number: 1 (lower is better) Translates to: AHPYCPHNQDDQRQR*QRNAPGERGRDFFD Trigger: GTCAAAGAAGTCTCTTCCACGTTCTCCTGGAGCATTGCGCTGGCACCTCTGTCTCTGATCATCTTGGTTGTGGGGGCAATATGGATGCGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000195770.2 |
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| 3UTR GCA 90 bp | GGTTGTCAGTCCGTAGCTTGGTCAGTCCATATGTCTTTCCAGCCCTaGGTTTACACCGTCTGCGCATCCATATTGCCCCCACAACCAAGA | + |
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Preference number: 1 (lower is better) Translates to: GCQSVAWSVHMSFQP*VYTVCASILPPQPR Trigger: TCTTGGTTGTGGGGGCAATATGGATGCGCAGACGGTGTAAACGCAGGGCTGGAAAGACATATGGACTGACCAAGCTACGGACTGACAACC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000195770.2 |
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| 3UTR GCA 90 bp | ATATGTCTTTCCAGCCCTGCGTTTACACCGTCTGCGCATCCATATTaGCCCCACAACCAAGATGATCAGAGACAGAGGTGCCAGCGCAAT | + |
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Preference number: 1 (lower is better) Translates to: ICLSSPAFTPSAHPY*PHNQDDQRQRCQRN Trigger: ATTGCGCTGGCACCTCTGTCTCTGATCATCTTGGTTGTGGGGGCAATATGGATGCGCAGACGGTGTAAACGCAGGGCTGGAAAGACATAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000195770.2 |
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| 3UTR TCA 90 bp | GCTCCAGGAGAACGTGGAAGAGACTTCTTTGACTGTGGTATGGAGTaGCTGAGAACTCCGTGGATTCGAGGCAACACATTTAAAATCTGT | + |
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Preference number: 1 (lower is better) Translates to: APGERGRDFFDCGME*LRTPWIRGNTFKIC Trigger: ACAGATTTTAAATGTGTTGCCTCGAATCCACGGAGTTCTCAGTCACTCCATACCACAGTCAAAGAAGTCTCTTCCACGTTCTCCTGGAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000195770.2 |
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| 3UTR GCA 90 bp | ACCACACAATGGTGTTGGAAGATGTACCAGTTCCCAGAAACACTTTaGACGGGACTATCAGTCTTGACCCCAATGATGCTGGTATTGTCT | + |
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Preference number: 1 (lower is better) Translates to: TTQWCWKMYQFPETL*TGLSVLTPMMLVLS Trigger: AGACAATACCAGCATCATTGGGGTCAAGACTGATAGTCCCGTGCAAAGTGTTTCTGGGAACTGGTACATCTTCCAACACCATTGTGTGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000195770.2 |
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| 3UTR CCA 90 bp | AATAGCCTGCATCGTCCATGGACGTGTTGGATATCAATAGGCGTGTaGGGTCTCCTGCACTCAGAAATTCCTTATTGCCTTTATCCAAGA | + |
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Preference number: 1 (lower is better) Translates to: NSLHRPWTCWISIGV*GLLHSEIPYCLYPR Trigger: TCTTGGATAAAGGCAATAAGGAATTTCTGAGTGCAGGAGACCCCACACGCCTATTGATATCCAACACGTCCATGGACGATGCAGGCTATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195770.2 |
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| 3UTR TCA 90 bp | CAGGAGAACGTGGAAGAGACTTCTTTGACTGTGGTATGGAGTGACTaGGAACTCCGTGGATTCGAGGCAACACATTTAAAATCTGTATGC | + |
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Preference number: 1 (lower is better) Translates to: QENVEETSLTVVWSD*ELRGFEATHLKSVC Trigger: GCATACAGATTTTAAATGTGTTGCCTCGAATCCACGGAGTTCTCAGTCACTCCATACCACAGTCAAAGAAGTCTCTTCCACGTTCTCCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000195770.2 |
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| 3UTR GCA 90 bp | ATATCAATAGGCGTGTGGGGTCTCCTGCACTCAGAAATTCCTTATTaGCTTTATCCAAGAGTATGGCGCCCTTATACCACTGTATCTTTC | + |
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Preference number: 1 (lower is better) Translates to: ISIGVWGLLHSEIPY*LYPRVWRPYTTVSF Trigger: GAAAGATACAGTGGTATAAGGGCGCCATACTCTTGGATAAAGGCAATAAGGAATTTCTGAGTGCAGGAGACCCCACACGCCTATTGATAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000195770.2 |
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| 3UTR-3UTR CCA 90 bp | TGGAAGGGAAGTCCTGGTTGTCAGTCCGTAGCTTGGTCAGTCCATATGTCTTTCTTCTCTGAGTACTGGTaGTGTAGCCCCTCGGTCACA | + |
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Preference number: 2 (lower is better) Translates to: WKGSPGCQSVAWSVHMSFFSEYW*CSPSVT Trigger: TGTGACCGAGGGGCTACACCACCAGTACTCAGAGAA...GAAAGACATATGGACTGACCAAGCTACGGACTGACAACCAGGACTTCCCTTCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000195770.2 |
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| 3UTR CAA 90 bp | GCAGCCGAGATAAACGTGCTGTTAGCCAACCACCACACAATGGTGTaGGAAGATGTACCAGTTCCCAGAAACACTTTGCACGGGACTATC | + |
