Pregenerated sensors for IL1R1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000026072Ensembl transcript IDs: ENSMUST00000027241.11, ENSMUST00000114795.3
Found 186 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TCCCGGAGCAGCATCCCTGAGCAACCATGGCTCTCTGAGCGGTCCTaGCCACCAAGTCCTGTTCTCTTCCCAATCCAGTTCCAGGTGATC | + |
|
Preference number: 1 (lower is better) Translates to: SRSSIPEQPWLSERS*PPSPVLFPIQFQVI Trigger: GATCACCTGGAACTGGATTGGGAAGAGAACAGGACTTGGTGGCCAGGACCGCTCAGAGAGCCATGGTTGCTCAGGGATGCTGCTCCGGGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027241.11 ENSMUST00000114795.3 |
||
| 3UTR CCA 90 bp | CAATCAACCAGCAGGAAGGCGAACAGCGGCACTGGGACCAAAGATTaGGAGGAGCGTAGACTTCAGCTTCTGCGCAGAAGAGCCCCAGGG | + |
|
Preference number: 1 (lower is better) Translates to: QSTSRKANSGTGTKD*EERRLQLLRRRAPG Trigger: CCCTGGGGCTCTTCTGCGCAGAAGCTGAAGTCTACGCTCCTCCCAATCTTTGGTCCCAGTGCCGCTGTTCGCCTTCCTGCTGGTTGATTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027241.11 ENSMUST00000114795.3 |
||
| 3UTR GCA 90 bp | GTAGGAGCTGATGCAGAGGCCATGGAGGGCTGCTGCTTACTGGGTTaGTCCCGCATGGCTTGTTCGGCCTGCTTTCTTGTAGAACTCAGG | + |
|
Preference number: 1 (lower is better) Translates to: VGADAEAMEGCCLLG*SRMACSACFLVELR Trigger: CCTGAGTTCTACAAGAAAGCAGGCCGAACAAGCCATGCGGGAGCAACCCAGTAAGCAGCAGCCCTCCATGGCCTCTGCATCAGCTCCTAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027241.11 |
||
| 3UTR TCA 90 bp | CTCTGTGACTGCCCCTGGGAACCAGCAATGACTCTTCTTTCTTGCTaGGGGGCTTTCCTGACACTGGCTCTGTTCCACCTCAGACTCCGG | + |
|
Preference number: 1 (lower is better) Translates to: LCDCPWEPAMTLLSC*GAFLTLALFHLRLR Trigger: CCGGAGTCTGAGGTGGAACAGAGCCAGTGTCAGGAAAGCCCCTCAGCAAGAAAGAAGAGTCATTGCTGGTTCCCAGGGGCAGTCACAGAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027241.11 ENSMUST00000114795.3 |
||
| 3UTR TCA 90 bp | CTTCTGGGGAGGACCAGGAGAAGTCGCAGGAAGTTCCCACTGCCTTaGTGTGGTATTTCATCCTCTGTGACTGCCCCTGGGAACCAGCAA | + |
|
Preference number: 1 (lower is better) Translates to: LLGRTRRSRRKFPLP*CGISSSVTAPGNQQ Trigger: TTGCTGGTTCCCAGGGGCAGTCACAGAGGATGAAATACCACATCAAGGCAGTGGGAACTTCCTGCGACTTCTCCTGGTCCTCCCCAGAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027241.11 ENSMUST00000114795.3 |
||
| 3UTR CCA 90 bp | CCCAATCCAGTTCCAGGTGATCTGGAACAAGGGACTGCACAGGTTTaGTTCGTGACTGTTTTACTGGGAGGCACAGCCCAGCTGCAGCCT | + |
|
Preference number: 1 (lower is better) Translates to: PNPVPGDLEQGTAQV*FVTVLLGGTAQLQP Trigger: AGGCTGCAGCTGGGCTGTGCCTCCCAGTAAAACAGTCACGAACCAAACCTGTGCAGTCCCTTGTTCCAGATCACCTGGAACTGGATTGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027241.11 ENSMUST00000114795.3 |
||
| 3UTR CCA 90 bp | GGGGAGGACCAGGAGAAGTCGCAGGAAGTTCCCACTGCCTTGATGTaGTATTTCATCCTCTGTGACTGCCCCTGGGAACCAGCAATGACT | + |
|
Preference number: 1 (lower is better) Translates to: GEDQEKSQEVPTALM*YFILCDCPWEPAMT Trigger: AGTCATTGCTGGTTCCCAGGGGCAGTCACAGAGGATGAAATACCACATCAAGGCAGTGGGAACTTCCTGCGACTTCTCCTGGTCCTCCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027241.11 ENSMUST00000114795.3 |
||
| 3UTR CCA 90 bp | GCAAAGACAGAGACATTCCAAGAGCAGGTACAGAGGTCTCAGAGGTaGTTCTGCAATCAACCAGCAGGAAGGCGAACAGCGGCACTGGGA | + |
|
Preference number: 1 (lower is better) Translates to: AKTETFQEQVQRSQR*FCNQPAGRRTAALG Trigger: TCCCAGTGCCGCTGTTCGCCTTCCTGCTGGTTGATTGCAGAACCACCTCTGAGACCTCTGTACCTGCTCTTGGAATGTCTCTGTCTTTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027241.11 ENSMUST00000114795.3 |
||
| 3UTR GCA 90 bp | GTGAAAAGAACTGGGTTCCTCCTGTCAAAACATGCCTCACTCAGCTaGTTCTCAAAGAACACCCGGGTCGGGTGTCCTCCCACGAGTACT | + |
|
Preference number: 1 (lower is better) Translates to: VKRTGFLLSKHASLS*FSKNTRVGCPPTST Trigger: AGTACTCGTGGGAGGACACCCGACCCGGGTGTTCTTTGAGAAGCAGCTGAGTGAGGCATGTTTTGACAGGAGGAACCCAGTTCTTTTCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027241.11 ENSMUST00000114795.3 |
||
| 3UTR TCA 90 bp | GGTCCTGGCCACCAAGTCCTGTTCTCTTCCCAATCCAGTTCCAGGTaGTCTGGAACAAGGGACTGCACAGGTTTGGTTCGTGACTGTTTT | + |
|
Preference number: 1 (lower is better) Translates to: GPGHQVLFSSQSSSR*SGTRDCTGLVRDCF Trigger: AAAACAGTCACGAACCAAACCTGTGCAGTCCCTTGTTCCAGATCACCTGGAACTGGATTGGGAAGAGAACAGGACTTGGTGGCCAGGACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027241.11 ENSMUST00000114795.3 |
||
| 3UTR TCA 90 bp | GTCGCAGGAAGTTCCCACTGCCTTGATGTGGTATTTCATCCTCTGTaGCTGCCCCTGGGAACCAGCAATGACTCTTCTTTCTTGCTGAGG | + |
|
Preference number: 1 (lower is better) Translates to: VAGSSHCLDVVFHPL*LPLGTSNDSSFLLR Trigger: CCTCAGCAAGAAAGAAGAGTCATTGCTGGTTCCCAGGGGCAGTCACAGAGGATGAAATACCACATCAAGGCAGTGGGAACTTCCTGCGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027241.11 ENSMUST00000114795.3 |
||
| 3UTR CCA 90 bp | TTGTCAGGTGGCAGAAATGCTAGAGCAAATCATAGGCACGGGAAGTaGGCGGCAGGGCAAAGACAGAGACATTCCAAGAGCAGGTACAGA | + |
|
Preference number: 1 (lower is better) Translates to: LSGGRNARANHRHGK*AAGQRQRHSKSRYR Trigger: TCTGTACCTGCTCTTGGAATGTCTCTGTCTTTGCCCTGCCGCCCACTTCCCGTGCCTATGATTTGCTCTAGCATTTCTGCCACCTGACAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027241.11 ENSMUST00000114795.3 |
||
| 3UTR CCA 90 bp | CGGCCAAGGTATCTGGAAAATATCTGGAAGAAATGCCTTCCACTGTaGGGTATCAGTAAACCTCACCCGCACTTATACTTTGGGGAGCCA | + |
|
Preference number: 1 (lower is better) Translates to: RPRYLENIWKKCLPL*GISKPHPHLYFGEP Trigger: TGGCTCCCCAAAGTATAAGTGCGGGTGAGGTTTACTGATACCCCACAGTGGAAGGCATTTCTTCCAGATATTTTCCAGATACCTTGGCCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027241.11 ENSMUST00000114795.3 |
||
| 3UTR GCA 90 bp | TTAAAGAAATGTTCTACAGGCCTGCCTACAGCCCAGAAATATGGATaGATTTTGTCAATTGAGGCTCCTTCCTTGCCCGTGACTCTAGCA | + |
|
Preference number: 1 (lower is better) Translates to: LKKCSTGLPTAQKYG*ILSIEAPSLPVTLA Trigger: TGCTAGAGTCACGGGCAAGGAAGGAGCCTCAATTGACAAAATGCATCCATATTTCTGGGCTGTAGGCAGGCCTGTAGAACATTTCTTTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027241.11 |
||
| 3UTR TCA 90 bp | TTAAAATCTAGACTTCTGCAGAAAGCTAAAGTGACTGCAGAAGAGTaGACCCTACAGAATCCTTCTTCACTGAAACCGTGGTTTTCAAGG | + |
|
Preference number: 1 (lower is better) Translates to: LKSRLLQKAKVTAEE*TLQNPSSLKPWFSR Trigger: CCTTGAAAACCACGGTTTCAGTGAAGAAGGATTCTGTAGGGTTCACTCTTCTGCAGTCACTTTAGCTTTCTGCAGAAGTCTAGATTTTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027241.11 ENSMUST00000114795.3 |
||
| 3UTR CCA 90 bp | CACAGAACTACCTGTTTGACCATCAACCTCATACCTTGTCTTAGTTaGAGTCATCATTGTTATGATAAACACCATGACCAACTTCGGAAG | + |
|
Preference number: 1 (lower is better) Translates to: HRTTCLTINLIPCLS*SHHCYDKHHDQLRK Trigger: CTTCCGAAGTTGGTCATGGTGTTTATCATAACAATGATGACTCCAACTAAGACAAGGTATGAGGTTGATGGTCAAACAGGTAGTTCTGTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027241.11 |
||
| 3UTR-3UTR TCA 90 bp | CGGGTCAGGAATGACCTCACTCCCACAGACTTCTGGCTGCTGTCGGGGACAGCCAGCTGCAGCCTCTTATaGTGGGAGATATTCCGAAGT | + |
|
Preference number: 2 (lower is better) Translates to: RVRNDLTPTDFWLLSGTASCSLL*WEIFRS Trigger: ACTTCGGAATATCTCCCATCATAAGAGGCTGCAGCT...GGCTGTCCCCGACAGCAGCCAGAAGTCTGTGGGAGTGAGGTCATTCCTGACCCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027241.11 ENSMUST00000114795.3 |
||
| 3UTR CAA 90 bp | ACTTCTGGGGAGGACCAGGAGAAGTCGCAGGAAGTTCCCACTGCCTaGATGTGGTATTTCATCCTCTGTGACTGCCCCTGGGAACCAGCA | + |
|
Preference number: 2 (lower is better) Translates to: TSGEDQEKSQEVPTA*MWYFILCDCPWEPA Trigger: TGCTGGTTCCCAGGGGCAGTCACAGAGGATGAAATACCACATCAAGGCAGTGGGAACTTCCTGCGACTTCTCCTGGTCCTCCCCAGAAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027241.11 ENSMUST00000114795.3 |
||
| 3UTR-3UTR TCA 90 bp | GATACTTCTGGGGAGGACCAGGAGAAGTCGCAGGAAGTTCCCACTGCCTTGATGATCACGGGTCAGGAATaGCCTCACTCCCACAGACTT | + |
|
Preference number: 2 (lower is better) Translates to: DTSGEDQEKSQEVPTALMITGQE*PHSHRL Trigger: AAGTCTGTGGGAGTGAGGTCATTCCTGACCCGTGAT...CATCAAGGCAGTGGGAACTTCCTGCGACTTCTCCTGGTCCTCCCCAGAAGTATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027241.11 ENSMUST00000114795.3 |
||
| 3UTR-3UTR GCA 90 bp | AACCTTTTACAGAGAAGCAGCAGGGTTGGGATGACAGGCAAGAGGGCTGGCCAAGTAGACTTCAGCTTCTaGGCAGAAGAGCCCCAGGGT | + |
|
Preference number: 2 (lower is better) Translates to: NLLQRSSRVGMTGKRAGQVDFSF*AEEPQG Trigger: ACCCTGGGGCTCTTCTGCGCAGAAGCTGAAGTCTAC...TTGGCCAGCCCTCTTGCCTGTCATCCCAACCCTGCTGCTTCTCTGTAAAAGGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027241.11 ENSMUST00000114795.3 |
||
| 3UTR-3UTR GCA 90 bp | GATACTTCTGGGGAGGACCAGGAGAAGTCGCAGGAAGTTCCCACTGCCTTGATGGGGGGTAGGAAGCATTaGATTTGTCTCCAGAGAAGC | + |
|
Preference number: 2 (lower is better) Translates to: DTSGEDQEKSQEVPTALMGGRKH*ICLQRS Trigger: GCTTCTCTGGAGACAAATGCAATGCTTCCTACCCCC...CATCAAGGCAGTGGGAACTTCCTGCGACTTCTCCTGGTCCTCCCCAGAAGTATC 53% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000027241.11 ENSMUST00000114795.3 |
||
| 3UTR-3UTR CCA 90 bp | GATACTTCTGGGGAGGACCAGGAGAAGTCGCAGGAAGTTCCCACTGCCTTGATGCCCGCACTTATACTTTaGGGAGCCACTTCTTGGACA | + |
|
Preference number: 2 (lower is better) Translates to: DTSGEDQEKSQEVPTALMPALIL*GATSWT Trigger: TGTCCAAGAAGTGGCTCCCCAAAGTATAAGTGCGGG...CATCAAGGCAGTGGGAACTTCCTGCGACTTCTCCTGGTCCTCCCCAGAAGTATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027241.11 ENSMUST00000114795.3 |
||
