Pregenerated sensors for IL18R1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000026070Ensembl transcript IDs: ENSMUST00000087983.8, ENSMUST00000108044.4, ENSMUST00000167723.8, ENSMUST00000193391.6, ENSMUST00000193793.6, ENSMUST00000195684.6
Found 284 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR GCA 90 bp | CTCTTGCACCTCCCAAGCCTGGGAGAGAGCCATGTACCCTTGAGATaGAGTAAAGATTGGCTCATAGAAAATGCCTCGGAGCGCATAAAA | + |
Preference number: 1 (lower is better) Translates to: LLHLPSLGESHVPLR*SKDWLIENASERIK Trigger: TTTTATGCGCTCCGAGGCATTTTCTATGAGCCAATCTTTACTGCATCTCAAGGGTACATGGCTCTCTCCCAGGCTTGGGAGGTGCAAGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108044.4 |
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3UTR GCA 90 bp | TCTGCTCTAGACTTCCCTAGAATATTCTTGCTTCACTCAGGCACTTaGAAGGTCACAAGAAGCTTTGGGCTTCTAGCTCTAGGCCAGCGG | + |
Preference number: 1 (lower is better) Translates to: SALDFPRIFLLHSGT*KVTRSFGLLALGQR Trigger: CCGCTGGCCTAGAGCTAGAAGCCCAAAGCTTCTTGTGACCTTGCAAGTGCCTGAGTGAAGCAAGAATATTCTAGGGAAGTCTAGAGCAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195684.6 |
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3UTR GCA 90 bp | GTTTCTTTCCTTTGCTGGGTGCAGGCACAAAAACATGAGCTAGGGTaGCCCTGTCACAGCAGCATATTACCTGTTAGTGTCTCGTCTCTT | + |
Preference number: 1 (lower is better) Translates to: VSFLCWVQAQKHELG*PCHSSILPVSVSSL Trigger: AAGAGACGAGACACTAACAGGTAATATGCTGCTGTGACAGGGGCACCCTAGCTCATGTTTTTGTGCCTGCACCCAGCAAAGGAAAGAAAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000193793.6 |
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3UTR CCA 90 bp | CCAAGCCTGGGAGAGAGCCATGTACCCTTGAGATGCAGTAAAGATTaGCTCATAGAAAATGCCTCGGAGCGCATAAAATTCTCCAGTTGG | + |
Preference number: 1 (lower is better) Translates to: PSLGESHVPLRCSKD*LIENASERIKFSSW Trigger: CCAACTGGAGAATTTTATGCGCTCCGAGGCATTTTCTATGAGCCAATCTTTACTGCATCTCAAGGGTACATGGCTCTCTCCCAGGCTTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108044.4 |
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3UTR TCA 90 bp | TGCTCTCTGGCTCCCATTCCCTCTACTGTGGAATCACTGAGCCAATaGATGAGAGCAGTTACTGCCATCAACAATAAGAGCCATGTTTAC | + |
Preference number: 1 (lower is better) Translates to: CSLAPIPSTVESLSQ*MRAVTAINNKSHVY Trigger: GTAAACATGGCTCTTATTGTTGATGGCAGTAACTGCTCTCATTCATTGGCTCAGTGATTCCACAGTAGAGGGAATGGGAGCCAGAGAGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108044.4 |
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3UTR GCA 90 bp | ACAACTCTCTTTAGAGAAACAAAAGTATCTTCCAGTGCCGAGAGATaGATATTTCAGCAGGAGGTGTTGTGTGTGTGTGTGTGTGTGTGT | + |
Preference number: 1 (lower is better) Translates to: TTLFRETKVSSSAER*IFQQEVLCVCVCVC Trigger: ACACACACACACACACACACACAACACCTCCTGCTGAAATATGCATCTCTCGGCACTGGAAGATACTTTTGTTTCTCTAAAGAGAGTTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108044.4 |
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3UTR GCA 90 bp | CAAGTCAACTTTATAAATGACACACAAAATCACTATACACACTGCTaGCACAGAGGCGAGAACAAGCACAGTTACTCCTCCTGTAAAGAC | + |
Preference number: 1 (lower is better) Translates to: QVNFINDTQNHYTHC*HRGENKHSYSSCKD Trigger: GTCTTTACAGGAGGAGTAACTGTGCTTGTTCTCGCCTCTGTGGCAGCAGTGTGTATAGTGATTTTGTGTGTCATTTATAAAGTTGACTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000193793.6 |
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3UTR TCA 90 bp | TCTCCCAACTCTCTTCTGATGCTAGGTTTTCACACACAGCTGTTGTaGCAGCAGATGTTGAATGAATTTACCTTCTTTTCTCAAGTCAGT | + |
Preference number: 1 (lower is better) Translates to: SPNSLLMLGFHTQLL*QQMLNEFTFFSQVS Trigger: ACTGACTTGAGAAAAGAAGGTAAATTCATTCAACATCTGCTGTCACAACAGCTGTGTGTGAAAACCTAGCATCAGAAGAGAGTTGGGAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000087983.8 ENSMUST00000108044.4 ENSMUST00000195684.6 |
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3UTR GCA 90 bp | TATGCTTATGTATATTGTGTTTCTTCTACTGCTATGTTTCTCCTCTaGCCTCTCCACTTGTTGCTCCTATTTGTAGACCCATTTCCCAAC | + |
Preference number: 1 (lower is better) Translates to: YAYVYCVSSTAMFLL*PLHLLLLFVDPFPN Trigger: GTTGGGAAATGGGTCTACAAATAGGAGCAACAAGTGGAGAGGGCAGAGGAGAAACATAGCAGTAGAAGAAACACAATATACATAAGCATA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108044.4 |
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3UTR GCA 90 bp | AACCAAGTCAACTTTATAAATGACACACAAAATCACTATACACACTaGTGCCACAGAGGCGAGAACAAGCACAGTTACTCCTCCTGTAAA | + |
Preference number: 1 (lower is better) Translates to: NQVNFINDTQNHYTH*CHRGENKHSYSSCK Trigger: TTTACAGGAGGAGTAACTGTGCTTGTTCTCGCCTCTGTGGCAGCAGTGTGTATAGTGATTTTGTGTGTCATTTATAAAGTTGACTTGGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000193793.6 |
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3UTR-3UTR CCA 90 bp | CCCACAGACAGCTACTGTTTTGAACCATGGAGGAGGCCCCAGTGTGACAACTCTCCACAACCCACAGGTTaGGAATCACTGCTCCAGAGG | + |
Preference number: 2 (lower is better) Translates to: PTDSYCFEPWRRPQCDNSPQPTG*ESLLQR Trigger: CCTCTGGAGCAGTGATTCCCAACCTGTGGGTTGTGG...AGAGTTGTCACACTGGGGCCTCCTCCATGGTTCAAAACAGTAGCTGTCTGTGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108044.4 |
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3UTR CAA 90 bp | TCTCACCTCTTGCACCTCCCAAGCCTGGGAGAGAGCCATGTACCCTaGAGATGCAGTAAAGATTGGCTCATAGAAAATGCCTCGGAGCGC | + |
Preference number: 2 (lower is better) Translates to: SHLLHLPSLGESHVP*RCSKDWLIENASER Trigger: GCGCTCCGAGGCATTTTCTATGAGCCAATCTTTACTGCATCTCAAGGGTACATGGCTCTCTCCCAGGCTTGGGAGGTGCAAGAGGTGAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108044.4 |
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3UTR-3UTR GCA 90 bp | GGCCAGCGGTTCTCAACCTTCCTAATGCTTCAACCCTTTAATACAGTTCTTCACTCCCAAGGCCCCCTCTaGGAGTTCAGGATCACAACC | + |
Preference number: 2 (lower is better) Translates to: GQRFSTFLMLQPFNTVLHSQGPL*EFRITT Trigger: GGTTGTGATCCTGAACTCGCAGAGGGGGCCTTGGGA...GTGAAGAACTGTATTAAAGGGTTGAAGCATTAGGAAGGTTGAGAACCGCTGGCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000087983.8 ENSMUST00000108044.4 ENSMUST00000195684.6 |
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3UTR-3UTR TCA 90 bp | ACTAACAGCACAAGACGTGTGAGGAGACAGTTCACAGACATGAGACATCAGAAGGCAGGCACAAAAACATaGGCTAGGGTGCCCCTGTCA | + |
Preference number: 2 (lower is better) Translates to: TNSTRRVRRQFTDMRHQKAGTKT*ARVPLS Trigger: TGACAGGGGCACCCTAGCTCATGTTTTTGTGCCTGC...CTTCTGATGTCTCATGTCTGTGAACTGTCTCCTCACACGTCTTGTGCTGTTAGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000193793.6 |
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3UTR-3UTR GCA 90 bp | CGAAGCTTGGCTGATAGAAGAACAAAGCGAAGTCTCAAACTCTCCCAACTCTCTACCCATTTCCCAACCTaGTCTCTGGCTCCCATTCCC | + |
Preference number: 2 (lower is better) Translates to: RSLADRRTKRSLKLSQLSTHFPT*SLAPIP Trigger: GGGAATGGGAGCCAGAGAGCAGGTTGGGAAATGGGT...AGAGAGTTGGGAGAGTTTGAGACTTCGCTTTGTTCTTCTATCAGCCAAGCTTCG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108044.4 |
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3UTR-3UTR GCA 90 bp | CTGTGTTTGTTCAGCACAGTCTCTGCTCTAGACTTCCCTAGAATATTCTTGCTTTCCCAAGGCCCCCTCTaGGAGTTCAGGATCACAACC | + |
Preference number: 2 (lower is better) Translates to: LCLFSTVSALDFPRIFLLSQGPL*EFRITT Trigger: GGTTGTGATCCTGAACTCGCAGAGGGGGCCTTGGGA...AAGCAAGAATATTCTAGGGAAGTCTAGAGCAGAGACTGTGCTGAACAAACACAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000087983.8 ENSMUST00000108044.4 ENSMUST00000195684.6 |
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3UTR-3UTR CCA 90 bp | GAAGCTTGGCTGATAGAAGAACAAAGCGAAGTCTCAAACTCTCCCAACTCTCTTCCACAACCCACAGGTTaGGAATCACTGCTCCAGAGG | + |
Preference number: 2 (lower is better) Translates to: EAWLIEEQSEVSNSPNSLPQPTG*ESLLQR Trigger: CCTCTGGAGCAGTGATTCCCAACCTGTGGGTTGTGG...AAGAGAGTTGGGAGAGTTTGAGACTTCGCTTTGTTCTTCTATCAGCCAAGCTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000087983.8 ENSMUST00000108044.4 ENSMUST00000195684.6 |
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3UTR-3UTR CCA 90 bp | CAGGTTCCATTTCAAAGGATGTACGAAAAGGTTGAAGAAACAAGGAAGTCCTGCTGCACCTCCCAAGCCTaGGAGAGAGCCATGTACCCT | + |
Preference number: 2 (lower is better) Translates to: QVPFQRMYEKVEETRKSCCTSQA*ERAMYP Trigger: AGGGTACATGGCTCTCTCCCAGGCTTGGGAGGTGCA...GCAGGACTTCCTTGTTTCTTCAACCTTTTCGTACATCCTTTGAAATGGAACCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108044.4 |
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3UTR-3UTR GCA 90 bp | GCCATCAACAATAAGAGCCATGTTTACAGAGTAGTCTTTAGTGCCCTTGGGAACTTTTCTCTCACCTCTTaGACCTCCCAAGCCTGGGAG | + |
Preference number: 2 (lower is better) Translates to: AINNKSHVYRVVFSALGNFSLTS*TSQAWE Trigger: CTCCCAGGCTTGGGAGGTGCAAGAGGTGAGAGAAAA...GTTCCCAAGGGCACTAAAGACTACTCTGTAAACATGGCTCTTATTGTTGATGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108044.4 |
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3UTR-3UTR GCA 90 bp | AGCACAAGACGTGTGAGGAGACAGTTCACAGACATGAGACATCAGAAGAAACACCACTATACACACTGCTaGCACAGAGGCGAGAACAAG | + |
Preference number: 2 (lower is better) Translates to: STRRVRRQFTDMRHQKKHHYTHC*HRGENK Trigger: CTTGTTCTCGCCTCTGTGGCAGCAGTGTGTATAGTG...GTGTTTCTTCTGATGTCTCATGTCTGTGAACTGTCTCCTCACACGTCTTGTGCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000193793.6 |
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3UTR-3UTR CCA 90 bp | CGAAGCTTGGCTGATAGAAGAACAAAGCGAAGTCTCAAACTCTCCCAACTCTCTAGCCTACCTCCATCTTaGCTGAATGGAACGGTATGC | + |
Preference number: 2 (lower is better) Translates to: RSLADRRTKRSLKLSQLSSLPPS*LNGTVC Trigger: GCATACCGTTCCATTCAGCCAAGATGGAGGTAGGCT...AGAGAGTTGGGAGAGTTTGAGACTTCGCTTTGTTCTTCTATCAGCCAAGCTTCG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108044.4 |
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3UTR CAA 90 bp | GTCAACTGCCACACCAAAACTGCCTGCATGCCCAGGGCACCAGAATaGGCTCATAAAAACAGCAAGCATTTGTTGATTGTTTGCTACAGT | + |
Preference number: 2 (lower is better) Translates to: VNCHTKTACMPRAPE*AHKNSKHLLIVCYS Trigger: ACTGTAGCAAACAATCAACAAATGCTTGCTGTTTTTATGAGCCAATTCTGGTGCCCTGGGCATGCAGGCAGTTTTGGTGTGGCAGTTGAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000108044.4 |
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3UTR CAA 90 bp | TATTGTGTTTCTTCTACTGCTATGTTTCTCCTCTGCCCTCTCCACTaGTTGCTCCTATTTGTAGACCCATTTCCCAACCTGCTCTCTGGC | + |
Preference number: 2 (lower is better) Translates to: YCVSSTAMFLLCPLH*LLLFVDPFPNLLSG Trigger: GCCAGAGAGCAGGTTGGGAAATGGGTCTACAAATAGGAGCAACAAGTGGAGAGGGCAGAGGAGAAACATAGCAGTAGAAGAAACACAATA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108044.4 |
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3UTR-3UTR TCA 90 bp | CTGTGTTTGTTCAGCACAGTCTCTGCTCTAGACTTCCCTAGAATATTCTTGCTTACTCAGGCACTTGGCTaGATGGAACGGTATGCAGAC | + |
Preference number: 2 (lower is better) Translates to: LCLFSTVSALDFPRIFLLTQALG*MERYAD Trigger: GTCTGCATACCGTTCCATTCAGCCAAGTGCCTGAGT...AAGCAAGAATATTCTAGGGAAGTCTAGAGCAGAGACTGTGCTGAACAAACACAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087983.8 |
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3UTR-3UTR TCA 90 bp | CGAAGCTTGGCTGATAGAAGAACAAAGCGAAGTCTCAAACTCTCCCAACTCTCTAGAGCCATGTACCCTTaGGATGCAGTAAAGATTGGC | + |
Preference number: 2 (lower is better) Translates to: RSLADRRTKRSLKLSQLSRAMYP*DAVKIG Trigger: GCCAATCTTTACTGCATCTCAAGGGTACATGGCTCT...AGAGAGTTGGGAGAGTTTGAGACTTCGCTTTGTTCTTCTATCAGCCAAGCTTCG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108044.4 |
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3UTR-3UTR GCA 90 bp | CGAAGCTTGGCTGATAGAAGAACAAAGCGAAGTCTCAAACTCTCCCAACTCTCTTTGGAGATAAAGGTTTaGCAAAGGGGCCACAACCCA | + |
Preference number: 2 (lower is better) Translates to: RSLADRRTKRSLKLSQLSLEIKV*QRGHNP Trigger: TGGGTTGTGGCCCCTTTGGCAAACCTTTATCTCCAA...AGAGAGTTGGGAGAGTTTGAGACTTCGCTTTGTTCTTCTATCAGCCAAGCTTCG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000087983.8 ENSMUST00000108044.4 ENSMUST00000195684.6 |
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3UTR-3UTR GCA 90 bp | AACAAAAGTATCTTCCAGTGCCGAGAGATGCATATTTCAGCAGGAGGTGTTGTGTTGGAGATAAAGGTTTaGCAAAGGGGCCACAACCCA | + |
Preference number: 2 (lower is better) Translates to: NKSIFQCREMHISAGGVVLEIKV*QRGHNP Trigger: TGGGTTGTGGCCCCTTTGGCAAACCTTTATCTCCAA...CACAACACCTCCTGCTGAAATATGCATCTCTCGGCACTGGAAGATACTTTTGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108044.4 |
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3UTR-3UTR GCA 90 bp | CTGTGTTTGTTCAGCACAGTCTCTGCTCTAGACTTCCCTAGAATATTCTTGCTTTCCAGTGCCGAGAGATaGATATTTCAGCAGGAGGTG | + |
Preference number: 2 (lower is better) Translates to: LCLFSTVSALDFPRIFLLSSAER*IFQQEV Trigger: CACCTCCTGCTGAAATATGCATCTCTCGGCACTGGA...AAGCAAGAATATTCTAGGGAAGTCTAGAGCAGAGACTGTGCTGAACAAACACAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108044.4 |
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3UTR-3UTR TCA 90 bp | ATGTGTCGAAGCTTGGCTGATAGAAGAACAAAGCGAAGTCTCAAACTCTCCCAACACACACAGCTGTTGTaGCAGCAGATGTTGAATGAA | + |
Preference number: 2 (lower is better) Translates to: MCRSLADRRTKRSLKLSQHTQLL*QQMLNE Trigger: TTCATTCAACATCTGCTGTCACAACAGCTGTGTGTG...TTGGGAGAGTTTGAGACTTCGCTTTGTTCTTCTATCAGCCAAGCTTCGACACAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000087983.8 ENSMUST00000108044.4 ENSMUST00000195684.6 |
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3UTR-3UTR TCA 90 bp | TGCATGCCCAGGGCACCAGAATTGGCTCATAAAAACAGCAAGCATTTGTTGATTCACACACAGCTGTTGTaGCAGCAGATGTTGAATGAA | + |
Preference number: 2 (lower is better) Translates to: CMPRAPELAHKNSKHLLIHTQLL*QQMLNE Trigger: TTCATTCAACATCTGCTGTCACAACAGCTGTGTGTG...AATCAACAAATGCTTGCTGTTTTTATGAGCCAATTCTGGTGCCCTGGGCATGCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000108044.4 |
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3UTR-3UTR CCA 90 bp | AGCACAAGACGTGTGAGGAGACAGTTCACAGACATGAGACATCAGAAGAAACACGTTTCTTTCCTTTGCTaGGTGCAGGCACAAAAACAT | + |
Preference number: 2 (lower is better) Translates to: STRRVRRQFTDMRHQKKHVSFLC*VQAQKH Trigger: ATGTTTTTGTGCCTGCACCCAGCAAAGGAAAGAAAC...GTGTTTCTTCTGATGTCTCATGTCTGTGAACTGTCTCCTCACACGTCTTGTGCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000167723.8 ENSMUST00000193391.6 ENSMUST00000193793.6 |
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3UTR CAA 90 bp | TGCATGCCCAGGGCACCAGAATTGGCTCATAAAAACAGCAAGCATTaGTTGATTGTTTGCTACAGTTTAGCAGCTAGTATGATCCTACAG | + |
