Pregenerated sensors for IL1F10 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000046845

Ensembl transcript IDs: ENSMUST00000058056.2

Found 13 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS GCA 90 bp	GGTCCCTCTCTTGTCTTTACACACGCCAGGCAGCAACTTCCTCCCTaGATCCCCAGGAAGATGGGGACCTTGGAGCGGTCTAGGCCTCGG	+
Preference number: 5 (lower is better) Translates to: GPSLVFTHARQQLPP*IPRKMGTLERSRPR Trigger: CCGAGGCCTAGACCGCTCCAAGGTCCCCATCTTCCTGGGGATGCAGGGAGGAAGTTGCTGCCTGGCGTGTGTAAAGACAAGAGAGGGACC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058056.2
CDS CCA 90 bp	GGGCAGGCAGCAGCCTCAAGCCTGAAGGCAGATCCCAAGCTTCTCTaGAAAAAGGTGAAACGGGTGGTTTGTTCACCTCCCTTGTATAGG	+
Preference number: 5 (lower is better) Translates to: GQAAASSLKADPKLL*KKVKRVVCSPPLYR Trigger: CCTATACAAGGGAGGTGAACAAACCACCCGTTTCACCTTTTTCCAGAGAAGCTTGGGATCTGCCTTCAGGCTTGAGGCTGCTGCCTGCCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000058056.2
CDS GCA 90 bp	TGTTCACCTCCCTTGTATAGGTCCTCGATGTTCACATCCTCCAGCTaGAGGAGAGGTCCCTCTCTTGTCTTTACACACGCCAGGCAGCAA	+
Preference number: 5 (lower is better) Translates to: CSPPLYRSSMFTSSS*RRGPSLVFTHARQQ Trigger: TTGCTGCCTGGCGTGTGTAAAGACAAGAGAGGGACCTCTCCTGCAGCTGGAGGATGTGAACATCGAGGACCTATACAAGGGAGGTGAACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058056.2
CDS GCA 90 bp	TCCCAGCAGGAGCTGGCCATTCCGTGTGTACAAAGCCTTTTGATGTaGATCCTTGATTATGTAGTATCTTGCCATGGGAAGGGAGCACAT	+
Preference number: 5 (lower is better) Translates to: SQQELAIPCVQSLLM*ILDYVVSCHGKGAH Trigger: ATGTGCTCCCTTCCCATGGCAAGATACTACATAATCAAGGATGCACATCAAAAGGCTTTGTACACACGGAATGGCCAGCTCCTGCTGGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058056.2
CDS CAA 90 bp	GGTCCTCGATGTTCACATCCTCCAGCTGCAGGAGAGGTCCCTCTCTaGTCTTTACACACGCCAGGCAGCAACTTCCTCCCTGCATCCCCA	+
Preference number: 6 (lower is better) Translates to: GPRCSHPPAAGEVPL*SLHTPGSNFLPASP Trigger: TGGGGATGCAGGGAGGAAGTTGCTGCCTGGCGTGTGTAAAGACAAGAGAGGGACCTCTCCTGCAGCTGGAGGATGTGAACATCGAGGACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058056.2
CDS CAA 72 bp	CAACTTCCTCCCTGCATCCCCAGGAAGATGGGGACCTaGGAGCGGTCTAGGCCTCGGTTAGGAAGGATACAG	+
Preference number: 6 (lower is better) Translates to: QLPPCIPRKMGT*ERSRPRLGRIQ Trigger: CTGTATCCTTCCTAACCGAGGCCTAGACCGCTCCAAGGTCCCCATCTTCCTGGGGATGCAGGGAGGAAGTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058056.2
CDS CAA 72 bp	TGTTCACATCCTCCAGCTGCAGGAGAGGTCCCTCTCTaGTCTTTACACACGCCAGGCAGCAACTTCCTCCCT	+
Preference number: 6 (lower is better) Translates to: CSHPPAAGEVPL*SLHTPGSNFLP Trigger: AGGGAGGAAGTTGCTGCCTGGCGTGTGTAAAGACAAGAGAGGGACCTCTCCTGCAGCTGGAGGATGTGAACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058056.2
CDS GCA 72 bp	CCCTTGTATAGGTCCTCGATGTTCACATCCTCCAGCTaGAGGAGAGGTCCCTCTCTTGTCTTTACACACGCC	+
Preference number: 6 (lower is better) Translates to: PLYRSSMFTSSS*RRGPSLVFTHA Trigger: GGCGTGTGTAAAGACAAGAGAGGGACCTCTCCTGCAGCTGGAGGATGTGAACATCGAGGACCTATACAAGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058056.2
CDS CCA 72 bp	GCAGCCTCAAGCCTGAAGGCAGATCCCAAGCTTCTCTaGAAAAAGGTGAAACGGGTGGTTTGTTCACCTCCC	+
Preference number: 6 (lower is better) Translates to: AASSLKADPKLL*KKVKRVVCSPP Trigger: GGGAGGTGAACAAACCACCCGTTTCACCTTTTTCCAGAGAAGCTTGGGATCTGCCTTCAGGCTTGAGGCTGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000058056.2
CDS CAA 90 bp	AGGGTCTCCCAGCAGGAGCTGGCCATTCCGTGTGTACAAAGCCTTTaGATGTGCATCCTTGATTATGTAGTATCTTGCCATGGGAAGGGA	+
Preference number: 6 (lower is better) Translates to: RVSQQELAIPCVQSL*MCILDYVVSCHGKG Trigger: TCCCTTCCCATGGCAAGATACTACATAATCAAGGATGCACATCAAAAGGCTTTGTACACACGGAATGGCCAGCTCCTGCTGGGAGACCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058056.2
CDS GCA 72 bp	GAGCTGGCCATTCCGTGTGTACAAAGCCTTTTGATGTaGATCCTTGATTATGTAGTATCTTGCCATGGGAAG	+
Preference number: 6 (lower is better) Translates to: ELAIPCVQSLLM*ILDYVVSCHGK Trigger: CTTCCCATGGCAAGATACTACATAATCAAGGATGCACATCAAAAGGCTTTGTACACACGGAATGGCCAGCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058056.2
CDS CAA 72 bp	CAGCAGGAGCTGGCCATTCCGTGTGTACAAAGCCTTTaGATGTGCATCCTTGATTATGTAGTATCTTGCCAT	+
Preference number: 6 (lower is better) Translates to: QQELAIPCVQSL*MCILDYVVSCH Trigger: ATGGCAAGATACTACATAATCAAGGATGCACATCAAAAGGCTTTGTACACACGGAATGGCCAGCTCCTGCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058056.2
CDS TCA 72 bp	CATTCCGTGTGTACAAAGCCTTTTGATGTGCATCCTTaGTTATGTAGTATCTTGCCATGGGAAGGGAGCACA	+
Preference number: 6 (lower is better) Translates to: HSVCTKPFDVHP*LCSILPWEGST Trigger: TGTGCTCCCTTCCCATGGCAAGATACTACATAATCAAGGATGCACATCAAAAGGCTTTGTACACACGGAATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058056.2