| 3UTR-3UTR CCA 90 bp | GAACTGGGTTCCTCCTGTCAAAACATGCCTCACTCAGCTGCTTCTCAAAGAACATCCAGCGGTGGGGGCTaGGGTAAGAGCGAAGTCTCA | + |
|
Preference number: 2 (lower is better) Translates to: ELGSSCQNMPHSAASQRTSSGGG*GKSEVS Trigger: TGAGACTTCGCTCTTACCCCAGCCCCCACCGCTGGA...TGTTCTTTGAGAAGCAGCTGAGTGAGGCATGTTTTGACAGGAGGAACCCAGTTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027241.11 ENSMUST00000114795.3 |
||
| 3UTR-3UTR CCA 90 bp | GAACTGGGTTCCTCCTGTCAAAACATGCCTCACTCAGCTGCTTCTCAAAGAACACATAGGCACGGGAAGTaGGCGGCAGGGCAAAGACAG | + |
|
Preference number: 2 (lower is better) Translates to: ELGSSCQNMPHSAASQRTHRHGK*AAGQRQ Trigger: CTGTCTTTGCCCTGCCGCCCACTTCCCGTGCCTATG...TGTTCTTTGAGAAGCAGCTGAGTGAGGCATGTTTTGACAGGAGGAACCCAGTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027241.11 ENSMUST00000114795.3 |
||
| 3UTR-3UTR TCA 90 bp | CTAGTAAAGAAACAACCTTTTACAGAGAAGCAGCAGGGTTGGGATGACAGGCAAGCAACCATGGCTCTCTaGGCGGTCCTGGCCACCAAG | + |
|
Preference number: 2 (lower is better) Translates to: LVKKQPFTEKQQGWDDRQATMAL*AVLATK Trigger: CTTGGTGGCCAGGACCGCTCAGAGAGCCATGGTTGC...TTGCCTGTCATCCCAACCCTGCTGCTTCTCTGTAAAAGGTTGTTTCTTTACTAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027241.11 ENSMUST00000114795.3 |
||
| 3UTR-3UTR CCA 90 bp | CGGGTCAGGAATGACCTCACTCCCACAGACTTCTGGCTGCTGTCGGGGACAGCCTATCTGGAAAATATCTaGAAGAAATGCCTTCCACTG | + |
|
Preference number: 2 (lower is better) Translates to: RVRNDLTPTDFWLLSGTAYLENI*KKCLPL Trigger: CAGTGGAAGGCATTTCTTCCAGATATTTTCCAGATA...GGCTGTCCCCGACAGCAGCCAGAAGTCTGTGGGAGTGAGGTCATTCCTGACCCG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027241.11 ENSMUST00000114795.3 |
||
| 3UTR-3UTR CCA 90 bp | TCTGACATAAAACTAACCAGCACAGATCTCAGCTCCCCTACTCCAAGAACACCCGAGAAGCAGCAGGGTTaGGATGACAGGCAAGAGGGC | + |
|
Preference number: 2 (lower is better) Translates to: SDIKLTSTDLSSPTPRTPEKQQG*DDRQEG Trigger: GCCCTCTTGCCTGTCATCCCAACCCTGCTGCTTCTC...GGGTGTTCTTGGAGTAGGGGAGCTGAGATCTGTGCTGGTTAGTTTTATGTCAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027241.11 |
||
| 3UTR-3UTR TCA 90 bp | GAACTGGGTTCCTCCTGTCAAAACATGCCTCACTCAGCTGCTTCTCAAAGAACACAATCCAGTTCCAGGTaGTCTGGAACAAGGGACTGC | + |
|
Preference number: 2 (lower is better) Translates to: ELGSSCQNMPHSAASQRTQSSSR*SGTRDC Trigger: GCAGTCCCTTGTTCCAGATCACCTGGAACTGGATTG...TGTTCTTTGAGAAGCAGCTGAGTGAGGCATGTTTTGACAGGAGGAACCCAGTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027241.11 ENSMUST00000114795.3 |
||
| 3UTR-3UTR GCA 90 bp | AAAAGAACTGGGTTCCTCCTGTCAAAACATGCCTCACTCAGCTGCTTCTCAAAGGTAGACTTCAGCTTCTaGGCAGAAGAGCCCCAGGGT | + |
|
Preference number: 2 (lower is better) Translates to: KRTGFLLSKHASLSCFSKVDFSF*AEEPQG Trigger: ACCCTGGGGCTCTTCTGCGCAGAAGCTGAAGTCTAC...CTTTGAGAAGCAGCTGAGTGAGGCATGTTTTGACAGGAGGAACCCAGTTCTTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000027241.11 ENSMUST00000114795.3 |
||
| 3UTR-3UTR CCA 90 bp | GATACTTCTGGGGAGGACCAGGAGAAGTCGCAGGAAGTTCCCACTGCCTTGATGGGCGGCCAAGGTATCTaGAAAATATCTGGAAGAAAT | + |
|
Preference number: 2 (lower is better) Translates to: DTSGEDQEKSQEVPTALMGGQGI*KISGRN Trigger: ATTTCTTCCAGATATTTTCCAGATACCTTGGCCGCC...CATCAAGGCAGTGGGAACTTCCTGCGACTTCTCCTGGTCCTCCCCAGAAGTATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027241.11 ENSMUST00000114795.3 |
||
| 3UTR-3UTR CCA 90 bp | TCTGACATAAAACTAACCAGCACAGATCTCAGCTCCCCTACTCCAAGAACACCCCTCTGTGACTGCCCCTaGGAACCAGCAATGACTCTT | + |
|
Preference number: 2 (lower is better) Translates to: SDIKLTSTDLSSPTPRTPLCDCP*EPAMTL Trigger: AAGAGTCATTGCTGGTTCCCAGGGGCAGTCACAGAG...GGGTGTTCTTGGAGTAGGGGAGCTGAGATCTGTGCTGGTTAGTTTTATGTCAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000027241.11 |
||
| 3UTR-3UTR TCA 90 bp | AAAAGAACTGGGTTCCTCCTGTCAAAACATGCCTCACTCAGCTGCTTCTCAAAGCAATCCAGTTCCAGGTaGTCTGGAACAAGGGACTGC | + |
|
Preference number: 2 (lower is better) Translates to: KRTGFLLSKHASLSCFSKQSSSR*SGTRDC Trigger: GCAGTCCCTTGTTCCAGATCACCTGGAACTGGATTG...CTTTGAGAAGCAGCTGAGTGAGGCATGTTTTGACAGGAGGAACCCAGTTCTTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027241.11 ENSMUST00000114795.3 |
||
| 3UTR-3UTR TCA 90 bp | AACCTTTTACAGAGAAGCAGCAGGGTTGGGATGACAGGCAAGAGGGCTGGCCAAATAAAACACAGTGTTTaGAAACGAAGTTTGGCGGCC | + |
|
Preference number: 2 (lower is better) Translates to: NLLQRSSRVGMTGKRAGQIKHSV*KRSLAA Trigger: GGCCGCCAAACTTCGTTTTCAAACACTGTGTTTTAT...TTGGCCAGCCCTCTTGCCTGTCATCCCAACCCTGCTGCTTCTCTGTAAAAGGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027241.11 ENSMUST00000114795.3 |
||
| 3UTR-3UTR GCA 90 bp | GAACTGGGTTCCTCCTGTCAAAACATGCCTCACTCAGCTGCTTCTCAAAGAACAGGGGGTAGGAAGCATTaGATTTGTCTCCAGAGAAGC | + |
|
Preference number: 2 (lower is better) Translates to: ELGSSCQNMPHSAASQRTGGRKH*ICLQRS Trigger: GCTTCTCTGGAGACAAATGCAATGCTTCCTACCCCC...TGTTCTTTGAGAAGCAGCTGAGTGAGGCATGTTTTGACAGGAGGAACCCAGTTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027241.11 ENSMUST00000114795.3 |
||
| 3UTR-3UTR CCA 90 bp | TCTGACATAAAACTAACCAGCACAGATCTCAGCTCCCCTACTCCAAGAACACCCCCCGCACTTATACTTTaGGGAGCCACTTCTTGGACA | + |
|
Preference number: 2 (lower is better) Translates to: SDIKLTSTDLSSPTPRTPPALIL*GATSWT Trigger: TGTCCAAGAAGTGGCTCCCCAAAGTATAAGTGCGGG...GGGTGTTCTTGGAGTAGGGGAGCTGAGATCTGTGCTGGTTAGTTTTATGTCAGA 49% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000027241.11 |
||
| 3UTR-3UTR TCA 90 bp | TCTGACATAAAACTAACCAGCACAGATCTCAGCTCCCCTACTCCAAGAACACCCAGCTGCAGCCTCTTATaGTGGGAGATATTCCGAAGT | + |
|
Preference number: 2 (lower is better) Translates to: SDIKLTSTDLSSPTPRTPSCSLL*WEIFRS Trigger: ACTTCGGAATATCTCCCATCATAAGAGGCTGCAGCT...GGGTGTTCTTGGAGTAGGGGAGCTGAGATCTGTGCTGGTTAGTTTTATGTCAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027241.11 |
||
| 3UTR-3UTR TCA 90 bp | TCTGACATAAAACTAACCAGCACAGATCTCAGCTCCCCTACTCCAAGAACACCCGTAAGTACTGAGTACTaGGGTAAGTGCACAGGGCTA | + |
|
Preference number: 2 (lower is better) Translates to: SDIKLTSTDLSSPTPRTPVSTEY*GKCTGL Trigger: TAGCCCTGTGCACTTACCTCAGTACTCAGTACTTAC...GGGTGTTCTTGGAGTAGGGGAGCTGAGATCTGTGCTGGTTAGTTTTATGTCAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027241.11 |
||
| 3UTR-3UTR GCA 90 bp | ATGTGTCAATCTGACATAAAACTAACCAGCACAGATCTCAGCTCCCCTACTCCAGCGGTTCTCTGTCACTaGTCTCCCCTTTATCCTCTC | + |
|
Preference number: 2 (lower is better) Translates to: MCQSDIKLTSTDLSSPTPAVLCH*SPLYPL Trigger: GAGAGGATAAAGGGGAGAGCAGTGACAGAGAACCGC...TGGAGTAGGGGAGCTGAGATCTGTGCTGGTTAGTTTTATGTCAGATTGACACAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000027241.11 |
||
| 3UTR-3UTR CCA 90 bp | AAAAGAACTGGGTTCCTCCTGTCAAAACATGCCTCACTCAGCTGCTTCTCAAAGAACACAGAAGGAAGATaGCACGACAGCCATTGCAGG | + |
|
Preference number: 2 (lower is better) Translates to: KRTGFLLSKHASLSCFSKNTEGR*HDSHCR Trigger: CCTGCAATGGCTGTCGTGCCATCTTCCTTCTGTGTT...CTTTGAGAAGCAGCTGAGTGAGGCATGTTTTGACAGGAGGAACCCAGTTCTTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027241.11 ENSMUST00000114795.3 |
||
| 3UTR CAA 90 bp | AAACACAGAAGGAAGATGGCACGACAGCCATTGCAGGGTGGAAGCTaGATTAGAAGAAACCTGTGGGTGTCTGACTTCCTTCTACAGTTA | + |
|
Preference number: 2 (lower is better) Translates to: KHRRKMARQPLQGGS*IRRNLWVSDFLLQL Trigger: TAACTGTAGAAGGAAGTCAGACACCCACAGGTTTCTTCTAATCAAGCTTCCACCCTGCAATGGCTGTCGTGCCATCTTCCTTCTGTGTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027241.11 ENSMUST00000114795.3 |
||
| 3UTR-3UTR TCA 90 bp | ACGGTGAAATCTAAGTATTGGGGGACACATGGTCTTCAGCTGACACCAGATACTCCCCTCCCTGCAGACTaGTTTCTGCTAGTAAAGAAA | + |
|
Preference number: 2 (lower is better) Translates to: TVKSKYWGTHGLQLTPDTPLPAD*FLLVKK Trigger: TTTCTTTACTAGCAGAAATCAGTCTGCAGGGAGGGG...AGTATCTGGTGTCAGCTGAAGACCATGTGTCCCCCAATACTTAGATTTCACCGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027241.11 ENSMUST00000114795.3 |
||
| 3UTR-3UTR TCA 90 bp | AAAAGAACTGGGTTCCTCCTGTCAAAACATGCCTCACTCAGCTGCTTCTCAAAGGTAAGTACTGAGTACTaGGGTAAGTGCACAGGGCTA | + |
|
Preference number: 2 (lower is better) Translates to: KRTGFLLSKHASLSCFSKVSTEY*GKCTGL Trigger: TAGCCCTGTGCACTTACCTCAGTACTCAGTACTTAC...CTTTGAGAAGCAGCTGAGTGAGGCATGTTTTGACAGGAGGAACCCAGTTCTTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027241.11 ENSMUST00000114795.3 |
||
| 3UTR-3UTR TCA 90 bp | CAGTTTAGTGATGTGTTGAGGATCAAGTCCAGGGCCTCAGCTAGGCAACTGGTCTATAAATACCAACAGTaGAAAGAACTGGGTTCCTCC | + |
|
Preference number: 2 (lower is better) Translates to: QFSDVLRIKSRASARQLVYKYQQ*KELGSS Trigger: GGAGGAACCCAGTTCTTTTCACTGTTGGTATTTATA...GACCAGTTGCCTAGCTGAGGCCCTGGACTTGATCCTCAACACATCACTAAACTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027241.11 |
||
| 3UTR-3UTR GCA 90 bp | ATGTGTCAATCTGACATAAAACTAACCAGCACAGATCTCAGCTCCCCTACTCCACCTCCTGTCAAAACATaGCTCACTCAGCTGCTTCTC | + |
|
Preference number: 2 (lower is better) Translates to: MCQSDIKLTSTDLSSPTPPPVKT*LTQLLL Trigger: GAGAAGCAGCTGAGTGAGGCATGTTTTGACAGGAGG...TGGAGTAGGGGAGCTGAGATCTGTGCTGGTTAGTTTTATGTCAGATTGACACAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000027241.11 |
||
| 3UTR-3UTR CCA 90 bp | CGGCCAAGGTATCTGGAAAATATCTGGAAGAAATGCCTTCCACTGTGGGGTATCATATTCCGAAGTTCTTaGCCTGCCCACTTTTGCCAT | + |
|