Preference number: 2 (lower is better) Translates to: CMPRAPELAHKNSKH*LIVCYSLAASMILQ Trigger: CTGTAGGATCATACTAGCTGCTAAACTGTAGCAAACAATCAACAAATGCTTGCTGTTTTTATGAGCCAATTCTGGTGCCCTGGGCATGCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000108044.4 |
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3UTR-3UTR TCA 90 bp | ATATCGCAGGTTCCATTTCAAAGGATGTACGAAAAGGTTGAAGAAACAAGGAAGACACCAAACTCATCCTaGAGCCAAGTTCCTGGAGCT | + |
Preference number: 2 (lower is better) Translates to: ISQVPFQRMYEKVEETRKTPNSS*SQVPGA Trigger: AGCTCCAGGAACTTGGCTTCAGGATGAGTTTGGTGT...CTTCCTTGTTTCTTCAACCTTTTCGTACATCCTTTGAAATGGAACCTGCGATAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108044.4 |
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3UTR-3UTR TCA 90 bp | GCCATCAACAATAAGAGCCATGTTTACAGAGTAGTCTTTAGTGCCCTTGGGAACGATGTACGAAAAGGTTaGAGAAACAAGGAAGTCCTG | + |
Preference number: 2 (lower is better) Translates to: AINNKSHVYRVVFSALGNDVRKG*RNKEVL Trigger: CAGGACTTCCTTGTTTCTTCAACCTTTTCGTACATC...GTTCCCAAGGGCACTAAAGACTACTCTGTAAACATGGCTCTTATTGTTGATGGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108044.4 |
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3UTR-3UTR GCA 90 bp | TTCTCAACCTTCCTAATGCTTCAACCCTTTAATACAGTTCTTCACACTGTGGTGTTGGAGATAAAGGTTTaGCAAAGGGGCCACAACCCA | + |
Preference number: 2 (lower is better) Translates to: FSTFLMLQPFNTVLHTVVLEIKV*QRGHNP Trigger: TGGGTTGTGGCCCCTTTGGCAAACCTTTATCTCCAA...CACCACAGTGTGAAGAACTGTATTAAAGGGTTGAAGCATTAGGAAGGTTGAGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000087983.8 ENSMUST00000108044.4 ENSMUST00000195684.6 |
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3UTR-3UTR GCA 90 bp | CTGTCTGCAATAAACGATATCGCAGGTTCCATTTCAAAGGATGTACGAAAAGGTGGGCATAAATCAGTTTaGCAGCCTACCTCCATCTTG | + |
Preference number: 2 (lower is better) Translates to: LSAINDIAGSISKDVRKGGHKSV*QPTSIL Trigger: CAAGATGGAGGTAGGCTGGCAAACTGATTTATGCCC...ACCTTTTCGTACATCCTTTGAAATGGAACCTGCGATATCGTTTATTGCAGACAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108044.4 |
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3UTR-3UTR CCA 90 bp | TATAAAATAAACTTCATGTGTCGAAGCTTGGCTGATAGAAGAACAAAGCGAAGTCCACAACCCACAGGTTaGGAATCACTGCTCCAGAGG | + |
Preference number: 2 (lower is better) Translates to: YKINFMCRSLADRRTKRSPQPTG*ESLLQR Trigger: CCTCTGGAGCAGTGATTCCCAACCTGTGGGTTGTGG...ACTTCGCTTTGTTCTTCTATCAGCCAAGCTTCGACACATGAAGTTTATTTTATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000087983.8 ENSMUST00000108044.4 ENSMUST00000195684.6 |
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3UTR-3UTR TCA 90 bp | TGGGAACGAGGCTCAGAGATCATTAGTGGGATCATTCAAATAAAAGGAAGACCAGACAGTTCACAGACATaGGACATCAGAAGAAACACA | + |
Preference number: 2 (lower is better) Translates to: WERGSEIISGIIQIKGRPDSSQT*DIRRNT Trigger: TGTGTTTCTTCTGATGTCTCATGTCTGTGAACTGTC...TGGTCTTCCTTTTATTTGAATGATCCCACTAATGATCTCTGAGCCTCGTTCCCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000167723.8 ENSMUST00000193391.6 ENSMUST00000193793.6 |
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3UTR CAA 90 bp | ATGCCCAGGGCACCAGAATTGGCTCATAAAAACAGCAAGCATTTGTaGATTGTTTGCTACAGTTTAGCAGCTAGTATGATCCTACAGATA | + |
Preference number: 2 (lower is better) Translates to: MPRAPELAHKNSKHL*IVCYSLAASMILQI Trigger: TATCTGTAGGATCATACTAGCTGCTAAACTGTAGCAAACAATCAACAAATGCTTGCTGTTTTTATGAGCCAATTCTGGTGCCCTGGGCAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000108044.4 |
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3UTR-3UTR CCA 90 bp | TATAAAATAAACTTCATGTGTCGAAGCTTGGCTGATAGAAGAACAAAGCGAAGTCTTCACTCAGGCACTTaGCTGAATGGAACGGTATGC | + |
Preference number: 2 (lower is better) Translates to: YKINFMCRSLADRRTKRSLHSGT*LNGTVC Trigger: GCATACCGTTCCATTCAGCCAAGTGCCTGAGTGAAG...ACTTCGCTTTGTTCTTCTATCAGCCAAGCTTCGACACATGAAGTTTATTTTATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087983.8 |
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3UTR-3UTR CCA 90 bp | GTCTCTTTCCGCTATGCGCCTATAGAACAGAACCAAGTCAACTTTATAAATGACGTTTCTTTCCTTTGCTaGGTGCAGGCACAAAAACAT | + |
Preference number: 2 (lower is better) Translates to: VSFRYAPIEQNQVNFINDVSFLC*VQAQKH Trigger: ATGTTTTTGTGCCTGCACCCAGCAAAGGAAAGAAAC...GTCATTTATAAAGTTGACTTGGTTCTGTTCTATAGGCGCATAGCGGAAAGAGAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000193793.6 |
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3UTR-3UTR TCA 90 bp | CTGTCTGCAATAAACGATATCGCAGGTTCCATTTCAAAGGATGTACGAAAAGGTGAATCCACTGTTAGTTaGAAAATTCTGAAGAGGTGC | + |
Preference number: 2 (lower is better) Translates to: LSAINDIAGSISKDVRKGESTVS*KILKRC Trigger: GCACCTCTTCAGAATTTTTCAACTAACAGTGGATTC...ACCTTTTCGTACATCCTTTGAAATGGAACCTGCGATATCGTTTATTGCAGACAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108044.4 |
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3UTR-3UTR TCA 90 bp | TATAAAATAAACTTCATGTGTCGAAGCTTGGCTGATAGAAGAACAAAGCGAAGTCACACACAGCTGTTGTaGCAGCAGATGTTGAATGAA | + |
Preference number: 2 (lower is better) Translates to: YKINFMCRSLADRRTKRSHTQLL*QQMLNE Trigger: TTCATTCAACATCTGCTGTCACAACAGCTGTGTGTG...ACTTCGCTTTGTTCTTCTATCAGCCAAGCTTCGACACATGAAGTTTATTTTATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000087983.8 ENSMUST00000108044.4 ENSMUST00000195684.6 |
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3UTR CAA 90 bp | GTGTTTTTGTATGTATGTATGTTTATGTGTGTATGCTTATGTATATaGTGTTTCTTCTACTGCTATGTTTCTCCTCTGCCCTCTCCACTT | + |
Preference number: 2 (lower is better) Translates to: VFLYVCMFMCVCLCI*CFFYCYVSPLPSPL Trigger: AAGTGGAGAGGGCAGAGGAGAAACATAGCAGTAGAAGAAACACAATATACATAAGCATACACACATAAACATACATACATACAAAAACAC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000108044.4 |
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3UTR CCA 72 bp | AAATCAGTTTGCCAGCCTACCTCCATCTTGGCTGAATaGAACGGTATGCAGACAGCTCTAGGCCAGCGGTTC | + |
Preference number: 3 (lower is better) Translates to: KSVCQPTSILAE*NGMQTALGQRF Trigger: GAACCGCTGGCCTAGAGCTGTCTGCATACCGTTCCATTCAGCCAAGATGGAGGTAGGCTGGCAAACTGATTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108044.4 |
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3UTR TCA 72 bp | TCCCTAGAATATTCTTGCTTCACTCAGGCACTTGGCTaGATGGAACGGTATGCAGACAGCTCTAGGCCAGCG | + |
Preference number: 3 (lower is better) Translates to: SLEYSCFTQALG*MERYADSSRPA Trigger: CGCTGGCCTAGAGCTGTCTGCATACCGTTCCATTCAGCCAAGTGCCTGAGTGAAGCAAGAATATTCTAGGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087983.8 |
||
3UTR GCA 72 bp | CTCCCAAGCCTGGGAGAGAGCCATGTACCCTTGAGATaGAGTAAAGATTGGCTCATAGAAAATGCCTCGGAG | + |
Preference number: 3 (lower is better) Translates to: LPSLGESHVPLR*SKDWLIENASE Trigger: CTCCGAGGCATTTTCTATGAGCCAATCTTTACTGCATCTCAAGGGTACATGGCTCTCTCCCAGGCTTGGGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108044.4 |
||
3UTR GCA 72 bp | CTTTGCTGGGTGCAGGCACAAAAACATGAGCTAGGGTaGCCCTGTCACAGCAGCATATTACCTGTTAGTGTC | + |
Preference number: 3 (lower is better) Translates to: LCWVQAQKHELG*PCHSSILPVSV Trigger: GACACTAACAGGTAATATGCTGCTGTGACAGGGGCACCCTAGCTCATGTTTTTGTGCCTGCACCCAGCAAAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000193793.6 |
||
3UTR TCA 72 bp | CACAAAATTCAGCCTTTTGAACCACAGCTACCGCTGTaGATAGGCACACGCATGACCTCTAGCAGCGCTTCA | + |
Preference number: 3 (lower is better) Translates to: HKIQPFEPQLPL*IGTRMTSSSAS Trigger: TGAAGCGCTGCTAGAGGTCATGCGTGTGCCTATTCACAGCGGTAGCTGTGGTTCAAAAGGCTGAATTTTGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000087983.8 ENSMUST00000108044.4 ENSMUST00000195684.6 |
||
3UTR TCA 72 bp | TGTTTCTTTCCTTTGCTGGGTGCAGGCACAAAAACATaGGCTAGGGTGCCCCTGTCACAGCAGCATATTACC | + |
Preference number: 3 (lower is better) Translates to: CFFPLLGAGTKT*ARVPLSQQHIT Trigger: GGTAATATGCTGCTGTGACAGGGGCACCCTAGCTCATGTTTTTGTGCCTGCACCCAGCAAAGGAAAGAAACA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000193793.6 |
||
3UTR-3UTR CAA 90 bp | TTCAGCACAGTCTCTGCTCTAGACTTCCCTAGAATATTCTTGCTTCACTCAGGCTTTGGAGATAAAGGTTaGCCAAAGGGGCCACAACCC | + |
Preference number: 3 (lower is better) Translates to: FSTVSALDFPRIFLLHSGFGDKG*PKGPQP Trigger: GGGTTGTGGCCCCTTTGGCAAACCTTTATCTCCAAA...GCCTGAGTGAAGCAAGAATATTCTAGGGAAGTCTAGAGCAGAGACTGTGCTGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000087983.8 ENSMUST00000108044.4 ENSMUST00000195684.6 |
||
3UTR-3UTR CAA 90 bp | CTGTGTTTGTTCAGCACAGTCTCTGCTCTAGACTTCCCTAGAATATTCTTGCTTGCTTCACTCAGGCACTaGGCTGAATGGAACGGTATG | + |
Preference number: 3 (lower is better) Translates to: LCLFSTVSALDFPRIFLLASLRH*AEWNGM Trigger: CATACCGTTCCATTCAGCCAAGTGCCTGAGTGAAGC...AAGCAAGAATATTCTAGGGAAGTCTAGAGCAGAGACTGTGCTGAACAAACACAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087983.8 |
||
3UTR-3UTR CAA 90 bp | GCCATCAACAATAAGAGCCATGTTTACAGAGTAGTCTTTAGTGCCCTTGGGAACCCCAGGGCACCAGAATaGGCTCATAAAAACAGCAAG | + |
Preference number: 3 (lower is better) Translates to: AINNKSHVYRVVFSALGNPRAPE*AHKNSK Trigger: CTTGCTGTTTTTATGAGCCAATTCTGGTGCCCTGGG...GTTCCCAAGGGCACTAAAGACTACTCTGTAAACATGGCTCTTATTGTTGATGGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000108044.4 |
||
3UTR TCA 72 bp | GGAATCACTGCTCCAGAGGAAGAAAGAATAACAAACTaGTTTCTTGTGAATCCCAAGGCCCCCTCTGCGAGT | + |
Preference number: 3 (lower is better) Translates to: GITAPEEERITN*FLVNPKAPSAS Trigger: ACTCGCAGAGGGGGCCTTGGGATTCACAAGAAATCAGTTTGTTATTCTTTCTTCCTCTGGAGCAGTGATTCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000087983.8 ENSMUST00000108044.4 ENSMUST00000195684.6 |
||
3UTR GCA 72 bp | AACAAACTGATTTCTTGTGAATCCCAAGGCCCCCTCTaGGAGTTCAGGATCACAACCAAGGCTCTGTTTCAT | + |
Preference number: 3 (lower is better) Translates to: NKLISCESQGPL*EFRITTKALFH Trigger: ATGAAACAGAGCCTTGGTTGTGATCCTGAACTCGCAGAGGGGGCCTTGGGATTCACAAGAAATCAGTTTGTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000087983.8 ENSMUST00000108044.4 ENSMUST00000195684.6 |
||
3UTR CCA 72 bp | TCAAATAAAAGGAAGACCAGTGTTTCTTTCCTTTGCTaGGTGCAGGCACAAAAACATGAGCTAGGGTGCCCC | + |
Preference number: 3 (lower is better) Translates to: SNKRKTSVSFLC*VQAQKHELGCP Trigger: GGGGCACCCTAGCTCATGTTTTTGTGCCTGCACCCAGCAAAGGAAAGAAACACTGGTCTTCCTTTTATTTGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000167723.8 ENSMUST00000193391.6 ENSMUST00000193793.6 |
||
3UTR-3UTR CAA 90 bp | TTCAGCACAGTCTCTGCTCTAGACTTCCCTAGAATATTCTTGCTTCACTCAGGCACAAAATTCAGCCTTTaGAACCACAGCTACCGCTGT | + |
Preference number: 3 (lower is better) Translates to: FSTVSALDFPRIFLLHSGTKFSL*NHSYRC Trigger: ACAGCGGTAGCTGTGGTTCAAAAGGCTGAATTTTGT...GCCTGAGTGAAGCAAGAATATTCTAGGGAAGTCTAGAGCAGAGACTGTGCTGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000087983.8 ENSMUST00000108044.4 ENSMUST00000195684.6 |
||
3UTR-3UTR CAA 90 bp | CTGTGTTTGTTCAGCACAGTCTCTGCTCTAGACTTCCCTAGAATATTCTTGCTTTTTGGAGATAAAGGTTaGCCAAAGGGGCCACAACCC | + |
Preference number: 3 (lower is better) Translates to: LCLFSTVSALDFPRIFLLFGDKG*PKGPQP Trigger: GGGTTGTGGCCCCTTTGGCAAACCTTTATCTCCAAA...AAGCAAGAATATTCTAGGGAAGTCTAGAGCAGAGACTGTGCTGAACAAACACAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000087983.8 ENSMUST00000108044.4 ENSMUST00000195684.6 |
||
3UTR-3UTR CAA 90 bp | GGCTGGGAACGAGGCTCAGAGATCATTAGTGGGATCATTCAAATAAAAGGAAGACAGTGTTTCTTTCCTTaGCTGGGTGCAGGCACAAAA | + |
Preference number: 3 (lower is better) Translates to: GWERGSEIISGIIQIKGRQCFFP*LGAGTK Trigger: TTTTGTGCCTGCACCCAGCAAAGGAAAGAAACACTG...TCTTCCTTTTATTTGAATGATCCCACTAATGATCTCTGAGCCTCGTTCCCAGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000167723.8 ENSMUST00000193391.6 ENSMUST00000193793.6 |
||
3UTR CCA 72 bp | GGAGAGAGCCATGTACCCTTGAGATGCAGTAAAGATTaGCTCATAGAAAATGCCTCGGAGCGCATAAAATTC | + |
Preference number: 3 (lower is better) Translates to: GESHVPLRCSKD*LIENASERIKF Trigger: GAATTTTATGCGCTCCGAGGCATTTTCTATGAGCCAATCTTTACTGCATCTCAAGGGTACATGGCTCTCTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108044.4 |
||
3UTR TCA 72 bp | CTTTCTAAGAACTACCTTGCAACACCAAACTCATCCTaGAGCCAAGTTCCTGGAGCTTTCTCTCATCCCATT | + |
Preference number: 3 (lower is better) Translates to: LSKNYLATPNSS*SQVPGAFSHPI Trigger: AATGGGATGAGAGAAAGCTCCAGGAACTTGGCTTCAGGATGAGTTTGGTGTTGCAAGGTAGTTCTTAGAAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108044.4 |
||
3UTR-3UTR CAA 90 bp | TGCATGCCCAGGGCACCAGAATTGGCTCATAAAAACAGCAAGCATTTGTTGATTCTCATCCCATTTCTCTaGTGTTTCCAGCTTTTTCTC | + |
Preference number: 3 (lower is better) Translates to: CMPRAPELAHKNSKHLLILIPFL*CFQLFL Trigger: GAGAAAAAGCTGGAAACACAAGAGAAATGGGATGAG...AATCAACAAATGCTTGCTGTTTTTATGAGCCAATTCTGGTGCCCTGGGCATGCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000108044.4 |
||
3UTR GCA 72 bp | TTTATAAATGACACACAAAATCACTATACACACTGCTaGCACAGAGGCGAGAACAAGCACAGTTACTCCTCC | + |
Preference number: 3 (lower is better) Translates to: FINDTQNHYTHC*HRGENKHSYSS Trigger: GGAGGAGTAACTGTGCTTGTTCTCGCCTCTGTGGCAGCAGTGTGTATAGTGATTTTGTGTGTCATTTATAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000193793.6 |
||
3UTR-3UTR CAA 90 bp | TTCTCAACCTTCCTAATGCTTCAACCCTTTAATACAGTTCTTCACACTGTGGTGACAAAATTCAGCCTTTaGAACCACAGCTACCGCTGT | + |
Preference number: 3 (lower is better) Translates to: FSTFLMLQPFNTVLHTVVTKFSL*NHSYRC Trigger: ACAGCGGTAGCTGTGGTTCAAAAGGCTGAATTTTGT...CACCACAGTGTGAAGAACTGTATTAAAGGGTTGAAGCATTAGGAAGGTTGAGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000087983.8 ENSMUST00000108044.4 ENSMUST00000195684.6 |
||
3UTR-3UTR CAA 90 bp | ATGTGTCGAAGCTTGGCTGATAGAAGAACAAAGCGAAGTCTCAAACTCTCCCAATGTGCGGTTCTATGTTaGTGTTTATGTGTGTTTCTG | + |
Preference number: 3 (lower is better) Translates to: MCRSLADRRTKRSLKLSQCAVLC*CLCVFL Trigger: CAGAAACACACATAAACACAAACATAGAACCGCACA...TTGGGAGAGTTTGAGACTTCGCTTTGTTCTTCTATCAGCCAAGCTTCGACACAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108044.4 |
||
3UTR GCA 72 bp | AACTTTATAAATGACACACAAAATCACTATACACACTaGTGCCACAGAGGCGAGAACAAGCACAGTTACTCC | + |
Preference number: 3 (lower is better) Translates to: NFINDTQNHYTH*CHRGENKHSYS Trigger: GGAGTAACTGTGCTTGTTCTCGCCTCTGTGGCAGCAGTGTGTATAGTGATTTTGTGTGTCATTTATAAAGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000193793.6 |
||
3UTR-3UTR CAA 90 bp | CTGTGTTTGTTCAGCACAGTCTCTGCTCTAGACTTCCCTAGAATATTCTTGCTTTCACAAAATCCAAGATaGTCCATCAAATTTGGCTGC | + |