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Preference number: 2 (lower is better) Translates to: AAEINVLLANHHTMV*EDVPVPRNTLHGTI Trigger: GATAGTCCCGTGCAAAGTGTTTCTGGGAACTGGTACATCTTCCAACACCATTGTGTGGTGGTTGGCTAACAGCACGTTTATCTCGGCTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195770.2 |
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| 3UTR-3UTR TCA 90 bp | TTTCCTTTATTTAGTTTGGGCTGGAAGGGAAGTCCTGGTTGTCAGTCCGTAGCTTCTCCAGGGGAGAAATaGTCACAGGGATGGGTTCCG | + |
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Preference number: 2 (lower is better) Translates to: FPLFSLGWKGSPGCQSVASPGEK*SQGWVP Trigger: CGGAACCCATCCCTGTGATCATTTCTCCCCTGGAGA...AGCTACGGACTGACAACCAGGACTTCCCTTCCAGCCCAAACTAAATAAAGGAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000195770.2 |
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| 3UTR CAA 90 bp | TCCAGGGGAGAAATGATCACAGGGATGGGTTCCGTGGTTGTTCCTTaGACCCGGAGTTCAATATTCCTAGTGATGTTGTATTCCTGGCCA | + |
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Preference number: 2 (lower is better) Translates to: SRGEMITGMGSVVVP*TRSSIFLVMLYSWP Trigger: TGGCCAGGAATACAACATCACTAGGAATATTGAACTCCGGGTCAAAGGAACAACCACGGAACCCATCCCTGTGATCATTTCTCCCCTGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000195770.2 |
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| 3UTR CAA 90 bp | CACCACACAATGGTGTTGGAAGATGTACCAGTTCCCAGAAACACTTaGCACGGGACTATCAGTCTTGACCCCAATGATGCTGGTATTGTC | + |
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Preference number: 2 (lower is better) Translates to: HHTMVLEDVPVPRNT*HGTISLDPNDAGIV Trigger: GACAATACCAGCATCATTGGGGTCAAGACTGATAGTCCCGTGCAAAGTGTTTCTGGGAACTGGTACATCTTCCAACACCATTGTGTGGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000195770.2 |
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| 3UTR CAA 90 bp | GATATCAATAGGCGTGTGGGGTCTCCTGCACTCAGAAATTCCTTATaGCCTTTATCCAAGAGTATGGCGCCCTTATACCACTGTATCTTT | + |
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Preference number: 2 (lower is better) Translates to: DINRRVGSPALRNSL*PLSKSMAPLYHCIF Trigger: AAAGATACAGTGGTATAAGGGCGCCATACTCTTGGATAAAGGCAATAAGGAATTTCTGAGTGCAGGAGACCCCACACGCCTATTGATATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000195770.2 |
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| 3UTR-3UTR CCA 90 bp | TGTATGCAGATCCTCCCTTGTGACTGGATCAAAAATCAGCGACACTTCCACATAACCACACAATGGTGTTaGAAGATGTACCAGTTCCCA | + |
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Preference number: 2 (lower is better) Translates to: CMQILPCDWIKNQRHFHITTQWC*KMYQFP Trigger: TGGGAACTGGTACATCTTCCAACACCATTGTGTGGT...TATGTGGAAGTGTCGCTGATTTTTGATCCAGTCACAAGGGAGGATCTGCATACA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000195770.2 |
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| 3UTR-3UTR GCA 90 bp | TGTATGCAGATCCTCCCTTGTGACTGGATCAAAAATCAGCGACACTTCCACATATCAGAAATTCCTTATTaGCTTTATCCAAGAGTATGG | + |
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Preference number: 2 (lower is better) Translates to: CMQILPCDWIKNQRHFHISEIPY*LYPRVW Trigger: CCATACTCTTGGATAAAGGCAATAAGGAATTTCTGA...TATGTGGAAGTGTCGCTGATTTTTGATCCAGTCACAAGGGAGGATCTGCATACA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000195770.2 |
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| 3UTR TCA 72 bp | ACCGTCTGCGCATCCATATTGCCCCCACAACCAAGATaGTCAGAGACAGAGGTGCCAGCGCAATGCTCCAGG | + |
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Preference number: 3 (lower is better) Translates to: TVCASILPPQPR*SETEVPAQCSR Trigger: CCTGGAGCATTGCGCTGGCACCTCTGTCTCTGATCATCTTGGTTGTGGGGGCAATATGGATGCGCAGACGGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000195770.2 |
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| 3UTR GCA 72 bp | TCCAGCCCTGCGTTTACACCGTCTGCGCATCCATATTaGCCCCACAACCAAGATGATCAGAGACAGAGGTGC | + |
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Preference number: 3 (lower is better) Translates to: SSPAFTPSAHPY*PHNQDDQRQRC Trigger: GCACCTCTGTCTCTGATCATCTTGGTTGTGGGGGCAATATGGATGCGCAGACGGTGTAAACGCAGGGCTGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000195770.2 |
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| 3UTR GCA 72 bp | TCCGTAGCTTGGTCAGTCCATATGTCTTTCCAGCCCTaGGTTTACACCGTCTGCGCATCCATATTGCCCCCA | + |
|
Preference number: 3 (lower is better) Translates to: SVAWSVHMSFQP*VYTVCASILPP Trigger: TGGGGGCAATATGGATGCGCAGACGGTGTAAACGCAGGGCTGGAAAGACATATGGACTGACCAAGCTACGGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000195770.2 |
