Pregenerated sensors for IL18RAP (Mus musculus)
Ensembl gene IDs: ENSMUSG00000026068Ensembl transcript IDs: ENSMUST00000027237.12
Found 153 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AGGCTAACAAGAAACCCAGGAAGCCTGGCCAGAGCCAGGGCACAGTaGTTCAACAAGTGTGGGTTCCTCCCCACTGCGATCCCACAGTGG | + |
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Preference number: 1 (lower is better) Translates to: RLTRNPGSLARARAQ*FNKCGFLPTAIPQW Trigger: CCACTGTGGGATCGCAGTGGGGAGGAACCCACACTTGTTGAACCACTGTGCCCTGGCTCTGGCCAGGCTTCCTGGGTTTCTTGTTAGCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027237.12 |
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| 3UTR TCA 90 bp | CACAGATGCCGCTTCATTCCACTGCCTGTCAAGCTTGCTTGGCACTaGGAGCAGAAAGGCTCAATTTCTATCAGCCTGATCCACACAGCA | + |
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Preference number: 1 (lower is better) Translates to: HRCRFIPLPVKLAWH*EQKGSISISLIHTA Trigger: TGCTGTGTGGATCAGGCTGATAGAAATTGAGCCTTTCTGCTCTCAGTGCCAAGCAAGCTTGACAGGCAGTGGAATGAAGCGGCATCTGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027237.12 |
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| 3UTR TCA 90 bp | CAAGATAAACCTGGCTGCACTGGCCAGAAGAGGTTTCTGAGTCTATaGTCTCTGAGAGAGGCTAACAAGAAACCCAGGAAGCCTGGCCAG | + |
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Preference number: 1 (lower is better) Translates to: QDKPGCTGQKRFLSL*SLREANKKPRKPGQ Trigger: CTGGCCAGGCTTCCTGGGTTTCTTGTTAGCCTCTCTCAGAGATCATAGACTCAGAAACCTCTTCTGGCCAGTGCAGCCAGGTTTATCTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027237.12 |
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| 3UTR GCA 90 bp | GGAAAAGTGCTGCTTACTGGTTTCCTATTTATGGCTTATTTACCCTaGTTACTCATAGCATCCAGGGCCACCAGCCCAGGGGTGACACTG | + |
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Preference number: 1 (lower is better) Translates to: GKVLLTGFLFMAYLP*LLIASRATSPGVTL Trigger: CAGTGTCACCCCTGGGCTGGTGGCCCTGGATGCTATGAGTAAGCAGGGTAAATAAGCCATAAATAGGAAACCAGTAAGCAGCACTTTTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027237.12 |
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| 3UTR GCA 90 bp | ACCCTAAAACCACAGATGCCGCTTCATTCCACTGCCTGTCAAGCTTaGTTGGCACTGAGAGCAGAAAGGCTCAATTTCTATCAGCCTGAT | + |
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Preference number: 1 (lower is better) Translates to: TLKPQMPLHSTACQA*LALRAERLNFYQPD Trigger: ATCAGGCTGATAGAAATTGAGCCTTTCTGCTCTCAGTGCCAAGCAAGCTTGACAGGCAGTGGAATGAAGCGGCATCTGTGGTTTTAGGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027237.12 |
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| 3UTR GCA 90 bp | TTCTTGCTGCTTGTCAACAAATGGGTGCCCTTATGCCCCACACTCTaGTTCATAATTGCTGCCTCTCTAGGTTGTAGACAACTACAAACC | + |
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Preference number: 1 (lower is better) Translates to: FLLLVNKWVPLCPTL*FIIAASLGCRQLQT Trigger: GGTTTGTAGTTGTCTACAACCTAGAGAGGCAGCAATTATGAAGCAGAGTGTGGGGCATAAGGGCACCCATTTGTTGACAAGCAGCAAGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027237.12 |
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| 3UTR CCA 90 bp | GCCAGGATGCTGGTTAGTGCCAAAGCCAAAGTGGTTTTTATGATGTaGTTCTTCTGCGAAGGAGGATCAGAAGAGCAATTCACACAGACA | + |
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Preference number: 1 (lower is better) Translates to: ARMLVSAKAKVVFMM*FFCEGGSEEQFTQT Trigger: TGTCTGTGTGAATTGCTCTTCTGATCCTCCTTCGCAGAAGAACCACATCATAAAAACCACTTTGGCTTTGGCACTAACCAGCATCCTGGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027237.12 |
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| 3UTR GCA 90 bp | CTGGTTAGTGCCAAAGCCAAAGTGGTTTTTATGATGTGGTTCTTCTaGGAAGGAGGATCAGAAGAGCAATTCACACAGACACCAATGGGT | + |
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Preference number: 1 (lower is better) Translates to: LVSAKAKVVFMMWFF*EGGSEEQFTQTPMG Trigger: ACCCATTGGTGTCTGTGTGAATTGCTCTTCTGATCCTCCTTCGCAGAAGAACCACATCATAAAAACCACTTTGGCTTTGGCACTAACCAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027237.12 |
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| 3UTR CCA 90 bp | CTGGGCACAGGAACTGAAGCAGAGCCATGGAAAAGTGCTGCTTACTaGTTTCCTATTTATGGCTTATTTACCCTGCTTACTCATAGCATC | + |
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Preference number: 1 (lower is better) Translates to: LGTGTEAEPWKSAAY*FPIYGLFTLLTHSI Trigger: GATGCTATGAGTAAGCAGGGTAAATAAGCCATAAATAGGAAACCAGTAAGCAGCACTTTTCCATGGCTCTGCTTCAGTTCCTGTGCCCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027237.12 |
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| 3UTR GCA 90 bp | TGCAGCCAGAAAACGTGGCTTTGCTTTCATTCTGCTGAGCCTAGCTaGTCAGCCAAAGTCTTGCAAACACAGGAATTTTGTCTTGATTAT | + |
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Preference number: 1 (lower is better) Translates to: CSQKTWLCFHSAEPS*SAKVLQTQEFCLDY Trigger: ATAATCAAGACAAAATTCCTGTGTTTGCAAGACTTTGGCTGAGCAGCTAGGCTCAGCAGAATGAAAGCAAAGCCACGTTTTCTGGCTGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027237.12 |
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| 3UTR GCA 90 bp | TTCTGCTTTCATATTTGTACAAGTCTGAGGCACTGTAAAGCCAAATaGTTGGGAGCTCAGTTATCTTGGAACAAGATAAACCTGGCTGCA | + |
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Preference number: 1 (lower is better) Translates to: FCFHICTSLRHCKAK*LGAQLSWNKINLAA Trigger: TGCAGCCAGGTTTATCTTGTTCCAAGATAACTGAGCTCCCAAGCATTTGGCTTTACAGTGCCTCAGACTTGTACAAATATGAAAGCAGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027237.12 |
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| 3UTR GCA 90 bp | AATTCATTTGTGAGTCGTGATATTTTCTGCCAACAACAGATACCATaGATGTTGTTCACCTGCAGGTCTAGAAACATATACCTAGTTCAT | + |
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Preference number: 1 (lower is better) Translates to: NSFVSRDIFCQQQIP*MLFTCRSRNIYLVH Trigger: ATGAACTAGGTATATGTTTCTAGACCTGCAGGTGAACAACATGCATGGTATCTGTTGTTGGCAGAAAATATCACGACTCACAAATGAATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027237.12 |
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| 3UTR-3UTR GCA 90 bp | GGCTTATTTACCCTGCTTACTCATAGCATCCAGGGCCACCAGCCCAGGGGTGACAGGTGCTGCCTTCACTaGTCACATGATGAGCCACCC | + |
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Preference number: 2 (lower is better) Translates to: GLFTLLTHSIQGHQPRGDRCCLH*SHDEPP Trigger: GGGTGGCTCATCATGTGAGCAGTGAAGGCAGCACCT...GTCACCCCTGGGCTGGTGGCCCTGGATGCTATGAGTAAGCAGGGTAAATAAGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027237.12 |
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| 3UTR-3UTR TCA 90 bp | GGTTTCCTATTTATGGCTTATTTACCCTGCTTACTCATAGCATCCAGGGCCACCGGTTCTCAGGGGATGTaGCTCATGATGTGGGAGCCA | + |
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Preference number: 2 (lower is better) Translates to: GFLFMAYLPCLLIASRATGSQGM*LMMWEP Trigger: TGGCTCCCACATCATGAGTCACATCCCCTGAGAACC...GGTGGCCCTGGATGCTATGAGTAAGCAGGGTAAATAAGCCATAAATAGGAAACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027237.12 |
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| 3UTR CAA 90 bp | CTAAAACCACAGATGCCGCTTCATTCCACTGCCTGTCAAGCTTGCTaGGCACTGAGAGCAGAAAGGCTCAATTTCTATCAGCCTGATCCA | + |
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Preference number: 2 (lower is better) Translates to: LKPQMPLHSTACQAC*ALRAERLNFYQPDP Trigger: TGGATCAGGCTGATAGAAATTGAGCCTTTCTGCTCTCAGTGCCAAGCAAGCTTGACAGGCAGTGGAATGAAGCGGCATCTGTGGTTTTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027237.12 |
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| 3UTR-3UTR GCA 90 bp | GAATCAAGACAATGTACCACAGGCTTGTCCATAGTCCAATCTAGTGGGGGCTCTAGCCAGTTCATGAGGTaGTGCCTTCACTGCTCACAT | + |
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Preference number: 2 (lower is better) Translates to: ESRQCTTGLSIVQSSGGSSQFMR*CLHCSH Trigger: ATGTGAGCAGTGAAGGCAGCACCTCATGAACTGGCT...AGAGCCCCCACTAGATTGGACTATGGACAAGCCTGTGGTACATTGTCTTGATTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027237.12 |