Preference number: 3 (lower is better) Translates to: LCLFSTVSALDFPRIFLLSQNPR*SIKFGC Trigger: GCAGCCAAATTTGATGGACAATCTTGGATTTTGTGA...AAGCAAGAATATTCTAGGGAAGTCTAGAGCAGAGACTGTGCTGAACAAACACAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108044.4 |
||
3UTR GCA 72 bp | GCATATTACCTGTTAGTGTCTCGTCTCTTTCCGCTATaGGCCTATAGAACAGAACCAAGTCAACTTTATAAA | + |
Preference number: 3 (lower is better) Translates to: AYYLLVSRLFPL*AYRTEPSQLYK Trigger: TTTATAAAGTTGACTTGGTTCTGTTCTATAGGCGCATAGCGGAAAGAGACGAGACACTAACAGGTAATATGC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000193793.6 |
||
3UTR-3UTR CAA 90 bp | AATCTACTGTGTTTGTTCAGCACAGTCTCTGCTCTAGACTTCCCTAGAATATTCCTTTGTAACTGTGAGTaGGCTACAGTTATGAATCAT | + |
Preference number: 3 (lower is better) Translates to: NLLCLFSTVSALDFPRIFLCNCE*ATVMNH Trigger: ATGATTCATAACTGTAGCCAACTCACAGTTACAAAG...GAATATTCTAGGGAAGTCTAGAGCAGAGACTGTGCTGAACAAACACAGTAGATT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000087983.8 ENSMUST00000108044.4 ENSMUST00000195684.6 |
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3UTR TCA 72 bp | TTTTCACACACAGCTGTTGTGACAGCAGATGTTGAATaGATTTACCTTCTTTTCTCAAGTCAGTCAAATAGC | + |
Preference number: 3 (lower is better) Translates to: FSHTAVVTADVE*IYLLFSSQSNS Trigger: GCTATTTGACTGACTTGAGAAAAGAAGGTAAATTCATTCAACATCTGCTGTCACAACAGCTGTGTGTGAAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000087983.8 ENSMUST00000108044.4 ENSMUST00000195684.6 |
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3UTR TCA 72 bp | TTCTCCAGTTGGAATCCACTGTTAGTTGAAAAATTCTaGAGAGGTGCCTTATTTAGGGGCATAAATCAGTTT | + |
Preference number: 3 (lower is better) Translates to: FSSWNPLLVEKF*RGALFRGINQF Trigger: AAACTGATTTATGCCCCTAAATAAGGCACCTCTTCAGAATTTTTCAACTAACAGTGGATTCCAACTGGAGAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000108044.4 |
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CDS-3UTR CCA 90 bp | CCCACAGACAGCTACTGTTTTGAACCATGGAGGAGGCCCCAGTGTGACAACTCTCGTGTCCCATTATGGTaGACAGAAAACACGCAGGAG | + |
Preference number: 4 (lower is better) Translates to: PTDSYCFEPWRRPQCDNSRVPLW*TENTQE Trigger: CTCCTGCGTGTTTTCTGTCCACCATAATGGGACACG...AGAGTTGTCACACTGGGGCCTCCTCCATGGTTCAAAACAGTAGCTGTCTGTGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000108044.4 |
||
CDS-3UTR CCA 90 bp | CACTTGCAAGGTCACAAGAAGCTTTGGGCTTCTAGCTCTAGGCCAGCGGTTCTCCGTGTCCCATTATGGTaGACAGAAAACACGCAGGAG | + |
Preference number: 4 (lower is better) Translates to: HLQGHKKLWASSSRPAVLRVPLW*TENTQE Trigger: CTCCTGCGTGTTTTCTGTCCACCATAATGGGACACG...GAGAACCGCTGGCCTAGAGCTAGAAGCCCAAAGCTTCTTGTGACCTTGCAAGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000195684.6 |
||
CDS-3UTR GCA 90 bp | CACTTGCAAGGTCACAAGAAGCTTTGGGCTTCTAGCTCTAGGCCAGCGGTTCTCGCTGTTTCATTCCTGTaGACTGGTGCAGATATGCCA | + |
Preference number: 4 (lower is better) Translates to: HLQGHKKLWASSSRPAVLAVSFL*TGADMP Trigger: TGGCATATCTGCACCAGTGCACAGGAATGAAACAGC...GAGAACCGCTGGCCTAGAGCTAGAAGCCCAAAGCTTCTTGTGACCTTGCAAGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195684.6 |
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CDS-3UTR TCA 90 bp | GTGCAGGCACAAAAACATGAGCTAGGGTGCCCCTGTCACAGCAGCATATTACCTTTGCACATTAGGGTCTaGGCTGTCCTCTTTCCTGAT | + |
Preference number: 4 (lower is better) Translates to: VQAQKHELGCPCHSSILPLHIRV*AVLFPD Trigger: ATCAGGAAAGAGGACAGCTCAGACCCTAATGTGCAA...AGGTAATATGCTGCTGTGACAGGGGCACCCTAGCTCATGTTTTTGTGCCTGCAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000193793.6 |
||
CDS-3UTR TCA 90 bp | CACACCAAAACTGCCTGCATGCCCAGGGCACCAGAATTGGCTCATAAAAACAGCATTCTTCCAGAACCTTaGGTTCATGGAGGGACTGTC | + |
Preference number: 4 (lower is better) Translates to: HTKTACMPRAPELAHKNSILPEP*VHGGTV Trigger: GACAGTCCCTCCATGAACTCAAGGTTCTGGAAGAAT...GCTGTTTTTATGAGCCAATTCTGGTGCCCTGGGCATGCAGGCAGTTTTGGTGTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000108044.4 |
||
CDS-3UTR GCA 90 bp | GGCGAGAACAAGCACAGTTACTCCTCCTGTAAAGACATGGCCTGGGATATCAGGTCCTTCCTGTCTTCTTaGACATTAGGGTCTGAGCTG | + |
Preference number: 4 (lower is better) Translates to: GENKHSYSSCKDMAWDIRSFLSS*TLGSEL Trigger: CAGCTCAGACCCTAATGTGCAAGAAGACAGGAAGGA...CCTGATATCCCAGGCCATGTCTTTACAGGAGGAGTAACTGTGCTTGTTCTCGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000193793.6 |
||
CDS-3UTR CCA 90 bp | TTGGAGATAAAGGTTTGCCAAAGGGGCCACAACCCACAGGTTGGGAATCACTGCATCCTCCATCTCAACTaGCCAGAATTCCAAGGTGTG | + |
Preference number: 4 (lower is better) Translates to: LEIKVCQRGHNPQVGNHCILHLN*PEFQGV Trigger: CACACCTTGGAATTCTGGCCAGTTGAGATGGAGGAT...GCAGTGATTCCCAACCTGTGGGTTGTGGCCCCTTTGGCAAACCTTTATCTCCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000087983.8 ENSMUST00000108044.4 ENSMUST00000195684.6 |
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CDS-3UTR CCA 90 bp | ATGTGTCGAAGCTTGGCTGATAGAAGAACAAAGCGAAGTCTCAAACTCTCCCAACGACTCCTCTCTCCATaGCTTGACGGCTTTTGCGGG | + |
Preference number: 4 (lower is better) Translates to: MCRSLADRRTKRSLKLSQRLLSP*LDGFCG Trigger: CCCGCAAAAGCCGTCAAGCCATGGAGAGAGGAGTCG...TTGGGAGAGTTTGAGACTTCGCTTTGTTCTTCTATCAGCCAAGCTTCGACACAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000087983.8 ENSMUST00000108044.4 ENSMUST00000195684.6 |
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CDS-3UTR CCA 90 bp | AACAAAAGTATCTTCCAGTGCCGAGAGATGCATATTTCAGCAGGAGGTGTTGTGCGACTCCTCTCTCCATaGCTTGACGGCTTTTGCGGG | + |
Preference number: 4 (lower is better) Translates to: NKSIFQCREMHISAGGVVRLLSP*LDGFCG Trigger: CCCGCAAAAGCCGTCAAGCCATGGAGAGAGGAGTCG...CACAACACCTCCTGCTGAAATATGCATCTCTCGGCACTGGAAGATACTTTTGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108044.4 |
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3UTR CAA 72 bp | TTGCACCTCCCAAGCCTGGGAGAGAGCCATGTACCCTaGAGATGCAGTAAAGATTGGCTCATAGAAAATGCC | + |
Preference number: 4 (lower is better) Translates to: LHLPSLGESHVP*RCSKDWLIENA Trigger: GGCATTTTCTATGAGCCAATCTTTACTGCATCTCAAGGGTACATGGCTCTCTCCCAGGCTTGGGAGGTGCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108044.4 |
||
3UTR CAA 72 bp | TCCAGTGCCGAGAGATGCATATTTCAGCAGGAGGTGTaGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT | + |
Preference number: 4 (lower is better) Translates to: SSAERCIFQQEV*CVCVCVCVCVC Trigger: ACACACACACACACACACACACACACACACACACAACACCTCCTGCTGAAATATGCATCTCTCGGCACTGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108044.4 |
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CDS-3UTR GCA 90 bp | AAGACCAGTGTTTCTTTCCTTTGCTGGGTGCAGGCACAAAAACATGAGCTAGGGCACTATACACACTGCTaGCACAGAGGCGAGAACAAG | + |
Preference number: 4 (lower is better) Translates to: KTSVSFLCWVQAQKHELGHYTHC*HRGENK Trigger: CTTGTTCTCGCCTCTGTGGCAGCAGTGTGTATAGTG...CCCTAGCTCATGTTTTTGTGCCTGCACCCAGCAAAGGAAAGAAACACTGGTCTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000167723.8 ENSMUST00000193391.6 |
||
CDS-3UTR CCA 90 bp | GTGTGTGTGTGTGTGTGTGTGTGTGTAAACACACTCGGACTAACAGCACAAGACCGTGTCCCATTATGGTaGACAGAAAACACGCAGGAG | + |
Preference number: 4 (lower is better) Translates to: VCVCVCVCVNTLGLTAQDRVPLW*TENTQE Trigger: CTCCTGCGTGTTTTCTGTCCACCATAATGGGACACG...GTCTTGTGCTGTTAGTCCGAGTGTGTTTACACACACACACACACACACACACAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000167723.8 ENSMUST00000193391.6 ENSMUST00000193793.6 |
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CDS-3UTR CCA 90 bp | AGCACAAGACGTGTGAGGAGACAGTTCACAGACATGAGACATCAGAAGAAACACAGCTCTTGGTGTCTATaGCTTCTTCGTTGGCCACGG | + |
Preference number: 4 (lower is better) Translates to: STRRVRRQFTDMRHQKKHSSWCL*LLRWPR Trigger: CCGTGGCCAACGAAGAAGCCATAGACACCAAGAGCT...GTGTTTCTTCTGATGTCTCATGTCTGTGAACTGTCTCCTCACACGTCTTGTGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000167723.8 ENSMUST00000193391.6 |
||
CDS-3UTR CCA 90 bp | TACATCTATTTTGGAGATAAAGGTTTGCCAAAGGGGCCACAACCCACAGGTTGGAGCTCTTGGTGTCTATaGCTTCTTCGTTGGCCACGG | + |
Preference number: 4 (lower is better) Translates to: YIYFGDKGLPKGPQPTGWSSWCL*LLRWPR Trigger: CCGTGGCCAACGAAGAAGCCATAGACACCAAGAGCT...CCAACCTGTGGGTTGTGGCCCCTTTGGCAAACCTTTATCTCCAAAATAGATGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000087983.8 ENSMUST00000108044.4 ENSMUST00000195684.6 |
||
CDS-3UTR CCA 90 bp | CGAAGCTTGGCTGATAGAAGAACAAAGCGAAGTCTCAAACTCTCCCAACTCTCTAGAACCTTGAGTTCATaGAGGGACTGTCAGCCCTCC | + |
Preference number: 4 (lower is better) Translates to: RSLADRRTKRSLKLSQLSRTLSS*RDCQPS Trigger: GGAGGGCTGACAGTCCCTCCATGAACTCAAGGTTCT...AGAGAGTTGGGAGAGTTTGAGACTTCGCTTTGTTCTTCTATCAGCCAAGCTTCG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000087983.8 ENSMUST00000108044.4 ENSMUST00000195684.6 |
||
CDS-3UTR CCA 90 bp | CTGTGTTTGTTCAGCACAGTCTCTGCTCTAGACTTCCCTAGAATATTCTTGCTTCGACTCCTCTCTCCATaGCTTGACGGCTTTTGCGGG | + |
Preference number: 4 (lower is better) Translates to: LCLFSTVSALDFPRIFLLRLLSP*LDGFCG Trigger: CCCGCAAAAGCCGTCAAGCCATGGAGAGAGGAGTCG...AAGCAAGAATATTCTAGGGAAGTCTAGAGCAGAGACTGTGCTGAACAAACACAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000087983.8 ENSMUST00000108044.4 ENSMUST00000195684.6 |
||
3UTR CAA 72 bp | TCTACTGCTATGTTTCTCCTCTGCCCTCTCCACTTGTaGCTCCTATTTGTAGACCCATTTCCCAACCTGCTC | + |
Preference number: 4 (lower is better) Translates to: STAMFLLCPLHL*LLFVDPFPNLL Trigger: GAGCAGGTTGGGAAATGGGTCTACAAATAGGAGCAACAAGTGGAGAGGGCAGAGGAGAAACATAGCAGTAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108044.4 |
||
CDS-3UTR GCA 90 bp | TGTAAACACACTCGGACTAACAGCACAAGACGTGTGAGGAGACAGTTCACAGACATTCCTGTGCACTGGTaGAGATATGCCACATGGCTT | + |
Preference number: 4 (lower is better) Translates to: CKHTRTNSTRRVRRQFTDIPVHW*RYATWL Trigger: AAGCCATGTGGCATATCTGCACCAGTGCACAGGAAT...GTCTGTGAACTGTCTCCTCACACGTCTTGTGCTGTTAGTCCGAGTGTGTTTACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000167723.8 ENSMUST00000193391.6 ENSMUST00000193793.6 |
||
CDS-3UTR GCA 90 bp | TGTAAACACACTCGGACTAACAGCACAAGACGTGTGAGGAGACAGTTCACAGACGCTGTTTCATTCCTGTaGACTGGTGCAGATATGCCA | + |
Preference number: 4 (lower is better) Translates to: CKHTRTNSTRRVRRQFTDAVSFL*TGADMP Trigger: TGGCATATCTGCACCAGTGCACAGGAATGAAACAGC...GTCTGTGAACTGTCTCCTCACACGTCTTGTGCTGTTAGTCCGAGTGTGTTTACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000167723.8 ENSMUST00000193391.6 ENSMUST00000193793.6 |
||
CDS-3UTR GCA 90 bp | TGTAAACACACTCGGACTAACAGCACAAGACGTGTGAGGAGACAGTTCACAGACTCCTTCCTGTCTTCTTaGACATTAGGGTCTGAGCTG | + |
Preference number: 4 (lower is better) Translates to: CKHTRTNSTRRVRRQFTDSFLSS*TLGSEL Trigger: CAGCTCAGACCCTAATGTGCAAGAAGACAGGAAGGA...GTCTGTGAACTGTCTCCTCACACGTCTTGTGCTGTTAGTCCGAGTGTGTTTACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000167723.8 ENSMUST00000193391.6 ENSMUST00000193793.6 |
||
CDS-3UTR GCA 90 bp | ACTAACAGCACAAGACGTGTGAGGAGACAGTTCACAGACATGAGACATCAGAAGCACTATACACACTGCTaGCACAGAGGCGAGAACAAG | + |
Preference number: 4 (lower is better) Translates to: TNSTRRVRRQFTDMRHQKHYTHC*HRGENK Trigger: CTTGTTCTCGCCTCTGTGGCAGCAGTGTGTATAGTG...CTTCTGATGTCTCATGTCTGTGAACTGTCTCCTCACACGTCTTGTGCTGTTAGT 48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000167723.8 ENSMUST00000193391.6 |
||
CDS-3UTR GCA 90 bp | CTAATGCTTCAACCCTTTAATACAGTTCTTCACACTGTGGTGAAACCCCCAACCCTTCCTCTCTACCAGTaGTTCGTGGAGTCCACTCTC | + |
Preference number: 4 (lower is better) Translates to: LMLQPFNTVLHTVVKPPTLPLYQ*FVESTL Trigger: GAGAGTGGACTCCACGAAGCACTGGTAGAGAGGAAG...GGTTGGGGGTTTCACCACAGTGTGAAGAACTGTATTAAAGGGTTGAAGCATTAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000087983.8 ENSMUST00000108044.4 ENSMUST00000195684.6 |
||
CDS-3UTR GCA 90 bp | CGAAGCTTGGCTGATAGAAGAACAAAGCGAAGTCTCAAACTCTCCCAACTCTCTTGGCTTGACGGCTTTTaGGGGCATCAGGTAAACAAG | + |
Preference number: 4 (lower is better) Translates to: RSLADRRTKRSLKLSQLSWLDGF*GHQVNK Trigger: CTTGTTTACCTGATGCCCGCAAAAGCCGTCAAGCCA...AGAGAGTTGGGAGAGTTTGAGACTTCGCTTTGTTCTTCTATCAGCCAAGCTTCG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000087983.8 ENSMUST00000108044.4 ENSMUST00000195684.6 |
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CDS-3UTR CCA 90 bp | GTGTGTGTGTGTGTGTGTGTGTGTGTAAACACACTCGGACTAACAGCACAAGACTTCATTCCTGTGCACTaGTGCAGATATGCCACATGG | + |
Preference number: 4 (lower is better) Translates to: VCVCVCVCVNTLGLTAQDFIPVH*CRYATW Trigger: CCATGTGGCATATCTGCACCAGTGCACAGGAATGAA...GTCTTGTGCTGTTAGTCCGAGTGTGTTTACACACACACACACACACACACACAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000167723.8 ENSMUST00000193391.6 ENSMUST00000193793.6 |
||
CDS-3UTR CCA 90 bp | GACTTCCCTAGAATATTCTTGCTTCACTCAGGCACTTGGCTGAATGGAACGGTACGTGTCCCATTATGGTaGACAGAAAACACGCAGGAG | + |
Preference number: 4 (lower is better) Translates to: DFPRIFLLHSGTWLNGTVRVPLW*TENTQE Trigger: CTCCTGCGTGTTTTCTGTCCACCATAATGGGACACG...TACCGTTCCATTCAGCCAAGTGCCTGAGTGAAGCAAGAATATTCTAGGGAAGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087983.8 |
||
CDS-3UTR CCA 90 bp | TGTGTGTGTGTGTGTGTGTGTGTGTGTAAACACACTCGGACTAACAGCACAAGACGTGTCCCATTATGGTaGACAGAAAACACGCAGGAG | + |
Preference number: 4 (lower is better) Translates to: CVCVCVCVCKHTRTNSTRRVPLW*TENTQE Trigger: CTCCTGCGTGTTTTCTGTCCACCATAATGGGACACG...TCTTGTGCTGTTAGTCCGAGTGTGTTTACACACACACACACACACACACACACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000167723.8 ENSMUST00000193391.6 ENSMUST00000193793.6 |
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CDS-3UTR CCA 90 bp | GAAGCTTGGCTGATAGAAGAACAAAGCGAAGTCTCAAACTCTCCCAACTCTCTTAGCTCTTGGTGTCTATaGCTTCTTCGTTGGCCACGG | + |
Preference number: 4 (lower is better) Translates to: EAWLIEEQSEVSNSPNSLSSWCL*LLRWPR Trigger: CCGTGGCCAACGAAGAAGCCATAGACACCAAGAGCT...AAGAGAGTTGGGAGAGTTTGAGACTTCGCTTTGTTCTTCTATCAGCCAAGCTTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000087983.8 ENSMUST00000108044.4 ENSMUST00000195684.6 |
||
CDS-3UTR CCA 90 bp | GAAGCTTGGCTGATAGAAGAACAAAGCGAAGTCTCAAACTCTCCCAACTCTCTTGTTTCTCCAGGACCCTaGGTAACGTCTCCACAGCAA | + |
Preference number: 4 (lower is better) Translates to: EAWLIEEQSEVSNSPNSLVSPGP*VTSPQQ Trigger: TTGCTGTGGAGACGTTACCCAGGGTCCTGGAGAAAC...AAGAGAGTTGGGAGAGTTTGAGACTTCGCTTTGTTCTTCTATCAGCCAAGCTTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000087983.8 ENSMUST00000108044.4 ENSMUST00000195684.6 |
||
CDS-3UTR CCA 90 bp | TTGGAGATAAAGGTTTGCCAAAGGGGCCACAACCCACAGGTTGGGAATCACTGCTTCTCTATCAGTGAATaGATCTCCTCGACAACAGCT | + |