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| 3UTR CCA 72 bp | GGCTGGAAGGGAAGTCCTGGTTGTCAGTCCGTAGCTTaGTCAGTCCATATGTCTTTCCAGCCCTGCGTTTAC | + |
|
Preference number: 3 (lower is better) Translates to: GWKGSPGCQSVA*SVHMSFQPCVY Trigger: GTAAACGCAGGGCTGGAAAGACATATGGACTGACCAAGCTACGGACTGACAACCAGGACTTCCCTTCCAGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195770.2 |
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| 3UTR TCA 72 bp | GCGCAATGCTCCAGGAGAACGTGGAAGAGACTTCTTTaGCTGTGGTATGGAGTGACTGAGAACTCCGTGGAT | + |
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Preference number: 3 (lower is better) Translates to: AQCSRRTWKRLL*LWYGVTENSVD Trigger: ATCCACGGAGTTCTCAGTCACTCCATACCACAGTCAAAGAAGTCTCTTCCACGTTCTCCTGGAGCATTGCGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195770.2 |
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| 3UTR GCA 72 bp | GGCGTGTGGGGTCTCCTGCACTCAGAAATTCCTTATTaGCTTTATCCAAGAGTATGGCGCCCTTATACCACT | + |
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Preference number: 3 (lower is better) Translates to: GVWGLLHSEIPY*LYPRVWRPYTT Trigger: AGTGGTATAAGGGCGCCATACTCTTGGATAAAGGCAATAAGGAATTTCTGAGTGCAGGAGACCCCACACGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000195770.2 |
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| 3UTR GCA 72 bp | TGGTGTTGGAAGATGTACCAGTTCCCAGAAACACTTTaGACGGGACTATCAGTCTTGACCCCAATGATGCTG | + |
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Preference number: 3 (lower is better) Translates to: WCWKMYQFPETL*TGLSVLTPMML Trigger: CAGCATCATTGGGGTCAAGACTGATAGTCCCGTGCAAAGTGTTTCTGGGAACTGGTACATCTTCCAACACCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000195770.2 |
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| 3UTR-3UTR CAA 90 bp | TGCCAGCGCAATGCTCCAGGAGAACGTGGAAGAGACTTCTTTGACTGTGGTATGCTCAGAAATTCCTTATaGCCTTTATCCAAGAGTATG | + |
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Preference number: 3 (lower is better) Translates to: CQRNAPGERGRDFFDCGMLRNSL*PLSKSM Trigger: CATACTCTTGGATAAAGGCAATAAGGAATTTCTGAG...CATACCACAGTCAAAGAAGTCTCTTCCACGTTCTCCTGGAGCATTGCGCTGGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195770.2 |
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| 3UTR-3UTR CAA 90 bp | ATGCAGATCCTCCCTTGTGACTGGATCAAAAATCAGCGACACTTCCACATAGTTGTTCCCAGAAACACTTaGCACGGGACTATCAGTCTT | + |
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Preference number: 3 (lower is better) Translates to: MQILPCDWIKNQRHFHIVVPRNT*HGTISL Trigger: AAGACTGATAGTCCCGTGCAAAGTGTTTCTGGGAAC...AACTATGTGGAAGTGTCGCTGATTTTTGATCCAGTCACAAGGGAGGATCTGCAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000195770.2 |
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| 3UTR TCA 72 bp | GTGGAAGAGACTTCTTTGACTGTGGTATGGAGTGACTaGGAACTCCGTGGATTCGAGGCAACACATTTAAAA | + |
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Preference number: 3 (lower is better) Translates to: VEETSLTVVWSD*ELRGFEATHLK Trigger: TTTTAAATGTGTTGCCTCGAATCCACGGAGTTCTCAGTCACTCCATACCACAGTCAAAGAAGTCTCTTCCAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195770.2 |
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| 3UTR GCA 72 bp | CTCCGTGGATTCGAGGCAACACATTTAAAATCTGTATaGAGATCCTCCCTTGTGACTGGATCAAAAATCAGC | + |
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Preference number: 3 (lower is better) Translates to: LRGFEATHLKSV*RSSLVTGSKIS Trigger: GCTGATTTTTGATCCAGTCACAAGGGAGGATCTGCATACAGATTTTAAATGTGTTGCCTCGAATCCACGGAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000195770.2 |
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| 3UTR CAA 72 bp | GGGCTGGAAGGGAAGTCCTGGTTGTCAGTCCGTAGCTaGGTCAGTCCATATGTCTTTCCAGCCCTGCGTTTA | + |
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Preference number: 4 (lower is better) Translates to: GLEGKSWLSVRS*VSPYVFPALRL Trigger: TAAACGCAGGGCTGGAAAGACATATGGACTGACCAAGCTACGGACTGACAACCAGGACTTCCCTTCCAGCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195770.2 |
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| 3UTR CAA 72 bp | CAGTTCCCAGAAACACTTTGCACGGGACTATCAGTCTaGACCCCAATGATGCTGGTATTGTCTCCAGGGGAG | + |