Preference number: 2 (lower is better) Translates to: RPRYLENIWKKCLPLWGIIFRSS*PAHFCH Trigger: ATGGCAAAAGTGGGCAGGCCAAGAACTTCGGAATAT...GATACCCCACAGTGGAAGGCATTTCTTCCAGATATTTTCCAGATACCTTGGCCG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000027241.11 ENSMUST00000114795.3 |
||
| 3UTR-3UTR CCA 90 bp | CTGAAAAATCTGAAGGTAGGTGCTATAAATACCAACAGTGAAAAGAACTGGGTTGAGAAGCAGCAGGGTTaGGATGACAGGCAAGAGGGC | + |
|
Preference number: 2 (lower is better) Translates to: LKNLKVGAINTNSEKNWVEKQQG*DDRQEG Trigger: GCCCTCTTGCCTGTCATCCCAACCCTGCTGCTTCTC...AACCCAGTTCTTTTCACTGTTGGTATTTATAGCACCTACCTTCAGATTTTTCAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027241.11 ENSMUST00000114795.3 |
||
| 3UTR-3UTR TCA 90 bp | AAAAGAACTGGGTTCCTCCTGTCAAAACATGCCTCACTCAGCTGCTTCTCAAAGAAACCTGTGGGTGTCTaGCTTCCTTCTACAGTTAAT | + |
|
Preference number: 2 (lower is better) Translates to: KRTGFLLSKHASLSCFSKKPVGV*LPSTVN Trigger: ATTAACTGTAGAAGGAAGTCAGACACCCACAGGTTT...CTTTGAGAAGCAGCTGAGTGAGGCATGTTTTGACAGGAGGAACCCAGTTCTTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027241.11 ENSMUST00000114795.3 |
||
| 3UTR-3UTR CCA 90 bp | CTAGTAAAGAAACAACCTTTTACAGAGAAGCAGCAGGGTTGGGATGACAGGCAATTTGAAAACGAAGTTTaGCGGCCAAGGTATCTGGAA | + |
|
Preference number: 2 (lower is better) Translates to: LVKKQPFTEKQQGWDDRQFENEV*RPRYLE Trigger: TTCCAGATACCTTGGCCGCCAAACTTCGTTTTCAAA...TTGCCTGTCATCCCAACCCTGCTGCTTCTCTGTAAAAGGTTGTTTCTTTACTAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027241.11 ENSMUST00000114795.3 |
||
| 3UTR-3UTR CCA 90 bp | CTGAAAAATCTGAAGGTAGGTGCTATAAATACCAACAGTGAAAAGAACTGGGTTAACACAGAAGGAAGATaGCACGACAGCCATTGCAGG | + |
|
Preference number: 2 (lower is better) Translates to: LKNLKVGAINTNSEKNWVNTEGR*HDSHCR Trigger: CCTGCAATGGCTGTCGTGCCATCTTCCTTCTGTGTT...AACCCAGTTCTTTTCACTGTTGGTATTTATAGCACCTACCTTCAGATTTTTCAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027241.11 ENSMUST00000114795.3 |
||
| 3UTR CAA 90 bp | CAGAATATAAGATCTACATTTGTTTATCATCAGTTTAGTGATGTGTaGAGGATCAAGTCCAGGGCCTCAGCTAGGCAACTGGTCTATCAC | + |
|
Preference number: 2 (lower is better) Translates to: QNIRSTFVYHQFSDV*RIKSRASARQLVYH Trigger: GTGATAGACCAGTTGCCTAGCTGAGGCCCTGGACTTGATCCTCAACACATCACTAAACTGATGATAAACAAATGTAGATCTTATATTCTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027241.11 |
||
| 3UTR-3UTR CCA 90 bp | CTGAAAAATCTGAAGGTAGGTGCTATAAATACCAACAGTGAAAAGAACTGGGTTTATCTGGAAAATATCTaGAAGAAATGCCTTCCACTG | + |
|
Preference number: 2 (lower is better) Translates to: LKNLKVGAINTNSEKNWVYLENI*KKCLPL Trigger: CAGTGGAAGGCATTTCTTCCAGATATTTTCCAGATA...AACCCAGTTCTTTTCACTGTTGGTATTTATAGCACCTACCTTCAGATTTTTCAG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000027241.11 ENSMUST00000114795.3 |
||
| 3UTR GCA 72 bp | GGGTCAGGAATGACCTCACTCCCACAGACTTCTGGCTaGTGTCGGGGACAGCCTTTCCTTCTCTACCCCAGC | + |
|
Preference number: 3 (lower is better) Translates to: GSGMTSLPQTSG*CRGQPFLLYPS Trigger: GCTGGGGTAGAGAAGGAAAGGCTGTCCCCGACAGCAGCCAGAAGTCTGTGGGAGTGAGGTCATTCCTGACCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027241.11 ENSMUST00000114795.3 |
||
| 3UTR CCA 72 bp | AGTCAAGCATCCCGGAGCAGCATCCCTGAGCAACCATaGCTCTCTGAGCGGTCCTGGCCACCAAGTCCTGTT | + |
|
Preference number: 3 (lower is better) Translates to: SQASRSSIPEQP*LSERSWPPSPV Trigger: AACAGGACTTGGTGGCCAGGACCGCTCAGAGAGCCATGGTTGCTCAGGGATGCTGCTCCGGGATGCTTGACT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027241.11 ENSMUST00000114795.3 |
||
| 3UTR-3UTR CAA 90 bp | CGGGTCAGGAATGACCTCACTCCCACAGACTTCTGGCTGCTGTCGGGGACAGCCTCATCTCCTGTCAGGTaGGATCCAGGAGAAGTGAGG | + |
|
Preference number: 3 (lower is better) Translates to: RVRNDLTPTDFWLLSGTASSPVR*DPGEVR Trigger: CCTCACTTCTCCTGGATCCAACCTGACAGGAGATGA...GGCTGTCCCCGACAGCAGCCAGAAGTCTGTGGGAGTGAGGTCATTCCTGACCCG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027241.11 ENSMUST00000114795.3 |
||
| 3UTR GCA 72 bp | GGACCAAAGATTGGGAGGAGCGTAGACTTCAGCTTCTaGGCAGAAGAGCCCCAGGGTGGGGGATTGAAACCC | + |
|
Preference number: 3 (lower is better) Translates to: GPKIGRSVDFSF*AEEPQGGGLKP Trigger: GGGTTTCAATCCCCCACCCTGGGGCTCTTCTGCGCAGAAGCTGAAGTCTACGCTCCTCCCAATCTTTGGTCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027241.11 ENSMUST00000114795.3 |
||
| 3UTR GCA 72 bp | GATGCAGAGGCCATGGAGGGCTGCTGCTTACTGGGTTaGTCCCGCATGGCTTGTTCGGCCTGCTTTCTTGTA | + |
|
Preference number: 3 (lower is better) Translates to: DAEAMEGCCLLG*SRMACSACFLV Trigger: TACAAGAAAGCAGGCCGAACAAGCCATGCGGGAGCAACCCAGTAAGCAGCAGCCCTCCATGGCCTCTGCATC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027241.11 |
||
| 3UTR CCA 72 bp | TCACGGGTCAGGAATGACCTCACTCCCACAGACTTCTaGCTGCTGTCGGGGACAGCCTTTCCTTCTCTACCC | + |
|
Preference number: 3 (lower is better) Translates to: SRVRNDLTPTDF*LLSGTAFPSLP Trigger: GGGTAGAGAAGGAAAGGCTGTCCCCGACAGCAGCCAGAAGTCTGTGGGAGTGAGGTCATTCCTGACCCGTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027241.11 ENSMUST00000114795.3 |
||
| 3UTR GCA 72 bp | ACTGGGTTCCTCCTGTCAAAACATGCCTCACTCAGCTaGTTCTCAAAGAACACCCGGGTCGGGTGTCCTCCC | + |
|
Preference number: 3 (lower is better) Translates to: TGFLLSKHASLS*FSKNTRVGCPP Trigger: GGGAGGACACCCGACCCGGGTGTTCTTTGAGAAGCAGCTGAGTGAGGCATGTTTTGACAGGAGGAACCCAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027241.11 ENSMUST00000114795.3 |
||
| 3UTR CCA 72 bp | AGCATCCCTGAGCAACCATGGCTCTCTGAGCGGTCCTaGCCACCAAGTCCTGTTCTCTTCCCAATCCAGTTC | + |
|
Preference number: 3 (lower is better) Translates to: SIPEQPWLSERS*PPSPVLFPIQF Trigger: GAACTGGATTGGGAAGAGAACAGGACTTGGTGGCCAGGACCGCTCAGAGAGCCATGGTTGCTCAGGGATGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027241.11 ENSMUST00000114795.3 |
||
| 3UTR CCA 72 bp | GGGGACACATGGTCTTCAGCTGACACCAGATACTTCTaGGGAGGACCAGGAGAAGTCGCAGGAAGTTCCCAC | + |
|
Preference number: 3 (lower is better) Translates to: GDTWSSADTRYF*GGPGEVAGSSH Trigger: GTGGGAACTTCCTGCGACTTCTCCTGGTCCTCCCCAGAAGTATCTGGTGTCAGCTGAAGACCATGTGTCCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027241.11 ENSMUST00000114795.3 |
||
| 3UTR-3UTR CAA 90 bp | GAGCGTAGACTTCAGCTTCTGCGCAGAAGAGCCCCAGGGTGGGGGATTGAAACCGATATTCCGAAGTTCTaGGCCTGCCCACTTTTGCCA | + |
|
Preference number: 3 (lower is better) Translates to: ERRLQLLRRRAPGWGIETDIPKF*ACPLLP Trigger: TGGCAAAAGTGGGCAGGCCAAGAACTTCGGAATATC...GGTTTCAATCCCCCACCCTGGGGCTCTTCTGCGCAGAAGCTGAAGTCTACGCTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000027241.11 ENSMUST00000114795.3 |
||
| 3UTR TCA 72 bp | GTGATCTGGAACAAGGGACTGCACAGGTTTGGTTCGTaGCTGTTTTACTGGGAGGCACAGCCCAGCTGCAGC | + |
|
Preference number: 3 (lower is better) Translates to: VIWNKGLHRFGS*LFYWEAQPSCS Trigger: GCTGCAGCTGGGCTGTGCCTCCCAGTAAAACAGTCACGAACCAAACCTGTGCAGTCCCTTGTTCCAGATCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027241.11 ENSMUST00000114795.3 |
||
| 3UTR TCA 72 bp | TGCCCCTGGGAACCAGCAATGACTCTTCTTTCTTGCTaGGGGGCTTTCCTGACACTGGCTCTGTTCCACCTC | + |
|
Preference number: 3 (lower is better) Translates to: CPWEPAMTLLSC*GAFLTLALFHL Trigger: GAGGTGGAACAGAGCCAGTGTCAGGAAAGCCCCTCAGCAAGAAAGAAGAGTCATTGCTGGTTCCCAGGGGCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027241.11 ENSMUST00000114795.3 |
||
| 3UTR-3UTR CAA 90 bp | GATACTTCTGGGGAGGACCAGGAGAAGTCGCAGGAAGTTCCCACTGCCTTGATGATGGCACGACAGCCATaGCAGGGTGGAAGCTTGATT | + |
|
Preference number: 3 (lower is better) Translates to: DTSGEDQEKSQEVPTALMMARQP*QGGSLI Trigger: AATCAAGCTTCCACCCTGCAATGGCTGTCGTGCCAT...CATCAAGGCAGTGGGAACTTCCTGCGACTTCTCCTGGTCCTCCCCAGAAGTATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027241.11 ENSMUST00000114795.3 |
||
| 3UTR-3UTR CAA 90 bp | CGGGTCAGGAATGACCTCACTCCCACAGACTTCTGGCTGCTGTCGGGGACAGCCCCCTTAAAACCGGGTTaGTTCTTGTCATGTGAACTT | + |
|
Preference number: 3 (lower is better) Translates to: RVRNDLTPTDFWLLSGTAPLKPG*FLSCEL Trigger: AAGTTCACATGACAAGAACAAACCCGGTTTTAAGGG...GGCTGTCCCCGACAGCAGCCAGAAGTCTGTGGGAGTGAGGTCATTCCTGACCCG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000027241.11 ENSMUST00000114795.3 |
||
| 3UTR TCA 72 bp | TTTTACTGGGAGGCACAGCCCAGCTGCAGCCTCTTATaGTGGGAGATATTCCGAAGTTCTTGGCCTGCCCAC | + |
|
Preference number: 3 (lower is better) Translates to: FYWEAQPSCSLL*WEIFRSSWPAH Trigger: GTGGGCAGGCCAAGAACTTCGGAATATCTCCCATCATAAGAGGCTGCAGCTGGGCTGTGCCTCCCAGTAAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027241.11 ENSMUST00000114795.3 |
||
| 3UTR TCA 72 bp | TCACTGAAGAACTCAGGACAGAAACAAGGTAGGAGCTaGTGCAGAGGCCATGGAGGGCTGCTGCTTACTGGG | + |
|
Preference number: 3 (lower is better) Translates to: SLKNSGQKQGRS*CRGHGGLLLTG Trigger: CCCAGTAAGCAGCAGCCCTCCATGGCCTCTGCATCAGCTCCTACCTTGTTTCTGTCCTGAGTTCTTCAGTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027241.11 |
||
| 3UTR CCA 72 bp | GTTCCAGGTGATCTGGAACAAGGGACTGCACAGGTTTaGTTCGTGACTGTTTTACTGGGAGGCACAGCCCAG | + |
|
Preference number: 3 (lower is better) Translates to: VPGDLEQGTAQV*FVTVLLGGTAQ Trigger: CTGGGCTGTGCCTCCCAGTAAAACAGTCACGAACCAAACCTGTGCAGTCCCTTGTTCCAGATCACCTGGAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027241.11 ENSMUST00000114795.3 |
||
| 3UTR CCA 72 bp | GGCAGAAATGCTAGAGCAAATCATAGGCACGGGAAGTaGGCGGCAGGGCAAAGACAGAGACATTCCAAGAGC | + |
|
Preference number: 3 (lower is better) Translates to: GRNARANHRHGK*AAGQRQRHSKS Trigger: GCTCTTGGAATGTCTCTGTCTTTGCCCTGCCGCCCACTTCCCGTGCCTATGATTTGCTCTAGCATTTCTGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027241.11 ENSMUST00000114795.3 |