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| 3UTR-3UTR TCA 90 bp | CCATTCCTAAATCTGAATCCTGTAAAGAGTGTTCCAGCCAAGAGGAGGGCTCTGAAGCTTGCTTGGCACTaGGAGCAGAAAGGCTCAATT | + |
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Preference number: 2 (lower is better) Translates to: PFLNLNPVKSVPAKRRALKLAWH*EQKGSI Trigger: AATTGAGCCTTTCTGCTCTCAGTGCCAAGCAAGCTT...CAGAGCCCTCCTCTTGGCTGGAACACTCTTTACAGGATTCAGATTTAGGAATGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027237.12 |
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| 3UTR-3UTR GCA 90 bp | ATACCATGCATGTTGTTCACCTGCAGGTCTAGAAACATATACCTAGTTCATGCCGCCGCTTCATTCCACTaGCTGTCAAGCTTGCTTGGC | + |
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Preference number: 2 (lower is better) Translates to: IPCMLFTCRSRNIYLVHAAASFH*LSSLLG Trigger: GCCAAGCAAGCTTGACAGGCAGTGGAATGAAGCGGC...GGCATGAACTAGGTATATGTTTCTAGACCTGCAGGTGAACAACATGCATGGTAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027237.12 |
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| 3UTR-3UTR GCA 90 bp | AAATGGGTGCCCTTATGCCCCACACTCTGCTTCATAATTGCTGCCTCTCTAGGTAGTGCAAAACAGGCATaGGTGCATGAATGTTGGACA | + |
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Preference number: 2 (lower is better) Translates to: KWVPLCPTLCFIIAASLGSAKQA*VHECWT Trigger: TGTCCAACATTCATGCACGCATGCCTGTTTTGCACT...ACCTAGAGAGGCAGCAATTATGAAGCAGAGTGTGGGGCATAAGGGCACCCATTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027237.12 |
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| 3UTR-3UTR CCA 90 bp | TCCTCTTTAGCTTTGAGATTTCCAGCCAGGATGCTGGTTAGTGCCAAAGCCAAATGGGTCAGATGTCAGTaGATAACCCACTCTGCCTGT | + |
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Preference number: 2 (lower is better) Translates to: SSLALRFPARMLVSAKAKWVRCQ*ITHSAC Trigger: ACAGGCAGAGTGGGTTATCCACTGACATCTGACCCA...TTTGGCTTTGGCACTAACCAGCATCCTGGCTGGAAATCTCAAAGCTAAAGAGGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027237.12 |
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| 3UTR-3UTR CCA 90 bp | GGTTTCCTATTTATGGCTTATTTACCCTGCTTACTCATAGCATCCAGGGCCACCTTCCAGCCAGGATGCTaGTTAGTGCCAAAGCCAAAG | + |
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Preference number: 2 (lower is better) Translates to: GFLFMAYLPCLLIASRATFQPGC*LVPKPK Trigger: CTTTGGCTTTGGCACTAACCAGCATCCTGGCTGGAA...GGTGGCCCTGGATGCTATGAGTAAGCAGGGTAAATAAGCCATAAATAGGAAACC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027237.12 |
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| 3UTR-3UTR CCA 90 bp | TCAAAGGGCATAAACAGCCACATCAACTCAAACCCTGTTTCAGCTATAGACCAACACACGGCAGAGGTCTaGAGTATTGCTCTGTGTCTG | + |
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Preference number: 2 (lower is better) Translates to: SKGINSHINSNPVSAIDQHTAEV*SIALCL Trigger: CAGACACAGAGCAATACTCCAGACCTCTGCCGTGTG...TTGGTCTATAGCTGAAACAGGGTTTGAGTTGATGTGGCTGTTTATGCCCTTTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027237.12 |
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| 3UTR-3UTR CCA 90 bp | AACTGTCTGGGAGACCATATAGGGTCCATAAGGAAAGGTCTGCAGTGTGTCCTAGTGGTTTTTATGATGTaGTTCTTCTGCGAAGGAGGA | + |
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Preference number: 2 (lower is better) Translates to: NCLGDHIGSIRKGLQCVLVVFMM*FFCEGG Trigger: TCCTCCTTCGCAGAAGAACCACATCATAAAAACCAC...TAGGACACACTGCAGACCTTTCCTTATGGACCCTATATGGTCTCCCAGACAGTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027237.12 |
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| 3UTR-3UTR GCA 90 bp | AACGACGACCCAGCCCTTAAACACATCATCTTGTTACTAAGGAAGACTTCCCCTCATATACCTAGTTCATaGCTTCAAGTGGGTCCTGTA | + |
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Preference number: 2 (lower is better) Translates to: NDDPALKHIILLLRKTSPHIPSS*LQVGPV Trigger: TACAGGACCCACTTGAAGGCATGAACTAGGTATATG...AGGGGAAGTCTTCCTTAGTAACAAGATGATGTGTTTAAGGGCTGGGTCGTCGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027237.12 |
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| 3UTR-3UTR GCA 90 bp | AACGACGACCCAGCCCTTAAACACATCATCTTGTTACTAAGGAAGACTTCCCCTAGCAGGCAAATGACATaGAAAGCTATGGCATCTGTT | + |
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Preference number: 2 (lower is better) Translates to: NDDPALKHIILLLRKTSPSRQMT*KAMASV Trigger: AACAGATGCCATAGCTTTGCATGTCATTTGCCTGCT...AGGGGAAGTCTTCCTTAGTAACAAGATGATGTGTTTAAGGGCTGGGTCGTCGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027237.12 |
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| 3UTR CAA 90 bp | TGCTTTCATATTTGTACAAGTCTGAGGCACTGTAAAGCCAAATGCTaGGGAGCTCAGTTATCTTGGAACAAGATAAACCTGGCTGCACTG | + |
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Preference number: 2 (lower is better) Translates to: CFHICTSLRHCKAKC*GAQLSWNKINLAAL Trigger: CAGTGCAGCCAGGTTTATCTTGTTCCAAGATAACTGAGCTCCCAAGCATTTGGCTTTACAGTGCCTCAGACTTGTACAAATATGAAAGCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027237.12 |
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| 3UTR-3UTR TCA 90 bp | AACTGTCTGGGAGACCATATAGGGTCCATAAGGAAAGGTCTGCAGTGTGTCCTACAATTTGGAAGAACTTaGCTCAAATTTTTGACCCTC | + |
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Preference number: 2 (lower is better) Translates to: NCLGDHIGSIRKGLQCVLQFGRT*LKFLTL Trigger: GAGGGTCAAAAATTTGAGTCAAGTTCTTCCAAATTG...TAGGACACACTGCAGACCTTTCCTTATGGACCCTATATGGTCTCCCAGACAGTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027237.12 |
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| 3UTR-3UTR TCA 90 bp | TCCTTCCCACAAAAACTTCCTCCAGGGATAATTTATGCTCTTTGGTTCCTCTTTCTCTCAGCAGGCAAATaGCATGCAAAGCTATGGCAT | + |
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Preference number: 2 (lower is better) Translates to: SFPQKLPPGIIYALWFLFLSAGK*HAKLWH Trigger: ATGCCATAGCTTTGCATGTCATTTGCCTGCTGAGAG...AAAGAGGAACCAAAGAGCATAAATTATCCCTGGAGGAAGTTTTTGTGGGAAGGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027237.12 |
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| 3UTR-3UTR GCA 90 bp | AAAGGGTTTATTCAGTCTTACAATTCTCAGGTCCATTGTCCAGGGAGTACAAGCTTATGCCCCACACTCTaGTTCATAATTGCTGCCTCT | + |
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Preference number: 2 (lower is better) Translates to: KGFIQSYNSQVHCPGSTSLCPTL*FIIAAS Trigger: AGAGGCAGCAATTATGAAGCAGAGTGTGGGGCATAA...GCTTGTACTCCCTGGACAATGGACCTGAGAATTGTAAGACTGAATAAACCCTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027237.12 |
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| 3UTR-3UTR GCA 90 bp | AAAGGGTTTATTCAGTCTTACAATTCTCAGGTCCATTGTCCAGGGAGTACAAGCCAGAAAACGTGGCTTTaGTTTCATTCTGCTGAGCCT | + |
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Preference number: 2 (lower is better) Translates to: KGFIQSYNSQVHCPGSTSQKTWL*FHSAEP Trigger: AGGCTCAGCAGAATGAAAGCAAAGCCACGTTTTCTG...GCTTGTACTCCCTGGACAATGGACCTGAGAATTGTAAGACTGAATAAACCCTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027237.12 |
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| 3UTR-3UTR TCA 90 bp | GGTTTCCTATTTATGGCTTATTTACCCTGCTTACTCATAGCATCCAGGGCCACCATATTTGTACAAGTCTaGGGCACTGTAAAGCCAAAT | + |
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Preference number: 2 (lower is better) Translates to: GFLFMAYLPCLLIASRATIFVQV*GTVKPN Trigger: ATTTGGCTTTACAGTGCCTCAGACTTGTACAAATAT...GGTGGCCCTGGATGCTATGAGTAAGCAGGGTAAATAAGCCATAAATAGGAAACC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027237.12 |
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| 3UTR-3UTR GCA 90 bp | GTCATCTCACTGGACCTAGCTATGGAAAAGAAGACATTCTATAAACATGGACTGCAACAACAGATACCATaGATGTTGTTCACCTGCAGG | + |