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Preference number: 4 (lower is better) Translates to: QFPETLCTGLSV*TPMMLVLSPGE Trigger: CTCCCCTGGAGACAATACCAGCATCATTGGGGTCAAGACTGATAGTCCCGTGCAAAGTGTTTCTGGGAACTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000195770.2 |
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| 3UTR CAA 72 bp | AGGCGTGTGGGGTCTCCTGCACTCAGAAATTCCTTATaGCCTTTATCCAAGAGTATGGCGCCCTTATACCAC | + |
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Preference number: 4 (lower is better) Translates to: RRVGSPALRNSL*PLSKSMAPLYH Trigger: GTGGTATAAGGGCGCCATACTCTTGGATAAAGGCAATAAGGAATTTCTGAGTGCAGGAGACCCCACACGCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000195770.2 |
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| CDS-3UTR CCA 90 bp | ACACTTTGCACGGGACTATCAGTCTTGACCCCAATGATGCTGGTATTGTCTCCAGACATTTGCTCACAGTaGGATGCGTTTCTGTGGGCT | + |
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Preference number: 4 (lower is better) Translates to: TLCTGLSVLTPMMLVLSPDICSQ*DAFLWA Trigger: AGCCCACAGAAACGCATCCCACTGTGAGCAAATGTC...TGGAGACAATACCAGCATCATTGGGGTCAAGACTGATAGTCCCGTGCAAAGTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000195770.2 |
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| CDS-3UTR TCA 90 bp | GCACTCAGAAATTCCTTATTGCCTTTATCCAAGAGTATGGCGCCCTTATACCACGGTGGTGGAGAGAGCTaGGATTTGCAAGTAGGAGAC | + |
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Preference number: 4 (lower is better) Translates to: ALRNSLLPLSKSMAPLYHGGGES*DLQVGD Trigger: GTCTCCTACTTGCAAATCTCAGCTCTCTCCACCACC...GTGGTATAAGGGCGCCATACTCTTGGATAAAGGCAATAAGGAATTTCTGAGTGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195770.2 |
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| CDS-3UTR GCA 90 bp | CAGATCCTCCCTTGTGACTGGATCAAAAATCAGCGACACTTCCACATAGTTTTCGAAACCTTTCCTGTGTaGACCACTGTTGGAGTGGTG | + |
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Preference number: 4 (lower is better) Translates to: QILPCDWIKNQRHFHIVFETFPV*TTVGVV Trigger: CACCACTCCAACAGTGGTGCACACAGGAAAGGTTTC...GAAAACTATGTGGAAGTGTCGCTGATTTTTGATCCAGTCACAAGGGAGGATCTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000195770.2 |
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| CDS-3UTR CCA 90 bp | CAGATCCTCCCTTGTGACTGGATCAAAAATCAGCGACACTTCCACATAGTTTTCCTAGTAACCCGGTGGTaGAGAGAGCTGAGATTTGCA | + |
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Preference number: 4 (lower is better) Translates to: QILPCDWIKNQRHFHIVFLVTRW*RELRFA Trigger: TGCAAATCTCAGCTCTCTCCACCACCGGGTTACTAG...GAAAACTATGTGGAAGTGTCGCTGATTTTTGATCCAGTCACAAGGGAGGATCTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000195770.2 |
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| 3UTR CAA 72 bp | ATGGTGTTGGAAGATGTACCAGTTCCCAGAAACACTTaGCACGGGACTATCAGTCTTGACCCCAATGATGCT | + |
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Preference number: 4 (lower is better) Translates to: MVLEDVPVPRNT*HGTISLDPNDA Trigger: AGCATCATTGGGGTCAAGACTGATAGTCCCGTGCAAAGTGTTTCTGGGAACTGGTACATCTTCCAACACCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000195770.2 |
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| CDS-3UTR GCA 90 bp | GTCAGTCCATATGTCTTTCCAGCCCTGCGTTTACACCGTCTGCGCATCCATATTGACATGAGGCAGAGATaGTTCAGTATTCTTAAAGAC | + |
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Preference number: 4 (lower is better) Translates to: VSPYVFPALRLHRLRIHIDMRQR*FSILKD Trigger: GTCTTTAAGAATACTGAAGCATCTCTGCCTCATGTC...AATATGGATGCGCAGACGGTGTAAACGCAGGGCTGGAAAGACATATGGACTGAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195770.2 |
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| CDS-3UTR CCA 90 bp | TCTCCTGCACTCAGAAATTCCTTATTGCCTTTATCCAAGAGTATGGCGCCCTTATGTGTGCACCACTGTTaGAGTGGTGAAAGCAGAAAC | + |
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Preference number: 4 (lower is better) Translates to: SPALRNSLLPLSKSMAPLCVHHC*SGESRN Trigger: GTTTCTGCTTTCACCACTCCAACAGTGGTGCACACA...TAAGGGCGCCATACTCTTGGATAAAGGCAATAAGGAATTTCTGAGTGCAGGAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195770.2 |
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| 3UTR CAA 72 bp | GAAATGATCACAGGGATGGGTTCCGTGGTTGTTCCTTaGACCCGGAGTTCAATATTCCTAGTGATGTTGTAT | + |
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Preference number: 4 (lower is better) Translates to: EMITGMGSVVVP*TRSSIFLVMLY Trigger: ATACAACATCACTAGGAATATTGAACTCCGGGTCAAAGGAACAACCACGGAACCCATCCCTGTGATCATTTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195770.2 |