||
| 3UTR CCA 72 bp | CAGGAGAAGTCGCAGGAAGTTCCCACTGCCTTGATGTaGTATTTCATCCTCTGTGACTGCCCCTGGGAACCA | + |
|
Preference number: 3 (lower is better) Translates to: QEKSQEVPTALM*YFILCDCPWEP Trigger: TGGTTCCCAGGGGCAGTCACAGAGGATGAAATACCACATCAAGGCAGTGGGAACTTCCTGCGACTTCTCCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027241.11 ENSMUST00000114795.3 |
||
| 3UTR-3UTR CAA 90 bp | AACCTTTTACAGAGAAGCAGCAGGGTTGGGATGACAGGCAAGAGGGCTGGCCAAAGCAAGCTCCTCTCCTaGTCAGGTGGCAGAAATGCT | + |
|
Preference number: 3 (lower is better) Translates to: NLLQRSSRVGMTGKRAGQSKLLS*SGGRNA Trigger: AGCATTTCTGCCACCTGACAAGGAGAGGAGCTTGCT...TTGGCCAGCCCTCTTGCCTGTCATCCCAACCCTGCTGCTTCTCTGTAAAAGGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027241.11 ENSMUST00000114795.3 |
||
| 3UTR-3UTR CAA 90 bp | GATACTTCTGGGGAGGACCAGGAGAAGTCGCAGGAAGTTCCCACTGCCTTGATGCAGAAAAACCAAGCCTaGAAAGCATCACGGGTCAGG | + |
|
Preference number: 3 (lower is better) Translates to: DTSGEDQEKSQEVPTALMQKNQA*KASRVR Trigger: CCTGACCCGTGATGCTTTCAAGGCTTGGTTTTTCTG...CATCAAGGCAGTGGGAACTTCCTGCGACTTCTCCTGGTCCTCCCCAGAAGTATC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027241.11 ENSMUST00000114795.3 |
||
| 3UTR TCA 72 bp | GAAACAACCTTTTACAGAGAAGCAGCAGGGTTGGGATaGCAGGCAAGAGGGCTGGCCAAGTCTGAGAGTAGG | + |
|
Preference number: 3 (lower is better) Translates to: ETTFYREAAGLG*QARGLAKSESR Trigger: CCTACTCTCAGACTTGGCCAGCCCTCTTGCCTGTCATCCCAACCCTGCTGCTTCTCTGTAAAAGGTTGTTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027241.11 ENSMUST00000114795.3 |
||
| 3UTR-3UTR CAA 90 bp | CAGTTTAGTGATGTGTTGAGGATCAAGTCCAGGGCCTCAGCTAGGCAACTGGTCACCCGCACTTATACTTaGGGGAGCCACTTCTTGGAC | + |
|
Preference number: 3 (lower is better) Translates to: QFSDVLRIKSRASARQLVTRTYT*GSHFLD Trigger: GTCCAAGAAGTGGCTCCCCAAAGTATAAGTGCGGGT...GACCAGTTGCCTAGCTGAGGCCCTGGACTTGATCCTCAACACATCACTAAACTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027241.11 |
||
| 3UTR-3UTR CAA 90 bp | GATACTTCTGGGGAGGACCAGGAGAAGTCGCAGGAAGTTCCCACTGCCTTGATGAATGACTCTTCTTTCTaGCTGAGGGGCTTTCCTGAC | + |
|
Preference number: 3 (lower is better) Translates to: DTSGEDQEKSQEVPTALMNDSSF*LRGFPD Trigger: GTCAGGAAAGCCCCTCAGCAAGAAAGAAGAGTCATT...CATCAAGGCAGTGGGAACTTCCTGCGACTTCTCCTGGTCCTCCCCAGAAGTATC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027241.11 ENSMUST00000114795.3 |
||
| 3UTR TCA 72 bp | CACCAAGTCCTGTTCTCTTCCCAATCCAGTTCCAGGTaGTCTGGAACAAGGGACTGCACAGGTTTGGTTCGT | + |
|
Preference number: 3 (lower is better) Translates to: HQVLFSSQSSSR*SGTRDCTGLVR Trigger: ACGAACCAAACCTGTGCAGTCCCTTGTTCCAGATCACCTGGAACTGGATTGGGAAGAGAACAGGACTTGGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027241.11 ENSMUST00000114795.3 |
||
| 3UTR TCA 72 bp | GGAAGATGGCACGACAGCCATTGCAGGGTGGAAGCTTaGTTAGAAGAAACCTGTGGGTGTCTGACTTCCTTC | + |
|
Preference number: 3 (lower is better) Translates to: GRWHDSHCRVEA*LEETCGCLTSF Trigger: GAAGGAAGTCAGACACCCACAGGTTTCTTCTAATCAAGCTTCCACCCTGCAATGGCTGTCGTGCCATCTTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027241.11 ENSMUST00000114795.3 |
||
| 3UTR-3UTR CAA 90 bp | CGGCCAAGGTATCTGGAAAATATCTGGAAGAAATGCCTTCCACTGTGGGGTATCACCCGCACTTATACTTaGGGGAGCCACTTCTTGGAC | + |
|
Preference number: 3 (lower is better) Translates to: RPRYLENIWKKCLPLWGITRTYT*GSHFLD Trigger: GTCCAAGAAGTGGCTCCCCAAAGTATAAGTGCGGGT...GATACCCCACAGTGGAAGGCATTTCTTCCAGATATTTTCCAGATACCTTGGCCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000027241.11 ENSMUST00000114795.3 |
||
| 3UTR GCA 72 bp | TGGCGGCCAAGGTATCTGGAAAATATCTGGAAGAAATaGCTTCCACTGTGGGGTATCAGTAAACCTCACCCG | + |
|
Preference number: 3 (lower is better) Translates to: WRPRYLENIWKK*LPLWGISKPHP Trigger: CGGGTGAGGTTTACTGATACCCCACAGTGGAAGGCATTTCTTCCAGATATTTTCCAGATACCTTGGCCGCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027241.11 ENSMUST00000114795.3 |
||
| 3UTR GCA 72 bp | TGTTCTACAGGCCTGCCTACAGCCCAGAAATATGGATaGATTTTGTCAATTGAGGCTCCTTCCTTGCCCGTG | + |
|
Preference number: 3 (lower is better) Translates to: CSTGLPTAQKYG*ILSIEAPSLPV Trigger: CACGGGCAAGGAAGGAGCCTCAATTGACAAAATGCATCCATATTTCTGGGCTGTAGGCAGGCCTGTAGAACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027241.11 |
||
| 3UTR-3UTR CAA 90 bp | CGGCCAAGGTATCTGGAAAATATCTGGAAGAAATGCCTTCCACTGTGGGGTATCGATATTCCGAAGTTCTaGGCCTGCCCACTTTTGCCA | + |
|
Preference number: 3 (lower is better) Translates to: RPRYLENIWKKCLPLWGIDIPKF*ACPLLP Trigger: TGGCAAAAGTGGGCAGGCCAAGAACTTCGGAATATC...GATACCCCACAGTGGAAGGCATTTCTTCCAGATATTTTCCAGATACCTTGGCCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000027241.11 ENSMUST00000114795.3 |
||
| 3UTR TCA 72 bp | GCCTACAGCCCAGAAATATGGATGCATTTTGTCAATTaGGGCTCCTTCCTTGCCCGTGACTCTAGCATGTGT | + |
|
Preference number: 3 (lower is better) Translates to: AYSPEIWMHFVN*GSFLARDSSMC Trigger: ACACATGCTAGAGTCACGGGCAAGGAAGGAGCCTCAATTGACAAAATGCATCCATATTTCTGGGCTGTAGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027241.11 |
||
| 3UTR GCA 72 bp | AACAGTGAAAAGAACTGGGTTCCTCCTGTCAAAACATaGCTCACTCAGCTGCTTCTCAAAGAACACCCGGGT | + |
|
Preference number: 3 (lower is better) Translates to: NSEKNWVPPVKT*LTQLLLKEHPG Trigger: ACCCGGGTGTTCTTTGAGAAGCAGCTGAGTGAGGCATGTTTTGACAGGAGGAACCCAGTTCTTTTCACTGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027241.11 ENSMUST00000114795.3 |
||
| 3UTR-3UTR CAA 90 bp | GAACTGGGTTCCTCCTGTCAAAACATGCCTCACTCAGCTGCTTCTCAAAGAACATTGCAGGGTGGAAGCTaGATTAGAAGAAACCTGTGG | + |
|
Preference number: 3 (lower is better) Translates to: ELGSSCQNMPHSAASQRTLQGGS*IRRNLW Trigger: CCACAGGTTTCTTCTAATCAAGCTTCCACCCTGCAA...TGTTCTTTGAGAAGCAGCTGAGTGAGGCATGTTTTGACAGGAGGAACCCAGTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027241.11 ENSMUST00000114795.3 |
||
| 3UTR-3UTR CAA 90 bp | AAGATGGCACGACAGCCATTGCAGGGTGGAAGCTTGATTAGAAGAAACCTGTGGAATAAAACACAGTGTTaGAAAACGAAGTTTGGCGGC | + |
|
Preference number: 3 (lower is better) Translates to: KMARQPLQGGSLIRRNLWNKTQC*KTKFGG Trigger: GCCGCCAAACTTCGTTTTCAAACACTGTGTTTTATT...CCACAGGTTTCTTCTAATCAAGCTTCCACCCTGCAATGGCTGTCGTGCCATCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027241.11 ENSMUST00000114795.3 |
||
| 3UTR-3UTR CAA 90 bp | CAGTTTAGTGATGTGTTGAGGATCAAGTCCAGGGCCTCAGCTAGGCAACTGGTCTCTTGTCATGTGAACTaGGTTTTTCAATCTTCCAGA | + |
|
Preference number: 3 (lower is better) Translates to: QFSDVLRIKSRASARQLVSCHVN*VFQSSR Trigger: TCTGGAAGATTGAAAAACCAAGTTCACATGACAAGA...GACCAGTTGCCTAGCTGAGGCCCTGGACTTGATCCTCAACACATCACTAAACTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027241.11 |
||
| 3UTR-3UTR CAA 90 bp | ATGTGTCAATCTGACATAAAACTAACCAGCACAGATCTCAGCTCCCCTACTCCAAATGACTCTTCTTTCTaGCTGAGGGGCTTTCCTGAC | + |
|
Preference number: 3 (lower is better) Translates to: MCQSDIKLTSTDLSSPTPNDSSF*LRGFPD Trigger: GTCAGGAAAGCCCCTCAGCAAGAAAGAAGAGTCATT...TGGAGTAGGGGAGCTGAGATCTGTGCTGGTTAGTTTTATGTCAGATTGACACAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000027241.11 |
||
| 3UTR TCA 72 bp | AGACTTCTGCAGAAAGCTAAAGTGACTGCAGAAGAGTaGACCCTACAGAATCCTTCTTCACTGAAACCGTGG | + |
|
Preference number: 3 (lower is better) Translates to: RLLQKAKVTAEE*TLQNPSSLKPW Trigger: CCACGGTTTCAGTGAAGAAGGATTCTGTAGGGTTCACTCTTCTGCAGTCACTTTAGCTTTCTGCAGAAGTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027241.11 ENSMUST00000114795.3 |
||
| 3UTR CCA 72 bp | CAGTGTTTGAAAACGAAGTTTGGCGGCCAAGGTATCTaGAAAATATCTGGAAGAAATGCCTTCCACTGTGGG | + |
|
Preference number: 3 (lower is better) Translates to: QCLKTKFGGQGI*KISGRNAFHCG Trigger: CCCACAGTGGAAGGCATTTCTTCCAGATATTTTCCAGATACCTTGGCCGCCAAACTTCGTTTTCAAACACTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027241.11 ENSMUST00000114795.3 |
||
| 3UTR CCA 72 bp | TGGCCCTTCCTATCAGGCCTTAGAACGAATGTAAGATaGAAAAAGGACAGAGCAACCAACTTTCAGCGATAC | + |
|
Preference number: 3 (lower is better) Translates to: WPFLSGLRTNVR*KKDRATNFQRY Trigger: GTATCGCTGAAAGTTGGTTGCTCTGTCCTTTTTCCATCTTACATTCGTTCTAAGGCCTGATAGGAAGGGCCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027241.11 |
||
| 3UTR TCA 72 bp | GATCTACATTTGTTTATCATCAGTTTAGTGATGTGTTaGGGATCAAGTCCAGGGCCTCAGCTAGGCAACTGG | + |
|
Preference number: 3 (lower is better) Translates to: DLHLFIISLVMC*GSSPGPQLGNW Trigger: CCAGTTGCCTAGCTGAGGCCCTGGACTTGATCCTCAACACATCACTAAACTGATGATAAACAAATGTAGATC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027241.11 |
||
| 3UTR CCA 72 bp | AAAACACCATCAGAAAGTACGGTGAAATCTAAGTATTaGGGGACACATGGTCTTCAGCTGACACCAGATACT | + |
|
Preference number: 3 (lower is better) Translates to: KTPSESTVKSKY*GTHGLQLTPDT Trigger: AGTATCTGGTGTCAGCTGAAGACCATGTGTCCCCCAATACTTAGATTTCACCGTACTTTCTGATGGTGTTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027241.11 ENSMUST00000114795.3 |
||
| 3UTR TCA 72 bp | CTGCAGAAGAGTGAACCCTACAGAATCCTTCTTCACTaGAACCGTGGTTTTCAAGGTCTACACAATAAAACA | + |
|
Preference number: 3 (lower is better) Translates to: LQKSEPYRILLH*NRGFQGLHNKT Trigger: TGTTTTATTGTGTAGACCTTGAAAACCACGGTTTCAGTGAAGAAGGATTCTGTAGGGTTCACTCTTCTGCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027241.11 ENSMUST00000114795.3 |