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Preference number: 2 (lower is better) Translates to: VISLDLAMEKKTFYKHGLQQQIP*MLFTCR Trigger: CCTGCAGGTGAACAACATGCATGGTATCTGTTGTTG...CAGTCCATGTTTATAGAATGTCTTCTTTTCCATAGCTAGGTCCAGTGAGATGAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027237.12 |
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| 3UTR-3UTR GCA 90 bp | GAGGGCTCTGTCCTCTCTGTTATATACAATTTGGAAGAACTTGACTCAAATTTTAGAGGTCTGGAGTATTaGTCTGTGTCTGTTCCAGGA | + |
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Preference number: 2 (lower is better) Translates to: EGSVLSVIYNLEELDSNFRGLEY*SVSVPG Trigger: TCCTGGAACAGACACAGAGCAATACTCCAGACCTCT...AAAATTTGAGTCAAGTTCTTCCAAATTGTATATAACAGAGAGGACAGAGCCCTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027237.12 |
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| 3UTR-3UTR GCA 90 bp | TCAAAGGGCATAAACAGCCACATCAACTCAAACCCTGTTTCAGCTATAGACCAACATCTGTTGTATTCTTaGTGCTTGTCAACAAATGGG | + |
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Preference number: 2 (lower is better) Translates to: SKGINSHINSNPVSAIDQHLLYS*CLSTNG Trigger: CCCATTTGTTGACAAGCAGCAAGAATACAACAGATG...TTGGTCTATAGCTGAAACAGGGTTTGAGTTGATGTGGCTGTTTATGCCCTTTGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027237.12 |
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| 3UTR-3UTR GCA 90 bp | GAGGGCTCTGTCCTCTCTGTTATATACAATTTGGAAGAACTTGACTCAAATTTTAGTCGTGATATTTTCTaGCAACAACAGATACCATGC | + |
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Preference number: 2 (lower is better) Translates to: EGSVLSVIYNLEELDSNFSRDIF*QQQIPC Trigger: GCATGGTATCTGTTGTTGGCAGAAAATATCACGACT...AAAATTTGAGTCAAGTTCTTCCAAATTGTATATAACAGAGAGGACAGAGCCCTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027237.12 |
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| 3UTR-3UTR CCA 90 bp | GTCATCTCACTGGACCTAGCTATGGAAAAGAAGACATTCTATAAACATGGACTGATTGGACTAATGATCTaGGACAAATTAGTCTCTACT | + |
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Preference number: 2 (lower is better) Translates to: VISLDLAMEKKTFYKHGLIGLMI*DKLVST Trigger: AGTAGAGACTAATTTGTCCCAGATCATTAGTCCAAT...CAGTCCATGTTTATAGAATGTCTTCTTTTCCATAGCTAGGTCCAGTGAGATGAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027237.12 |
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| 3UTR CAA 90 bp | AGCCTAGCTGCTCAGCCAAAGTCTTGCAAACACAGGAATTTTGTCTaGATTATTCCTCTTGTTTTAGTTGATATGCAAGGCATAAATATT | + |
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Preference number: 2 (lower is better) Translates to: SLAAQPKSCKHRNFV*IIPLVLVDMQGINI Trigger: AATATTTATGCCTTGCATATCAACTAAAACAAGAGGAATAATCAAGACAAAATTCCTGTGTTTGCAAGACTTTGGCTGAGCAGCTAGGCT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027237.12 |
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| 3UTR CCA 72 bp | CCTGGCCAGAGCCAGGGCACAGTGGTTCAACAAGTGTaGGTTCCTCCCCACTGCGATCCCACAGTGGTCCTT | + |
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Preference number: 3 (lower is better) Translates to: PGQSQGTVVQQV*VPPHCDPTVVL Trigger: AAGGACCACTGTGGGATCGCAGTGGGGAGGAACCCACACTTGTTGAACCACTGTGCCCTGGCTCTGGCCAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027237.12 |
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| 3UTR CCA 72 bp | AGAAACCCAGGAAGCCTGGCCAGAGCCAGGGCACAGTaGTTCAACAAGTGTGGGTTCCTCCCCACTGCGATC | + |
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Preference number: 3 (lower is better) Translates to: RNPGSLARARAQ*FNKCGFLPTAI Trigger: GATCGCAGTGGGGAGGAACCCACACTTGTTGAACCACTGTGCCCTGGCTCTGGCCAGGCTTCCTGGGTTTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027237.12 |
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| 3UTR TCA 72 bp | CTCTGCCTGTGGACCTCATTTGGTTCTCAGGGGATGTaGCTCATGATGTGGGAGCCAGTTCATGAGGTGCTG | + |
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Preference number: 3 (lower is better) Translates to: LCLWTSFGSQGM*LMMWEPVHEVL Trigger: CAGCACCTCATGAACTGGCTCCCACATCATGAGTCACATCCCCTGAGAACCAAATGAGGTCCACAGGCAGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027237.12 |
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| 3UTR GCA 72 bp | CCAGACCCTAAAACCACAGATGCCGCTTCATTCCACTaGCTGTCAAGCTTGCTTGGCACTGAGAGCAGAAAG | + |
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Preference number: 3 (lower is better) Translates to: PDPKTTDAASFH*LSSLLGTESRK Trigger: CTTTCTGCTCTCAGTGCCAAGCAAGCTTGACAGGCAGTGGAATGAAGCGGCATCTGTGGTTTTAGGGTCTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027237.12 |
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| 3UTR CCA 72 bp | CTCAGGGAAATGTGTGCTAAGCACACGGCAGAGGTCTaGAGTATTGCTCTGTGTCTGTTCCAGGAACCCAGA | + |
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Preference number: 3 (lower is better) Translates to: LREMCAKHTAEV*SIALCLFQEPR Trigger: TCTGGGTTCCTGGAACAGACACAGAGCAATACTCCAGACCTCTGCCGTGTGCTTAGCACACATTTCCCTGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027237.12 |
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| 3UTR TCA 72 bp | CCTGGCTGCACTGGCCAGAAGAGGTTTCTGAGTCTATaGTCTCTGAGAGAGGCTAACAAGAAACCCAGGAAG | + |
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Preference number: 3 (lower is better) Translates to: PGCTGQKRFLSL*SLREANKKPRK Trigger: CTTCCTGGGTTTCTTGTTAGCCTCTCTCAGAGATCATAGACTCAGAAACCTCTTCTGGCCAGTGCAGCCAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027237.12 |
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| 3UTR CCA 72 bp | ATGGCCTCCTCATCTAGATGGTGCAGCCAGAAAACGTaGCTTTGCTTTCATTCTGCTGAGCCTAGCTGCTCA | + |
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Preference number: 3 (lower is better) Translates to: MASSSRWCSQKT*LCFHSAEPSCS Trigger: TGAGCAGCTAGGCTCAGCAGAATGAAAGCAAAGCCACGTTTTCTGGCTGCACCATCTAGATGAGGAGGCCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027237.12 |
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| 3UTR-3UTR CAA 90 bp | TCCTCTTTAGCTTTGAGATTTCCAGCCAGGATGCTGGTTAGTGCCAAAGCCAAAGCCTGTGGACCTCATTaGGTTCTCAGGGGATGTGAC | + |
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Preference number: 3 (lower is better) Translates to: SSLALRFPARMLVSAKAKACGPH*VLRGCD Trigger: GTCACATCCCCTGAGAACCAAATGAGGTCCACAGGC...TTTGGCTTTGGCACTAACCAGCATCCTGGCTGGAAATCTCAAAGCTAAAGAGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027237.12 |
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| 3UTR TCA 72 bp | CGCTTCATTCCACTGCCTGTCAAGCTTGCTTGGCACTaGGAGCAGAAAGGCTCAATTTCTATCAGCCTGATC | + |
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Preference number: 3 (lower is better) Translates to: RFIPLPVKLAWH*EQKGSISISLI Trigger: GATCAGGCTGATAGAAATTGAGCCTTTCTGCTCTCAGTGCCAAGCAAGCTTGACAGGCAGTGGAATGAAGCG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027237.12 |
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| 3UTR GCA 72 bp | CCACAGATGCCGCTTCATTCCACTGCCTGTCAAGCTTaGTTGGCACTGAGAGCAGAAAGGCTCAATTTCTAT | + |
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Preference number: 3 (lower is better) Translates to: PQMPLHSTACQA*LALRAERLNFY Trigger: ATAGAAATTGAGCCTTTCTGCTCTCAGTGCCAAGCAAGCTTGACAGGCAGTGGAATGAAGCGGCATCTGTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027237.12 |
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| 3UTR-3UTR CAA 90 bp | CAAGTGGGTCCTGTAGGGACCCAGGAGATCATATGTTCTGTCTCACCTTCTATATTCTGTTCAGGCTACTaGGGAACTCTCAGGGAAATG | + |
|
Preference number: 3 (lower is better) Translates to: QVGPVGTQEIICSVSPSIFCSGY*GTLREM Trigger: CATTTCCCTGAGAGTTCCCAAGTAGCCTGAACAGAA...TATAGAAGGTGAGACAGAACATATGATCTCCTGGGTCCCTACAGGACCCACTTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027237.12 |
||
| 3UTR-3UTR CAA 90 bp | TCCTTCCCACAAAAACTTCCTCCAGGGATAATTTATGCTCTTTGGTTCCTCTTTGCCTGTCAAGCTTGCTaGGCACTGAGAGCAGAAAGG | + |
|