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| CDS-3UTR GCA 90 bp | TCCTTATTGCCTTTATCCAAGAGTATGGCGCCCTTATACCACTGTATCTTTCCAAGTTCCACAGACATTTaGTCACAGTGGGATGCGTTT | + |
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Preference number: 4 (lower is better) Translates to: SLLPLSKSMAPLYHCIFPSSTDI*SQWDAF Trigger: AAACGCATCCCACTGTGAGCAAATGTCTGTGGAACT...TGGAAAGATACAGTGGTATAAGGGCGCCATACTCTTGGATAAAGGCAATAAGGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195770.2 |
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| CDS GCA 90 bp | CCAGGTCAGAAAACTATGGGAACTGCTGGAGATGTCGGAGTGAGGTaGCAAGGGGCACCTCAGAACCACAGGTTCACCTTCCAGCCTCAA | + |
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Preference number: 5 (lower is better) Translates to: PGQKTMGTAGDVGVR*QGAPQNHRFTFQPQ Trigger: TTGAGGCTGGAAGGTGAACCTGTGGTTCTGAGGTGCCCCTTGGCACCTCACTCCGACATCTCCAGCAGTTCCCATAGTTTTCTGACCTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027243.13 ENSMUST00000191671.6 |
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| CDS TCA 90 bp | TTACTCCAGGTCAGAAAACTATGGGAACTGCTGGAGATGTCGGAGTaGGGTGCCAAGGGGCACCTCAGAACCACAGGTTCACCTTCCAGC | + |
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Preference number: 5 (lower is better) Translates to: LLQVRKLWELLEMSE*GAKGHLRTTGSPSS Trigger: GCTGGAAGGTGAACCTGTGGTTCTGAGGTGCCCCTTGGCACCTCACTCCGACATCTCCAGCAGTTCCCATAGTTTTCTGACCTGGAGTAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027243.13 ENSMUST00000191671.6 |
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| CDS GCA 90 bp | GCTGAGAAGAGTCCAATTTACTCCAGGTCAGAAAACTATGGGAACTaGTGGAGATGTCGGAGTGAGGTGCCAAGGGGCACCTCAGAACCA | + |
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Preference number: 5 (lower is better) Translates to: AEKSPIYSRSENYGN*WRCRSEVPRGTSEP Trigger: TGGTTCTGAGGTGCCCCTTGGCACCTCACTCCGACATCTCCAGCAGTTCCCATAGTTTTCTGACCTGGAGTAAATTGGACTCTTCTCAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027243.13 ENSMUST00000191671.6 |
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| CDS CCA 90 bp | GAGAAGAGTCCAATTTACTCCAGGTCAGAAAACTATGGGAACTGCTaGAGATGTCGGAGTGAGGTGCCAAGGGGCACCTCAGAACCACAG | + |
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Preference number: 5 (lower is better) Translates to: EKSPIYSRSENYGNC*RCRSEVPRGTSEPQ Trigger: CTGTGGTTCTGAGGTGCCCCTTGGCACCTCACTCCGACATCTCCAGCAGTTCCCATAGTTTTCTGACCTGGAGTAAATTGGACTCTTCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027243.13 ENSMUST00000191671.6 |
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| CDS TCA 90 bp | GGCACCTCAGAACCACAGGTTCACCTTCCAGCCTCAATTCAGATTTaGACTCTCTGCCACGAAACTGACAGTTGTCTCCATGGACTGTGG | + |
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Preference number: 5 (lower is better) Translates to: GTSEPQVHLPASIQI*TLCHETDSCLHGLW Trigger: CCACAGTCCATGGAGACAACTGTCAGTTTCGTGGCAGAGAGTTCAAATCTGAATTGAGGCTGGAAGGTGAACCTGTGGTTCTGAGGTGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027243.13 ENSMUST00000191671.6 |
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| CDS TCA 90 bp | TCACCTTCCAGCCTCAATTCAGATTTGAACTCTCTGCCACGAAACTaGCAGTTGTCTCCATGGACTGTGGGCTTCTCCGATGTAATGGGG | + |
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Preference number: 5 (lower is better) Translates to: SPSSLNSDLNSLPRN*QLSPWTVGFSDVMG Trigger: CCCCATTACATCGGAGAAGCCCACAGTCCATGGAGACAACTGTCAGTTTCGTGGCAGAGAGTTCAAATCTGAATTGAGGCTGGAAGGTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027243.13 ENSMUST00000191671.6 |
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| CDS GCA 90 bp | TGCGTTTCTGAATGTGCAAATGTAGGTACCAGAGTCTTGCTGCACTaGTGGCAGAATCCAGAGTATGTTACCCTTCACCCACATCCTTGG | + |
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Preference number: 5 (lower is better) Translates to: CVSECANVGTRVLLH*WQNPEYVTLHPHPW Trigger: CCAAGGATGTGGGTGAAGGGTAACATACTCTGGATTCTGCCAGCAGTGCAGCAAGACTCTGGTACCTACATTTGCACATTCAGAAACGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027243.13 ENSMUST00000191671.6 |
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| CDS CCA 90 bp | GTTTCTGAATGTGCAAATGTAGGTACCAGAGTCTTGCTGCACTGCTaGCAGAATCCAGAGTATGTTACCCTTCACCCACATCCTTGGCTC | + |