||
| 3UTR CCA 72 bp | TATCTGGAAAATATCTGGAAGAAATGCCTTCCACTGTaGGGTATCAGTAAACCTCACCCGCACTTATACTTT | + |
|
Preference number: 3 (lower is better) Translates to: YLENIWKKCLPL*GISKPHPHLYF Trigger: AAAGTATAAGTGCGGGTGAGGTTTACTGATACCCCACAGTGGAAGGCATTTCTTCCAGATATTTTCCAGATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027241.11 ENSMUST00000114795.3 |
||
| 3UTR TCA 72 bp | GAAAAATCTGAAGGTAGGTGCTATAAATACCAACAGTaGAAAGAACTGGGTTCCTCCTGTCAAAACATGCCT | + |
|
Preference number: 3 (lower is better) Translates to: EKSEGRCYKYQQ*KELGSSCQNMP Trigger: AGGCATGTTTTGACAGGAGGAACCCAGTTCTTTTCACTGTTGGTATTTATAGCACCTACCTTCAGATTTTTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027241.11 ENSMUST00000114795.3 |
||
| 3UTR TCA 72 bp | AAAGAAGCTAGTTCAAAATATGCTGGGAACGGCATTTaGCAGAGAGACATTATATGTGACGTGTTAACAGTG | + |
|
Preference number: 3 (lower is better) Translates to: KEASSKYAGNGI*QRDIICDVLTV Trigger: CACTGTTAACACGTCACATATAATGTCTCTCTGTCAAATGCCGTTCCCAGCATATTTTGAACTAGCTTCTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027241.11 |
||
| 3UTR CCA 72 bp | ACCTGTTTGACCATCAACCTCATACCTTGTCTTAGTTaGAGTCATCATTGTTATGATAAACACCATGACCAA | + |
|
Preference number: 3 (lower is better) Translates to: TCLTINLIPCLS*SHHCYDKHHDQ Trigger: TTGGTCATGGTGTTTATCATAACAATGATGACTCCAACTAAGACAAGGTATGAGGTTGATGGTCAAACAGGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027241.11 |
||
| 3UTR CCA 72 bp | ATTTGTTGGTCGAAGAACAAAAGCACACTGGCATATTaGATTCTTTGGGTGAGGAATTTAGGAAAAGTAAGT | + |
|
Preference number: 3 (lower is better) Translates to: ICWSKNKSTLAY*ILWVRNLGKVS Trigger: ACTTACTTTTCCTAAATTCCTCACCCAAAGAATCCAATATGCCAGTGTGCTTTTGTTCTTCGACCAACAAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027241.11 |
||
| CDS-3UTR CCA 90 bp | CGGGTCAGGAATGACCTCACTCCCACAGACTTCTGGCTGCTGTCGGGGACAGCCCCCGGTCCGCTGATATaGGGGTCTTGCTGTCATTCT | + |
|
Preference number: 4 (lower is better) Translates to: RVRNDLTPTDFWLLSGTAPGPLI*GSCCHS Trigger: AGAATGACAGCAAGACCCCCATATCAGCGGACCGGG...GGCTGTCCCCGACAGCAGCCAGAAGTCTGTGGGAGTGAGGTCATTCCTGACCCG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000027241.11 ENSMUST00000114795.3 |
||
| CDS-3UTR CCA 90 bp | CGGGTCAGGAATGACCTCACTCCCACAGACTTCTGGCTGCTGTCGGGGACAGCCTGCTCTTCAGATGACTaGCCCAGCCAGCTGAAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: RVRNDLTPTDFWLLSGTACSSDD*PSQLKP Trigger: AGGCTTCAGCTGGCTGGGCCAGTCATCTGAAGAGCA...GGCTGTCCCCGACAGCAGCCAGAAGTCTGTGGGAGTGAGGTCATTCCTGACCCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027241.11 ENSMUST00000114795.3 |
||
| CDS-3UTR CCA 90 bp | CGGGTCAGGAATGACCTCACTCCCACAGACTTCTGGCTGCTGTCGGGGACAGCCCGTTGGGCTGGCATCTaGTATCTTAAGTTTTTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: RVRNDLTPTDFWLLSGTARWAGI*YLKFFQ Trigger: CTGGAAAAACTTAAGATACCAGATGCCAGCCCAACG...GGCTGTCCCCGACAGCAGCCAGAAGTCTGTGGGAGTGAGGTCATTCCTGACCCG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027241.11 ENSMUST00000114795.3 |
||
| 3UTR CAA 72 bp | GAGGACCAGGAGAAGTCGCAGGAAGTTCCCACTGCCTaGATGTGGTATTTCATCCTCTGTGACTGCCCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: EDQEKSQEVPTA*MWYFILCDCPW Trigger: CCAGGGGCAGTCACAGAGGATGAAATACCACATCAAGGCAGTGGGAACTTCCTGCGACTTCTCCTGGTCCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027241.11 ENSMUST00000114795.3 |
||
| CDS-3UTR GCA 90 bp | CGGGTCAGGAATGACCTCACTCCCACAGACTTCTGGCTGCTGTCGGGGACAGCCTTGTATATGGCTATTTaGTCTTCAGATGACTGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: RVRNDLTPTDFWLLSGTALYMAI*SSDDWP Trigger: GGGCCAGTCATCTGAAGAGCAAATAGCCATATACAA...GGCTGTCCCCGACAGCAGCCAGAAGTCTGTGGGAGTGAGGTCATTCCTGACCCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027241.11 ENSMUST00000114795.3 |
||
| CDS-3UTR CCA 90 bp | AACCTTTTACAGAGAAGCAGCAGGGTTGGGATGACAGGCAAGAGGGCTGGCCAACCCGGTCCGCTGATATaGGGGTCTTGCTGTCATTCT | + |
|
Preference number: 4 (lower is better) Translates to: NLLQRSSRVGMTGKRAGQPGPLI*GSCCHS Trigger: AGAATGACAGCAAGACCCCCATATCAGCGGACCGGG...TTGGCCAGCCCTCTTGCCTGTCATCCCAACCCTGCTGCTTCTCTGTAAAAGGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027241.11 ENSMUST00000114795.3 |
||
| CDS-3UTR CCA 90 bp | AACCTTTTACAGAGAAGCAGCAGGGTTGGGATGACAGGCAAGAGGGCTGGCCAATGCTCTTCAGATGACTaGCCCAGCCAGCTGAAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: NLLQRSSRVGMTGKRAGQCSSDD*PSQLKP Trigger: AGGCTTCAGCTGGCTGGGCCAGTCATCTGAAGAGCA...TTGGCCAGCCCTCTTGCCTGTCATCCCAACCCTGCTGCTTCTCTGTAAAAGGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027241.11 ENSMUST00000114795.3 |
||
| CDS-3UTR CCA 90 bp | GAGCGTAGACTTCAGCTTCTGCGCAGAAGAGCCCCAGGGTGGGGGATTGAAACCGCCGTGCATTTTATTTaGAGTAAGAGGACACTTGCG | + |
|
Preference number: 4 (lower is better) Translates to: ERRLQLLRRRAPGWGIETAVHFI*SKRTLA Trigger: CGCAAGTGTCCTCTTACTCCAAATAAAATGCACGGC...GGTTTCAATCCCCCACCCTGGGGCTCTTCTGCGCAGAAGCTGAAGTCTACGCTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000027241.11 ENSMUST00000114795.3 |
||
| CDS-3UTR CCA 90 bp | GAGCGTAGACTTCAGCTTCTGCGCAGAAGAGCCCCAGGGTGGGGGATTGAAACCGGTCTTTGCAGACTGTaGTCTTTCTTGAAAGTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: ERRLQLLRRRAPGWGIETGLCRL*SFLKVS Trigger: GGAGACTTTCAAGAAAGACCACAGTCTGCAAAGACC...GGTTTCAATCCCCCACCCTGGGGCTCTTCTGCGCAGAAGCTGAAGTCTACGCTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027241.11 ENSMUST00000114795.3 |
||
| CDS-3UTR TCA 90 bp | AAGATGGCACGACAGCCATTGCAGGGTGGAAGCTTGATTAGAAGAAACCTGTGGCCAGTAGACAAGGTCTaGGAACTGGCCCGTGACGTT | + |
|
Preference number: 4 (lower is better) Translates to: KMARQPLQGGSLIRRNLWPVDKV*ELARDV Trigger: AACGTCACGGGCCAGTTCTCAGACCTTGTCTACTGG...CCACAGGTTTCTTCTAATCAAGCTTCCACCCTGCAATGGCTGTCGTGCCATCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027241.11 ENSMUST00000114795.3 |
||
| CDS-3UTR TCA 90 bp | GGGAGGCACAGCCCAGCTGCAGCCTCTTATGATGGGAGATATTCCGAAGTTCTTGTGTTTAGACAATGGTaGTCTCCGTTGGGCTGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: GRHSPAAASYDGRYSEVLVFRQW*SPLGWH Trigger: ATGCCAGCCCAACGGAGATCACCATTGTCTAAACAC...AAGAACTTCGGAATATCTCCCATCATAAGAGGCTGCAGCTGGGCTGTGCCTCCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027241.11 ENSMUST00000114795.3 |
||
| CDS-3UTR CCA 90 bp | GAACTGGGTTCCTCCTGTCAAAACATGCCTCACTCAGCTGCTTCTCAAAGAACAGCCGCTGTGGGAAGGTaGCCTGTGTGCTGTAACACA | + |
|
Preference number: 4 (lower is better) Translates to: ELGSSCQNMPHSAASQRTAAVGR*PVCCNT Trigger: TGTGTTACAGCACACAGGCCACCTTCCCACAGCGGC...TGTTCTTTGAGAAGCAGCTGAGTGAGGCATGTTTTGACAGGAGGAACCCAGTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027241.11 ENSMUST00000114795.3 |
||
| CDS-3UTR CCA 90 bp | TCTGACATAAAACTAACCAGCACAGATCTCAGCTCCCCTACTCCAAGAACACCCAATGTGGAGCCGCTGTaGGAAGGTGGCCTGTGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: SDIKLTSTDLSSPTPRTPNVEPL*EGGLCA Trigger: AGCACACAGGCCACCTTCCCACAGCGGCTCCACATT...GGGTGTTCTTGGAGTAGGGGAGCTGAGATCTGTGCTGGTTAGTTTTATGTCAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027241.11 |
||
| CDS-3UTR TCA 90 bp | GAGCGTAGACTTCAGCTTCTGCGCAGAAGAGCCCCAGGGTGGGGGATTGAAACCGCACTATGTCAACCTTaGAGACTTTATAGATGCACA | + |
|
Preference number: 4 (lower is better) Translates to: ERRLQLLRRRAPGWGIETALCQP*RLYRCT Trigger: TGTGCATCTATAAAGTCTTCAAGGTTGACATAGTGC...GGTTTCAATCCCCCACCCTGGGGCTCTTCTGCGCAGAAGCTGAAGTCTACGCTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027241.11 ENSMUST00000114795.3 |
||
| CDS-3UTR TCA 90 bp | CCATGGCTCTCTGAGCGGTCCTGGCCACCAAGTCCTGTTCTCTTCCCAATCCAGCATCCCTTCCATAAATaGACAGCTTGTATCCAAACT | + |
|
Preference number: 4 (lower is better) Translates to: PWLSERSWPPSPVLFPIQHPFHK*TACIQT Trigger: AGTTTGGATACAAGCTGTTCATTTATGGAAGGGATG...CTGGATTGGGAAGAGAACAGGACTTGGTGGCCAGGACCGCTCAGAGAGCCATGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027241.11 ENSMUST00000114795.3 |
||
| CDS-3UTR CCA 90 bp | GATACTTCTGGGGAGGACCAGGAGAAGTCGCAGGAAGTTCCCACTGCCTTGATGGCCGTGCATTTTATTTaGAGTAAGAGGACACTTGCG | + |
|
Preference number: 4 (lower is better) Translates to: DTSGEDQEKSQEVPTALMAVHFI*SKRTLA Trigger: CGCAAGTGTCCTCTTACTCCAAATAAAATGCACGGC...CATCAAGGCAGTGGGAACTTCCTGCGACTTCTCCTGGTCCTCCCCAGAAGTATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027241.11 ENSMUST00000114795.3 |
||
| CDS-3UTR CCA 90 bp | ACGGTGAAATCTAAGTATTGGGGGACACATGGTCTTCAGCTGACACCAGATACTAATGTGGAGCCGCTGTaGGAAGGTGGCCTGTGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: TVKSKYWGTHGLQLTPDTNVEPL*EGGLCA Trigger: AGCACACAGGCCACCTTCCCACAGCGGCTCCACATT...AGTATCTGGTGTCAGCTGAAGACCATGTGTCCCCCAATACTTAGATTTCACCGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027241.11 ENSMUST00000114795.3 |
||
| CDS-3UTR CCA 90 bp | GATACTTCTGGGGAGGACCAGGAGAAGTCGCAGGAAGTTCCCACTGCCTTGATGCCTCTCCCAGGGTCTTaGGATAAAGAATATAGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: DTSGEDQEKSQEVPTALMPLPGS*DKEYRH Trigger: ATGCCTATATTCTTTATCCCAAGACCCTGGGAGAGG...CATCAAGGCAGTGGGAACTTCCTGCGACTTCTCCTGGTCCTCCCCAGAAGTATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027241.11 ENSMUST00000114795.3 |
||
| CDS-3UTR CCA 90 bp | GATACTTCTGGGGAGGACCAGGAGAAGTCGCAGGAAGTTCCCACTGCCTTGATGAGTTTTTCCAGAACCTaGTCTTTGCAGACTGTGGTC | + |
|