Preference number: 3 (lower is better) Translates to: SFPQKLPPGIIYALWFLFACQAC*ALRAER Trigger: CCTTTCTGCTCTCAGTGCCAAGCAAGCTTGACAGGC...AAAGAGGAACCAAAGAGCATAAATTATCCCTGGAGGAAGTTTTTGTGGGAAGGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027237.12 |
||
| 3UTR-3UTR CAA 90 bp | GAATCAAGACAATGTACCACAGGCTTGTCCATAGTCCAATCTAGTGGGGGCTCTTTGTATTCTTGCTGCTaGTCAACAAATGGGTGCCCT | + |
|
Preference number: 3 (lower is better) Translates to: ESRQCTTGLSIVQSSGGSLYSCC*STNGCP Trigger: AGGGCACCCATTTGTTGACAAGCAGCAAGAATACAA...AGAGCCCCCACTAGATTGGACTATGGACAAGCCTGTGGTACATTGTCTTGATTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027237.12 |
||
| 3UTR GCA 72 bp | CTTGTCAACAAATGGGTGCCCTTATGCCCCACACTCTaGTTCATAATTGCTGCCTCTCTAGGTTGTAGACAA | + |
|
Preference number: 3 (lower is better) Translates to: LVNKWVPLCPTL*FIIAASLGCRQ Trigger: TTGTCTACAACCTAGAGAGGCAGCAATTATGAAGCAGAGTGTGGGGCATAAGGGCACCCATTTGTTGACAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027237.12 |
||
| 3UTR GCA 72 bp | GTATTCTTGCTGCTTGTCAACAAATGGGTGCCCTTATaGCCCACACTCTGCTTCATAATTGCTGCCTCTCTA | + |
|
Preference number: 3 (lower is better) Translates to: VFLLLVNKWVPL*PTLCFIIAASL Trigger: TAGAGAGGCAGCAATTATGAAGCAGAGTGTGGGGCATAAGGGCACCCATTTGTTGACAAGCAGCAAGAATAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027237.12 |
||
| 3UTR-3UTR CAA 90 bp | GGAAAGGGTTTATTCAGTCTTACAATTCTCAGGTCCATTGTCCAGGGAGTACAAGGGAGCTCAGTTATCTaGGAACAAGATAAACCTGGC | + |
|
Preference number: 3 (lower is better) Translates to: GKGLFSLTILRSIVQGVQGSSVI*EQDKPG Trigger: GCCAGGTTTATCTTGTTCCAAGATAACTGAGCTCCC...TTGTACTCCCTGGACAATGGACCTGAGAATTGTAAGACTGAATAAACCCTTTCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027237.12 |
||
| 3UTR GCA 72 bp | ATTGGACTAATGATCTGGGACAAATTAGTCTCTACTTaGAGAGACTCGGGTAAGGTCTCTAGCCAAGGAAAC | + |
|
Preference number: 3 (lower is better) Translates to: IGLMIWDKLVST*RDSGKVSSQGN Trigger: GTTTCCTTGGCTAGAGACCTTACCCGAGTCTCTGCAAGTAGAGACTAATTTGTCCCAGATCATTAGTCCAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027237.12 |
||
| 3UTR GCA 72 bp | AAAACGTGGCTTTGCTTTCATTCTGCTGAGCCTAGCTaGTCAGCCAAAGTCTTGCAAACACAGGAATTTTGT | + |
|
Preference number: 3 (lower is better) Translates to: KTWLCFHSAEPS*SAKVLQTQEFC Trigger: ACAAAATTCCTGTGTTTGCAAGACTTTGGCTGAGCAGCTAGGCTCAGCAGAATGAAAGCAAAGCCACGTTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027237.12 |
||
| 3UTR GCA 72 bp | TCCATAAGGAAAGGTCTGCAGTGTGTCCTAGAAGGGTaGCATCCATACTCAAATGGTGATGCTTTCTTATAC | + |
|
Preference number: 3 (lower is better) Translates to: SIRKGLQCVLEG*HPYSNGDAFLY Trigger: GTATAAGAAAGCATCACCATTTGAGTATGGATGGCACCCTTCTAGGACACACTGCAGACCTTTCCTTATGGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027237.12 |
||
| 3UTR CCA 72 bp | CTGGTTAGTGCCAAAGCCAAAGTGGTTTTTATGATGTaGTTCTTCTGCGAAGGAGGATCAGAAGAGCAATTC | + |
|
Preference number: 3 (lower is better) Translates to: LVSAKAKVVFMM*FFCEGGSEEQF Trigger: GAATTGCTCTTCTGATCCTCCTTCGCAGAAGAACCACATCATAAAAACCACTTTGGCTTTGGCACTAACCAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027237.12 |
||
| 3UTR GCA 72 bp | TTCTGCCAACAACAGATACCATGCATGTTGTTCACCTaGAGGTCTAGAAACATATACCTAGTTCATGCCTTC | + |
|
Preference number: 3 (lower is better) Translates to: FCQQQIPCMLFT*RSRNIYLVHAF Trigger: GAAGGCATGAACTAGGTATATGTTTCTAGACCTGCAGGTGAACAACATGCATGGTATCTGTTGTTGGCAGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027237.12 |
||
| 3UTR CCA 72 bp | GGAACTGAAGCAGAGCCATGGAAAAGTGCTGCTTACTaGTTTCCTATTTATGGCTTATTTACCCTGCTTACT | + |
|
Preference number: 3 (lower is better) Translates to: GTEAEPWKSAAY*FPIYGLFTLLT Trigger: AGTAAGCAGGGTAAATAAGCCATAAATAGGAAACCAGTAAGCAGCACTTTTCCATGGCTCTGCTTCAGTTCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027237.12 |
||
| 3UTR GCA 72 bp | GTGAGTCGTGATATTTTCTGCCAACAACAGATACCATaGATGTTGTTCACCTGCAGGTCTAGAAACATATAC | + |
|
Preference number: 3 (lower is better) Translates to: VSRDIFCQQQIP*MLFTCRSRNIY Trigger: GTATATGTTTCTAGACCTGCAGGTGAACAACATGCATGGTATCTGTTGTTGGCAGAAAATATCACGACTCAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027237.12 |
||
| 3UTR CCA 72 bp | CCACAAAAACTTCCTCCAGGGATAATTTATGCTCTTTaGTTCCTCTTTAGCTTTGAGATTTCCAGCCAGGAT | + |
|
Preference number: 3 (lower is better) Translates to: PQKLPPGIIYAL*FLFSFEISSQD Trigger: ATCCTGGCTGGAAATCTCAAAGCTAAAGAGGAACCAAAGAGCATAAATTATCCCTGGAGGAAGTTTTTGTGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027237.12 |
||
| 3UTR-3UTR CAA 90 bp | AAAGGGTTTATTCAGTCTTACAATTCTCAGGTCCATTGTCCAGGGAGTACAAGCCTTAAACACATCATCTaGTTACTAAGGAAGACTTCC | + |
|
Preference number: 3 (lower is better) Translates to: KGFIQSYNSQVHCPGSTSLKHII*LLRKTS Trigger: GGAAGTCTTCCTTAGTAACAAGATGATGTGTTTAAG...GCTTGTACTCCCTGGACAATGGACCTGAGAATTGTAAGACTGAATAAACCCTTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027237.12 |
||
| 3UTR-3UTR CAA 90 bp | GTCATCTCACTGGACCTAGCTATGGAAAAGAAGACATTCTATAAACATGGACTGTTTCTGCTTTCATATTaGTACAAGTCTGAGGCACTG | + |
|
Preference number: 3 (lower is better) Translates to: VISLDLAMEKKTFYKHGLFLLSY*YKSEAL Trigger: CAGTGCCTCAGACTTGTACAAATATGAAAGCAGAAA...CAGTCCATGTTTATAGAATGTCTTCTTTTCCATAGCTAGGTCCAGTGAGATGAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027237.12 |
||
| 3UTR GCA 72 bp | GATAAATTCATATATATAGTGCAAAACAGGCATGCGTaGATGAATGTTGGACAGCCCATGGAGCTATTTCTG | + |
|
Preference number: 3 (lower is better) Translates to: DKFIYIVQNRHA*MNVGQPMELFL Trigger: CAGAAATAGCTCCATGGGCTGTCCAACATTCATGCACGCATGCCTGTTTTGCACTATATATATGAATTTATC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027237.12 |
||
| 3UTR GCA 72 bp | AGCTCACTAAATTCATTTGTGAGTCGTGATATTTTCTaGCAACAACAGATACCATGCATGTTGTTCACCTGC | + |
|
Preference number: 3 (lower is better) Translates to: SSLNSFVSRDIF*QQQIPCMLFTC Trigger: GCAGGTGAACAACATGCATGGTATCTGTTGTTGGCAGAAAATATCACGACTCACAAATGAATTTAGTGAGCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027237.12 |
||
| 3UTR GCA 72 bp | CATATTTGTACAAGTCTGAGGCACTGTAAAGCCAAATaGTTGGGAGCTCAGTTATCTTGGAACAAGATAAAC | + |
|
Preference number: 3 (lower is better) Translates to: HICTSLRHCKAK*LGAQLSWNKIN Trigger: GTTTATCTTGTTCCAAGATAACTGAGCTCCCAAGCATTTGGCTTTACAGTGCCTCAGACTTGTACAAATATG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027237.12 |
||
| 3UTR CCA 72 bp | AAGAGGAGGGCTCTGTCCTCTCTGTTATATACAATTTaGAAGAACTTGACTCAAATTTTTGACCCTCTGAGT | + |
|
Preference number: 3 (lower is better) Translates to: KRRALSSLLYTI*KNLTQIFDPLS Trigger: ACTCAGAGGGTCAAAAATTTGAGTCAAGTTCTTCCAAATTGTATATAACAGAGAGGACAGAGCCCTCCTCTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027237.12 |
||
| 3UTR CCA 72 bp | ACAAACCCATTCTTTGTCTTAATTGGACTAATGATCTaGGACAAATTAGTCTCTACTTGCAGAGACTCGGGT | + |
|
Preference number: 3 (lower is better) Translates to: TNPFFVLIGLMI*DKLVSTCRDSG Trigger: ACCCGAGTCTCTGCAAGTAGAGACTAATTTGTCCCAGATCATTAGTCCAATTAAGACAAAGAATGGGTTTGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027237.12 |
||
| 3UTR TCA 72 bp | ACACAGGATGAGCTCACTAAATTCATTTGTGAGTCGTaGTATTTTCTGCCAACAACAGATACCATGCATGTT | + |
|
Preference number: 3 (lower is better) Translates to: TQDELTKFICES*YFLPTTDTMHV Trigger: AACATGCATGGTATCTGTTGTTGGCAGAAAATATCACGACTCACAAATGAATTTAGTGAGCTCATCCTGTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027237.12 |
||
| 3UTR-3UTR CAA 90 bp | GAGGGCTCTGTCCTCTCTGTTATATACAATTTGGAAGAACTTGACTCAAATTTTATGGAGCTATTTCTGTaGATTCTGTTCAGGCTACTT | + |
|
Preference number: 3 (lower is better) Translates to: EGSVLSVIYNLEELDSNFMELFL*ILFRLL Trigger: AAGTAGCCTGAACAGAATCAACAGAAATAGCTCCAT...AAAATTTGAGTCAAGTTCTTCCAAATTGTATATAACAGAGAGGACAGAGCCCTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027237.12 |
||
| 3UTR CCA 72 bp | GTTGTAGACAACTACAAACCCATTCTTTGTCTTAATTaGACTAATGATCTGGGACAAATTAGTCTCTACTTG | + |
|
Preference number: 3 (lower is better) Translates to: VVDNYKPILCLN*TNDLGQISLYL Trigger: CAAGTAGAGACTAATTTGTCCCAGATCATTAGTCCAATTAAGACAAAGAATGGGTTTGTAGTTGTCTACAAC 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027237.12 |