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Preference number: 5 (lower is better) Translates to: VSECANVGTRVLLHC*QNPEYVTLHPHPWL Trigger: GAGCCAAGGATGTGGGTGAAGGGTAACATACTCTGGATTCTGCCAGCAGTGCAGCAAGACTCTGGTACCTACATTTGCACATTCAGAAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027243.13 ENSMUST00000191671.6 |
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| CDS TCA 90 bp | ATGTTACCCTTCACCCACATCCTTGGCTCATCTCTTGGGATCAGCTaGGAAGAGTCCAATTTACTCCAGGTCAGAAAACTATGGGAACTG | + |
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Preference number: 5 (lower is better) Translates to: MLPFTHILGSSLGIS*EESNLLQVRKLWEL Trigger: CAGTTCCCATAGTTTTCTGACCTGGAGTAAATTGGACTCTTCTCAGCTGATCCCAAGAGATGAGCCAAGGATGTGGGTGAAGGGTAACAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027243.13 ENSMUST00000191671.6 |
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| CDS GCA 90 bp | ATTCTTAAAGACCTTGAGTTCCACAGACATTTGCTCACAGTGGGATaGGTTTCTGTGGGCTTCTCCGATGTAATGGGGGATTCAGAAACC | + |
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Preference number: 5 (lower is better) Translates to: ILKDLEFHRHLLTVG*VSVGFSDVMGDSET Trigger: GGTTTCTGAATCCCCCATTACATCGGAGAAGCCCACAGAAACGCATCCCACTGTGAGCAAATGTCTGTGGAACTCAAGGTCTTTAAGAAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000195770.2 |
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| CDS CCA 90 bp | AATCCAGAGTATGTTACCCTTCACCCACATCCTTGGCTCATCTCTTaGGATCAGCTGAGAAGAGTCCAATTTACTCCAGGTCAGAAAACT | + |
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Preference number: 5 (lower is better) Translates to: NPEYVTLHPHPWLIS*DQLRRVQFTPGQKT Trigger: AGTTTTCTGACCTGGAGTAAATTGGACTCTTCTCAGCTGATCCCAAGAGATGAGCCAAGGATGTGGGTGAAGGGTAACATACTCTGGATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027243.13 ENSMUST00000191671.6 |
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| CDS GCA 90 bp | ATTCTTAAAGACCTTGAGTTCCACAGACATTTGCTCACAGTGGGATaGGTTTCTGAATGTGCAAATGTAGGTACCAGAGTCTTGCTGCAC | + |
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Preference number: 5 (lower is better) Translates to: ILKDLEFHRHLLTVG*VSECANVGTRVLLH Trigger: GTGCAGCAAGACTCTGGTACCTACATTTGCACATTCAGAAACGCATCCCACTGTGAGCAAATGTCTGTGGAACTCAAGGTCTTTAAGAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027243.13 ENSMUST00000191671.6 |
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| CDS-3UTR CAA 90 bp | GATGTACCAGTTCCCAGAAACACTTTGCACGGGACTATCAGTCTTGACCCCAATGTATTCTTAAAGACCTaGAGTTCCACAGACATTTGC | + |
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Preference number: 5 (lower is better) Translates to: DVPVPRNTLHGTISLDPNVFLKT*SSTDIC Trigger: GCAAATGTCTGTGGAACTCAAGGTCTTTAAGAATAC...ATTGGGGTCAAGACTGATAGTCCCGTGCAAAGTGTTTCTGGGAACTGGTACATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000195770.2 |
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| CDS GCA 72 bp | AAAACTATGGGAACTGCTGGAGATGTCGGAGTGAGGTaGCAAGGGGCACCTCAGAACCACAGGTTCACCTTC | + |
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Preference number: 6 (lower is better) Translates to: KTMGTAGDVGVR*QGAPQNHRFTF Trigger: GAAGGTGAACCTGTGGTTCTGAGGTGCCCCTTGGCACCTCACTCCGACATCTCCAGCAGTTCCCATAGTTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027243.13 ENSMUST00000191671.6 |
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| CDS GCA 72 bp | AGTCCAATTTACTCCAGGTCAGAAAACTATGGGAACTaGTGGAGATGTCGGAGTGAGGTGCCAAGGGGCACC | + |
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Preference number: 6 (lower is better) Translates to: SPIYSRSENYGN*WRCRSEVPRGT Trigger: GGTGCCCCTTGGCACCTCACTCCGACATCTCCAGCAGTTCCCATAGTTTTCTGACCTGGAGTAAATTGGACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027243.13 ENSMUST00000191671.6 |
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| CDS CCA 72 bp | CCAATTTACTCCAGGTCAGAAAACTATGGGAACTGCTaGAGATGTCGGAGTGAGGTGCCAAGGGGCACCTCA | + |
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Preference number: 6 (lower is better) Translates to: PIYSRSENYGNC*RCRSEVPRGTS Trigger: TGAGGTGCCCCTTGGCACCTCACTCCGACATCTCCAGCAGTTCCCATAGTTTTCTGACCTGGAGTAAATTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027243.13 ENSMUST00000191671.6 |
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| CDS GCA 72 bp | GACCTTGAGTTCCACAGACATTTGCTCACAGTGGGATaGGTTTCTGTGGGCTTCTCCGATGTAATGGGGGAT | + |