Preference number: 4 (lower is better) Translates to: LEIKVCQRGHNPQVGNHCFSISE*ISSTTA Trigger: AGCTGTTGTCGAGGAGATCCATTCACTGATAGAGAA...GCAGTGATTCCCAACCTGTGGGTTGTGGCCCCTTTGGCAAACCTTTATCTCCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000087983.8 ENSMUST00000108044.4 ENSMUST00000195684.6 |
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CDS-3UTR CCA 90 bp | GAAGCTTGGCTGATAGAAGAACAAAGCGAAGTCTCAAACTCTCCCAACTCTCTTAGAACCTTGAGTTCATaGAGGGACTGTCAGCCCTCC | + |
Preference number: 4 (lower is better) Translates to: EAWLIEEQSEVSNSPNSLRTLSS*RDCQPS Trigger: GGAGGGCTGACAGTCCCTCCATGAACTCAAGGTTCT...AAGAGAGTTGGGAGAGTTTGAGACTTCGCTTTGTTCTTCTATCAGCCAAGCTTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000087983.8 ENSMUST00000108044.4 ENSMUST00000195684.6 |
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CDS-3UTR TCA 90 bp | TACATCTATTTTGGAGATAAAGGTTTGCCAAAGGGGCCACAACCCACAGGTTGGTGTGATCATGAAAAGTaGCTCTGGGCGAGCTTCTGT | + |
Preference number: 4 (lower is better) Translates to: YIYFGDKGLPKGPQPTGWCDHEK*LWASFC Trigger: ACAGAAGCTCGCCCAGAGTCACTTTTCATGATCACA...CCAACCTGTGGGTTGTGGCCCCTTTGGCAAACCTTTATCTCCAAAATAGATGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000087983.8 ENSMUST00000108044.4 ENSMUST00000195684.6 |
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CDS-3UTR TCA 90 bp | ACTAACAGCACAAGACGTGTGAGGAGACAGTTCACAGACATGAGACATCAGAAGTGTGATCATGAAAAGTaGCTCTGGGCGAGCTTCTGT | + |
Preference number: 4 (lower is better) Translates to: TNSTRRVRRQFTDMRHQKCDHEK*LWASFC Trigger: ACAGAAGCTCGCCCAGAGTCACTTTTCATGATCACA...CTTCTGATGTCTCATGTCTGTGAACTGTCTCCTCACACGTCTTGTGCTGTTAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000167723.8 ENSMUST00000193391.6 ENSMUST00000193793.6 |
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CDS-3UTR TCA 90 bp | TTCAGCACAGTCTCTGCTCTAGACTTCCCTAGAATATTCTTGCTTCACTCAGGCTTGCACATTAGGGTCTaGGCTGTCCTCTTTCCTGAT | + |
Preference number: 4 (lower is better) Translates to: FSTVSALDFPRIFLLHSGLHIRV*AVLFPD Trigger: ATCAGGAAAGAGGACAGCTCAGACCCTAATGTGCAA...GCCTGAGTGAAGCAAGAATATTCTAGGGAAGTCTAGAGCAGAGACTGTGCTGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000087983.8 ENSMUST00000108044.4 ENSMUST00000195684.6 |
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CDS-3UTR TCA 90 bp | ATGCATATTTCAGCAGGAGGTGTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTGCACATTAGGGTCTaGGCTGTCCTCTTTCCTGAT | + |
Preference number: 4 (lower is better) Translates to: MHISAGGVVCVCVCVCVCLHIRV*AVLFPD Trigger: ATCAGGAAAGAGGACAGCTCAGACCCTAATGTGCAA...ACACACACACACACACACACACACACACACAACACCTCCTGCTGAAATATGCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108044.4 |
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CDS-3UTR TCA 90 bp | CGAAGCTTGGCTGATAGAAGAACAAAGCGAAGTCTCAAACTCTCCCAACTCTCTTTGCACATTAGGGTCTaGGCTGTCCTCTTTCCTGAT | + |
Preference number: 4 (lower is better) Translates to: RSLADRRTKRSLKLSQLSLHIRV*AVLFPD Trigger: ATCAGGAAAGAGGACAGCTCAGACCCTAATGTGCAA...AGAGAGTTGGGAGAGTTTGAGACTTCGCTTTGTTCTTCTATCAGCCAAGCTTCG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000087983.8 ENSMUST00000108044.4 ENSMUST00000195684.6 |
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CDS-3UTR GCA 90 bp | GACTTCCCTAGAATATTCTTGCTTCACTCAGGCACTTGGCTGAATGGAACGGTAATTCCTGTGCACTGGTaGAGATATGCCACATGGCTT | + |
Preference number: 4 (lower is better) Translates to: DFPRIFLLHSGTWLNGTVIPVHW*RYATWL Trigger: AAGCCATGTGGCATATCTGCACCAGTGCACAGGAAT...TACCGTTCCATTCAGCCAAGTGCCTGAGTGAAGCAAGAATATTCTAGGGAAGTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087983.8 |
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CDS-3UTR GCA 90 bp | AGCACAAGACGTGTGAGGAGACAGTTCACAGACATGAGACATCAGAAGAAACACGCTGTTTCATTCCTGTaGACTGGTGCAGATATGCCA | + |
Preference number: 4 (lower is better) Translates to: STRRVRRQFTDMRHQKKHAVSFL*TGADMP Trigger: TGGCATATCTGCACCAGTGCACAGGAATGAAACAGC...GTGTTTCTTCTGATGTCTCATGTCTGTGAACTGTCTCCTCACACGTCTTGTGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000167723.8 ENSMUST00000193391.6 ENSMUST00000193793.6 |
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CDS-3UTR GCA 90 bp | TGTGTGTGTGTGTGTGTGTGTGTGTGTAAACACACTCGGACTAACAGCACAAGATCCTTCCTGTCTTCTTaGACATTAGGGTCTGAGCTG | + |
Preference number: 4 (lower is better) Translates to: CVCVCVCVCKHTRTNSTRSFLSS*TLGSEL Trigger: CAGCTCAGACCCTAATGTGCAAGAAGACAGGAAGGA...TCTTGTGCTGTTAGTCCGAGTGTGTTTACACACACACACACACACACACACACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000167723.8 ENSMUST00000193391.6 ENSMUST00000193793.6 |
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CDS-3UTR GCA 90 bp | GGCCAGCGGTTCTCAACCTTCCTAATGCTTCAACCCTTTAATACAGTTCTTCACTCCTTCCTGTCTTCTTaGACATTAGGGTCTGAGCTG | + |
Preference number: 4 (lower is better) Translates to: GQRFSTFLMLQPFNTVLHSFLSS*TLGSEL Trigger: CAGCTCAGACCCTAATGTGCAAGAAGACAGGAAGGA...GTGAAGAACTGTATTAAAGGGTTGAAGCATTAGGAAGGTTGAGAACCGCTGGCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000087983.8 ENSMUST00000108044.4 ENSMUST00000195684.6 |
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CDS-3UTR GCA 90 bp | ATGTGTCGAAGCTTGGCTGATAGAAGAACAAAGCGAAGTCTCAAACTCTCCCAACACTATACACACTGCTaGCACAGAGGCGAGAACAAG | + |
Preference number: 4 (lower is better) Translates to: MCRSLADRRTKRSLKLSQHYTHC*HRGENK Trigger: CTTGTTCTCGCCTCTGTGGCAGCAGTGTGTATAGTG...TTGGGAGAGTTTGAGACTTCGCTTTGTTCTTCTATCAGCCAAGCTTCGACACAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000087983.8 ENSMUST00000108044.4 ENSMUST00000195684.6 |
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CDS-3UTR GCA 90 bp | ACCTTCCTAATGCTTCAACCCTTTAATACAGTTCTTCACACTGTGGTGAAACCCCTTCCTCTCTACCAGTaGTTCGTGGAGTCCACTCTC | + |
Preference number: 4 (lower is better) Translates to: TFLMLQPFNTVLHTVVKPLPLYQ*FVESTL Trigger: GAGAGTGGACTCCACGAAGCACTGGTAGAGAGGAAG...GGGTTTCACCACAGTGTGAAGAACTGTATTAAAGGGTTGAAGCATTAGGAAGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000087983.8 ENSMUST00000108044.4 ENSMUST00000195684.6 |
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CDS-3UTR GCA 90 bp | CTGTGTTTGTTCAGCACAGTCTCTGCTCTAGACTTCCCTAGAATATTCTTGCTTCTTCCTCTCTACCAGTaGTTCGTGGAGTCCACTCTC | + |
Preference number: 4 (lower is better) Translates to: LCLFSTVSALDFPRIFLLLPLYQ*FVESTL Trigger: GAGAGTGGACTCCACGAAGCACTGGTAGAGAGGAAG...AAGCAAGAATATTCTAGGGAAGTCTAGAGCAGAGACTGTGCTGAACAAACACAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000087983.8 ENSMUST00000108044.4 ENSMUST00000195684.6 |
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CDS-3UTR CCA 90 bp | TACATCTATTTTGGAGATAAAGGTTTGCCAAAGGGGCCACAACCCACAGGTTGGTTCATTCCTGTGCACTaGTGCAGATATGCCACATGG | + |
Preference number: 4 (lower is better) Translates to: YIYFGDKGLPKGPQPTGWFIPVH*CRYATW Trigger: CCATGTGGCATATCTGCACCAGTGCACAGGAATGAA...CCAACCTGTGGGTTGTGGCCCCTTTGGCAAACCTTTATCTCCAAAATAGATGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000087983.8 ENSMUST00000108044.4 ENSMUST00000195684.6 |
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CDS-3UTR CCA 90 bp | TTCAGCACAGTCTCTGCTCTAGACTTCCCTAGAATATTCTTGCTTCACTCAGGCATCCTCCATCTCAACTaGCCAGAATTCCAAGGTGTG | + |
Preference number: 4 (lower is better) Translates to: FSTVSALDFPRIFLLHSGILHLN*PEFQGV Trigger: CACACCTTGGAATTCTGGCCAGTTGAGATGGAGGAT...GCCTGAGTGAAGCAAGAATATTCTAGGGAAGTCTAGAGCAGAGACTGTGCTGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000087983.8 ENSMUST00000108044.4 ENSMUST00000195684.6 |
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CDS-3UTR CCA 90 bp | CACACCAAAACTGCCTGCATGCCCAGGGCACCAGAATTGGCTCATAAAAACAGCGGATCCTTGGGGTTTTaGATATTTCCTTACAGTTCT | + |
Preference number: 4 (lower is better) Translates to: HTKTACMPRAPELAHKNSGSLGF*IFPYSS Trigger: AGAACTGTAAGGAAATATCCAAAACCCCAAGGATCC...GCTGTTTTTATGAGCCAATTCTGGTGCCCTGGGCATGCAGGCAGTTTTGGTGTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000108044.4 |
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CDS-3UTR CCA 90 bp | GGCGAGAACAAGCACAGTTACTCCTCCTGTAAAGACATGGCCTGGGATATCAGGGGATCCTTGGGGTTTTaGATATTTCCTTACAGTTCT | + |
Preference number: 4 (lower is better) Translates to: GENKHSYSSCKDMAWDIRGSLGF*IFPYSS Trigger: AGAACTGTAAGGAAATATCCAAAACCCCAAGGATCC...CCTGATATCCCAGGCCATGTCTTTACAGGAGGAGTAACTGTGCTTGTTCTCGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000193793.6 |
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CDS-3UTR CCA 90 bp | ACTAACAGCACAAGACGTGTGAGGAGACAGTTCACAGACATGAGACATCAGAAGTACCGTGTCCCATTATaGTGGACAGAAAACACGCAG | + |
Preference number: 4 (lower is better) Translates to: TNSTRRVRRQFTDMRHQKYRVPL*WTENTQ Trigger: CTGCGTGTTTTCTGTCCACCATAATGGGACACGGTA...CTTCTGATGTCTCATGTCTGTGAACTGTCTCCTCACACGTCTTGTGCTGTTAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000167723.8 ENSMUST00000193391.6 ENSMUST00000193793.6 |
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CDS-3UTR CCA 90 bp | GAACGAGGCTCAGAGATCATTAGTGGGATCATTCAAATAAAAGGAAGACCAGTGAGCTCTTGGTGTCTATaGCTTCTTCGTTGGCCACGG | + |
Preference number: 4 (lower is better) Translates to: ERGSEIISGIIQIKGRPVSSWCL*LLRWPR Trigger: CCGTGGCCAACGAAGAAGCCATAGACACCAAGAGCT...CACTGGTCTTCCTTTTATTTGAATGATCCCACTAATGATCTCTGAGCCTCGTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000167723.8 ENSMUST00000193391.6 |
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CDS-3UTR CCA 90 bp | ACCTTCCTAATGCTTCAACCCTTTAATACAGTTCTTCACACTGTGGTGAAACCCGTTTCTCCAGGACCCTaGGTAACGTCTCCACAGCAA | + |
Preference number: 4 (lower is better) Translates to: TFLMLQPFNTVLHTVVKPVSPGP*VTSPQQ Trigger: TTGCTGTGGAGACGTTACCCAGGGTCCTGGAGAAAC...GGGTTTCACCACAGTGTGAAGAACTGTATTAAAGGGTTGAAGCATTAGGAAGGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000087983.8 ENSMUST00000108044.4 ENSMUST00000195684.6 |
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3UTR CAA 72 bp | AGCACAGTCTCTGCTCTAGACTTCCCTAGAATATTCTaGCTTCACTCAGGCACTTGGCTGAATGGAACGGTA | + |
Preference number: 4 (lower is better) Translates to: STVSALDFPRIF*LHSGTWLNGTV Trigger: TACCGTTCCATTCAGCCAAGTGCCTGAGTGAAGCAAGAATATTCTAGGGAAGTCTAGAGCAGAGACTGTGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087983.8 |
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3UTR CAA 72 bp | TCCAGAGCTCACAAAATCCAAGATTGTCCATCAAATTaGGCTGCACATACCACACCGTCAACTGCCACACCA | + |
Preference number: 4 (lower is better) Translates to: SRAHKIQDCPSN*AAHTTPSTATP Trigger: TGGTGTGGCAGTTGACGGTGTGGTATGTGCAGCCAAATTTGATGGACAATCTTGGATTTTGTGAGCTCTGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108044.4 |
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3UTR CAA 72 bp | AGCACAGTCTCTGCTCTAGACTTCCCTAGAATATTCTaGCTTCACTCAGGCACTTGCAAGGTCACAAGAAGC | + |
Preference number: 4 (lower is better) Translates to: STVSALDFPRIF*LHSGTCKVTRS Trigger: GCTTCTTGTGACCTTGCAAGTGCCTGAGTGAAGCAAGAATATTCTAGGGAAGTCTAGAGCAGAGACTGTGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108044.4 ENSMUST00000195684.6 |
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CDS-3UTR TCA 90 bp | ATGTGTCGAAGCTTGGCTGATAGAAGAACAAAGCGAAGTCTCAAACTCTCCCAATGTGATCATGAAAAGTaGCTCTGGGCGAGCTTCTGT | + |
Preference number: 4 (lower is better) Translates to: MCRSLADRRTKRSLKLSQCDHEK*LWASFC Trigger: ACAGAAGCTCGCCCAGAGTCACTTTTCATGATCACA...TTGGGAGAGTTTGAGACTTCGCTTTGTTCTTCTATCAGCCAAGCTTCGACACAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000087983.8 ENSMUST00000108044.4 ENSMUST00000195684.6 |
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CDS-3UTR TCA 90 bp | ACAAGACGTGTGAGGAGACAGTTCACAGACATGAGACATCAGAAGAAACACATCTGTGATCATGAAAAGTaGCTCTGGGCGAGCTTCTGT | + |
Preference number: 4 (lower is better) Translates to: TRRVRRQFTDMRHQKKHICDHEK*LWASFC Trigger: ACAGAAGCTCGCCCAGAGTCACTTTTCATGATCACA...GATGTGTTTCTTCTGATGTCTCATGTCTGTGAACTGTCTCCTCACACGTCTTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000167723.8 ENSMUST00000193391.6 ENSMUST00000193793.6 |
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CDS-3UTR TCA 90 bp | TTGGAGATAAAGGTTTGCCAAAGGGGCCACAACCCACAGGTTGGGAATCACTGCGTTTGTTTCTTTTGGTaGCATTTAAGGTCCAATTGC | + |
Preference number: 4 (lower is better) Translates to: LEIKVCQRGHNPQVGNHCVCFFW*HLRSNC Trigger: GCAATTGGACCTTAAATGTCACCAAAAGAAACAAAC...GCAGTGATTCCCAACCTGTGGGTTGTGGCCCCTTTGGCAAACCTTTATCTCCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000087983.8 ENSMUST00000108044.4 ENSMUST00000195684.6 |
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CDS-3UTR TCA 90 bp | AAAAGGAAGACCAGTGTTTCTTTCCTTTGCTGGGTGCAGGCACAAAAACATGAGTTGCACATTAGGGTCTaGGCTGTCCTCTTTCCTGAT | + |
Preference number: 4 (lower is better) Translates to: KRKTSVSFLCWVQAQKHELHIRV*AVLFPD Trigger: ATCAGGAAAGAGGACAGCTCAGACCCTAATGTGCAA...CTCATGTTTTTGTGCCTGCACCCAGCAAAGGAAAGAAACACTGGTCTTCCTTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000167723.8 ENSMUST00000193391.6 ENSMUST00000193793.6 |
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CDS-3UTR TCA 90 bp | TTGGAGATAAAGGTTTGCCAAAGGGGCCACAACCCACAGGTTGGGAATCACTGCAAATCTCAGTATTTTTaGAGCATGCAGTTTGCCTTC | + |
Preference number: 4 (lower is better) Translates to: LEIKVCQRGHNPQVGNHCKSQYF*SMQFAF Trigger: GAAGGCAAACTGCATGCTTCAAAAATACTGAGATTT...GCAGTGATTCCCAACCTGTGGGTTGTGGCCCCTTTGGCAAACCTTTATCTCCAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000087983.8 ENSMUST00000108044.4 ENSMUST00000195684.6 |
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CDS-3UTR TCA 90 bp | TACATCTATTTTGGAGATAAAGGTTTGCCAAAGGGGCCACAACCCACAGGTTGGGCTTTTCTCTATCAGTaGATGGATCTCCTCGACAAC | + |
Preference number: 4 (lower is better) Translates to: YIYFGDKGLPKGPQPTGWAFLYQ*MDLLDN Trigger: GTTGTCGAGGAGATCCATTCACTGATAGAGAAAAGC...CCAACCTGTGGGTTGTGGCCCCTTTGGCAAACCTTTATCTCCAAAATAGATGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000087983.8 ENSMUST00000108044.4 ENSMUST00000195684.6 |
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CDS-3UTR TCA 90 bp | ATGTGTCGAAGCTTGGCTGATAGAAGAACAAAGCGAAGTCTCAAACTCTCCCAAATTCTTCCAGAACCTTaGGTTCATGGAGGGACTGTC | + |
Preference number: 4 (lower is better) Translates to: MCRSLADRRTKRSLKLSQILPEP*VHGGTV Trigger: GACAGTCCCTCCATGAACTCAAGGTTCTGGAAGAAT...TTGGGAGAGTTTGAGACTTCGCTTTGTTCTTCTATCAGCCAAGCTTCGACACAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000087983.8 ENSMUST00000108044.4 ENSMUST00000195684.6 |