||
| CDS-3UTR CCA 90 bp | AACCCAGACCCTAAAACCACAGATGCCGCTTCATTCCACTGCCTGTCAAGCTTGCAACAGGCCATATCCTaGGGGCTCCTAATTCTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: NPDPKTTDAASFHCLSSLQQAIS*GLLILG Trigger: ACCCAGAATTAGGAGCCCCCAGGATATGGCCTGTTG...CAAGCTTGACAGGCAGTGGAATGAAGCGGCATCTGTGGTTTTAGGGTCTGGGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027237.12 |
||
| CDS-3UTR TCA 90 bp | ACTCTCACCCAGCCCCTTAGACACAAGGGGAATGACCACCATTCTATATTGGACCATCACTTTGGCAGCTaGGACTGGGACAATGAATGG | + |
|
Preference number: 4 (lower is better) Translates to: TLTQPLRHKGNDHHSILDHHFGS*DWDNEW Trigger: CCATTCATTGTCCCAGTCTCAGCTGCCAAAGTGATG...GTCCAATATAGAATGGTGGTCATTCCCCTTGTGTCTAAGGGGCTGGGTGAGAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027237.12 |
||
| CDS-3UTR GCA 90 bp | AGGCATGCGTGCATGAATGTTGGACAGCCCATGGAGCTATTTCTGTTGATTCTGCCTTCTGACTGCCACTaGAAGGTTTGTGAGCAGGAC | + |
|
Preference number: 4 (lower is better) Translates to: RHACMNVGQPMELFLLILPSDCH*KVCEQD Trigger: GTCCTGCTCACAAACCTTGCAGTGGCAGTCAGAAGG...CAGAATCAACAGAAATAGCTCCATGGGCTGTCCAACATTCATGCACGCATGCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027237.12 |
||
| 3UTR CAA 72 bp | CAGATGCCGCTTCATTCCACTGCCTGTCAAGCTTGCTaGGCACTGAGAGCAGAAAGGCTCAATTTCTATCAG | + |
|
Preference number: 4 (lower is better) Translates to: QMPLHSTACQAC*ALRAERLNFYQ Trigger: CTGATAGAAATTGAGCCTTTCTGCTCTCAGTGCCAAGCAAGCTTGACAGGCAGTGGAATGAAGCGGCATCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027237.12 |
||
| 3UTR CAA 72 bp | ACCACAGATGCCGCTTCATTCCACTGCCTGTCAAGCTaGCTTGGCACTGAGAGCAGAAAGGCTCAATTTCTA | + |
|
Preference number: 4 (lower is better) Translates to: TTDAASFHCLSS*LGTESRKAQFL Trigger: TAGAAATTGAGCCTTTCTGCTCTCAGTGCCAAGCAAGCTTGACAGGCAGTGGAATGAAGCGGCATCTGTGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027237.12 |
||
| CDS-3UTR TCA 90 bp | CCATTCCTAAATCTGAATCCTGTAAAGAGTGTTCCAGCCAAGAGGAGGGCTCTGGGGGAGAGTTTCTACTaGTCTCCTCTAGTGGACTTC | + |
|
Preference number: 4 (lower is better) Translates to: PFLNLNPVKSVPAKRRALGESFY*SPLVDF Trigger: GAAGTCCACTAGAGGAGATCAGTAGAAACTCTCCCC...CAGAGCCCTCCTCTTGGCTGGAACACTCTTTACAGGATTCAGATTTAGGAATGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027237.12 |
||
| CDS-3UTR GCA 90 bp | AACTGTCTGGGAGACCATATAGGGTCCATAAGGAAAGGTCTGCAGTGTGTCCTAGCTCACAATGTCATCTaGATACACTCCTCCTGGGGT | + |
|
Preference number: 4 (lower is better) Translates to: NCLGDHIGSIRKGLQCVLAHNVI*IHSSWG Trigger: ACCCCAGGAGGAGTGTATGCAGATGACATTGTGAGC...TAGGACACACTGCAGACCTTTCCTTATGGACCCTATATGGTCTCCCAGACAGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027237.12 |
||
| CDS-3UTR TCA 90 bp | TCATTCCACTGCCTGTCAAGCTTGCTTGGCACTGAGAGCAGAAAGGCTCAATTTCCCGCAGAGCCTTTTTaGCAAGGTAAGGAAGAGATT | + |
|
Preference number: 4 (lower is better) Translates to: SFHCLSSLLGTESRKAQFPAEPF*QGKEEI Trigger: AATCTCTTCCTTACCTTGTCAAAAAGGCTCTGCGGG...AAATTGAGCCTTTCTGCTCTCAGTGCCAAGCAAGCTTGACAGGCAGTGGAATGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027237.12 |
||
| CDS-3UTR GCA 90 bp | CCACAAAAACTTCCTCCAGGGATAATTTATGCTCTTTGGTTCCTCTTTAGCTTTGTAGAGGAAAGCAGCTaGCACCAGAACGCCCACCAG | + |
|
Preference number: 4 (lower is better) Translates to: PQKLPPGIIYALWFLFSFVEESS*HQNAHQ Trigger: CTGGTGGGCGTTCTGGTGGCAGCTGCTTTCCTCTAC...AAAGCTAAAGAGGAACCAAAGAGCATAAATTATCCCTGGAGGAAGTTTTTGTGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027237.12 |
||
| CDS-3UTR CCA 90 bp | TCATTCCACTGCCTGTCAAGCTTGCTTGGCACTGAGAGCAGAAAGGCTCAATTTCTGCTGAGATCTCTCTaGGTAACTTCTCTCAAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: SFHCLSSLLGTESRKAQFLLRSL*VTSLKK Trigger: CTTCTTGAGAGAAGTTACCCAGAGAGATCTCAGCAG...AAATTGAGCCTTTCTGCTCTCAGTGCCAAGCAAGCTTGACAGGCAGTGGAATGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027237.12 |
||
| 3UTR CAA 72 bp | CATGCAAAGCTATGGCATCTGTTGTATTCTTGCTGCTaGTCAACAAATGGGTGCCCTTATGCCCCACACTCT | + |
|
Preference number: 4 (lower is better) Translates to: HAKLWHLLYSCC*STNGCPYAPHS Trigger: AGAGTGTGGGGCATAAGGGCACCCATTTGTTGACAAGCAGCAAGAATACAACAGATGCCATAGCTTTGCATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027237.12 |
||
| CDS-3UTR TCA 90 bp | AGGCATGCGTGCATGAATGTTGGACAGCCCATGGAGCTATTTCTGTTGATTCTGTGTGTTGGTGACAGTTaGCTTGCATGGGAGAATTTT | + |
|
Preference number: 4 (lower is better) Translates to: RHACMNVGQPMELFLLILCVGDS*LAWENF Trigger: AAAATTCTCCCATGCAAGTCAACTGTCACCAACACA...CAGAATCAACAGAAATAGCTCCATGGGCTGTCCAACATTCATGCACGCATGCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027237.12 |
||
| CDS-3UTR TCA 90 bp | GGAAAGGGTTTATTCAGTCTTACAATTCTCAGGTCCATTGTCCAGGGAGTACAATCAGATAGGTCCTTCTaGCTGCCACTGCAAGGTTTG | + |
|
Preference number: 4 (lower is better) Translates to: GKGLFSLTILRSIVQGVQSDRSF*LPLQGL Trigger: CAAACCTTGCAGTGGCAGTCAGAAGGACCTATCTGA...TTGTACTCCCTGGACAATGGACCTGAGAATTGTAAGACTGAATAAACCCTTTCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027237.12 |
||
| CDS-3UTR TCA 90 bp | AACGACGACCCAGCCCTTAAACACATCATCTTGTTACTAAGGAAGACTTCCCCTCAGGACACGTTTCTCTaGGGCTTAACTTCTAAGACT | + |
|
Preference number: 4 (lower is better) Translates to: NDDPALKHIILLLRKTSPQDTFL*GLTSKT Trigger: AGTCTTAGAAGTTAAGCCTCAGAGAAACGTGTCCTG...AGGGGAAGTCTTCCTTAGTAACAAGATGATGTGTTTAAGGGCTGGGTCGTCGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027237.12 |
||
| CDS-3UTR TCA 90 bp | CAAGTGGGTCCTGTAGGGACCCAGGAGATCATATGTTCTGTCTCACCTTCTATATTTCTCCTCAAATACTaGCATTTCCCACTCCTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: QVGPVGTQEIICSVSPSIFLLKY*HFPLLC Trigger: ACACAGGAGTGGGAAATGTCAGTATTTGAGGAGAAA...TATAGAAGGTGAGACAGAACATATGATCTCCTGGGTCCCTACAGGACCCACTTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027237.12 |
||
| CDS-3UTR CCA 90 bp | TTCACCTGCAGGTCTAGAAACATATACCTAGTTCATGCCTTCAAGTGGGTCCTGGTGTTGTGTTCCCAATaGAGTTCTGGGCAAAGCAAA | + |
|
Preference number: 4 (lower is better) Translates to: FTCRSRNIYLVHAFKWVLVLCSQ*SSGQSK Trigger: TTTGCTTTGCCCAGAACTCCATTGGGAACACAACAC...CAGGACCCACTTGAAGGCATGAACTAGGTATATGTTTCTAGACCTGCAGGTGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027237.12 |
||
| 3UTR CAA 72 bp | CACATTGATCATGAATCAAGACAATGTACCACAGGCTaGTCCATAGTCCAATCTAGTGGGGGCTCTCTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: HIDHESRQCTTG*SIVQSSGGSLS Trigger: AGAGAGAGAGCCCCCACTAGATTGGACTATGGACAAGCCTGTGGTACATTGTCTTGATTCATGATCAATGTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027237.12 |
||
| CDS-3UTR GCA 90 bp | AAATGGGTGCCCTTATGCCCCACACTCTGCTTCATAATTGCTGCCTCTCTAGGTATTGGATTTTTCTTGTaGTCAGGAAGTAGTCTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: KWVPLCPTLCFIIAASLGIGFFL*SGSSLP Trigger: TGGAAGACTACTTCCTGAGCACAAGAAAAATCCAAT...ACCTAGAGAGGCAGCAATTATGAAGCAGAGTGTGGGGCATAAGGGCACCCATTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027237.12 |
||
| CDS-3UTR CCA 90 bp | TTCACCTGCAGGTCTAGAAACATATACCTAGTTCATGCCTTCAAGTGGGTCCTGGGCTTTGAAAGTCTTTaGAAGCCAAACTGTACTCTG | + |
|
Preference number: 4 (lower is better) Translates to: FTCRSRNIYLVHAFKWVLGFESL*KPNCTL Trigger: CAGAGTACAGTTTGGCTTCCAAAGACTTTCAAAGCC...CAGGACCCACTTGAAGGCATGAACTAGGTATATGTTTCTAGACCTGCAGGTGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027237.12 |
||
| CDS-3UTR TCA 90 bp | ATTTTCTGCCAACAACAGATACCATGCATGTTGTTCACCTGCAGGTCTAGAAACGTGGCACAAGCTGAATaGTTAAATCCTGTGGTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: IFCQQQIPCMLFTCRSRNVAQAE*LNPVVF Trigger: GAAGACCACAGGATTTAATCATTCAGCTTGTGCCAC...GTTTCTAGACCTGCAGGTGAACAACATGCATGGTATCTGTTGTTGGCAGAAAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027237.12 |
||
| CDS-3UTR CCA 90 bp | GTCATCTCACTGGACCTAGCTATGGAAAAGAAGACATTCTATAAACATGGACTGGGTTGCATGTACCACTaGACATCAGATAGGTCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: VISLDLAMEKKTFYKHGLGCMYH*TSDRSF Trigger: GAAGGACCTATCTGATGTCCAGTGGTACATGCAACC...CAGTCCATGTTTATAGAATGTCTTCTTTTCCATAGCTAGGTCCAGTGAGATGAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027237.12 |