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Preference number: 6 (lower is better) Translates to: DLEFHRHLLTVG*VSVGFSDVMGD Trigger: ATCCCCCATTACATCGGAGAAGCCCACAGAAACGCATCCCACTGTGAGCAAATGTCTGTGGAACTCAAGGTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000195770.2 |
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| CDS CAA 90 bp | GCACTGCTGGCAGAATCCAGAGTATGTTACCCTTCACCCACATCCTaGGCTCATCTCTTGGGATCAGCTGAGAAGAGTCCAATTTACTCC | + |
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Preference number: 6 (lower is better) Translates to: ALLAESRVCYPSPTS*AHLLGSAEKSPIYS Trigger: GGAGTAAATTGGACTCTTCTCAGCTGATCCCAAGAGATGAGCCAAGGATGTGGGTGAAGGGTAACATACTCTGGATTCTGCCAGCAGTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027243.13 ENSMUST00000191671.6 |
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| CDS CCA 72 bp | ATTCTTTCAGGTCAGGGCACACTAGTAACCCGGTGGTaGAGAGAGCTGAGATTTGCAAGTAGGAGACATGAG | + |
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Preference number: 6 (lower is better) Translates to: ILSGQGTLVTRW*RELRFASRRHE Trigger: CTCATGTCTCCTACTTGCAAATCTCAGCTCTCTCCACCACCGGGTTACTAGTGTGCCCTGACCTGAAAGAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027243.13 ENSMUST00000191671.6 |
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| CDS CAA 72 bp | GCAGAATCCAGAGTATGTTACCCTTCACCCACATCCTaGGCTCATCTCTTGGGATCAGCTGAGAAGAGTCCA | + |
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Preference number: 6 (lower is better) Translates to: AESRVCYPSPTS*AHLLGSAEKSP Trigger: TGGACTCTTCTCAGCTGATCCCAAGAGATGAGCCAAGGATGTGGGTGAAGGGTAACATACTCTGGATTCTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027243.13 ENSMUST00000191671.6 |
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| CDS CAA 90 bp | TCCAAGAGTATGGCGCCCTTATACCACTGTATCTTTCCATCAGCGTaGCTGGAGATGAATTCTTTCAGGTCAGGGCACACTAGTAACCCG | + |
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Preference number: 6 (lower is better) Translates to: SKSMAPLYHCIFPSA*LEMNSFRSGHTSNP Trigger: CGGGTTACTAGTGTGCCCTGACCTGAAAGAATTCATCTCCAGCAACGCTGATGGAAAGATACAGTGGTATAAGGGCGCCATACTCTTGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027243.13 |
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| CDS TCA 72 bp | AGCCTCAATTCAGATTTGAACTCTCTGCCACGAAACTaGCAGTTGTCTCCATGGACTGTGGGCTTCTCCGAT | + |
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Preference number: 6 (lower is better) Translates to: SLNSDLNSLPRN*QLSPWTVGFSD Trigger: ATCGGAGAAGCCCACAGTCCATGGAGACAACTGTCAGTTTCGTGGCAGAGAGTTCAAATCTGAATTGAGGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027243.13 ENSMUST00000191671.6 |
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| CDS GCA 72 bp | TCCGATGTAATGGGGGATTCAGAAACCTTTCCTGTGTaGACCACTGTTGGAGTGGTGAAAGCAGAAACTCCA | + |
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Preference number: 6 (lower is better) Translates to: SDVMGDSETFPV*TTVGVVKAETP Trigger: TGGAGTTTCTGCTTTCACCACTCCAACAGTGGTGCACACAGGAAAGGTTTCTGAATCCCCCATTACATCGGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000027243.13 ENSMUST00000191671.6 ENSMUST00000195770.2 |
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| CDS CCA 72 bp | TGTGCAAATGTAGGTACCAGAGTCTTGCTGCACTGCTaGCAGAATCCAGAGTATGTTACCCTTCACCCACAT | + |
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Preference number: 6 (lower is better) Translates to: CANVGTRVLLHC*QNPEYVTLHPH Trigger: ATGTGGGTGAAGGGTAACATACTCTGGATTCTGCCAGCAGTGCAGCAAGACTCTGGTACCTACATTTGCACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027243.13 ENSMUST00000191671.6 |
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| CDS CAA 72 bp | ATGGCGCCCTTATACCACTGTATCTTTCCATCAGCGTaGCTGGAGATGAATTCTTTCAGGTCAGGGCACACT | + |
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Preference number: 6 (lower is better) Translates to: MAPLYHCIFPSA*LEMNSFRSGHT Trigger: AGTGTGCCCTGACCTGAAAGAATTCATCTCCAGCAACGCTGATGGAAAGATACAGTGGTATAAGGGCGCCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027243.13 |
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| CDS CAA 90 bp | GAATCCAGAGTATGTTACCCTTCACCCACATCCTTGGCTCATCTCTaGGGATCAGCTGAGAAGAGTCCAATTTACTCCAGGTCAGAAAAC | + |
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Preference number: 6 (lower is better) Translates to: ESRVCYPSPTSLAHL*GSAEKSPIYSRSEN Trigger: GTTTTCTGACCTGGAGTAAATTGGACTCTTCTCAGCTGATCCCAAGAGATGAGCCAAGGATGTGGGTGAAGGGTAACATACTCTGGATTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027243.13 ENSMUST00000191671.6 |