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CDS-3UTR GCA 90 bp | AGCACAAGACGTGTGAGGAGACAGTTCACAGACATGAGACATCAGAAGAAACACGCACTGGTGCAGATATaGCACATGGCTTCAGATAAA | + |
Preference number: 4 (lower is better) Translates to: STRRVRRQFTDMRHQKKHALVQI*HMASDK Trigger: TTTATCTGAAGCCATGTGGCATATCTGCACCAGTGC...GTGTTTCTTCTGATGTCTCATGTCTGTGAACTGTCTCCTCACACGTCTTGTGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000167723.8 ENSMUST00000193391.6 ENSMUST00000193793.6 |
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CDS-3UTR GCA 90 bp | ACAAGACGTGTGAGGAGACAGTTCACAGACATGAGACATCAGAAGAAACACATCATTCCTGTGCACTGGTaGAGATATGCCACATGGCTT | + |
Preference number: 4 (lower is better) Translates to: TRRVRRQFTDMRHQKKHIIPVHW*RYATWL Trigger: AAGCCATGTGGCATATCTGCACCAGTGCACAGGAAT...GATGTGTTTCTTCTGATGTCTCATGTCTGTGAACTGTCTCCTCACACGTCTTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000167723.8 ENSMUST00000193391.6 ENSMUST00000193793.6 |
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CDS-3UTR GCA 90 bp | CTAATGCTTCAACCCTTTAATACAGTTCTTCACACTGTGGTGAAACCCCCAACCGCTGTTTCATTCCTGTaGACTGGTGCAGATATGCCA | + |
Preference number: 4 (lower is better) Translates to: LMLQPFNTVLHTVVKPPTAVSFL*TGADMP Trigger: TGGCATATCTGCACCAGTGCACAGGAATGAAACAGC...GGTTGGGGGTTTCACCACAGTGTGAAGAACTGTATTAAAGGGTTGAAGCATTAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000087983.8 ENSMUST00000108044.4 ENSMUST00000195684.6 |
||
CDS-3UTR GCA 90 bp | ATGTGTCGAAGCTTGGCTGATAGAAGAACAAAGCGAAGTCTCAAACTCTCCCAATCCTTCCTGTCTTCTTaGACATTAGGGTCTGAGCTG | + |
Preference number: 4 (lower is better) Translates to: MCRSLADRRTKRSLKLSQSFLSS*TLGSEL Trigger: CAGCTCAGACCCTAATGTGCAAGAAGACAGGAAGGA...TTGGGAGAGTTTGAGACTTCGCTTTGTTCTTCTATCAGCCAAGCTTCGACACAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000087983.8 ENSMUST00000108044.4 ENSMUST00000195684.6 |
||
CDS-3UTR GCA 90 bp | CTGTGTTTGTTCAGCACAGTCTCTGCTCTAGACTTCCCTAGAATATTCTTGCTTCACTATACACACTGCTaGCACAGAGGCGAGAACAAG | + |
Preference number: 4 (lower is better) Translates to: LCLFSTVSALDFPRIFLLHYTHC*HRGENK Trigger: CTTGTTCTCGCCTCTGTGGCAGCAGTGTGTATAGTG...AAGCAAGAATATTCTAGGGAAGTCTAGAGCAGAGACTGTGCTGAACAAACACAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000087983.8 ENSMUST00000108044.4 ENSMUST00000195684.6 |
||
CDS-3UTR GCA 90 bp | CTGTGTTTGTTCAGCACAGTCTCTGCTCTAGACTTCCCTAGAATATTCTTGCTTTGGCTTGACGGCTTTTaGGGGCATCAGGTAAACAAG | + |
Preference number: 4 (lower is better) Translates to: LCLFSTVSALDFPRIFLLWLDGF*GHQVNK Trigger: CTTGTTTACCTGATGCCCGCAAAAGCCGTCAAGCCA...AAGCAAGAATATTCTAGGGAAGTCTAGAGCAGAGACTGTGCTGAACAAACACAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000087983.8 ENSMUST00000108044.4 ENSMUST00000195684.6 |
||
CDS-3UTR CCA 90 bp | ACTCCAGGCTGGGAACGAGGCTCAGAGATCATTAGTGGGATCATTCAAATAAAAATCCTCCATCTCAACTaGCCAGAATTCCAAGGTGTG | + |
Preference number: 4 (lower is better) Translates to: TPGWERGSEIISGIIQIKILHLN*PEFQGV Trigger: CACACCTTGGAATTCTGGCCAGTTGAGATGGAGGAT...TTTTATTTGAATGATCCCACTAATGATCTCTGAGCCTCGTTCCCAGCCTGGAGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000167723.8 ENSMUST00000193391.6 ENSMUST00000193793.6 |
||
CDS-3UTR CCA 90 bp | AATCTACTGTGTTTGTTCAGCACAGTCTCTGCTCTAGACTTCCCTAGAATATTCAGCTCTTGGTGTCTATaGCTTCTTCGTTGGCCACGG | + |
Preference number: 4 (lower is better) Translates to: NLLCLFSTVSALDFPRIFSSWCL*LLRWPR Trigger: CCGTGGCCAACGAAGAAGCCATAGACACCAAGAGCT...GAATATTCTAGGGAAGTCTAGAGCAGAGACTGTGCTGAACAAACACAGTAGATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000087983.8 ENSMUST00000108044.4 ENSMUST00000195684.6 |
||
CDS-3UTR TCA 90 bp | TGGGAACGAGGCTCAGAGATCATTAGTGGGATCATTCAAATAAAAGGAAGACCATGTGATCATGAAAAGTaGCTCTGGGCGAGCTTCTGT | + |
Preference number: 4 (lower is better) Translates to: WERGSEIISGIIQIKGRPCDHEK*LWASFC Trigger: ACAGAAGCTCGCCCAGAGTCACTTTTCATGATCACA...TGGTCTTCCTTTTATTTGAATGATCCCACTAATGATCTCTGAGCCTCGTTCCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000167723.8 ENSMUST00000193391.6 ENSMUST00000193793.6 |
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CDS-3UTR TCA 90 bp | GAAGCTTGGCTGATAGAAGAACAAAGCGAAGTCTCAAACTCTCCCAACTCTCTTGCTTTTCTCTATCAGTaGATGGATCTCCTCGACAAC | + |
Preference number: 4 (lower is better) Translates to: EAWLIEEQSEVSNSPNSLAFLYQ*MDLLDN Trigger: GTTGTCGAGGAGATCCATTCACTGATAGAGAAAAGC...AAGAGAGTTGGGAGAGTTTGAGACTTCGCTTTGTTCTTCTATCAGCCAAGCTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000087983.8 ENSMUST00000108044.4 ENSMUST00000195684.6 |
||
CDS-3UTR GCA 90 bp | ACAAGACGTGTGAGGAGACAGTTCACAGACATGAGACATCAGAAGAAACACATCGCACTGGTGCAGATATaGCACATGGCTTCAGATAAA | + |
Preference number: 4 (lower is better) Translates to: TRRVRRQFTDMRHQKKHIALVQI*HMASDK Trigger: TTTATCTGAAGCCATGTGGCATATCTGCACCAGTGC...GATGTGTTTCTTCTGATGTCTCATGTCTGTGAACTGTCTCCTCACACGTCTTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000167723.8 ENSMUST00000193391.6 ENSMUST00000193793.6 |
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CDS-3UTR GCA 90 bp | ATAAAAGGAAGACCAGTGTTTCTTTCCTTTGCTGGGTGCAGGCACAAAAACATGGCTGTTTCATTCCTGTaGACTGGTGCAGATATGCCA | + |
Preference number: 4 (lower is better) Translates to: IKGRPVFLSFAGCRHKNMAVSFL*TGADMP Trigger: TGGCATATCTGCACCAGTGCACAGGAATGAAACAGC...CATGTTTTTGTGCCTGCACCCAGCAAAGGAAAGAAACACTGGTCTTCCTTTTAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000167723.8 ENSMUST00000193391.6 ENSMUST00000193793.6 |
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CDS-3UTR GCA 90 bp | AAGACCAGTGTTTCTTTCCTTTGCTGGGTGCAGGCACAAAAACATGAGCTAGGGTTGAAGCATGCAGTTTaGCTTCAGAAATCCATGTTG | + |
Preference number: 4 (lower is better) Translates to: KTSVSFLCWVQAQKHELGLKHAV*LQKSML Trigger: CAACATGGATTTCTGAAGGCAAACTGCATGCTTCAA...CCCTAGCTCATGTTTTTGTGCCTGCACCCAGCAAAGGAAAGAAACACTGGTCTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000167723.8 ENSMUST00000193391.6 |
||
CDS-3UTR GCA 90 bp | AATCTACTGTGTTTGTTCAGCACAGTCTCTGCTCTAGACTTCCCTAGAATATTCCACTATACACACTGCTaGCACAGAGGCGAGAACAAG | + |
Preference number: 4 (lower is better) Translates to: NLLCLFSTVSALDFPRIFHYTHC*HRGENK Trigger: CTTGTTCTCGCCTCTGTGGCAGCAGTGTGTATAGTG...GAATATTCTAGGGAAGTCTAGAGCAGAGACTGTGCTGAACAAACACAGTAGATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000087983.8 ENSMUST00000108044.4 ENSMUST00000195684.6 |
||
CDS-3UTR CCA 90 bp | CTGTGTTTGTTCAGCACAGTCTCTGCTCTAGACTTCCCTAGAATATTCTTGCTTTTCATTCCTGTGCACTaGTGCAGATATGCCACATGG | + |
Preference number: 4 (lower is better) Translates to: LCLFSTVSALDFPRIFLLFIPVH*CRYATW Trigger: CCATGTGGCATATCTGCACCAGTGCACAGGAATGAA...AAGCAAGAATATTCTAGGGAAGTCTAGAGCAGAGACTGTGCTGAACAAACACAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000087983.8 ENSMUST00000108044.4 ENSMUST00000195684.6 |
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CDS-3UTR CCA 90 bp | CAGGTTCCATTTCAAAGGATGTACGAAAAGGTTGAAGAAACAAGGAAGTCCTGCTTCATTCCTGTGCACTaGTGCAGATATGCCACATGG | + |
Preference number: 4 (lower is better) Translates to: QVPFQRMYEKVEETRKSCFIPVH*CRYATW Trigger: CCATGTGGCATATCTGCACCAGTGCACAGGAATGAA...GCAGGACTTCCTTGTTTCTTCAACCTTTTCGTACATCCTTTGAAATGGAACCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108044.4 |
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CDS-3UTR CCA 90 bp | ATAAAAGGAAGACCAGTGTTTCTTTCCTTTGCTGGGTGCAGGCACAAAAACATGTTCATTCCTGTGCACTaGTGCAGATATGCCACATGG | + |
Preference number: 4 (lower is better) Translates to: IKGRPVFLSFAGCRHKNMFIPVH*CRYATW Trigger: CCATGTGGCATATCTGCACCAGTGCACAGGAATGAA...CATGTTTTTGTGCCTGCACCCAGCAAAGGAAAGAAACACTGGTCTTCCTTTTAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000167723.8 ENSMUST00000193391.6 ENSMUST00000193793.6 |
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CDS-3UTR CCA 90 bp | TGGGAACGAGGCTCAGAGATCATTAGTGGGATCATTCAAATAAAAGGAAGACCATTCATTCCTGTGCACTaGTGCAGATATGCCACATGG | + |
Preference number: 4 (lower is better) Translates to: WERGSEIISGIIQIKGRPFIPVH*CRYATW Trigger: CCATGTGGCATATCTGCACCAGTGCACAGGAATGAA...TGGTCTTCCTTTTATTTGAATGATCCCACTAATGATCTCTGAGCCTCGTTCCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000167723.8 ENSMUST00000193391.6 ENSMUST00000193793.6 |
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CDS-3UTR CCA 90 bp | CTGTGTTTGTTCAGCACAGTCTCTGCTCTAGACTTCCCTAGAATATTCTTGCTTATCCTCCATCTCAACTaGCCAGAATTCCAAGGTGTG | + |
Preference number: 4 (lower is better) Translates to: LCLFSTVSALDFPRIFLLILHLN*PEFQGV Trigger: CACACCTTGGAATTCTGGCCAGTTGAGATGGAGGAT...AAGCAAGAATATTCTAGGGAAGTCTAGAGCAGAGACTGTGCTGAACAAACACAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000087983.8 ENSMUST00000108044.4 ENSMUST00000195684.6 |
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CDS-3UTR CCA 90 bp | TGTAAACACACTCGGACTAACAGCACAAGACGTGTGAGGAGACAGTTCACAGACGGATCCTTGGGGTTTTaGATATTTCCTTACAGTTCT | + |
Preference number: 4 (lower is better) Translates to: CKHTRTNSTRRVRRQFTDGSLGF*IFPYSS Trigger: AGAACTGTAAGGAAATATCCAAAACCCCAAGGATCC...GTCTGTGAACTGTCTCCTCACACGTCTTGTGCTGTTAGTCCGAGTGTGTTTACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000167723.8 ENSMUST00000193391.6 ENSMUST00000193793.6 |
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CDS-3UTR CCA 90 bp | CCATTTCAAAGGATGTACGAAAAGGTTGAAGAAACAAGGAAGTCCTGCTTGACGTACCGTGTCCCATTATaGTGGACAGAAAACACGCAG | + |
Preference number: 4 (lower is better) Translates to: PFQRMYEKVEETRKSCLTYRVPL*WTENTQ Trigger: CTGCGTGTTTTCTGTCCACCATAATGGGACACGGTA...CGTCAAGCAGGACTTCCTTGTTTCTTCAACCTTTTCGTACATCCTTTGAAATGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108044.4 |
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CDS-3UTR CCA 90 bp | GAACGAGGCTCAGAGATCATTAGTGGGATCATTCAAATAAAAGGAAGACCAGTGTACCGTGTCCCATTATaGTGGACAGAAAACACGCAG | + |
Preference number: 4 (lower is better) Translates to: ERGSEIISGIIQIKGRPVYRVPL*WTENTQ Trigger: CTGCGTGTTTTCTGTCCACCATAATGGGACACGGTA...CACTGGTCTTCCTTTTATTTGAATGATCCCACTAATGATCTCTGAGCCTCGTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000167723.8 ENSMUST00000193391.6 ENSMUST00000193793.6 |
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CDS-3UTR CCA 90 bp | ATATCGCAGGTTCCATTTCAAAGGATGTACGAAAAGGTTGAAGAAACAAGGAAGGTTTCTCCAGGACCCTaGGTAACGTCTCCACAGCAA | + |
Preference number: 4 (lower is better) Translates to: ISQVPFQRMYEKVEETRKVSPGP*VTSPQQ Trigger: TTGCTGTGGAGACGTTACCCAGGGTCCTGGAGAAAC...CTTCCTTGTTTCTTCAACCTTTTCGTACATCCTTTGAAATGGAACCTGCGATAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108044.4 |
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CDS-3UTR CCA 90 bp | CGAAGCTTGGCTGATAGAAGAACAAAGCGAAGTCTCAAACTCTCCCAACTCTCTTTCTCTATCAGTGAATaGATCTCCTCGACAACAGCT | + |
Preference number: 4 (lower is better) Translates to: RSLADRRTKRSLKLSQLSFSISE*ISSTTA Trigger: AGCTGTTGTCGAGGAGATCCATTCACTGATAGAGAA...AGAGAGTTGGGAGAGTTTGAGACTTCGCTTTGTTCTTCTATCAGCCAAGCTTCG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000087983.8 ENSMUST00000108044.4 ENSMUST00000195684.6 |
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CDS-3UTR TCA 90 bp | AAGACCAGTGTTTCTTTCCTTTGCTGGGTGCAGGCACAAAAACATGAGCTAGGGGTTTGTTTCTTTTGGTaGCATTTAAGGTCCAATTGC | + |
Preference number: 4 (lower is better) Translates to: KTSVSFLCWVQAQKHELGVCFFW*HLRSNC Trigger: GCAATTGGACCTTAAATGTCACCAAAAGAAACAAAC...CCCTAGCTCATGTTTTTGTGCCTGCACCCAGCAAAGGAAAGAAACACTGGTCTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000167723.8 ENSMUST00000193391.6 ENSMUST00000193793.6 |
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CDS-3UTR TCA 90 bp | GTGTGTGTGTGTGTGTGTGTGTGTGTAAACACACTCGGACTAACAGCACAAGACGTTTGTTTCTTTTGGTaGCATTTAAGGTCCAATTGC | + |
Preference number: 4 (lower is better) Translates to: VCVCVCVCVNTLGLTAQDVCFFW*HLRSNC Trigger: GCAATTGGACCTTAAATGTCACCAAAAGAAACAAAC...GTCTTGTGCTGTTAGTCCGAGTGTGTTTACACACACACACACACACACACACAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000167723.8 ENSMUST00000193391.6 ENSMUST00000193793.6 |
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CDS-3UTR TCA 90 bp | AGCACAAGACGTGTGAGGAGACAGTTCACAGACATGAGACATCAGAAGAAACACATCGTCTTTATTCAATaGAGCACTGCAGTTCAACTC | + |
Preference number: 4 (lower is better) Translates to: STRRVRRQFTDMRHQKKHIVFIQ*STAVQL Trigger: GAGTTGAACTGCAGTGCTTCATTGAATAAAGACGAT...GTGTTTCTTCTGATGTCTCATGTCTGTGAACTGTCTCCTCACACGTCTTGTGCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000167723.8 ENSMUST00000193391.6 ENSMUST00000193793.6 |
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CDS-3UTR TCA 90 bp | TTCTCAACCTTCCTAATGCTTCAACCCTTTAATACAGTTCTTCACACTGTGGTGATTCTTCCAGAACCTTaGGTTCATGGAGGGACTGTC | + |
Preference number: 4 (lower is better) Translates to: FSTFLMLQPFNTVLHTVVILPEP*VHGGTV Trigger: GACAGTCCCTCCATGAACTCAAGGTTCTGGAAGAAT...CACCACAGTGTGAAGAACTGTATTAAAGGGTTGAAGCATTAGGAAGGTTGAGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000087983.8 ENSMUST00000108044.4 ENSMUST00000195684.6 |
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CDS-3UTR GCA 90 bp | CGAGGCTCAGAGATCATTAGTGGGATCATTCAAATAAAAGGAAGACCAGTGTTTATTCCTGTGCACTGGTaGAGATATGCCACATGGCTT | + |
Preference number: 4 (lower is better) Translates to: RGSEIISGIIQIKGRPVFIPVHW*RYATWL Trigger: AAGCCATGTGGCATATCTGCACCAGTGCACAGGAAT...AAACACTGGTCTTCCTTTTATTTGAATGATCCCACTAATGATCTCTGAGCCTCG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000167723.8 ENSMUST00000193391.6 ENSMUST00000193793.6 |
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CDS-3UTR GCA 90 bp | TTCTCAACCTTCCTAATGCTTCAACCCTTTAATACAGTTCTTCACACTGTGGTGATTCCTGTGCACTGGTaGAGATATGCCACATGGCTT | + |
Preference number: 4 (lower is better) Translates to: FSTFLMLQPFNTVLHTVVIPVHW*RYATWL Trigger: AAGCCATGTGGCATATCTGCACCAGTGCACAGGAAT...CACCACAGTGTGAAGAACTGTATTAAAGGGTTGAAGCATTAGGAAGGTTGAGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000087983.8 ENSMUST00000108044.4 ENSMUST00000195684.6 |
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CDS-3UTR GCA 90 bp | TTCTCAACCTTCCTAATGCTTCAACCCTTTAATACAGTTCTTCACACTGTGGTGTCCTTCCTGTCTTCTTaGACATTAGGGTCTGAGCTG | + |