||
| CDS-3UTR CCA 90 bp | TTCACCTGCAGGTCTAGAAACATATACCTAGTTCATGCCTTCAAGTGGGTCCTGATCTGCCATCTCAATTaGATTTTTCTTGTGCTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: FTCRSRNIYLVHAFKWVLICHLN*IFLVLR Trigger: CCTGAGCACAAGAAAAATCCAATTGAGATGGCAGAT...CAGGACCCACTTGAAGGCATGAACTAGGTATATGTTTCTAGACCTGCAGGTGAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027237.12 |
||
| CDS-3UTR TCA 90 bp | GAGGGCTCTGTCCTCTCTGTTATATACAATTTGGAAGAACTTGACTCAAATTTTCCACTGCAAGGTTTGTaGGCAGGACTTTGTGTTGGT | + |
|
Preference number: 4 (lower is better) Translates to: EGSVLSVIYNLEELDSNFPLQGL*AGLCVG Trigger: ACCAACACAAAGTCCTGCTCACAAACCTTGCAGTGG...AAAATTTGAGTCAAGTTCTTCCAAATTGTATATAACAGAGAGGACAGAGCCCTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027237.12 |
||
| CDS-3UTR TCA 90 bp | ATACCATGCATGTTGTTCACCTGCAGGTCTAGAAACATATACCTAGTTCATGCCATCAACTTCAGTGTCTaGTCAACCAAGGCAAGATTC | + |
|
Preference number: 4 (lower is better) Translates to: IPCMLFTCRSRNIYLVHAINFSV*STKARF Trigger: GAATCTTGCCTTGGTTGATCAGACACTGAAGTTGAT...GGCATGAACTAGGTATATGTTTCTAGACCTGCAGGTGAACAACATGCATGGTAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027237.12 |
||
| CDS-3UTR GCA 90 bp | TCCTCTTTAGCTTTGAGATTTCCAGCCAGGATGCTGGTTAGTGCCAAAGCCAAACGAGTAGGATACAAATaGATCGAATTCCTTCTTATC | + |
|
Preference number: 4 (lower is better) Translates to: SSLALRFPARMLVSAKAKRVGYK*IEFLLI Trigger: GATAAGAAGGAATTCGATGCATTTGTATCCTACTCG...TTTGGCTTTGGCACTAACCAGCATCCTGGCTGGAAATCTCAAAGCTAAAGAGGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027237.12 |
||
| CDS-3UTR CCA 90 bp | ATACCATGCATGTTGTTCACCTGCAGGTCTAGAAACATATACCTAGTTCATGCCGTAAGGAAGAGATTCTaGCTCTTGGAAGGAACAGAA | + |
|
Preference number: 4 (lower is better) Translates to: IPCMLFTCRSRNIYLVHAVRKRF*LLEGTE Trigger: TTCTGTTCCTTCCAAGAGCCAGAATCTCTTCCTTAC...GGCATGAACTAGGTATATGTTTCTAGACCTGCAGGTGAACAACATGCATGGTAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027237.12 |
||
| 3UTR CAA 72 bp | ATTTGTACAAGTCTGAGGCACTGTAAAGCCAAATGCTaGGGAGCTCAGTTATCTTGGAACAAGATAAACCTG | + |
|
Preference number: 4 (lower is better) Translates to: ICTSLRHCKAKC*GAQLSWNKINL Trigger: CAGGTTTATCTTGTTCCAAGATAACTGAGCTCCCAAGCATTTGGCTTTACAGTGCCTCAGACTTGTACAAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027237.12 |
||
| CDS-3UTR TCA 90 bp | ATTTTCTGCCAACAACAGATACCATGCATGTTGTTCACCTGCAGGTCTAGAAACCTTTATCACAGGCTTTaGAAGTCTTTGGAAGCCAAA | + |
|
Preference number: 4 (lower is better) Translates to: IFCQQQIPCMLFTCRSRNLYHRL*KSLEAK Trigger: TTTGGCTTCCAAAGACTTTCAAAGCCTGTGATAAAG...GTTTCTAGACCTGCAGGTGAACAACATGCATGGTATCTGTTGTTGGCAGAAAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027237.12 |
||
| CDS-3UTR CCA 90 bp | CCACAAAAACTTCCTCCAGGGATAATTTATGCTCTTTGGTTCCTCTTTAGCTTTCCTTCACTCTGCATATaGGGAGAGTTTCTACTGATC | + |
|
Preference number: 4 (lower is better) Translates to: PQKLPPGIIYALWFLFSFPSLCI*GEFLLI Trigger: GATCAGTAGAAACTCTCCCCATATGCAGAGTGAAGG...AAAGCTAAAGAGGAACCAAAGAGCATAAATTATCCCTGGAGGAAGTTTTTGTGG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027237.12 |
||
| CDS-3UTR CCA 90 bp | GCAAAATTTCTTTACAGAAGGGCTTTAGATGGAGTTTCAATCACTCGTATCGAACTCTGTACATCACTTTaGCAGCTGAGACTGGGACAA | + |
|
Preference number: 4 (lower is better) Translates to: AKFLYRRALDGVSITRIELCTSL*QLRLGQ Trigger: TTGTCCCAGTCTCAGCTGCCAAAGTGATGTACAGAG...TTCGATACGAGTGATTGAAACTCCATCTAAAGCCCTTCTGTAAAGAAATTTTGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027237.12 |
||
| CDS-3UTR CCA 90 bp | CCATTCTATATTGGACCTTTCGAAGCTTGGACACAGGATGAGCTCACTAAATTCTTCCCAATGGAGTTCTaGGCAAAGCAAACAAACTTT | + |
|
Preference number: 4 (lower is better) Translates to: PFYIGPFEAWTQDELTKFFPMEF*AKQTNF Trigger: AAAGTTTGTTTGCTTTGCCCAGAACTCCATTGGGAA...GAATTTAGTGAGCTCATCCTGTGTCCAAGCTTCGAAAGGTCCAATATAGAATGG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027237.12 |
||
| 3UTR CAA 72 bp | CGTGATATTTTCTGCCAACAACAGATACCATGCATGTaGTTCACCTGCAGGTCTAGAAACATATACCTAGTT | + |
|
Preference number: 4 (lower is better) Translates to: RDIFCQQQIPCM*FTCRSRNIYLV Trigger: AACTAGGTATATGTTTCTAGACCTGCAGGTGAACAACATGCATGGTATCTGTTGTTGGCAGAAAATATCACG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027237.12 |
||
| CDS-3UTR TCA 90 bp | GAGGGCTCTGTCCTCTCTGTTATATACAATTTGGAAGAACTTGACTCAAATTTTGGGTCTACAAATATATaGCCAAATGCTGTTCGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: EGSVLSVIYNLEELDSNFGSTNI*PNAVRL Trigger: CAGACGAACAGCATTTGGTCATATATTTGTAGACCC...AAAATTTGAGTCAAGTTCTTCCAAATTGTATATAACAGAGAGGACAGAGCCCTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027237.12 |
||
| 3UTR CAA 72 bp | TTAGTTGATATGCAAGGCATAAATATTAATAACAGTTaGTCCCAAATGCATACCTGTCATCTCACTGGACCT | + |
|
Preference number: 4 (lower is better) Translates to: LVDMQGININNS*SQMHTCHLTGP Trigger: AGGTCCAGTGAGATGACAGGTATGCATTTGGGACAAACTGTTATTAATATTTATGCCTTGCATATCAACTAA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027237.12 |
||
| CDS GCA 90 bp | ACAGAGCAGGACAACTTCAATCCAGTACCAGTAGAGGAAAGCAGCTaGCACCAGAACGCCCACCAGCATCAAGGCCGTGCCGAGAAGGAT | + |
|
Preference number: 5 (lower is better) Translates to: TEQDNFNPVPVEESS*HQNAHQHQGRAEKD Trigger: ATCCTTCTCGGCACGGCCTTGATGCTGGTGGGCGTTCTGGTGGCAGCTGCTTTCCTCTACTGGTACTGGATTGAAGTTGTCCTGCTCTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027237.12 |
||
| CDS GCA 90 bp | AGAGGAAAGCAGCTGCCACCAGAACGCCCACCAGCATCAAGGCCGTaGCGAGAAGGATGTATACAAACACCACCTCTTCCTTCTTCCTCA | + |
|
Preference number: 5 (lower is better) Translates to: RGKQLPPERPPASRP*REGCIQTPPLPSSS Trigger: TGAGGAAGAAGGAAGAGGTGGTGTTTGTATACATCCTTCTCGGCACGGCCTTGATGCTGGTGGGCGTTCTGGTGGCAGCTGCTTTCCTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027237.12 |
||
| CDS-3UTR CAA 90 bp | GGCTTATTTACCCTGCTTACTCATAGCATCCAGGGCCACCAGCCCAGGGGTGACAATTCTCTGCACCCCTaGCAGAATATGTCCACAGAA | + |
|
Preference number: 5 (lower is better) Translates to: GLFTLLTHSIQGHQPRGDNSLHP*QNMSTE Trigger: TTCTGTGGACATATTCTGCAAGGGGTGCAGAGAATT...GTCACCCCTGGGCTGGTGGCCCTGGATGCTATGAGTAAGCAGGGTAAATAAGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027237.12 |
||
| CDS-3UTR CAA 90 bp | AACCCAGACCCTAAAACCACAGATGCCGCTTCATTCCACTGCCTGTCAAGCTTGACTCTGTACATCACTTaGGCAGCTGAGACTGGGACA | + |
|
Preference number: 5 (lower is better) Translates to: NPDPKTTDAASFHCLSSLTLYIT*AAETGT Trigger: TGTCCCAGTCTCAGCTGCCAAAGTGATGTACAGAGT...CAAGCTTGACAGGCAGTGGAATGAAGCGGCATCTGTGGTTTTAGGGTCTGGGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027237.12 |
||
| CDS GCA 90 bp | TCCGAGGTTGCATGTACCACTGGACATCAGATAGGTCCTTCTGACTaGCACTGCAAGGTTTGTGAGCAGGACTTTGTGTTGGTGACAGTT | + |
|
Preference number: 5 (lower is better) Translates to: SEVACTTGHQIGPSD*HCKVCEQDFVLVTV Trigger: AACTGTCACCAACACAAAGTCCTGCTCACAAACCTTGCAGTGGCAGTCAGAAGGACCTATCTGATGTCCAGTGGTACATGCAACCTCGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027237.12 |
||
| CDS TCA 90 bp | ATATATGCAGCATGCCTTCACTCTGCATATGGGGAGAGTTTCTACTaGTCTCCTCTAGTGGACTTCCACTCCGAGGTTGCATGTACCACT | + |
|
Preference number: 5 (lower is better) Translates to: IYAACLHSAYGESFY*SPLVDFHSEVACTT Trigger: AGTGGTACATGCAACCTCGGAGTGGAAGTCCACTAGAGGAGATCAGTAGAAACTCTCCCCATATGCAGAGTGAAGGCATGCTGCATATAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027237.12 |
||
| CDS CCA 90 bp | TTCTTCCTCAGCCGTATGGTCCGTGTTGTGTTCCCAATGGAGTTCTaGGCAAAGCAAACAAACTTTCTGCTGAGATCTCTCTGGGTAACT | + |
|
Preference number: 5 (lower is better) Translates to: FFLSRMVRVVFPMEF*AKQTNFLLRSLWVT Trigger: AGTTACCCAGAGAGATCTCAGCAGAAAGTTTGTTTGCTTTGCCCAGAACTCCATTGGGAACACAACACGGACCATACGGCTGAGGAAGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027237.12 |
||
| CDS-3UTR CAA 90 bp | GCCTTCACTGCTCACATGATGAGCCACCCTGTTCCATCAGGAAAGGTGGTGTTCACTTTATCACAGGCTTaGAAAGTCTTTGGAAGCCAA | + |
|