Preference number: 4 (lower is better) Translates to: DTSGEDQEKSQEVPTALMSFSRT*SLQTVV Trigger: GACCACAGTCTGCAAAGACCAGGTTCTGGAAAAACT...CATCAAGGCAGTGGGAACTTCCTGCGACTTCTCCTGGTCCTCCCCAGAAGTATC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027241.11 ENSMUST00000114795.3 |
||
| CDS-3UTR TCA 90 bp | TGCATTTGTCTCCAGAGAAGCAATGAGCCGAGTAAAACACAGAAGGAAGATGGCCCAGTAGACAAGGTCTaGGAACTGGCCCGTGACGTT | + |
|
Preference number: 4 (lower is better) Translates to: CICLQRSNEPSKTQKEDGPVDKV*ELARDV Trigger: AACGTCACGGGCCAGTTCTCAGACCTTGTCTACTGG...GCCATCTTCCTTCTGTGTTTTACTCGGCTCATTGCTTCTCTGGAGACAAATGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027241.11 ENSMUST00000114795.3 |
||
| CDS-3UTR CCA 90 bp | CTAGTAAAGAAACAACCTTTTACAGAGAAGCAGCAGGGTTGGGATGACAGGCAAGCCGCTGTGGGAAGGTaGCCTGTGTGCTGTAACACA | + |
|
Preference number: 4 (lower is better) Translates to: LVKKQPFTEKQQGWDDRQAAVGR*PVCCNT Trigger: TGTGTTACAGCACACAGGCCACCTTCCCACAGCGGC...TTGCCTGTCATCCCAACCCTGCTGCTTCTCTGTAAAAGGTTGTTTCTTTACTAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027241.11 ENSMUST00000114795.3 |
||
| 3UTR CAA 72 bp | AGGAAGATGGCACGACAGCCATTGCAGGGTGGAAGCTaGATTAGAAGAAACCTGTGGGTGTCTGACTTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: RKMARQPLQGGS*IRRNLWVSDFL Trigger: AAGGAAGTCAGACACCCACAGGTTTCTTCTAATCAAGCTTCCACCCTGCAATGGCTGTCGTGCCATCTTCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027241.11 ENSMUST00000114795.3 |
||
| 3UTR CAA 72 bp | ACAGGCCTGCCTACAGCCCAGAAATATGGATGCATTTaGTCAATTGAGGCTCCTTCCTTGCCCGTGACTCTA | + |
|
Preference number: 4 (lower is better) Translates to: TGLPTAQKYGCI*SIEAPSLPVTL Trigger: TAGAGTCACGGGCAAGGAAGGAGCCTCAATTGACAAAATGCATCCATATTTCTGGGCTGTAGGCAGGCCTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027241.11 |
||
| CDS-3UTR TCA 90 bp | AAGATGGCACGACAGCCATTGCAGGGTGGAAGCTTGATTAGAAGAAACCTGTGGGATCAGTTGTATCATTaGTCCTGGGTCAGCTTCGAT | + |
|
Preference number: 4 (lower is better) Translates to: KMARQPLQGGSLIRRNLWDQLYH*SWVSFD Trigger: ATCGAAGCTGACCCAGGATCAATGATACAACTGATC...CCACAGGTTTCTTCTAATCAAGCTTCCACCCTGCAATGGCTGTCGTGCCATCTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027241.11 ENSMUST00000114795.3 |
||
| CDS-3UTR TCA 90 bp | CGGCCAAGGTATCTGGAAAATATCTGGAAGAAATGCCTTCCACTGTGGGGTATCGACTGTGGTCTTTCTTaGAAGTCTCCTGACCAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: RPRYLENIWKKCLPLWGIDCGLS*KSPDQQ Trigger: TTGCTGGTCAGGAGACTTTCAAGAAAGACCACAGTC...GATACCCCACAGTGGAAGGCATTTCTTCCAGATATTTTCCAGATACCTTGGCCG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027241.11 ENSMUST00000114795.3 |
||
| CDS-3UTR TCA 90 bp | AAAAGAACTGGGTTCCTCCTGTCAAAACATGCCTCACTCAGCTGCTTCTCAAAGGTGTTTAGACAATGGTaGTCTCCGTTGGGCTGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: KRTGFLLSKHASLSCFSKVFRQW*SPLGWH Trigger: ATGCCAGCCCAACGGAGATCACCATTGTCTAAACAC...CTTTGAGAAGCAGCTGAGTGAGGCATGTTTTGACAGGAGGAACCCAGTTCTTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027241.11 ENSMUST00000114795.3 |
||
| CDS-3UTR TCA 90 bp | TGCATTTGTCTCCAGAGAAGCAATGAGCCGAGTAAAACACAGAAGGAAGATGGCGATCAGTTGTATCATTaGTCCTGGGTCAGCTTCGAT | + |
|
Preference number: 4 (lower is better) Translates to: CICLQRSNEPSKTQKEDGDQLYH*SWVSFD Trigger: ATCGAAGCTGACCCAGGATCAATGATACAACTGATC...GCCATCTTCCTTCTGTGTTTTACTCGGCTCATTGCTTCTCTGGAGACAAATGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027241.11 ENSMUST00000114795.3 |
||
| CDS-3UTR CCA 90 bp | CTGGAAAATATCTGGAAGAAATGCCTTCCACTGTGGGGTATCAGTAAACCTCACCTGAGTCCTCCACCTTaGCAGGTACAAACCAAAGAT | + |
|
Preference number: 4 (lower is better) Translates to: LENIWKKCLPLWGISKPHLSPPP*QVQTKD Trigger: ATCTTTGGTTTGTACCTGCCAAGGTGGAGGACTCAG...GTGAGGTTTACTGATACCCCACAGTGGAAGGCATTTCTTCCAGATATTTTCCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027241.11 ENSMUST00000114795.3 |
||
| CDS-3UTR CCA 90 bp | GGGAGGCACAGCCCAGCTGCAGCCTCTTATGATGGGAGATATTCCGAAGTTCTTGTGTGTATTTTCTTTTaGTTGAAGGATGTTCCACAA | + |
|
Preference number: 4 (lower is better) Translates to: GRHSPAAASYDGRYSEVLVCIFF*LKDVPQ Trigger: TTGTGGAACATCCTTCAACCAAAAGAAAATACACAC...AAGAACTTCGGAATATCTCCCATCATAAGAGGCTGCAGCTGGGCTGTGCCTCCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027241.11 ENSMUST00000114795.3 |
||
| CDS-3UTR CCA 90 bp | ACGGTGAAATCTAAGTATTGGGGGACACATGGTCTTCAGCTGACACCAGATACTCCTCTCCCAGGGTCTTaGGATAAAGAATATAGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: TVKSKYWGTHGLQLTPDTPLPGS*DKEYRH Trigger: ATGCCTATATTCTTTATCCCAAGACCCTGGGAGAGG...AGTATCTGGTGTCAGCTGAAGACCATGTGTCCCCCAATACTTAGATTTCACCGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027241.11 ENSMUST00000114795.3 |
||
| CDS-3UTR CCA 90 bp | AACCTTTTACAGAGAAGCAGCAGGGTTGGGATGACAGGCAAGAGGGCTGGCCAAGAACTGAATAGAATCTaGCATTTTCTCATAGTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: NLLQRSSRVGMTGKRAGQELNRI*HFLIVL Trigger: CAAGACTATGAGAAAATGCCAGATTCTATTCAGTTC...TTGGCCAGCCCTCTTGCCTGTCATCCCAACCCTGCTGCTTCTCTGTAAAAGGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027241.11 ENSMUST00000114795.3 |
||
| CDS-3UTR CCA 90 bp | TGCATTTGTCTCCAGAGAAGCAATGAGCCGAGTAAAACACAGAAGGAAGATGGCGGTCTTTGCAGACTGTaGTCTTTCTTGAAAGTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: CICLQRSNEPSKTQKEDGGLCRL*SFLKVS Trigger: GGAGACTTTCAAGAAAGACCACAGTCTGCAAAGACC...GCCATCTTCCTTCTGTGTTTTACTCGGCTCATTGCTTCTCTGGAGACAAATGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027241.11 ENSMUST00000114795.3 |
||
| CDS-3UTR CCA 90 bp | TGCATTTGTCTCCAGAGAAGCAATGAGCCGAGTAAAACACAGAAGGAAGATGGCAGTTTTTCCAGAACCTaGTCTTTGCAGACTGTGGTC | + |
|
Preference number: 4 (lower is better) Translates to: CICLQRSNEPSKTQKEDGSFSRT*SLQTVV Trigger: GACCACAGTCTGCAAAGACCAGGTTCTGGAAAAACT...GCCATCTTCCTTCTGTGTTTTACTCGGCTCATTGCTTCTCTGGAGACAAATGCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027241.11 ENSMUST00000114795.3 |
||
| CDS-3UTR CCA 90 bp | ACGGTGAAATCTAAGTATTGGGGGACACATGGTCTTCAGCTGACACCAGATACTCGTTGGGCTGGCATCTaGTATCTTAAGTTTTTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: TVKSKYWGTHGLQLTPDTRWAGI*YLKFFQ Trigger: CTGGAAAAACTTAAGATACCAGATGCCAGCCCAACG...AGTATCTGGTGTCAGCTGAAGACCATGTGTCCCCCAATACTTAGATTTCACCGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000027241.11 ENSMUST00000114795.3 |
||
| CDS-3UTR GCA 90 bp | CTGGAAAATATCTGGAAGAAATGCCTTCCACTGTGGGGTATCAGTAAACCTCACTTGTATATGGCTATTTaGTCTTCAGATGACTGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: LENIWKKCLPLWGISKPHLYMAI*SSDDWP Trigger: GGGCCAGTCATCTGAAGAGCAAATAGCCATATACAA...GTGAGGTTTACTGATACCCCACAGTGGAAGGCATTTCTTCCAGATATTTTCCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027241.11 ENSMUST00000114795.3 |
||
| 3UTR CAA 72 bp | AGATCTACATTTGTTTATCATCAGTTTAGTGATGTGTaGAGGATCAAGTCCAGGGCCTCAGCTAGGCAACTG | + |
|
Preference number: 4 (lower is better) Translates to: RSTFVYHQFSDV*RIKSRASARQL Trigger: CAGTTGCCTAGCTGAGGCCCTGGACTTGATCCTCAACACATCACTAAACTGATGATAAACAAATGTAGATCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027241.11 |
||
| CDS-3UTR TCA 90 bp | CTGAAAAATCTGAAGGTAGGTGCTATAAATACCAACAGTGAAAAGAACTGGGTTGACTGTGGTCTTTCTTaGAAGTCTCCTGACCAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: LKNLKVGAINTNSEKNWVDCGLS*KSPDQQ Trigger: TTGCTGGTCAGGAGACTTTCAAGAAAGACCACAGTC...AACCCAGTTCTTTTCACTGTTGGTATTTATAGCACCTACCTTCAGATTTTTCAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027241.11 ENSMUST00000114795.3 |
||
| CDS-3UTR CCA 90 bp | ATGTGTCAATCTGACATAAAACTAACCAGCACAGATCTCAGCTCCCCTACTCCAGAACTGAATAGAATCTaGCATTTTCTCATAGTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: MCQSDIKLTSTDLSSPTPELNRI*HFLIVL Trigger: CAAGACTATGAGAAAATGCCAGATTCTATTCAGTTC...TGGAGTAGGGGAGCTGAGATCTGTGCTGGTTAGTTTTATGTCAGATTGACACAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000027241.11 |
||
| 3UTR CAA 72 bp | CATTTGTTGGTCGAAGAACAAAAGCACACTGGCATATaGGATTCTTTGGGTGAGGAATTTAGGAAAAGTAAG | + |
|
Preference number: 4 (lower is better) Translates to: HLLVEEQKHTGI*DSLGEEFRKSK Trigger: CTTACTTTTCCTAAATTCCTCACCCAAAGAATCCAATATGCCAGTGTGCTTTTGTTCTTCGACCAACAAATG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027241.11 |
||
| CDS-3UTR TCA 90 bp | CTGAAAAATCTGAAGGTAGGTGCTATAAATACCAACAGTGAAAAGAACTGGGTTCATCCCTTCCATAAATaGACAGCTTGTATCCAAACT | + |
|
Preference number: 4 (lower is better) Translates to: LKNLKVGAINTNSEKNWVHPFHK*TACIQT Trigger: AGTTTGGATACAAGCTGTTCATTTATGGAAGGGATG...AACCCAGTTCTTTTCACTGTTGGTATTTATAGCACCTACCTTCAGATTTTTCAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027241.11 ENSMUST00000114795.3 |
||
| CDS-3UTR CCA 90 bp | CTGAAAAATCTGAAGGTAGGTGCTATAAATACCAACAGTGAAAAGAACTGGGTTGTGTGTATTTTCTTTTaGTTGAAGGATGTTCCACAA | + |
|
Preference number: 4 (lower is better) Translates to: LKNLKVGAINTNSEKNWVVCIFF*LKDVPQ Trigger: TTGTGGAACATCCTTCAACCAAAAGAAAATACACAC...AACCCAGTTCTTTTCACTGTTGGTATTTATAGCACCTACCTTCAGATTTTTCAG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000027241.11 ENSMUST00000114795.3 |
||
| CDS CCA 90 bp | ATAAGGGCACACAAGACTTCCATCCCCGGCAATGTGGAGCCGCTGTaGGAAGGTGGCCTGTGTGCTGTAACACAAGCCAGGGTCATTCTC | + |
|