Preference number: 4 (lower is better) Translates to: FSTFLMLQPFNTVLHTVVSFLSS*TLGSEL Trigger: CAGCTCAGACCCTAATGTGCAAGAAGACAGGAAGGA...CACCACAGTGTGAAGAACTGTATTAAAGGGTTGAAGCATTAGGAAGGTTGAGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000087983.8 ENSMUST00000108044.4 ENSMUST00000195684.6 |
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CDS-3UTR GCA 90 bp | ACAGTCTCTGCTCTAGACTTCCCTAGAATATTCTTGCTTCACTCAGGCACTTGCTTGAAGCATGCAGTTTaGCTTCAGAAATCCATGTTG | + |
Preference number: 4 (lower is better) Translates to: TVSALDFPRIFLLHSGTCLKHAV*LQKSML Trigger: CAACATGGATTTCTGAAGGCAAACTGCATGCTTCAA...GCAAGTGCCTGAGTGAAGCAAGAATATTCTAGGGAAGTCTAGAGCAGAGACTGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108044.4 ENSMUST00000195684.6 |
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CDS-3UTR GCA 90 bp | TTCAGCACAGTCTCTGCTCTAGACTTCCCTAGAATATTCTTGCTTCACTCAGGCTTGAAGCATGCAGTTTaGCTTCAGAAATCCATGTTG | + |
Preference number: 4 (lower is better) Translates to: FSTVSALDFPRIFLLHSGLKHAV*LQKSML Trigger: CAACATGGATTTCTGAAGGCAAACTGCATGCTTCAA...GCCTGAGTGAAGCAAGAATATTCTAGGGAAGTCTAGAGCAGAGACTGTGCTGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000087983.8 ENSMUST00000108044.4 ENSMUST00000195684.6 |
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CDS-3UTR CCA 90 bp | TGTGTGTGTGTGTGTGTGTGTGTGTGTAAACACACTCGGACTAACAGCACAAGATGCAGATATGCCACATaGCTTCAGATAAAAAGGTTC | + |
Preference number: 4 (lower is better) Translates to: CVCVCVCVCKHTRTNSTRCRYAT*LQIKRF Trigger: GAACCTTTTTATCTGAAGCCATGTGGCATATCTGCA...TCTTGTGCTGTTAGTCCGAGTGTGTTTACACACACACACACACACACACACACA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000167723.8 ENSMUST00000193391.6 ENSMUST00000193793.6 |
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CDS-3UTR CCA 90 bp | TTCAGCACAGTCTCTGCTCTAGACTTCCCTAGAATATTCTTGCTTCACTCAGGCGGATCCTTGGGGTTTTaGATATTTCCTTACAGTTCT | + |
Preference number: 4 (lower is better) Translates to: FSTVSALDFPRIFLLHSGGSLGF*IFPYSS Trigger: AGAACTGTAAGGAAATATCCAAAACCCCAAGGATCC...GCCTGAGTGAAGCAAGAATATTCTAGGGAAGTCTAGAGCAGAGACTGTGCTGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000087983.8 ENSMUST00000108044.4 ENSMUST00000195684.6 |
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CDS-3UTR CCA 90 bp | GAGACAGTTCACAGACATGAGACATCAGAAGAAACACATCTGTTTTCTCACAAACGTGTCCCATTATGGTaGACAGAAAACACGCAGGAG | + |
Preference number: 4 (lower is better) Translates to: ETVHRHETSEETHLFSHKRVPLW*TENTQE Trigger: CTCCTGCGTGTTTTCTGTCCACCATAATGGGACACG...TTTGTGAGAAAACAGATGTGTTTCTTCTGATGTCTCATGTCTGTGAACTGTCTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000167723.8 ENSMUST00000193391.6 ENSMUST00000193793.6 |
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CDS-3UTR CCA 90 bp | AATCTACTGTGTTTGTTCAGCACAGTCTCTGCTCTAGACTTCCCTAGAATATTCTACCGTGTCCCATTATaGTGGACAGAAAACACGCAG | + |
Preference number: 4 (lower is better) Translates to: NLLCLFSTVSALDFPRIFYRVPL*WTENTQ Trigger: CTGCGTGTTTTCTGTCCACCATAATGGGACACGGTA...GAATATTCTAGGGAAGTCTAGAGCAGAGACTGTGCTGAACAAACACAGTAGATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000087983.8 ENSMUST00000108044.4 ENSMUST00000195684.6 |
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CDS-3UTR CCA 90 bp | GTCTCTTTCCGCTATGCGCCTATAGAACAGAACCAAGTCAACTTTATAAATGACTACCGTGTCCCATTATaGTGGACAGAAAACACGCAG | + |
Preference number: 4 (lower is better) Translates to: VSFRYAPIEQNQVNFINDYRVPL*WTENTQ Trigger: CTGCGTGTTTTCTGTCCACCATAATGGGACACGGTA...GTCATTTATAAAGTTGACTTGGTTCTGTTCTATAGGCGCATAGCGGAAAGAGAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000193793.6 |
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CDS-3UTR CCA 90 bp | GAAGCTTGGCTGATAGAAGAACAAAGCGAAGTCTCAAACTCTCCCAACTCTCTTTTCTCTATCAGTGAATaGATCTCCTCGACAACAGCT | + |
Preference number: 4 (lower is better) Translates to: EAWLIEEQSEVSNSPNSLFSISE*ISSTTA Trigger: AGCTGTTGTCGAGGAGATCCATTCACTGATAGAGAA...AAGAGAGTTGGGAGAGTTTGAGACTTCGCTTTGTTCTTCTATCAGCCAAGCTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000087983.8 ENSMUST00000108044.4 ENSMUST00000195684.6 |
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CDS-3UTR TCA 90 bp | TACATCTATTTTGGAGATAAAGGTTTGCCAAAGGGGCCACAACCCACAGGTTGGGTTTGTTTCTTTTGGTaGCATTTAAGGTCCAATTGC | + |
Preference number: 4 (lower is better) Translates to: YIYFGDKGLPKGPQPTGWVCFFW*HLRSNC Trigger: GCAATTGGACCTTAAATGTCACCAAAAGAAACAAAC...CCAACCTGTGGGTTGTGGCCCCTTTGGCAAACCTTTATCTCCAAAATAGATGTA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000087983.8 ENSMUST00000108044.4 ENSMUST00000195684.6 |
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CDS-3UTR TCA 90 bp | CTAATGCTTCAACCCTTTAATACAGTTCTTCACACTGTGGTGAAACCCCCAACCATCGTCTTTATTCAATaGAGCACTGCAGTTCAACTC | + |
Preference number: 4 (lower is better) Translates to: LMLQPFNTVLHTVVKPPTIVFIQ*STAVQL Trigger: GAGTTGAACTGCAGTGCTTCATTGAATAAAGACGAT...GGTTGGGGGTTTCACCACAGTGTGAAGAACTGTATTAAAGGGTTGAAGCATTAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000087983.8 ENSMUST00000108044.4 ENSMUST00000195684.6 |
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CDS-3UTR TCA 90 bp | ATGTGTCGAAGCTTGGCTGATAGAAGAACAAAGCGAAGTCTCAAACTCTCCCAAATCGTCTTTATTCAATaGAGCACTGCAGTTCAACTC | + |
Preference number: 4 (lower is better) Translates to: MCRSLADRRTKRSLKLSQIVFIQ*STAVQL Trigger: GAGTTGAACTGCAGTGCTTCATTGAATAAAGACGAT...TTGGGAGAGTTTGAGACTTCGCTTTGTTCTTCTATCAGCCAAGCTTCGACACAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000087983.8 ENSMUST00000108044.4 ENSMUST00000195684.6 |
||
CDS-3UTR TCA 90 bp | GAAGCTTGGCTGATAGAAGAACAAAGCGAAGTCTCAAACTCTCCCAACTCTCTTATCGTCTTTATTCAATaGAGCACTGCAGTTCAACTC | + |
Preference number: 4 (lower is better) Translates to: EAWLIEEQSEVSNSPNSLIVFIQ*STAVQL Trigger: GAGTTGAACTGCAGTGCTTCATTGAATAAAGACGAT...AAGAGAGTTGGGAGAGTTTGAGACTTCGCTTTGTTCTTCTATCAGCCAAGCTTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000087983.8 ENSMUST00000108044.4 ENSMUST00000195684.6 |
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CDS-3UTR TCA 90 bp | GAGACAGTTCACAGACATGAGACATCAGAAGAAACACATCTGTTTTCTCACAAATTGCACATTAGGGTCTaGGCTGTCCTCTTTCCTGAT | + |
Preference number: 4 (lower is better) Translates to: ETVHRHETSEETHLFSHKLHIRV*AVLFPD Trigger: ATCAGGAAAGAGGACAGCTCAGACCCTAATGTGCAA...TTTGTGAGAAAACAGATGTGTTTCTTCTGATGTCTCATGTCTGTGAACTGTCTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000167723.8 ENSMUST00000193391.6 ENSMUST00000193793.6 |
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CDS-3UTR TCA 90 bp | GGCCAGCGGTTCTCAACCTTCCTAATGCTTCAACCCTTTAATACAGTTCTTCACAAATCTCAGTATTTTTaGAGCATGCAGTTTGCCTTC | + |
Preference number: 4 (lower is better) Translates to: GQRFSTFLMLQPFNTVLHKSQYF*SMQFAF Trigger: GAAGGCAAACTGCATGCTTCAAAAATACTGAGATTT...GTGAAGAACTGTATTAAAGGGTTGAAGCATTAGGAAGGTTGAGAACCGCTGGCC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000087983.8 ENSMUST00000108044.4 ENSMUST00000195684.6 |
||
CDS-3UTR TCA 90 bp | AGCACAAGACGTGTGAGGAGACAGTTCACAGACATGAGACATCAGAAGAAACACAAATCTCAGTATTTTTaGAGCATGCAGTTTGCCTTC | + |
Preference number: 4 (lower is better) Translates to: STRRVRRQFTDMRHQKKHKSQYF*SMQFAF Trigger: GAAGGCAAACTGCATGCTTCAAAAATACTGAGATTT...GTGTTTCTTCTGATGTCTCATGTCTGTGAACTGTCTCCTCACACGTCTTGTGCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000167723.8 ENSMUST00000193391.6 |
||
CDS-3UTR GCA 90 bp | AATCTACTGTGTTTGTTCAGCACAGTCTCTGCTCTAGACTTCCCTAGAATATTCGCACTGGTGCAGATATaGCACATGGCTTCAGATAAA | + |
Preference number: 4 (lower is better) Translates to: NLLCLFSTVSALDFPRIFALVQI*HMASDK Trigger: TTTATCTGAAGCCATGTGGCATATCTGCACCAGTGC...GAATATTCTAGGGAAGTCTAGAGCAGAGACTGTGCTGAACAAACACAGTAGATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000087983.8 ENSMUST00000108044.4 ENSMUST00000195684.6 |
||
CDS-3UTR GCA 90 bp | TCAAATAAAAGGAAGACCAGTGTTTCTTTCCTTTGCTGGGTGCAGGCACAAAAAGCACTGGTGCAGATATaGCACATGGCTTCAGATAAA | + |
Preference number: 4 (lower is better) Translates to: SNKRKTSVSFLCWVQAQKALVQI*HMASDK Trigger: TTTATCTGAAGCCATGTGGCATATCTGCACCAGTGC...TTTTTGTGCCTGCACCCAGCAAAGGAAAGAAACACTGGTCTTCCTTTTATTTGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000167723.8 ENSMUST00000193391.6 ENSMUST00000193793.6 |
||
CDS-3UTR GCA 90 bp | ATGTGTCGAAGCTTGGCTGATAGAAGAACAAAGCGAAGTCTCAAACTCTCCCAATTGAAGCATGCAGTTTaGCTTCAGAAATCCATGTTG | + |
Preference number: 4 (lower is better) Translates to: MCRSLADRRTKRSLKLSQLKHAV*LQKSML Trigger: CAACATGGATTTCTGAAGGCAAACTGCATGCTTCAA...TTGGGAGAGTTTGAGACTTCGCTTTGTTCTTCTATCAGCCAAGCTTCGACACAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000087983.8 ENSMUST00000108044.4 ENSMUST00000195684.6 |
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CDS-3UTR CCA 90 bp | CTAATGCTTCAACCCTTTAATACAGTTCTTCACACTGTGGTGAAACCCCCAACCTGCAGATATGCCACATaGCTTCAGATAAAAAGGTTC | + |
Preference number: 4 (lower is better) Translates to: LMLQPFNTVLHTVVKPPTCRYAT*LQIKRF Trigger: GAACCTTTTTATCTGAAGCCATGTGGCATATCTGCA...GGTTGGGGGTTTCACCACAGTGTGAAGAACTGTATTAAAGGGTTGAAGCATTAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000087983.8 ENSMUST00000108044.4 ENSMUST00000195684.6 |
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CDS-3UTR CCA 90 bp | ACAAGACGTGTGAGGAGACAGTTCACAGACATGAGACATCAGAAGAAACACATCTGCAGATATGCCACATaGCTTCAGATAAAAAGGTTC | + |
Preference number: 4 (lower is better) Translates to: TRRVRRQFTDMRHQKKHICRYAT*LQIKRF Trigger: GAACCTTTTTATCTGAAGCCATGTGGCATATCTGCA...GATGTGTTTCTTCTGATGTCTCATGTCTGTGAACTGTCTCCTCACACGTCTTGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000167723.8 ENSMUST00000193391.6 ENSMUST00000193793.6 |
||
CDS-3UTR CCA 90 bp | GTGTCTCGTCTCTTTCCGCTATGCGCCTATAGAACAGAACCAAGTCAACTTTATTGCAGATATGCCACATaGCTTCAGATAAAAAGGTTC | + |
Preference number: 4 (lower is better) Translates to: VSRLFPLCAYRTEPSQLYCRYAT*LQIKRF Trigger: GAACCTTTTTATCTGAAGCCATGTGGCATATCTGCA...ATAAAGTTGACTTGGTTCTGTTCTATAGGCGCATAGCGGAAAGAGACGAGACAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000193793.6 |
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CDS-3UTR CCA 90 bp | TATAAAATAAACTTCATGTGTCGAAGCTTGGCTGATAGAAGAACAAAGCGAAGTAGAACCTTGAGTTCATaGAGGGACTGTCAGCCCTCC | + |
Preference number: 4 (lower is better) Translates to: YKINFMCRSLADRRTKRSRTLSS*RDCQPS Trigger: GGAGGGCTGACAGTCCCTCCATGAACTCAAGGTTCT...ACTTCGCTTTGTTCTTCTATCAGCCAAGCTTCGACACATGAAGTTTATTTTATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000087983.8 ENSMUST00000108044.4 ENSMUST00000195684.6 |
||
3UTR CAA 72 bp | AGTTGGATAAAATTCCAGAGCTCACAAAATCCAAGATaGTCCATCAAATTTGGCTGCACATACCACACCGTC | + |
Preference number: 4 (lower is better) Translates to: SWIKFQSSQNPR*SIKFGCTYHTV Trigger: GACGGTGTGGTATGTGCAGCCAAATTTGATGGACAATCTTGGATTTTGTGAGCTCTGGAATTTTATCCAACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108044.4 |
||
CDS-3UTR TCA 90 bp | CACAAGACGTGTGAGGAGACAGTTCACAGACATGAGACATCAGAAGAAACACATGTTTGTTTCTTTTGGTaGCATTTAAGGTCCAATTGC | + |
Preference number: 4 (lower is better) Translates to: HKTCEETVHRHETSEETHVCFFW*HLRSNC Trigger: GCAATTGGACCTTAAATGTCACCAAAAGAAACAAAC...ATGTGTTTCTTCTGATGTCTCATGTCTGTGAACTGTCTCCTCACACGTCTTGTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000167723.8 ENSMUST00000193391.6 ENSMUST00000193793.6 |
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CDS-3UTR TCA 90 bp | ACTCCAGGCTGGGAACGAGGCTCAGAGATCATTAGTGGGATCATTCAAATAAAAAAATCTCAGTATTTTTaGAGCATGCAGTTTGCCTTC | + |
Preference number: 4 (lower is better) Translates to: TPGWERGSEIISGIIQIKKSQYF*SMQFAF Trigger: GAAGGCAAACTGCATGCTTCAAAAATACTGAGATTT...TTTTATTTGAATGATCCCACTAATGATCTCTGAGCCTCGTTCCCAGCCTGGAGT 41% GC, longest homopolymer 7 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000167723.8 ENSMUST00000193391.6 |
||
CDS-3UTR GCA 90 bp | ATATCGCAGGTTCCATTTCAAAGGATGTACGAAAAGGTTGAAGAAACAAGGAAGGCACTGGTGCAGATATaGCACATGGCTTCAGATAAA | + |
Preference number: 4 (lower is better) Translates to: ISQVPFQRMYEKVEETRKALVQI*HMASDK Trigger: TTTATCTGAAGCCATGTGGCATATCTGCACCAGTGC...CTTCCTTGTTTCTTCAACCTTTTCGTACATCCTTTGAAATGGAACCTGCGATAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108044.4 |
||
CDS-3UTR GCA 90 bp | TATAAAATAAACTTCATGTGTCGAAGCTTGGCTGATAGAAGAACAAAGCGAAGTTGGCTTGACGGCTTTTaGGGGCATCAGGTAAACAAG | + |
Preference number: 4 (lower is better) Translates to: YKINFMCRSLADRRTKRSWLDGF*GHQVNK Trigger: CTTGTTTACCTGATGCCCGCAAAAGCCGTCAAGCCA...ACTTCGCTTTGTTCTTCTATCAGCCAAGCTTCGACACATGAAGTTTATTTTATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000087983.8 ENSMUST00000108044.4 ENSMUST00000195684.6 |
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CDS-3UTR CCA 90 bp | TCAGAGATCATTAGTGGGATCATTCAAATAAAAGGAAGACCAGTGTTTCTTTCCATCCTCCATCTCAACTaGCCAGAATTCCAAGGTGTG | + |
Preference number: 4 (lower is better) Translates to: SEIISGIIQIKGRPVFLSILHLN*PEFQGV Trigger: CACACCTTGGAATTCTGGCCAGTTGAGATGGAGGAT...GGAAAGAAACACTGGTCTTCCTTTTATTTGAATGATCCCACTAATGATCTCTGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000167723.8 ENSMUST00000193391.6 ENSMUST00000193793.6 |
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CDS-3UTR TCA 90 bp | ACCTTCCTAATGCTTCAACCCTTTAATACAGTTCTTCACACTGTGGTGAAACCCGTTTGTTTCTTTTGGTaGCATTTAAGGTCCAATTGC | + |
Preference number: 4 (lower is better) Translates to: TFLMLQPFNTVLHTVVKPVCFFW*HLRSNC Trigger: GCAATTGGACCTTAAATGTCACCAAAAGAAACAAAC...GGGTTTCACCACAGTGTGAAGAACTGTATTAAAGGGTTGAAGCATTAGGAAGGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000087983.8 ENSMUST00000108044.4 ENSMUST00000195684.6 |
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CDS-3UTR GCA 90 bp | TATAAAATAAACTTCATGTGTCGAAGCTTGGCTGATAGAAGAACAAAGCGAAGTATTCCTGTGCACTGGTaGAGATATGCCACATGGCTT | + |
Preference number: 4 (lower is better) Translates to: YKINFMCRSLADRRTKRSIPVHW*RYATWL Trigger: AAGCCATGTGGCATATCTGCACCAGTGCACAGGAAT...ACTTCGCTTTGTTCTTCTATCAGCCAAGCTTCGACACATGAAGTTTATTTTATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000087983.8 ENSMUST00000108044.4 ENSMUST00000195684.6 |
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CDS-3UTR GCA 90 bp | TATAAAATAAACTTCATGTGTCGAAGCTTGGCTGATAGAAGAACAAAGCGAAGTGCTGTTTCATTCCTGTaGACTGGTGCAGATATGCCA | + |