Preference number: 5 (lower is better) Translates to: AFTAHMMSHPVPSGKVVFTLSQA*KVFGSQ Trigger: TTGGCTTCCAAAGACTTTCAAAGCCTGTGATAAAGT...GAACACCACCTTTCCTGATGGAACAGGGTGGCTCATCATGTGAGCAGTGAAGGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027237.12 |
||
| CDS TCA 90 bp | ATCTCTGGACTCTGTACATCACTTTGGCAGCTGAGACTGGGACAATaGATGGAGCCAGTACTGCCAAGAAGTAGGACTTGTTCATCTTGT | + |
|
Preference number: 5 (lower is better) Translates to: ISGLCTSLWQLRLGQ*MEPVLPRSRTCSSC Trigger: ACAAGATGAACAAGTCCTACTTCTTGGCAGTACTGGCTCCATTCATTGTCCCAGTCTCAGCTGCCAAAGTGATGTACAGAGTCCAGAGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027237.12 |
||
| CDS GCA 90 bp | CACGGCGTCAGTCTCAGGAGAGCTCCAATTCGAGTAGGATACAAATaGATCGAATTCCTTCTTATCCCCCAGAGTCTCATCTTTGTTCTT | + |
|
Preference number: 5 (lower is better) Translates to: HGVSLRRAPIRVGYK*IEFLLIPQSLIFVL Trigger: AAGAACAAAGATGAGACTCTGGGGGATAAGAAGGAATTCGATGCATTTGTATCCTACTCGAATTGGAGCTCTCCTGAGACTGACGCCGTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027237.12 |
||
| CDS-3UTR CAA 90 bp | ATCTTGGAACAAGATAAACCTGGCTGCACTGGCCAGAAGAGGTTTCTGAGTCTAAGTAGTCTTCCATCCTaGTACCAGGTCATCTCTGGA | + |
|
Preference number: 5 (lower is better) Translates to: ILEQDKPGCTGQKRFLSLSSLPS*YQVISG Trigger: TCCAGAGATGACCTGGTACAAGGATGGAAGACTACT...TAGACTCAGAAACCTCTTCTGGCCAGTGCAGCCAGGTTTATCTTGTTCCAAGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027237.12 |
||
| CDS TCA 90 bp | AGGACTTGTTCATCTTGTGCTGTGTTCCCACAGGACACGTTTCTCTaGGGCTTAACTTCTAAGACTGTCTTGATACAACAGGCCATATCC | + |
|
Preference number: 5 (lower is better) Translates to: RTCSSCAVFPQDTFL*GLTSKTVLIQQAIS Trigger: GGATATGGCCTGTTGTATCAAGACAGTCTTAGAAGTTAAGCCTCAGAGAAACGTGTCCTGTGGGAACACAGCACAAGATGAACAAGTCCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027237.12 |
||
| CDS GCA 90 bp | CTACAAATATATGACCAAATGCTGTTCGTCTGTGGGGCCAATATATaGAGCATGCCTTCACTCTGCATATGGGGAGAGTTTCTACTGATC | + |
|
Preference number: 5 (lower is better) Translates to: LQIYDQMLFVCGANI*SMPSLCIWGEFLLI Trigger: GATCAGTAGAAACTCTCCCCATATGCAGAGTGAAGGCATGCTGCATATATTGGCCCCACAGACGAACAGCATTTGGTCATATATTTGTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027237.12 |
||
| CDS-3UTR CAA 90 bp | TGTCAAGCTTGCTTGGCACTGAGAGCAGAAAGGCTCAATTTCTATCAGCCTGATTTGGTGACAGTTGACTaGCATGGGAGAATTTTTGCT | + |
|
Preference number: 5 (lower is better) Translates to: CQACLALRAERLNFYQPDLVTVD*HGRIFA Trigger: AGCAAAAATTCTCCCATGCAAGTCAACTGTCACCAA...ATCAGGCTGATAGAAATTGAGCCTTTCTGCTCTCAGTGCCAAGCAAGCTTGACA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027237.12 |
||
| CDS-3UTR CAA 90 bp | ATTTTCTGCCAACAACAGATACCATGCATGTTGTTCACCTGCAGGTCTAGAAACGAGCAGGACTTTGTGTaGGTGACAGTTGACTTGCAT | + |
|
Preference number: 5 (lower is better) Translates to: IFCQQQIPCMLFTCRSRNEQDFV*VTVDLH Trigger: ATGCAAGTCAACTGTCACCAACACAAAGTCCTGCTC...GTTTCTAGACCTGCAGGTGAACAACATGCATGGTATCTGTTGTTGGCAGAAAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027237.12 |
||
| CDS-3UTR CAA 90 bp | CAAGTGGGTCCTGTAGGGACCCAGGAGATCATATGTTCTGTCTCACCTTCTATATATCTGCCATCTCAATaGGATTTTTCTTGTGCTCAG | + |
|
Preference number: 5 (lower is better) Translates to: QVGPVGTQEIICSVSPSIYLPSQ*DFSCAQ Trigger: CTGAGCACAAGAAAAATCCAATTGAGATGGCAGATA...TATAGAAGGTGAGACAGAACATATGATCTCCTGGGTCCCTACAGGACCCACTTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027237.12 |
||
| CDS-3UTR CAA 90 bp | ACTCTCACCCAGCCCCTTAGACACAAGGGGAATGACCACCATTCTATATTGGACTCCTGTGTAGATTCTTaGACATACCACTTTATCACA | + |
|
Preference number: 5 (lower is better) Translates to: TLTQPLRHKGNDHHSILDSCVDS*TYHFIT Trigger: TGTGATAAAGTGGTATGTCAAAGAATCTACACAGGA...GTCCAATATAGAATGGTGGTCATTCCCCTTGTGTCTAAGGGGCTGGGTGAGAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027237.12 |
||
| CDS CCA 90 bp | GTAGATTCTTTGACATACCACTTTATCACAGGCTTTGAAAGTCTTTaGAAGCCAAACTGTACTCTGCAGGGGAGAGTTAAAGGCTTTCCA | + |
|
Preference number: 5 (lower is better) Translates to: VDSLTYHFITGFESL*KPNCTLQGRVKGFP Trigger: TGGAAAGCCTTTAACTCTCCCCTGCAGAGTACAGTTTGGCTTCCAAAGACTTTCAAAGCCTGTGATAAAGTGGTATGTCAAAGAATCTAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027237.12 |
||
| CDS CCA 90 bp | ATGGAGTTCTGGGCAAAGCAAACAAACTTTCTGCTGAGATCTCTCTaGGTAACTTCTCTCAAGAAGATGGTACGTTCAATGACTTCATTC | + |
|
Preference number: 5 (lower is better) Translates to: MEFWAKQTNFLLRSL*VTSLKKMVRSMTSF Trigger: GAATGAAGTCATTGAACGTACCATCTTCTTGAGAGAAGTTACCCAGAGAGATCTCAGCAGAAAGTTTGTTTGCTTTGCCCAGAACTCCAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027237.12 |
||
| CDS TCA 90 bp | GGCTCTTGGAAGGAACAGAACTTAATTAAAATCAACTTCAGTGTCTaGTCAACCAAGGCAAGATTCACTGCTGCTTGTAGCTCAAAGACA | + |
|
Preference number: 5 (lower is better) Translates to: GSWKEQNLIKINFSV*STKARFTAACSSKT Trigger: TGTCTTTGAGCTACAAGCAGCAGTGAATCTTGCCTTGGTTGATCAGACACTGAAGTTGATTTTAATTAAGTTCTGTTCCTTCCAAGAGCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027237.12 |
||
| CDS-3UTR CAA 90 bp | ATACCATGCATGTTGTTCACCTGCAGGTCTAGAAACATATACCTAGTTCATGCCAAGAGATTCTGGCTCTaGGAAGGAACAGAACTTAAT | + |
|
Preference number: 5 (lower is better) Translates to: IPCMLFTCRSRNIYLVHAKRFWL*EGTELN Trigger: ATTAAGTTCTGTTCCTTCCAAGAGCCAGAATCTCTT...GGCATGAACTAGGTATATGTTTCTAGACCTGCAGGTGAACAACATGCATGGTAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027237.12 |
||
| CDS-3UTR CAA 90 bp | TCAAAGGGCATAAACAGCCACATCAACTCAAACCCTGTTTCAGCTATAGACCAATCAATTGGATTTTTCTaGTGCTCAGGAAGTAGTCTT | + |
|
Preference number: 5 (lower is better) Translates to: SKGINSHINSNPVSAIDQSIGFF*CSGSSL Trigger: AAGACTACTTCCTGAGCACAAGAAAAATCCAATTGA...TTGGTCTATAGCTGAAACAGGGTTTGAGTTGATGTGGCTGTTTATGCCCTTTGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027237.12 |
||
| CDS GCA 72 bp | GACAACTTCAATCCAGTACCAGTAGAGGAAAGCAGCTaGCACCAGAACGCCCACCAGCATCAAGGCCGTGCC | + |
|
Preference number: 6 (lower is better) Translates to: DNFNPVPVEESS*HQNAHQHQGRA Trigger: GGCACGGCCTTGATGCTGGTGGGCGTTCTGGTGGCAGCTGCTTTCCTCTACTGGTACTGGATTGAAGTTGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027237.12 |
||
| CDS CCA 72 bp | TCACAGGCATGTGGTAACGAATTTGGGTCCAGAACCTaGAACTGGCGTGGACCGACTTCAAGCCTTTCCATG | + |
|
Preference number: 6 (lower is better) Translates to: SQACGNEFGSRT*NWRGPTSSLSM Trigger: CATGGAAAGGCTTGAAGTCGGTCCACGCCAGTTCCAGGTTCTGGACCCAAATTCGTTACCACATGCCTGTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027237.12 |
||
| CDS CAA 72 bp | CCTGTTGGAGTTCTTCACAGGCATGTGGTAACGAATTaGGGTCCAGAACCTGGAACTGGCGTGGACCGACTT | + |
|
Preference number: 6 (lower is better) Translates to: PVGVLHRHVVTN*GPEPGTGVDRL Trigger: AAGTCGGTCCACGCCAGTTCCAGGTTCTGGACCCAAATTCGTTACCACATGCCTGTGAAGAACTCCAACAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027237.12 |
||
| CDS TCA 72 bp | GCATGCCTTCACTCTGCATATGGGGAGAGTTTCTACTaGTCTCCTCTAGTGGACTTCCACTCCGAGGTTGCA | + |
|
Preference number: 6 (lower is better) Translates to: ACLHSAYGESFY*SPLVDFHSEVA Trigger: TGCAACCTCGGAGTGGAAGTCCACTAGAGGAGATCAGTAGAAACTCTCCCCATATGCAGAGTGAAGGCATGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027237.12 |
||
| CDS TCA 72 bp | AGGTCATCTCTGGACTCTGTACATCACTTTGGCAGCTaGGACTGGGACAATGAATGGAGCCAGTACTGCCAA | + |
|
Preference number: 6 (lower is better) Translates to: RSSLDSVHHFGS*DWDNEWSQYCQ Trigger: TTGGCAGTACTGGCTCCATTCATTGTCCCAGTCTCAGCTGCCAAAGTGATGTACAGAGTCCAGAGATGACCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027237.12 |
||
| CDS GCA 72 bp | ACCACTGGACATCAGATAGGTCCTTCTGACTGCCACTaGAAGGTTTGTGAGCAGGACTTTGTGTTGGTGACA | + |
|
Preference number: 6 (lower is better) Translates to: TTGHQIGPSDCH*KVCEQDFVLVT Trigger: TGTCACCAACACAAAGTCCTGCTCACAAACCTTGCAGTGGCAGTCAGAAGGACCTATCTGATGTCCAGTGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027237.12 |
||
| CDS GCA 72 bp | GCATGTACCACTGGACATCAGATAGGTCCTTCTGACTaGCACTGCAAGGTTTGTGAGCAGGACTTTGTGTTG | + |
|