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| CDS TCA 72 bp | GAACCACAGGTTCACCTTCCAGCCTCAATTCAGATTTaGACTCTCTGCCACGAAACTGACAGTTGTCTCCAT | + |
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Preference number: 6 (lower is better) Translates to: EPQVHLPASIQI*TLCHETDSCLH Trigger: ATGGAGACAACTGTCAGTTTCGTGGCAGAGAGTTCAAATCTGAATTGAGGCTGGAAGGTGAACCTGTGGTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027243.13 ENSMUST00000191671.6 |
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| CDS TCA 72 bp | GTTCCACAGACATTTGCTCACAGTGGGATGCGTTTCTaGATGTGCAAATGTAGGTACCAGAGTCTTGCTGCA | + |
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Preference number: 6 (lower is better) Translates to: VPQTFAHSGMRF*MCKCRYQSLAA Trigger: TGCAGCAAGACTCTGGTACCTACATTTGCACATTCAGAAACGCATCCCACTGTGAGCAAATGTCTGTGGAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027243.13 ENSMUST00000191671.6 |
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| CDS TCA 72 bp | TATACCACTGTATCTTTCCATCAGCGTTGCTGGAGATaGATTCTTTCAGGTCAGGGCACACTAGTAACCCGG | + |
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Preference number: 6 (lower is better) Translates to: YTTVSFHQRCWR*ILSGQGTLVTR Trigger: CCGGGTTACTAGTGTGCCCTGACCTGAAAGAATTCATCTCCAGCAACGCTGATGGAAAGATACAGTGGTATA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027243.13 ENSMUST00000191671.6 |
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| CDS GCA 72 bp | GACCTTGAGTTCCACAGACATTTGCTCACAGTGGGATaGGTTTCTGAATGTGCAAATGTAGGTACCAGAGTC | + |
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Preference number: 6 (lower is better) Translates to: DLEFHRHLLTVG*VSECANVGTRV Trigger: GACTCTGGTACCTACATTTGCACATTCAGAAACGCATCCCACTGTGAGCAAATGTCTGTGGAACTCAAGGTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027243.13 ENSMUST00000191671.6 |
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| CDS CAA 72 bp | TGCGTTTCTGAATGTGCAAATGTAGGTACCAGAGTCTaGCTGCACTGCTGGCAGAATCCAGAGTATGTTACC | + |
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Preference number: 6 (lower is better) Translates to: CVSECANVGTRV*LHCWQNPEYVT Trigger: GGTAACATACTCTGGATTCTGCCAGCAGTGCAGCAAGACTCTGGTACCTACATTTGCACATTCAGAAACGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027243.13 ENSMUST00000191671.6 |
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| CDS CAA 90 bp | CAGAGATGCTTCAGTATTCTTAAAGACCTTGAGTTCCACAGACATTaGCTCACAGTGGGATGCGTTTCTGTGGGCTTCTCCGATGTAATG | + |
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Preference number: 6 (lower is better) Translates to: QRCFSILKDLEFHRH*LTVGCVSVGFSDVM Trigger: CATTACATCGGAGAAGCCCACAGAAACGCATCCCACTGTGAGCAAATGTCTGTGGAACTCAAGGTCTTTAAGAATACTGAAGCATCTCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195770.2 |
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| CDS TCA 72 bp | CAGAAACCTTTCCTGTGTGCACCACTGTTGGAGTGGTaGAAGCAGAAACTCCAGTTACTAACACAAGCAAGA | + |
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Preference number: 6 (lower is better) Translates to: QKPFLCAPLLEW*KQKLQLLTQAR Trigger: TCTTGCTTGTGTTAGTAACTGGAGTTTCTGCTTTCACCACTCCAACAGTGGTGCACACAGGAAAGGTTTCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027243.13 ENSMUST00000191671.6 ENSMUST00000195770.2 |
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| CDS TCA 72 bp | TTCACCCACATCCTTGGCTCATCTCTTGGGATCAGCTaGGAAGAGTCCAATTTACTCCAGGTCAGAAAACTA | + |
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Preference number: 6 (lower is better) Translates to: FTHILGSSLGIS*EESNLLQVRKL Trigger: TAGTTTTCTGACCTGGAGTAAATTGGACTCTTCTCAGCTGATCCCAAGAGATGAGCCAAGGATGTGGGTGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027243.13 ENSMUST00000191671.6 |
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| CDS CAA 90 bp | CAGAGATGCTTCAGTATTCTTAAAGACCTTGAGTTCCACAGACATTaGCTCACAGTGGGATGCGTTTCTGAATGTGCAAATGTAGGTACC | + |
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Preference number: 6 (lower is better) Translates to: QRCFSILKDLEFHRH*LTVGCVSECANVGT Trigger: GGTACCTACATTTGCACATTCAGAAACGCATCCCACTGTGAGCAAATGTCTGTGGAACTCAAGGTCTTTAAGAATACTGAAGCATCTCTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027243.13 ENSMUST00000191671.6 |
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