Preference number: 5 (lower is better) Translates to: IRAHKTSIPGNVEPL*EGGLCAVTQARVIL Trigger: GAGAATGACCCTGGCTTGTGTTACAGCACACAGGCCACCTTCCCACAGCGGCTCCACATTGCCGGGGATGGAAGTCTTGTGTGCCCTTAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027241.11 ENSMUST00000114795.3 |
||
| CDS CCA 90 bp | ACACAAGACTTCCATCCCCGGCAATGTGGAGCCGCTGTGGGAAGGTaGCCTGTGTGCTGTAACACAAGCCAGGGTCATTCTCTAACACAG | + |
|
Preference number: 5 (lower is better) Translates to: TQDFHPRQCGAAVGR*PVCCNTSQGHSLTQ Trigger: CTGTGTTAGAGAATGACCCTGGCTTGTGTTACAGCACACAGGCCACCTTCCCACAGCGGCTCCACATTGCCGGGGATGGAAGTCTTGTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027241.11 ENSMUST00000114795.3 |
||
| CDS-3UTR CAA 90 bp | CCATGGCTCTCTGAGCGGTCCTGGCCACCAAGTCCTGTTCTCTTCCCAATCCAGCCGAAGAAGCTCACGTaGTCAAGAAGCAGAGGTTTA | + |
|
Preference number: 5 (lower is better) Translates to: PWLSERSWPPSPVLFPIQPKKLT*SRSRGL Trigger: TAAACCTCTGCTTCTTGACAACGTGAGCTTCTTCGG...CTGGATTGGGAAGAGAACAGGACTTGGTGGCCAGGACCGCTCAGAGAGCCATGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027241.11 ENSMUST00000114795.3 |
||
| CDS-3UTR CAA 90 bp | GGGAGGCACAGCCCAGCTGCAGCCTCTTATGATGGGAGATATTCCGAAGTTCTTCCTGAGTCCTCCACCTaGGCAGGTACAAACCAAAGA | + |
|
Preference number: 5 (lower is better) Translates to: GRHSPAAASYDGRYSEVLPESST*AGTNQR Trigger: TCTTTGGTTTGTACCTGCCAAGGTGGAGGACTCAGG...AAGAACTTCGGAATATCTCCCATCATAAGAGGCTGCAGCTGGGCTGTGCCTCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027241.11 ENSMUST00000114795.3 |
||
| CDS-3UTR CAA 90 bp | CCATGGCTCTCTGAGCGGTCCTGGCCACCAAGTCCTGTTCTCTTCCCAATCCAGTTCCATCTGAAGCTTTaGAAGGAAGAAAACCAGAGC | + |
|
Preference number: 5 (lower is better) Translates to: PWLSERSWPPSPVLFPIQFHLKL*KEENQS Trigger: GCTCTGGTTTTCTTCCTTCAAAAGCTTCAGATGGAA...CTGGATTGGGAAGAGAACAGGACTTGGTGGCCAGGACCGCTCAGAGAGCCATGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027241.11 ENSMUST00000114795.3 |
||
| CDS-3UTR CAA 90 bp | CCATGGCTCTCTGAGCGGTCCTGGCCACCAAGTCCTGTTCTCTTCCCAATCCAGTCCTGGATGAGAGCATaGTATATGGCTATTTGCTCT | + |
|
Preference number: 5 (lower is better) Translates to: PWLSERSWPPSPVLFPIQSWMRA*YMAICS Trigger: AGAGCAAATAGCCATATACAATGCTCTCATCCAGGA...CTGGATTGGGAAGAGAACAGGACTTGGTGGCCAGGACCGCTCAGAGAGCCATGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027241.11 ENSMUST00000114795.3 |
||
| CDS TCA 90 bp | CTGATCCATTCCACTTCCAGTAGACAAGGTCTGAGAACTGGCCCGTaGCGTTGCAGATCAGTTGTATCATTGATCCTGGGTCAGCTTCGA | + |
|
Preference number: 5 (lower is better) Translates to: LIHSTSSRQGLRTGP*RCRSVVSLILGQLR Trigger: TCGAAGCTGACCCAGGATCAATGATACAACTGATCTGCAACGTCACGGGCCAGTTCTCAGACCTTGTCTACTGGAAGTGGAATGGATCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027241.11 ENSMUST00000114795.3 |
||
| CDS CCA 90 bp | GATGTTCATTCTGCTGATGAATCCTGGAGTCCCGGTCCGCTGATATaGGGGTCTTGCTGTCATTCTTGTACCAAATTATGGTGTCGCCGT | + |
|
Preference number: 5 (lower is better) Translates to: DVHSADESWSPGPLI*GSCCHSCTKLWCRR Trigger: ACGGCGACACCATAATTTGGTACAAGAATGACAGCAAGACCCCCATATCAGCGGACCGGGACTCCAGGATTCATCAGCAGAATGAACATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027241.11 ENSMUST00000114795.3 |
||
| CDS CCA 90 bp | CCTTGGCAGGTACAAACCAAAGATGTTCATTCTGCTGATGAATCCTaGAGTCCCGGTCCGCTGATATGGGGGTCTTGCTGTCATTCTTGT | + |
|
Preference number: 5 (lower is better) Translates to: PWQVQTKDVHSADES*SPGPLIWGSCCHSC Trigger: ACAAGAATGACAGCAAGACCCCCATATCAGCGGACCGGGACTCCAGGATTCATCAGCAGAATGAACATCTTTGGTTTGTACCTGCCAAGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027241.11 ENSMUST00000114795.3 |
||
| CDS-3UTR CAA 90 bp | GAGCGTAGACTTCAGCTTCTGCGCAGAAGAGCCCCAGGGTGGGGGATTGAAACCCATTTTCTCATAGTCTaGGATTTTCTCCAACTCAAG | + |
|
Preference number: 5 (lower is better) Translates to: ERRLQLLRRRAPGWGIETHFLIV*DFLQLK Trigger: CTTGAGTTGGAGAAAATCCAAGACTATGAGAAAATG...GGTTTCAATCCCCCACCCTGGGGCTCTTCTGCGCAGAAGCTGAAGTCTACGCTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000027241.11 ENSMUST00000114795.3 |
||
| CDS GCA 90 bp | TCTGCTGATGAATCCTGGAGTCCCGGTCCGCTGATATGGGGGTCTTaGTGTCATTCTTGTACCAAATTATGGTGTCGCCGTGCATTTTAT | + |
|
Preference number: 5 (lower is better) Translates to: SADESWSPGPLIWGS*CHSCTKLWCRRAFY Trigger: ATAAAATGCACGGCGACACCATAATTTGGTACAAGAATGACAGCAAGACCCCCATATCAGCGGACCGGGACTCCAGGATTCATCAGCAGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027241.11 ENSMUST00000114795.3 |
||
| CDS-3UTR CAA 90 bp | ATGTGTCAATCTGACATAAAACTAACCAGCACAGATCTCAGCTCCCCTACTCCACGAGTGGTAAGTGTGTaGCTGCCGGCAGTTTCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: MCQSDIKLTSTDLSSPTPRVVSV*LPAVSP Trigger: AGGAGAAACTGCCGGCAGCAACACACTTACCACTCG...TGGAGTAGGGGAGCTGAGATCTGTGCTGGTTAGTTTTATGTCAGATTGACACAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027241.11 |
||
| CDS-3UTR CAA 90 bp | CTGGAAAATATCTGGAAGAAATGCCTTCCACTGTGGGGTATCAGTAAACCTCACCGAGTGGTAAGTGTGTaGCTGCCGGCAGTTTCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: LENIWKKCLPLWGISKPHRVVSV*LPAVSP Trigger: AGGAGAAACTGCCGGCAGCAACACACTTACCACTCG...GTGAGGTTTACTGATACCCCACAGTGGAAGGCATTTCTTCCAGATATTTTCCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027241.11 ENSMUST00000114795.3 |
||
| CDS TCA 90 bp | CCAAAGATGTTCATTCTGCTGATGAATCCTGGAGTCCCGGTCCGCTaGTATGGGGGTCTTGCTGTCATTCTTGTACCAAATTATGGTGTC | + |
|
Preference number: 5 (lower is better) Translates to: PKMFILLMNPGVPVR*YGGLAVILVPNYGV Trigger: GACACCATAATTTGGTACAAGAATGACAGCAAGACCCCCATATCAGCGGACCGGGACTCCAGGATTCATCAGCAGAATGAACATCTTTGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027241.11 ENSMUST00000114795.3 |
||
| CDS CCA 90 bp | ATCTCCGTTGGGCTGGCATCTGGTATCTTAAGTTTTTCCAGAACCTaGTCTTTGCAGACTGTGGTCTTTCTTGAAAGTCTCCTGACCAGC | + |
|
Preference number: 5 (lower is better) Translates to: ISVGLASGILSFSRT*SLQTVVFLESLLTS Trigger: GCTGGTCAGGAGACTTTCAAGAAAGACCACAGTCTGCAAAGACCAGGTTCTGGAAAAACTTAAGATACCAGATGCCAGCCCAACGGAGAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027241.11 ENSMUST00000114795.3 |
||
| CDS-3UTR CAA 90 bp | CAGTTTAGTGATGTGTTGAGGATCAAGTCCAGGGCCTCAGCTAGGCAACTGGTCGTCTTGCTGTCATTCTaGTACCAAATTATGGTGTCG | + |
|
Preference number: 5 (lower is better) Translates to: QFSDVLRIKSRASARQLVVLLSF*YQIMVS Trigger: CGACACCATAATTTGGTACAAGAATGACAGCAAGAC...GACCAGTTGCCTAGCTGAGGCCCTGGACTTGATCCTCAACACATCACTAAACTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027241.11 |
||
| CDS-3UTR CAA 90 bp | GAACTGGGTTCCTCCTGTCAAAACATGCCTCACTCAGCTGCTTCTCAAAGAACACCGAAGAAGCTCACGTaGTCAAGAAGCAGAGGTTTA | + |
|
Preference number: 5 (lower is better) Translates to: ELGSSCQNMPHSAASQRTPKKLT*SRSRGL Trigger: TAAACCTCTGCTTCTTGACAACGTGAGCTTCTTCGG...TGTTCTTTGAGAAGCAGCTGAGTGAGGCATGTTTTGACAGGAGGAACCCAGTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027241.11 ENSMUST00000114795.3 |
||
| CDS CCA 90 bp | AGTAAGCGGTGTTTAGACAATGGTGATCTCCGTTGGGCTGGCATCTaGTATCTTAAGTTTTTCCAGAACCTGGTCTTTGCAGACTGTGGT | + |
|
Preference number: 5 (lower is better) Translates to: SKRCLDNGDLRWAGI*YLKFFQNLVFADCG Trigger: ACCACAGTCTGCAAAGACCAGGTTCTGGAAAAACTTAAGATACCAGATGCCAGCCCAACGGAGATCACCATTGTCTAAACACCGCTTACT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027241.11 ENSMUST00000114795.3 |
||
| CDS CCA 90 bp | GGATCCAGGGTTAGTAAGCGGTGTTTAGACAATGGTGATCTCCGTTaGGCTGGCATCTGGTATCTTAAGTTTTTCCAGAACCTGGTCTTT | + |
|
Preference number: 5 (lower is better) Translates to: GSRVSKRCLDNGDLR*AGIWYLKFFQNLVF Trigger: AAAGACCAGGTTCTGGAAAAACTTAAGATACCAGATGCCAGCCCAACGGAGATCACCATTGTCTAAACACCGCTTACTAACCCTGGATCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027241.11 ENSMUST00000114795.3 |
||
| CDS-3UTR CAA 90 bp | AACCTTTTACAGAGAAGCAGCAGGGTTGGGATGACAGGCAAGAGGGCTGGCCAAGGAGTAAGAGGACACTaGCGAATATCAATTTCATTT | + |
|
Preference number: 5 (lower is better) Translates to: NLLQRSSRVGMTGKRAGQGVRGH*RISISF Trigger: AAATGAAATTGATATTCGCAAGTGTCCTCTTACTCC...TTGGCCAGCCCTCTTGCCTGTCATCCCAACCCTGCTGCTTCTCTGTAAAAGGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027241.11 ENSMUST00000114795.3 |
||
| CDS-3UTR CAA 90 bp | GGGAGGCACAGCCCAGCTGCAGCCTCTTATGATGGGAGATATTCCGAAGTTCTTAGTGTGTATTTTCTTTaGGTTGAAGGATGTTCCACA | + |
|
Preference number: 5 (lower is better) Translates to: GRHSPAAASYDGRYSEVLSVYFL*VEGCST Trigger: TGTGGAACATCCTTCAACCAAAAGAAAATACACACT...AAGAACTTCGGAATATCTCCCATCATAAGAGGCTGCAGCTGGGCTGTGCCTCCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027241.11 ENSMUST00000114795.3 |
||
| CDS-3UTR CAA 90 bp | AAGATGGCACGACAGCCATTGCAGGGTGGAAGCTTGATTAGAAGAAACCTGTGGTTCCATCTGAAGCTTTaGAAGGAAGAAAACCAGAGC | + |
|
Preference number: 5 (lower is better) Translates to: KMARQPLQGGSLIRRNLWFHLKL*KEENQS Trigger: GCTCTGGTTTTCTTCCTTCAAAAGCTTCAGATGGAA...CCACAGGTTTCTTCTAATCAAGCTTCCACCCTGCAATGGCTGTCGTGCCATCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027241.11 ENSMUST00000114795.3 |
||
| CDS-3UTR CAA 90 bp | AAGATGGCACGACAGCCATTGCAGGGTGGAAGCTTGATTAGAAGAAACCTGTGGGGAGTAAGAGGACACTaGCGAATATCAATTTCATTT | + |
|
Preference number: 5 (lower is better) Translates to: KMARQPLQGGSLIRRNLWGVRGH*RISISF Trigger: AAATGAAATTGATATTCGCAAGTGTCCTCTTACTCC...CCACAGGTTTCTTCTAATCAAGCTTCCACCCTGCAATGGCTGTCGTGCCATCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027241.11 ENSMUST00000114795.3 |
||