Preference number: 6 (lower is better) Translates to: ACTTGHQIGPSD*HCKVCEQDFVL Trigger: CAACACAAAGTCCTGCTCACAAACCTTGCAGTGGCAGTCAGAAGGACCTATCTGATGTCCAGTGGTACATGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027237.12 |
||
| CDS CAA 90 bp | GAACATAAACCTGTTGGAGTTCTTCACAGGCATGTGGTAACGAATTaGGGTCCAGAACCTGGAACTGGCGTGGACCGACTTCAAGCCTTT | + |
|
Preference number: 6 (lower is better) Translates to: EHKPVGVLHRHVVTN*GPEPGTGVDRLQAF Trigger: AAAGGCTTGAAGTCGGTCCACGCCAGTTCCAGGTTCTGGACCCAAATTCGTTACCACATGCCTGTGAAGAACTCCAACAGGTTTATGTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027237.12 |
||
| CDS TCA 72 bp | GCCACTGCAAGGTTTGTGAGCAGGACTTTGTGTTGGTaGCAGTTGACTTGCATGGGAGAATTTTTGCTCCTG | + |
|
Preference number: 6 (lower is better) Translates to: ATARFVSRTLCW*QLTCMGEFLLL Trigger: CAGGAGCAAAAATTCTCCCATGCAAGTCAACTGTCACCAACACAAAGTCCTGCTCACAAACCTTGCAGTGGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027237.12 |
||
| CDS CCA 72 bp | AGCCGTATGGTCCGTGTTGTGTTCCCAATGGAGTTCTaGGCAAAGCAAACAAACTTTCTGCTGAGATCTCTC | + |
|
Preference number: 6 (lower is better) Translates to: SRMVRVVFPMEF*AKQTNFLLRSL Trigger: GAGAGATCTCAGCAGAAAGTTTGTTTGCTTTGCCCAGAACTCCATTGGGAACACAACACGGACCATACGGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027237.12 |
||
| CDS CAA 90 bp | ATACAAACACCACCTCTTCCTTCTTCCTCAGCCGTATGGTCCGTGTaGTGTTCCCAATGGAGTTCTGGGCAAAGCAAACAAACTTTCTGC | + |
|
Preference number: 6 (lower is better) Translates to: IQTPPLPSSSAVWSV*CSQWSSGQSKQTFC Trigger: GCAGAAAGTTTGTTTGCTTTGCCCAGAACTCCATTGGGAACACAACACGGACCATACGGCTGAGGAAGAAGGAAGAGGTGGTGTTTGTAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027237.12 |
||
| CDS GCA 72 bp | TATGACCAAATGCTGTTCGTCTGTGGGGCCAATATATaGAGCATGCCTTCACTCTGCATATGGGGAGAGTTT | + |
|
Preference number: 6 (lower is better) Translates to: YDQMLFVCGANI*SMPSLCIWGEF Trigger: AAACTCTCCCCATATGCAGAGTGAAGGCATGCTGCATATATTGGCCCCACAGACGAACAGCATTTGGTCATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027237.12 |
||
| CDS GCA 72 bp | CAGGCTTTGAAAGTCTTTGGAAGCCAAACTGTACTCTaGAGGGGAGAGTTAAAGGCTTTCCAAGCTCTACGT | + |
|
Preference number: 6 (lower is better) Translates to: QALKVFGSQTVL*RGELKAFQALR Trigger: ACGTAGAGCTTGGAAAGCCTTTAACTCTCCCCTGCAGAGTACAGTTTGGCTTCCAAAGACTTTCAAAGCCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027237.12 |
||
| CDS GCA 72 bp | TCTTCGGCTTTTCTTAATGATGCTCACAATGTCATCTaGATACACTCCTCCTGGGGTCACATCTCGGTCAAG | + |
|
Preference number: 6 (lower is better) Translates to: SSAFLNDAHNVI*IHSSWGHISVK Trigger: CTTGACCGAGATGTGACCCCAGGAGGAGTGTATGCAGATGACATTGTGAGCATCATTAAGAAAAGCCGAAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027237.12 |
||
| CDS CAA 72 bp | GACTGCCACTGCAAGGTTTGTGAGCAGGACTTTGTGTaGGTGACAGTTGACTTGCATGGGAGAATTTTTGCT | + |
|
Preference number: 6 (lower is better) Translates to: DCHCKVCEQDFV*VTVDLHGRIFA Trigger: AGCAAAAATTCTCCCATGCAAGTCAACTGTCACCAACACAAAGTCCTGCTCACAAACCTTGCAGTGGCAGTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027237.12 |
||
| CDS CAA 90 bp | ACGTCCAGTGTATCTGTAATGGGATCCAGAATTTCCGGCTTCACATaGATGTCCTTACCAATGGTTCTCACTTTAACCACAGCTCGGACT | + |
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Preference number: 6 (lower is better) Translates to: TSSVSVMGSRISGFT*MSLPMVLTLTTART Trigger: AGTCCGAGCTGTGGTTAAAGTGAGAACCATTGGTAAGGACATCAATGTGAAGCCGGAAATTCTGGATCCCATTACAGATACACTGGACGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027237.12 |
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| CDS GCA 72 bp | AGTCTCAGGAGAGCTCCAATTCGAGTAGGATACAAATaGATCGAATTCCTTCTTATCCCCCAGAGTCTCATC | + |
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Preference number: 6 (lower is better) Translates to: SLRRAPIRVGYK*IEFLLIPQSLI Trigger: GATGAGACTCTGGGGGATAAGAAGGAATTCGATGCATTTGTATCCTACTCGAATTGGAGCTCTCCTGAGACT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027237.12 |
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| CDS TCA 72 bp | TCATCTTGTGCTGTGTTCCCACAGGACACGTTTCTCTaGGGCTTAACTTCTAAGACTGTCTTGATACAACAG | + |
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Preference number: 6 (lower is better) Translates to: SSCAVFPQDTFL*GLTSKTVLIQQ Trigger: CTGTTGTATCAAGACAGTCTTAGAAGTTAAGCCTCAGAGAAACGTGTCCTGTGGGAACACAGCACAAGATGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027237.12 |
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| CDS CAA 72 bp | GTTTGTGAGCAGGACTTTGTGTTGGTGACAGTTGACTaGCATGGGAGAATTTTTGCTCCTGAAGCTCTTGTA | + |
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Preference number: 6 (lower is better) Translates to: VCEQDFVLVTVD*HGRIFAPEALV Trigger: TACAAGAGCTTCAGGAGCAAAAATTCTCCCATGCAAGTCAACTGTCACCAACACAAAGTCCTGCTCACAAAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027237.12 |
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| CDS CAA 72 bp | GGATTTTTCTTGTGCTCAGGAAGTAGTCTTCCATCCTaGTACCAGGTCATCTCTGGACTCTGTACATCACTT | + |
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Preference number: 6 (lower is better) Translates to: GFFLCSGSSLPS*YQVISGLCTSL Trigger: AAGTGATGTACAGAGTCCAGAGATGACCTGGTACAAGGATGGAAGACTACTTCCTGAGCACAAGAAAAATCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027237.12 |
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| CDS CCA 72 bp | ACTTCTAAGACTGTCTTGATACAACAGGCCATATCCTaGGGGCTCCTAATTCTGGGTCTACAAATATATGAC | + |
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Preference number: 6 (lower is better) Translates to: TSKTVLIQQAIS*GLLILGLQIYD Trigger: GTCATATATTTGTAGACCCAGAATTAGGAGCCCCCAGGATATGGCCTGTTGTATCAAGACAGTCTTAGAAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027237.12 |
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| CDS CCA 72 bp | TGGGCAAAGCAAACAAACTTTCTGCTGAGATCTCTCTaGGTAACTTCTCTCAAGAAGATGGTACGTTCAATG | + |
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Preference number: 6 (lower is better) Translates to: WAKQTNFLLRSL*VTSLKKMVRSM Trigger: CATTGAACGTACCATCTTCTTGAGAGAAGTTACCCAGAGAGATCTCAGCAGAAAGTTTGTTTGCTTTGCCCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027237.12 |
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| CDS TCA 72 bp | TGTAGATTCTTTGACATACCACTTTATCACAGGCTTTaGAAGTCTTTGGAAGCCAAACTGTACTCTGCAGGG | + |
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Preference number: 6 (lower is better) Translates to: CRFFDIPLYHRL*KSLEAKLYSAG Trigger: CCCTGCAGAGTACAGTTTGGCTTCCAAAGACTTTCAAAGCCTGTGATAAAGTGGTATGTCAAAGAATCTACA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027237.12 |
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| CDS CAA 72 bp | GTATCTGTAATGGGATCCAGAATTTCCGGCTTCACATaGATGTCCTTACCAATGGTTCTCACTTTAACCACA | + |
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Preference number: 6 (lower is better) Translates to: VSVMGSRISGFT*MSLPMVLTLTT Trigger: TGTGGTTAAAGTGAGAACCATTGGTAAGGACATCAATGTGAAGCCGGAAATTCTGGATCCCATTACAGATAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027237.12 |
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| CDS TCA 72 bp | AAGGAACAGAACTTAATTAAAATCAACTTCAGTGTCTaGTCAACCAAGGCAAGATTCACTGCTGCTTGTAGC | + |
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Preference number: 6 (lower is better) Translates to: KEQNLIKINFSV*STKARFTAACS Trigger: GCTACAAGCAGCAGTGAATCTTGCCTTGGTTGATCAGACACTGAAGTTGATTTTAATTAAGTTCTGTTCCTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027237.12 |
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| CDS CAA 72 bp | TCAAATACTGACATTTCCCACTCCTGTGTAGATTCTTaGACATACCACTTTATCACAGGCTTTGAAAGTCTT | + |
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Preference number: 6 (lower is better) Translates to: SNTDISHSCVDS*TYHFITGFESL Trigger: AAGACTTTCAAAGCCTGTGATAAAGTGGTATGTCAAAGAATCTACACAGGAGTGGGAAATGTCAGTATTTGA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027237.12 |
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