Preference number: 4 (lower is better) Translates to: YKINFMCRSLADRRTKRSAVSFL*TGADMP Trigger: TGGCATATCTGCACCAGTGCACAGGAATGAAACAGC...ACTTCGCTTTGTTCTTCTATCAGCCAAGCTTCGACACATGAAGTTTATTTTATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000087983.8 ENSMUST00000108044.4 ENSMUST00000195684.6 |
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CDS-3UTR CCA 90 bp | AATCTACTGTGTTTGTTCAGCACAGTCTCTGCTCTAGACTTCCCTAGAATATTCGGATCCTTGGGGTTTTaGATATTTCCTTACAGTTCT | + |
Preference number: 4 (lower is better) Translates to: NLLCLFSTVSALDFPRIFGSLGF*IFPYSS Trigger: AGAACTGTAAGGAAATATCCAAAACCCCAAGGATCC...GAATATTCTAGGGAAGTCTAGAGCAGAGACTGTGCTGAACAAACACAGTAGATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000087983.8 ENSMUST00000108044.4 ENSMUST00000195684.6 |
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CDS-3UTR CCA 90 bp | TCAAATAAAAGGAAGACCAGTGTTTCTTTCCTTTGCTGGGTGCAGGCACAAAAAGGATCCTTGGGGTTTTaGATATTTCCTTACAGTTCT | + |
Preference number: 4 (lower is better) Translates to: SNKRKTSVSFLCWVQAQKGSLGF*IFPYSS Trigger: AGAACTGTAAGGAAATATCCAAAACCCCAAGGATCC...TTTTTGTGCCTGCACCCAGCAAAGGAAAGAAACACTGGTCTTCCTTTTATTTGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000167723.8 ENSMUST00000193391.6 ENSMUST00000193793.6 |
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CDS-3UTR CCA 90 bp | TATAAAATAAACTTCATGTGTCGAAGCTTGGCTGATAGAAGAACAAAGCGAAGTTACCGTGTCCCATTATaGTGGACAGAAAACACGCAG | + |
Preference number: 4 (lower is better) Translates to: YKINFMCRSLADRRTKRSYRVPL*WTENTQ Trigger: CTGCGTGTTTTCTGTCCACCATAATGGGACACGGTA...ACTTCGCTTTGTTCTTCTATCAGCCAAGCTTCGACACATGAAGTTTATTTTATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000087983.8 ENSMUST00000108044.4 ENSMUST00000195684.6 |
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3UTR CAA 72 bp | AGGGCACCAGAATTGGCTCATAAAAACAGCAAGCATTaGTTGATTGTTTGCTACAGTTTAGCAGCTAGTATG | + |
Preference number: 4 (lower is better) Translates to: RAPELAHKNSKH*LIVCYSLAASM Trigger: CATACTAGCTGCTAAACTGTAGCAAACAATCAACAAATGCTTGCTGTTTTTATGAGCCAATTCTGGTGCCCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000108044.4 |
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CDS-3UTR TCA 90 bp | GAGACAGTTCACAGACATGAGACATCAGAAGAAACACATCTGTTTTCTCACAAAATCGTCTTTATTCAATaGAGCACTGCAGTTCAACTC | + |
Preference number: 4 (lower is better) Translates to: ETVHRHETSEETHLFSHKIVFIQ*STAVQL Trigger: GAGTTGAACTGCAGTGCTTCATTGAATAAAGACGAT...TTTGTGAGAAAACAGATGTGTTTCTTCTGATGTCTCATGTCTGTGAACTGTCTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000167723.8 ENSMUST00000193391.6 ENSMUST00000193793.6 |
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CDS-3UTR CCA 90 bp | ATATCGCAGGTTCCATTTCAAAGGATGTACGAAAAGGTTGAAGAAACAAGGAAGTGCAGATATGCCACATaGCTTCAGATAAAAAGGTTC | + |
Preference number: 4 (lower is better) Translates to: ISQVPFQRMYEKVEETRKCRYAT*LQIKRF Trigger: GAACCTTTTTATCTGAAGCCATGTGGCATATCTGCA...CTTCCTTGTTTCTTCAACCTTTTCGTACATCCTTTGAAATGGAACCTGCGATAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000108044.4 |
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3UTR CAA 72 bp | GCACCAGAATTGGCTCATAAAAACAGCAAGCATTTGTaGATTGTTTGCTACAGTTTAGCAGCTAGTATGATC | + |
Preference number: 4 (lower is better) Translates to: APELAHKNSKHL*IVCYSLAASMI Trigger: GATCATACTAGCTGCTAAACTGTAGCAAACAATCAACAAATGCTTGCTGTTTTTATGAGCCAATTCTGGTGC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000108044.4 |
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CDS-3UTR TCA 90 bp | TCAGAGATCATTAGTGGGATCATTCAAATAAAAGGAAGACCAGTGTTTCTTTCCATCGTCTTTATTCAATaGAGCACTGCAGTTCAACTC | + |
Preference number: 4 (lower is better) Translates to: SEIISGIIQIKGRPVFLSIVFIQ*STAVQL Trigger: GAGTTGAACTGCAGTGCTTCATTGAATAAAGACGAT...GGAAAGAAACACTGGTCTTCCTTTTATTTGAATGATCCCACTAATGATCTCTGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000167723.8 ENSMUST00000193391.6 ENSMUST00000193793.6 |
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CDS-3UTR GCA 90 bp | TCAGAGATCATTAGTGGGATCATTCAAATAAAAGGAAGACCAGTGTTTCTTTCCTTGAAGCATGCAGTTTaGCTTCAGAAATCCATGTTG | + |
Preference number: 4 (lower is better) Translates to: SEIISGIIQIKGRPVFLSLKHAV*LQKSML Trigger: CAACATGGATTTCTGAAGGCAAACTGCATGCTTCAA...GGAAAGAAACACTGGTCTTCCTTTTATTTGAATGATCCCACTAATGATCTCTGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000167723.8 ENSMUST00000193391.6 |
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3UTR CAA 72 bp | TATGTATGTATGTTTATGTGTGTATGCTTATGTATATaGTGTTTCTTCTACTGCTATGTTTCTCCTCTGCCC | + |
Preference number: 4 (lower is better) Translates to: YVCMFMCVCLCI*CFFYCYVSPLP Trigger: GGGCAGAGGAGAAACATAGCAGTAGAAGAAACACAATATACATAAGCATACACACATAAACATACATACATA 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108044.4 |
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CDS TCA 90 bp | GTGCTGAGAGAACAGACCGCGCCTCCGACTCCTCTCTCCATGGCTTaGCGGCTTTTGCGGGCATCAGGTAAACAAGATTCTTCCAGAACC | + |
Preference number: 5 (lower is better) Translates to: VLREQTAPPTPLSMA*RLLRASGKQDSSRT Trigger: GGTTCTGGAAGAATCTTGTTTACCTGATGCCCGCAAAAGCCGTCAAGCCATGGAGAGAGGAGTCGGAGGCGCGGTCTGTTCTCTCAGCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000087983.8 ENSMUST00000108044.4 ENSMUST00000195684.6 |
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CDS CCA 90 bp | TGGCTGAGAACGATGATTAGCCTCCGGCTTTTCTCTATCAGTGAATaGATCTCCTCGACAACAGCTCCGCCAGGCACCACATCTCTTTCA | + |
Preference number: 5 (lower is better) Translates to: WLRTMISLRLFSISE*ISSTTAPPGTTSLS Trigger: TGAAAGAGATGTGGTGCCTGGCGGAGCTGTTGTCGAGGAGATCCATTCACTGATAGAGAAAAGCCGGAGGCTAATCATCGTTCTCAGCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000087983.8 ENSMUST00000108044.4 ENSMUST00000195684.6 |
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CDS-3UTR CAA 90 bp | CACACCAAAACTGCCTGCATGCCCAGGGCACCAGAATTGGCTCATAAAAACAGCCTGCTTGTCACGAGCTaGTCAGAGAAACAGCTGTGT | + |
Preference number: 5 (lower is better) Translates to: HTKTACMPRAPELAHKNSLLVTS*SEKQLC Trigger: ACACAGCTGTTTCTCTGACAAGCTCGTGACAAGCAG...GCTGTTTTTATGAGCCAATTCTGGTGCCCTGGGCATGCAGGCAGTTTTGGTGTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000108044.4 |
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CDS-3UTR CAA 90 bp | TTGGAGATAAAGGTTTGCCAAAGGGGCCACAACCCACAGGTTGGGAATCACTGCCTGCTTGTCACGAGCTaGTCAGAGAAACAGCTGTGT | + |
Preference number: 5 (lower is better) Translates to: LEIKVCQRGHNPQVGNHCLLVTS*SEKQLC Trigger: ACACAGCTGTTTCTCTGACAAGCTCGTGACAAGCAG...GCAGTGATTCCCAACCTGTGGGTTGTGGCCCCTTTGGCAAACCTTTATCTCCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000087983.8 ENSMUST00000108044.4 ENSMUST00000195684.6 |
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CDS-3UTR CAA 90 bp | CACTTGCAAGGTCACAAGAAGCTTTGGGCTTCTAGCTCTAGGCCAGCGGTTCTCGATTCTTCCAGAACCTaGAGTTCATGGAGGGACTGT | + |
Preference number: 5 (lower is better) Translates to: HLQGHKKLWASSSRPAVLDSSRT*SSWRDC Trigger: ACAGTCCCTCCATGAACTCAAGGTTCTGGAAGAATC...GAGAACCGCTGGCCTAGAGCTAGAAGCCCAAAGCTTCTTGTGACCTTGCAAGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195684.6 |
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CDS-3UTR CAA 90 bp | CACTCAGGCACTTGCAAGGTCACAAGAAGCTTTGGGCTTCTAGCTCTAGGCCAGCATCCTTCAGGATCCTaGGGGTTTTGGATATTTCCT | + |
Preference number: 5 (lower is better) Translates to: HSGTCKVTRSFGLLALGQHPSGS*GFWIFP Trigger: AGGAAATATCCAAAACCCCAAGGATCCTGAAGGATG...CTGGCCTAGAGCTAGAAGCCCAAAGCTTCTTGTGACCTTGCAAGTGCCTGAGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000195684.6 |
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CDS CCA 90 bp | GCCACAGAGGCGAGAACAAGCACAGTTACTCCTCCTGTAAAGACATaGCCTGGGATATCAGGTATTTCTTTTCTCACCAAGACGAAGCTC | + |
Preference number: 5 (lower is better) Translates to: ATEARTSTVTPPVKT*PGISGISFLTKTKL Trigger: GAGCTTCGTCTTGGTGAGAAAAGAAATACCTGATATCCCAGGCCATGTCTTTACAGGAGGAGTAACTGTGCTTGTTCTCGCCTCTGTGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000087983.8 ENSMUST00000108044.4 ENSMUST00000167723.8 ENSMUST00000193391.6 ENSMUST00000195684.6 |
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CDS-3UTR CAA 90 bp | TGTAAACACACTCGGACTAACAGCACAAGACGTGTGAGGAGACAGTTCACAGACTGTGAAGCACTGCCTTaGAACCATCTCATGGTGGCT | + |
Preference number: 5 (lower is better) Translates to: CKHTRTNSTRRVRRQFTDCEALP*NHLMVA Trigger: AGCCACCATGAGATGGTTCAAAGGCAGTGCTTCACA...GTCTGTGAACTGTCTCCTCACACGTCTTGTGCTGTTAGTCCGAGTGTGTTTACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000167723.8 ENSMUST00000193391.6 ENSMUST00000193793.6 |
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CDS-3UTR CAA 90 bp | AAGACCAGTGTTTCTTTCCTTTGCTGGGTGCAGGCACAAAAACATGAGCTAGGGCTGGGCGAGCTTCTGTaGTTCAGCTCTCTATACTCA | + |
Preference number: 5 (lower is better) Translates to: KTSVSFLCWVQAQKHELGLGELL*FSSLYS Trigger: TGAGTATAGAGAGCTGAACAACAGAAGCTCGCCCAG...CCCTAGCTCATGTTTTTGTGCCTGCACCCAGCAAAGGAAAGAAACACTGGTCTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000167723.8 ENSMUST00000193391.6 ENSMUST00000193793.6 |
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CDS-3UTR CAA 90 bp | CACACCAAAACTGCCTGCATGCCCAGGGCACCAGAATTGGCTCATAAAAACAGCCATCCTTCAGGATCCTaGGGGTTTTGGATATTTCCT | + |
Preference number: 5 (lower is better) Translates to: HTKTACMPRAPELAHKNSHPSGS*GFWIFP Trigger: AGGAAATATCCAAAACCCCAAGGATCCTGAAGGATG...GCTGTTTTTATGAGCCAATTCTGGTGCCCTGGGCATGCAGGCAGTTTTGGTGTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000108044.4 |
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CDS TCA 90 bp | CCTCCATCTCAACTGGCCAGAATTCCAAGGTGTGATCATGAAAAGTaGCTCTGGGCGAGCTTCTGTTGTTCAGCTCTCTATACTCATGTG | + |
Preference number: 5 (lower is better) Translates to: PPSQLARIPRCDHEK*LWASFCCSALYTHV Trigger: CACATGAGTATAGAGAGCTGAACAACAGAAGCTCGCCCAGAGTCACTTTTCATGATCACACCTTGGAATTCTGGCCAGTTGAGATGGAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000087983.8 ENSMUST00000108044.4 ENSMUST00000167723.8 ENSMUST00000193391.6 ENSMUST00000193793.6 ENSMUST00000195684.6 |
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CDS GCA 90 bp | GCCTTTGAACCATCTCATGGTGGCTGTTTCATTCCTGTGCACTGGTaGAGATATGCCACATGGCTTCAGATAAAAAGGTTCTCCCTCTAC | + |
Preference number: 5 (lower is better) Translates to: AFEPSHGGCFIPVHW*RYATWLQIKRFSLY Trigger: GTAGAGGGAGAACCTTTTTATCTGAAGCCATGTGGCATATCTGCACCAGTGCACAGGAATGAAACAGCCACCATGAGATGGTTCAAAGGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000087983.8 ENSMUST00000108044.4 ENSMUST00000167723.8 ENSMUST00000193391.6 ENSMUST00000193793.6 ENSMUST00000195684.6 |
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CDS CCA 90 bp | ACTGCCTTTGAACCATCTCATGGTGGCTGTTTCATTCCTGTGCACTaGTGCAGATATGCCACATGGCTTCAGATAAAAAGGTTCTCCCTC | + |
Preference number: 5 (lower is better) Translates to: TAFEPSHGGCFIPVH*CRYATWLQIKRFSL Trigger: GAGGGAGAACCTTTTTATCTGAAGCCATGTGGCATATCTGCACCAGTGCACAGGAATGAAACAGCCACCATGAGATGGTTCAAAGGCAGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000087983.8 ENSMUST00000108044.4 ENSMUST00000167723.8 ENSMUST00000193391.6 ENSMUST00000193793.6 ENSMUST00000195684.6 |
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CDS-3UTR CAA 90 bp | GGCCAGCGGTTCTCAACCTTCCTAATGCTTCAACCCTTTAATACAGTTCTTCACTGTGAAGCACTGCCTTaGAACCATCTCATGGTGGCT | + |
Preference number: 5 (lower is better) Translates to: GQRFSTFLMLQPFNTVLHCEALP*NHLMVA Trigger: AGCCACCATGAGATGGTTCAAAGGCAGTGCTTCACA...GTGAAGAACTGTATTAAAGGGTTGAAGCATTAGGAAGGTTGAGAACCGCTGGCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000087983.8 ENSMUST00000108044.4 ENSMUST00000195684.6 |
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CDS-3UTR CAA 90 bp | AGCACAAGACGTGTGAGGAGACAGTTCACAGACATGAGACATCAGAAGAAACACTGTGAAGCACTGCCTTaGAACCATCTCATGGTGGCT | + |
Preference number: 5 (lower is better) Translates to: STRRVRRQFTDMRHQKKHCEALP*NHLMVA Trigger: AGCCACCATGAGATGGTTCAAAGGCAGTGCTTCACA...GTGTTTCTTCTGATGTCTCATGTCTGTGAACTGTCTCCTCACACGTCTTGTGCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000167723.8 ENSMUST00000193391.6 ENSMUST00000193793.6 |
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CDS-3UTR CAA 90 bp | TGTGTGTGTGTGTGTGTGTGTGTGTGTAAACACACTCGGACTAACAGCACAAGATGTGAAGCACTGCCTTaGAACCATCTCATGGTGGCT | + |
Preference number: 5 (lower is better) Translates to: CVCVCVCVCKHTRTNSTRCEALP*NHLMVA Trigger: AGCCACCATGAGATGGTTCAAAGGCAGTGCTTCACA...TCTTGTGCTGTTAGTCCGAGTGTGTTTACACACACACACACACACACACACACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000167723.8 ENSMUST00000193391.6 ENSMUST00000193793.6 |
||
CDS-3UTR CAA 90 bp | CGAAGCTTGGCTGATAGAAGAACAAAGCGAAGTCTCAAACTCTCCCAACTCTCTCTGGGCGAGCTTCTGTaGTTCAGCTCTCTATACTCA | + |
Preference number: 5 (lower is better) Translates to: RSLADRRTKRSLKLSQLSLGELL*FSSLYS Trigger: TGAGTATAGAGAGCTGAACAACAGAAGCTCGCCCAG...AGAGAGTTGGGAGAGTTTGAGACTTCGCTTTGTTCTTCTATCAGCCAAGCTTCG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000087983.8 ENSMUST00000108044.4 ENSMUST00000195684.6 |
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CDS-3UTR CAA 90 bp | ACAGTCTCTGCTCTAGACTTCCCTAGAATATTCTTGCTTCACTCAGGCACTTGCCTGGGCGAGCTTCTGTaGTTCAGCTCTCTATACTCA | + |
Preference number: 5 (lower is better) Translates to: TVSALDFPRIFLLHSGTCLGELL*FSSLYS Trigger: TGAGTATAGAGAGCTGAACAACAGAAGCTCGCCCAG...GCAAGTGCCTGAGTGAAGCAAGAATATTCTAGGGAAGTCTAGAGCAGAGACTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108044.4 ENSMUST00000195684.6 |
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CDS-3UTR CAA 90 bp | CGAAGCTTGGCTGATAGAAGAACAAAGCGAAGTCTCAAACTCTCCCAACTCTCTCTGCTTGTCACGAGCTaGTCAGAGAAACAGCTGTGT | + |
Preference number: 5 (lower is better) Translates to: RSLADRRTKRSLKLSQLSLLVTS*SEKQLC Trigger: ACACAGCTGTTTCTCTGACAAGCTCGTGACAAGCAG...AGAGAGTTGGGAGAGTTTGAGACTTCGCTTTGTTCTTCTATCAGCCAAGCTTCG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000087983.8 ENSMUST00000108044.4 ENSMUST00000195684.6 |
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CDS CCA 90 bp | GGAGTAGTAGCCCTCATCTCCAAACTCGGCATCCTTCAGGATCCTTaGGGTTTTGGATATTTCCTTACAGTTCTTATACAGCCATGTGTC | + |
Preference number: 5 (lower is better) Translates to: GVVALISKLGILQDP*GFGYFLTVLIQPCV Trigger: GACACATGGCTGTATAAGAACTGTAAGGAAATATCCAAAACCCCAAGGATCCTGAAGGATGCCGAGTTTGGAGATGAGGGCTACTACTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000087983.8 ENSMUST00000108044.4 ENSMUST00000167723.8 ENSMUST00000193391.6 ENSMUST00000193793.6 ENSMUST00000195684.6 |