| CDS-3UTR CAA 90 bp | TGCATTTGTCTCCAGAGAAGCAATGAGCCGAGTAAAACACAGAAGGAAGATGGCGTCTTGCTGTCATTCTaGTACCAAATTATGGTGTCG | + |
|
Preference number: 5 (lower is better) Translates to: CICLQRSNEPSKTQKEDGVLLSF*YQIMVS Trigger: CGACACCATAATTTGGTACAAGAATGACAGCAAGAC...GCCATCTTCCTTCTGTGTTTTACTCGGCTCATTGCTTCTCTGGAGACAAATGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027241.11 ENSMUST00000114795.3 |
||
| CDS-3UTR CAA 90 bp | TGCATTTGTCTCCAGAGAAGCAATGAGCCGAGTAAAACACAGAAGGAAGATGGCTCCTGGATGAGAGCATaGTATATGGCTATTTGCTCT | + |
|
Preference number: 5 (lower is better) Translates to: CICLQRSNEPSKTQKEDGSWMRA*YMAICS Trigger: AGAGCAAATAGCCATATACAATGCTCTCATCCAGGA...GCCATCTTCCTTCTGTGTTTTACTCGGCTCATTGCTTCTCTGGAGACAAATGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027241.11 ENSMUST00000114795.3 |
||
| CDS-3UTR CAA 90 bp | AAGATGGCACGACAGCCATTGCAGGGTGGAAGCTTGATTAGAAGAAACCTGTGGCATTTTCTCATAGTCTaGGATTTTCTCCAACTCAAG | + |
|
Preference number: 5 (lower is better) Translates to: KMARQPLQGGSLIRRNLWHFLIV*DFLQLK Trigger: CTTGAGTTGGAGAAAATCCAAGACTATGAGAAAATG...CCACAGGTTTCTTCTAATCAAGCTTCCACCCTGCAATGGCTGTCGTGCCATCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027241.11 ENSMUST00000114795.3 |
||
| CDS CCA 90 bp | AAACAAAAGTATCTAAGTCTGAGAAGGACCCCTCTCCCAGGGTCTTaGGATAAAGAATATAGGCATCGTATGTCTTTCCATCTGAAGCTT | + |
|
Preference number: 5 (lower is better) Translates to: KQKYLSLRRTPLPGS*DKEYRHRMSFHLKL Trigger: AAGCTTCAGATGGAAAGACATACGATGCCTATATTCTTTATCCCAAGACCCTGGGAGAGGGGTCCTTCTCAGACTTAGATACTTTTGTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027241.11 ENSMUST00000114795.3 |
||
| CDS GCA 90 bp | ATGGGGGTCTTGCTGTCATTCTTGTACCAAATTATGGTGTCGCCGTaGATTTTATTTGGAGTAAGAGGACACTTGCGAATATCAATTTCA | + |
|
Preference number: 5 (lower is better) Translates to: MGVLLSFLYQIMVSP*ILFGVRGHLRISIS Trigger: TGAAATTGATATTCGCAAGTGTCCTCTTACTCCAAATAAAATGCACGGCGACACCATAATTTGGTACAAGAATGACAGCAAGACCCCCAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027241.11 ENSMUST00000114795.3 |
||
| CDS-3UTR CAA 90 bp | CTGGAAAATATCTGGAAGAAATGCCTTCCACTGTGGGGTATCAGTAAACCTCACAGTGTGTATTTTCTTTaGGTTGAAGGATGTTCCACA | + |
|
Preference number: 5 (lower is better) Translates to: LENIWKKCLPLWGISKPHSVYFL*VEGCST Trigger: TGTGGAACATCCTTCAACCAAAAGAAAATACACACT...GTGAGGTTTACTGATACCCCACAGTGGAAGGCATTTCTTCCAGATATTTTCCAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000027241.11 ENSMUST00000114795.3 |
||
| CDS CCA 90 bp | TTGAGTTTCTTACTATACAATAGTAATATCCTGAGTCCTCCACCTTaGCAGGTACAAACCAAAGATGTTCATTCTGCTGATGAATCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: LSFLLYNSNILSPPP*QVQTKDVHSADESW Trigger: CCAGGATTCATCAGCAGAATGAACATCTTTGGTTTGTACCTGCCAAGGTGGAGGACTCAGGATATTACTATTGTATAGTAAGAAACTCAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027241.11 ENSMUST00000114795.3 |
||
| CDS CCA 72 bp | CACAAGACTTCCATCCCCGGCAATGTGGAGCCGCTGTaGGAAGGTGGCCTGTGTGCTGTAACACAAGCCAGG | + |
|
Preference number: 6 (lower is better) Translates to: HKTSIPGNVEPL*EGGLCAVTQAR Trigger: CCTGGCTTGTGTTACAGCACACAGGCCACCTTCCCACAGCGGCTCCACATTGCCGGGGATGGAAGTCTTGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027241.11 ENSMUST00000114795.3 |
||
| CDS CCA 72 bp | TTCCATCCCCGGCAATGTGGAGCCGCTGTGGGAAGGTaGCCTGTGTGCTGTAACACAAGCCAGGGTCATTCT | + |
|
Preference number: 6 (lower is better) Translates to: FHPRQCGAAVGR*PVCCNTSQGHS Trigger: AGAATGACCCTGGCTTGTGTTACAGCACACAGGCCACCTTCCCACAGCGGCTCCACATTGCCGGGGATGGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027241.11 ENSMUST00000114795.3 |
||
| CDS GCA 72 bp | GAATCCTGGAGTCCCGGTCCGCTGATATGGGGGTCTTaGTGTCATTCTTGTACCAAATTATGGTGTCGCCGT | + |
|
Preference number: 6 (lower is better) Translates to: ESWSPGPLIWGS*CHSCTKLWCRR Trigger: ACGGCGACACCATAATTTGGTACAAGAATGACAGCAAGACCCCCATATCAGCGGACCGGGACTCCAGGATTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027241.11 ENSMUST00000114795.3 |
||
| CDS TCA 72 bp | TCCACTTCCAGTAGACAAGGTCTGAGAACTGGCCCGTaGCGTTGCAGATCAGTTGTATCATTGATCCTGGGT | + |
|
Preference number: 6 (lower is better) Translates to: STSSRQGLRTGP*RCRSVVSLILG Trigger: ACCCAGGATCAATGATACAACTGATCTGCAACGTCACGGGCCAGTTCTCAGACCTTGTCTACTGGAAGTGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027241.11 ENSMUST00000114795.3 |
||
| CDS CCA 72 bp | TCTGCTGATGAATCCTGGAGTCCCGGTCCGCTGATATaGGGGTCTTGCTGTCATTCTTGTACCAAATTATGG | + |
|
Preference number: 6 (lower is better) Translates to: SADESWSPGPLI*GSCCHSCTKLW Trigger: CCATAATTTGGTACAAGAATGACAGCAAGACCCCCATATCAGCGGACCGGGACTCCAGGATTCATCAGCAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027241.11 ENSMUST00000114795.3 |
||
| CDS CCA 72 bp | GTACAAACCAAAGATGTTCATTCTGCTGATGAATCCTaGAGTCCCGGTCCGCTGATATGGGGGTCTTGCTGT | + |
|
Preference number: 6 (lower is better) Translates to: VQTKDVHSADES*SPGPLIWGSCC Trigger: ACAGCAAGACCCCCATATCAGCGGACCGGGACTCCAGGATTCATCAGCAGAATGAACATCTTTGGTTTGTAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027241.11 ENSMUST00000114795.3 |
||
| CDS TCA 72 bp | TTCATTCTGCTGATGAATCCTGGAGTCCCGGTCCGCTaGTATGGGGGTCTTGCTGTCATTCTTGTACCAAAT | + |
|
Preference number: 6 (lower is better) Translates to: FILLMNPGVPVR*YGGLAVILVPN Trigger: ATTTGGTACAAGAATGACAGCAAGACCCCCATATCAGCGGACCGGGACTCCAGGATTCATCAGCAGAATGAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027241.11 ENSMUST00000114795.3 |
||
| CDS CAA 90 bp | ATCCTGGAGTCCCGGTCCGCTGATATGGGGGTCTTGCTGTCATTCTaGTACCAAATTATGGTGTCGCCGTGCATTTTATTTGGAGTAAGA | + |
|
Preference number: 6 (lower is better) Translates to: ILESRSADMGVLLSF*YQIMVSPCILFGVR Trigger: TCTTACTCCAAATAAAATGCACGGCGACACCATAATTTGGTACAAGAATGACAGCAAGACCCCCATATCAGCGGACCGGGACTCCAGGAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027241.11 ENSMUST00000114795.3 |
||
| CDS CAA 90 bp | TCCAACTCAAGCAGGACGATTTTAATTCCTTCCTGGATGAGAGCATaGTATATGGCTATTTGCTCTTCAGATGACTGGCCCAGCCAGCTG | + |
|
Preference number: 6 (lower is better) Translates to: SNSSRTILIPSWMRA*YMAICSSDDWPSQL Trigger: CAGCTGGCTGGGCCAGTCATCTGAAGAGCAAATAGCCATATACAATGCTCTCATCCAGGAAGGAATTAAAATCGTCCTGCTTGAGTTGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027241.11 ENSMUST00000114795.3 |
||
| CDS CAA 90 bp | TCGATCGTCTCATTCCGAGGGCTCAGGATAACAGGTCTGTCCCTCTaGTTTTCATCTATTGTGATAAATTGTATTACTCGTGTGACCGGA | + |
|
Preference number: 6 (lower is better) Translates to: SIVSFRGLRITGLSL*FSSIVINCITRVTG Trigger: TCCGGTCACACGAGTAATACAATTTATCACAATAGATGAAAACAAGAGGGACAGACCTGTTATCCTGAGCCCTCGGAATGAGACGATCGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027241.11 ENSMUST00000114795.3 |
||
| CDS TCA 72 bp | AGCAGGAGTCCCTGTACCAAAGCACTATGTCAACCTTaGAGACTTTATAGATGCACACACAGCATACAATTG | + |
|
Preference number: 6 (lower is better) Translates to: SRSPCTKALCQP*RLYRCTHSIQL Trigger: CAATTGTATGCTGTGTGTGCATCTATAAAGTCTTCAAGGTTGACATAGTGCTTTGGTACAGGGACTCCTGCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027241.11 ENSMUST00000114795.3 |
||
| CDS TCA 72 bp | TGGTATCTTCTCCAACATAGTCATCCCTTCCATAAATaGACAGCTTGTATCCAAACTGTCCCTCCAAGACCT | + |
|
Preference number: 6 (lower is better) Translates to: WYLLQHSHPFHK*TACIQTVPPRP Trigger: AGGTCTTGGAGGGACAGTTTGGATACAAGCTGTTCATTTATGGAAGGGATGACTATGTTGGAGAAGATACCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027241.11 ENSMUST00000114795.3 |
||
| CDS CAA 72 bp | AGGTCTGTCCCTCTTGTTTTCATCTATTGTGATAAATaGTATTACTCGTGTGACCGGATATTGCTTCCCCCG | + |
|
Preference number: 6 (lower is better) Translates to: RSVPLVFIYCDK*YYSCDRILLPP Trigger: CGGGGGAAGCAATATCCGGTCACACGAGTAATACAATTTATCACAATAGATGAAAACAAGAGGGACAGACCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027241.11 ENSMUST00000114795.3 |
||
| CDS CAA 90 bp | CAGGATAACAGGTCTGTCCCTCTTGTTTTCATCTATTGTGATAAATaGTATTACTCGTGTGACCGGATATTGCTTCCCCCGGAACGTATA | + |
|
Preference number: 6 (lower is better) Translates to: QDNRSVPLVFIYCDK*YYSCDRILLPPERI Trigger: TATACGTTCCGGGGGAAGCAATATCCGGTCACACGAGTAATACAATTTATCACAATAGATGAAAACAAGAGGGACAGACCTGTTATCCTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027241.11 ENSMUST00000114795.3 |
||
| CDS CAA 72 bp | TCATTCCGAGGGCTCAGGATAACAGGTCTGTCCCTCTaGTTTTCATCTATTGTGATAAATTGTATTACTCGT | + |
|
Preference number: 6 (lower is better) Translates to: SFRGLRITGLSL*FSSIVINCITR Trigger: ACGAGTAATACAATTTATCACAATAGATGAAAACAAGAGGGACAGACCTGTTATCCTGAGCCCTCGGAATGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027241.11 ENSMUST00000114795.3 |
||
| CDS CCA 72 bp | CTTGTACCAAATTATGGTGTCGCCGTGCATTTTATTTaGAGTAAGAGGACACTTGCGAATATCAATTTCATT | + |
|
Preference number: 6 (lower is better) Translates to: LVPNYGVAVHFI*SKRTLANINFI Trigger: AATGAAATTGATATTCGCAAGTGTCCTCTTACTCCAAATAAAATGCACGGCGACACCATAATTTGGTACAAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027241.11 ENSMUST00000114795.3 |
||
| CDS CAA 90 bp | TGCGAATATCAATTTCATTTACAGATAAAAACAAAACGATCTGATTaGGATATTCTGTACATACGTCAATCTCCAGCGACAGCAGAGGCA | + |
|
Preference number: 6 (lower is better) Translates to: CEYQFHLQIKTKRSD*DILYIRQSPATAEA Trigger: TGCCTCTGCTGTCGCTGGAGATTGACGTATGTACAGAATATCCAAATCAGATCGTTTTGTTTTTATCTGTAAATGAAATTGATATTCGCA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027241.11 ENSMUST00000114795.3 |
||