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CDS CCA 90 bp | AGAGGCGAGAACAAGCACAGTTACTCCTCCTGTAAAGACATGGCCTaGGATATCAGGTATTTCTTTTCTCACCAAGACGAAGCTCTTGGT | + |
Preference number: 5 (lower is better) Translates to: RGENKHSYSSCKDMA*DIRYFFSHQDEALG Trigger: ACCAAGAGCTTCGTCTTGGTGAGAAAAGAAATACCTGATATCCCAGGCCATGTCTTTACAGGAGGAGTAACTGTGCTTGTTCTCGCCTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000087983.8 ENSMUST00000108044.4 ENSMUST00000167723.8 ENSMUST00000193391.6 ENSMUST00000195684.6 |
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CDS CCA 90 bp | TTGCGGGCATCAGGTAAACAAGATTCTTCCAGAACCTTGAGTTCATaGAGGGACTGTCAGCCCTCCATTTTAGAACTCTGTAGGACTTCA | + |
Preference number: 5 (lower is better) Translates to: LRASGKQDSSRTLSS*RDCQPSILELCRTS Trigger: TGAAGTCCTACAGAGTTCTAAAATGGAGGGCTGACAGTCCCTCCATGAACTCAAGGTTCTGGAAGAATCTTGTTTACCTGATGCCCGCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000087983.8 ENSMUST00000108044.4 ENSMUST00000195684.6 |
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CDS-3UTR CAA 90 bp | CTAATGCTTCAACCCTTTAATACAGTTCTTCACACTGTGGTGAAACCCCCAACCTGTGAAGCACTGCCTTaGAACCATCTCATGGTGGCT | + |
Preference number: 5 (lower is better) Translates to: LMLQPFNTVLHTVVKPPTCEALP*NHLMVA Trigger: AGCCACCATGAGATGGTTCAAAGGCAGTGCTTCACA...GGTTGGGGGTTTCACCACAGTGTGAAGAACTGTATTAAAGGGTTGAAGCATTAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000087983.8 ENSMUST00000108044.4 ENSMUST00000195684.6 |
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CDS-3UTR CAA 90 bp | ATGTGTCGAAGCTTGGCTGATAGAAGAACAAAGCGAAGTCTCAAACTCTCCCAACTGGGCGAGCTTCTGTaGTTCAGCTCTCTATACTCA | + |
Preference number: 5 (lower is better) Translates to: MCRSLADRRTKRSLKLSQLGELL*FSSLYS Trigger: TGAGTATAGAGAGCTGAACAACAGAAGCTCGCCCAG...TTGGGAGAGTTTGAGACTTCGCTTTGTTCTTCTATCAGCCAAGCTTCGACACAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000087983.8 ENSMUST00000108044.4 ENSMUST00000195684.6 |
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CDS-3UTR CAA 90 bp | GAACGAGGCTCAGAGATCATTAGTGGGATCATTCAAATAAAAGGAAGACCAGTGCTGCTTGTCACGAGCTaGTCAGAGAAACAGCTGTGT | + |
Preference number: 5 (lower is better) Translates to: ERGSEIISGIIQIKGRPVLLVTS*SEKQLC Trigger: ACACAGCTGTTTCTCTGACAAGCTCGTGACAAGCAG...CACTGGTCTTCCTTTTATTTGAATGATCCCACTAATGATCTCTGAGCCTCGTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000167723.8 ENSMUST00000193391.6 ENSMUST00000193793.6 |
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CDS-3UTR CAA 90 bp | TGTGTGTGTGTGTGTGTGTGTGTGTGTAAACACACTCGGACTAACAGCACAAGACATCCTTCAGGATCCTaGGGGTTTTGGATATTTCCT | + |
Preference number: 5 (lower is better) Translates to: CVCVCVCVCKHTRTNSTRHPSGS*GFWIFP Trigger: AGGAAATATCCAAAACCCCAAGGATCCTGAAGGATG...TCTTGTGCTGTTAGTCCGAGTGTGTTTACACACACACACACACACACACACACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000167723.8 ENSMUST00000193391.6 ENSMUST00000193793.6 |
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CDS-3UTR CAA 90 bp | ATGTGTCGAAGCTTGGCTGATAGAAGAACAAAGCGAAGTCTCAAACTCTCCCAAGATTCTTCCAGAACCTaGAGTTCATGGAGGGACTGT | + |
Preference number: 5 (lower is better) Translates to: MCRSLADRRTKRSLKLSQDSSRT*SSWRDC Trigger: ACAGTCCCTCCATGAACTCAAGGTTCTGGAAGAATC...TTGGGAGAGTTTGAGACTTCGCTTTGTTCTTCTATCAGCCAAGCTTCGACACAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000087983.8 ENSMUST00000108044.4 ENSMUST00000195684.6 |
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CDS TCA 90 bp | AATCCATGTTGTCGTCTCCTTCCTGTCTTCTTGCACATTAGGGTCTaGGCTGTCCTCTTTCCTGATGCTCCAATAAAACAGATCGTCTTT | + |
Preference number: 5 (lower is better) Translates to: NPCCRLLPVFLHIRV*AVLFPDAPIKQIVF Trigger: AAAGACGATCTGTTTTATTGGAGCATCAGGAAAGAGGACAGCTCAGACCCTAATGTGCAAGAAGACAGGAAGGAGACGACAACATGGATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000087983.8 ENSMUST00000108044.4 ENSMUST00000167723.8 ENSMUST00000193391.6 ENSMUST00000195684.6 |
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CDS-3UTR CAA 90 bp | CGAGGCTCAGAGATCATTAGTGGGATCATTCAAATAAAAGGAAGACCAGTGTTTCTGGGCGAGCTTCTGTaGTTCAGCTCTCTATACTCA | + |
Preference number: 5 (lower is better) Translates to: RGSEIISGIIQIKGRPVFLGELL*FSSLYS Trigger: TGAGTATAGAGAGCTGAACAACAGAAGCTCGCCCAG...AAACACTGGTCTTCCTTTTATTTGAATGATCCCACTAATGATCTCTGAGCCTCG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000167723.8 ENSMUST00000193391.6 ENSMUST00000193793.6 |
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CDS-3UTR CAA 90 bp | TCAAATAAAAGGAAGACCAGTGTTTCTTTCCTTTGCTGGGTGCAGGCACAAAAACTGCTTGTCACGAGCTaGTCAGAGAAACAGCTGTGT | + |
Preference number: 5 (lower is better) Translates to: SNKRKTSVSFLCWVQAQKLLVTS*SEKQLC Trigger: ACACAGCTGTTTCTCTGACAAGCTCGTGACAAGCAG...TTTTTGTGCCTGCACCCAGCAAAGGAAAGAAACACTGGTCTTCCTTTTATTTGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000167723.8 ENSMUST00000193391.6 ENSMUST00000193793.6 |
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CDS-3UTR CAA 90 bp | GAAGCTTGGCTGATAGAAGAACAAAGCGAAGTCTCAAACTCTCCCAACTCTCTTCATCCTTCAGGATCCTaGGGGTTTTGGATATTTCCT | + |
Preference number: 5 (lower is better) Translates to: EAWLIEEQSEVSNSPNSLHPSGS*GFWIFP Trigger: AGGAAATATCCAAAACCCCAAGGATCCTGAAGGATG...AAGAGAGTTGGGAGAGTTTGAGACTTCGCTTTGTTCTTCTATCAGCCAAGCTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000087983.8 ENSMUST00000108044.4 ENSMUST00000195684.6 |
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CDS-3UTR CAA 90 bp | ACTCCAGGCTGGGAACGAGGCTCAGAGATCATTAGTGGGATCATTCAAATAAAACATCCTTCAGGATCCTaGGGGTTTTGGATATTTCCT | + |
Preference number: 5 (lower is better) Translates to: TPGWERGSEIISGIIQIKHPSGS*GFWIFP Trigger: AGGAAATATCCAAAACCCCAAGGATCCTGAAGGATG...TTTTATTTGAATGATCCCACTAATGATCTCTGAGCCTCGTTCCCAGCCTGGAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000167723.8 ENSMUST00000193391.6 ENSMUST00000193793.6 |
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CDS-3UTR CAA 90 bp | AAGACCAGTGTTTCTTTCCTTTGCTGGGTGCAGGCACAAAAACATGAGCTAGGGGAAATCTCAGTATTTTaGAAGCATGCAGTTTGCCTT | + |
Preference number: 5 (lower is better) Translates to: KTSVSFLCWVQAQKHELGEISVF*KHAVCL Trigger: AAGGCAAACTGCATGCTTCAAAAATACTGAGATTTC...CCCTAGCTCATGTTTTTGTGCCTGCACCCAGCAAAGGAAAGAAACACTGGTCTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000167723.8 ENSMUST00000193391.6 |
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CDS-3UTR CAA 90 bp | TTCTCAACCTTCCTAATGCTTCAACCCTTTAATACAGTTCTTCACACTGTGGTGGATTCTTCCAGAACCTaGAGTTCATGGAGGGACTGT | + |
Preference number: 5 (lower is better) Translates to: FSTFLMLQPFNTVLHTVVDSSRT*SSWRDC Trigger: ACAGTCCCTCCATGAACTCAAGGTTCTGGAAGAATC...CACCACAGTGTGAAGAACTGTATTAAAGGGTTGAAGCATTAGGAAGGTTGAGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000087983.8 ENSMUST00000108044.4 ENSMUST00000195684.6 |
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CDS-3UTR CAA 90 bp | TCAGAGATCATTAGTGGGATCATTCAAATAAAAGGAAGACCAGTGTTTCTTTCCCTGGGCGAGCTTCTGTaGTTCAGCTCTCTATACTCA | + |
Preference number: 5 (lower is better) Translates to: SEIISGIIQIKGRPVFLSLGELL*FSSLYS Trigger: TGAGTATAGAGAGCTGAACAACAGAAGCTCGCCCAG...GGAAAGAAACACTGGTCTTCCTTTTATTTGAATGATCCCACTAATGATCTCTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000167723.8 ENSMUST00000193391.6 ENSMUST00000193793.6 |
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CDS-3UTR CAA 90 bp | GGCCAGCGGTTCTCAACCTTCCTAATGCTTCAACCCTTTAATACAGTTCTTCACGAGAAACAGCTGTGTTaGTTTCTTTTGGTGACATTT | + |
Preference number: 5 (lower is better) Translates to: GQRFSTFLMLQPFNTVLHEKQLC*FLLVTF Trigger: AAATGTCACCAAAAGAAACAAACACAGCTGTTTCTC...GTGAAGAACTGTATTAAAGGGTTGAAGCATTAGGAAGGTTGAGAACCGCTGGCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000087983.8 ENSMUST00000108044.4 ENSMUST00000195684.6 |
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CDS-3UTR CAA 90 bp | TGTGTGTGTGTGTGTGTGTGTGTGTGTAAACACACTCGGACTAACAGCACAAGAGAGAAACAGCTGTGTTaGTTTCTTTTGGTGACATTT | + |
Preference number: 5 (lower is better) Translates to: CVCVCVCVCKHTRTNSTREKQLC*FLLVTF Trigger: AAATGTCACCAAAAGAAACAAACACAGCTGTTTCTC...TCTTGTGCTGTTAGTCCGAGTGTGTTTACACACACACACACACACACACACACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000167723.8 ENSMUST00000193391.6 ENSMUST00000193793.6 |
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CDS-3UTR CAA 90 bp | CGAAGCTTGGCTGATAGAAGAACAAAGCGAAGTCTCAAACTCTCCCAACTCTCTGAGAAACAGCTGTGTTaGTTTCTTTTGGTGACATTT | + |
Preference number: 5 (lower is better) Translates to: RSLADRRTKRSLKLSQLSEKQLC*FLLVTF Trigger: AAATGTCACCAAAAGAAACAAACACAGCTGTTTCTC...AGAGAGTTGGGAGAGTTTGAGACTTCGCTTTGTTCTTCTATCAGCCAAGCTTCG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000087983.8 ENSMUST00000108044.4 ENSMUST00000195684.6 |
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CDS-3UTR CAA 90 bp | TCAAATAAAAGGAAGACCAGTGTTTCTTTCCTTTGCTGGGTGCAGGCACAAAAACATCCTTCAGGATCCTaGGGGTTTTGGATATTTCCT | + |
Preference number: 5 (lower is better) Translates to: SNKRKTSVSFLCWVQAQKHPSGS*GFWIFP Trigger: AGGAAATATCCAAAACCCCAAGGATCCTGAAGGATG...TTTTTGTGCCTGCACCCAGCAAAGGAAAGAAACACTGGTCTTCCTTTTATTTGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000167723.8 ENSMUST00000193391.6 ENSMUST00000193793.6 |
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CDS-3UTR CAA 90 bp | AAAGGAAGACCAGTGTTTCTTTCCTTTGCTGGGTGCAGGCACAAAAACATGAGCGAAATCTCAGTATTTTaGAAGCATGCAGTTTGCCTT | + |
Preference number: 5 (lower is better) Translates to: KGRPVFLSFAGCRHKNMSEISVF*KHAVCL Trigger: AAGGCAAACTGCATGCTTCAAAAATACTGAGATTTC...GCTCATGTTTTTGTGCCTGCACCCAGCAAAGGAAAGAAACACTGGTCTTCCTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000167723.8 ENSMUST00000193391.6 |
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CDS-3UTR CAA 90 bp | TTCAGCACAGTCTCTGCTCTAGACTTCCCTAGAATATTCTTGCTTCACTCAGGCGAAATCTCAGTATTTTaGAAGCATGCAGTTTGCCTT | + |
Preference number: 5 (lower is better) Translates to: FSTVSALDFPRIFLLHSGEISVF*KHAVCL Trigger: AAGGCAAACTGCATGCTTCAAAAATACTGAGATTTC...GCCTGAGTGAAGCAAGAATATTCTAGGGAAGTCTAGAGCAGAGACTGTGCTGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000087983.8 ENSMUST00000108044.4 ENSMUST00000195684.6 |
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CDS-3UTR CAA 90 bp | GGCTGGGAACGAGGCTCAGAGATCATTAGTGGGATCATTCAAATAAAAGGAAGAGAGAAACAGCTGTGTTaGTTTCTTTTGGTGACATTT | + |
Preference number: 5 (lower is better) Translates to: GWERGSEIISGIIQIKGREKQLC*FLLVTF Trigger: AAATGTCACCAAAAGAAACAAACACAGCTGTTTCTC...TCTTCCTTTTATTTGAATGATCCCACTAATGATCTCTGAGCCTCGTTCCCAGCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000167723.8 ENSMUST00000193391.6 ENSMUST00000193793.6 |
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CDS-3UTR CAA 90 bp | GAAGCTTGGCTGATAGAAGAACAAAGCGAAGTCTCAAACTCTCCCAACTCTCTTGAAATCTCAGTATTTTaGAAGCATGCAGTTTGCCTT | + |
Preference number: 5 (lower is better) Translates to: EAWLIEEQSEVSNSPNSLEISVF*KHAVCL Trigger: AAGGCAAACTGCATGCTTCAAAAATACTGAGATTTC...AAGAGAGTTGGGAGAGTTTGAGACTTCGCTTTGTTCTTCTATCAGCCAAGCTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000087983.8 ENSMUST00000108044.4 ENSMUST00000195684.6 |
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CDS-3UTR CAA 90 bp | AACAAAAGTATCTTCCAGTGCCGAGAGATGCATATTTCAGCAGGAGGTGTTGTGGAAATCTCAGTATTTTaGAAGCATGCAGTTTGCCTT | + |
Preference number: 5 (lower is better) Translates to: NKSIFQCREMHISAGGVVEISVF*KHAVCL Trigger: AAGGCAAACTGCATGCTTCAAAAATACTGAGATTTC...CACAACACCTCCTGCTGAAATATGCATCTCTCGGCACTGGAAGATACTTTTGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108044.4 |
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CDS CCA 90 bp | TTTCAAATATGCATAACTTATACCCAAACTGTTTCTCCAGGACCCTaGGTAACGTCTCCACAGCAAAAGTATACTCTTCTTTATTCTCAG | + |
Preference number: 5 (lower is better) Translates to: FQICITYTQTVSPGP*VTSPQQKYTLLYSQ Trigger: CTGAGAATAAAGAAGAGTATACTTTTGCTGTGGAGACGTTACCCAGGGTCCTGGAGAAACAGTTTGGGTATAAGTTATGCATATTTGAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000087983.8 ENSMUST00000108044.4 ENSMUST00000195684.6 |
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CDS-3UTR CAA 90 bp | AATCTACTGTGTTTGTTCAGCACAGTCTCTGCTCTAGACTTCCCTAGAATATTCGAGAAACAGCTGTGTTaGTTTCTTTTGGTGACATTT | + |
Preference number: 5 (lower is better) Translates to: NLLCLFSTVSALDFPRIFEKQLC*FLLVTF Trigger: AAATGTCACCAAAAGAAACAAACACAGCTGTTTCTC...GAATATTCTAGGGAAGTCTAGAGCAGAGACTGTGCTGAACAAACACAGTAGATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000087983.8 ENSMUST00000108044.4 ENSMUST00000195684.6 |
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CDS-3UTR CAA 90 bp | GAGACAGTTCACAGACATGAGACATCAGAAGAAACACATCTGTTTTCTCACAAAGAGAAACAGCTGTGTTaGTTTCTTTTGGTGACATTT | + |
Preference number: 5 (lower is better) Translates to: ETVHRHETSEETHLFSHKEKQLC*FLLVTF Trigger: AAATGTCACCAAAAGAAACAAACACAGCTGTTTCTC...TTTGTGAGAAAACAGATGTGTTTCTTCTGATGTCTCATGTCTGTGAACTGTCTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000167723.8 ENSMUST00000193391.6 ENSMUST00000193793.6 |
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CDS GCA 72 bp | CGCCTCCGACTCCTCTCTCCATGGCTTGACGGCTTTTaGGGGCATCAGGTAAACAAGATTCTTCCAGAACCT | + |
Preference number: 6 (lower is better) Translates to: RLRLLSPWLDGF*GHQVNKILPEP Trigger: AGGTTCTGGAAGAATCTTGTTTACCTGATGCCCGCAAAAGCCGTCAAGCCATGGAGAGAGGAGTCGGAGGCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000087983.8 ENSMUST00000108044.4 ENSMUST00000195684.6 |
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CDS CCA 72 bp | ACGATGATTAGCCTCCGGCTTTTCTCTATCAGTGAATaGATCTCCTCGACAACAGCTCCGCCAGGCACCACA | + |
Preference number: 6 (lower is better) Translates to: TMISLRLFSISE*ISSTTAPPGTT Trigger: TGTGGTGCCTGGCGGAGCTGTTGTCGAGGAGATCCATTCACTGATAGAGAAAAGCCGGAGGCTAATCATCGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000087983.8 ENSMUST00000108044.4 ENSMUST00000195684.6 |
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CDS CCA 72 bp | AAGATGATCTTAATCTTCCTCTCTACCAGTGCTTCGTaGAGTCCACTCTCGAGCTCACGCCTGGCTCCGTTA | + |
Preference number: 6 (lower is better) Translates to: KMILIFLSTSAS*SPLSSSRLAPL Trigger: TAACGGAGCCAGGCGTGAGCTCGAGAGTGGACTCCACGAAGCACTGGTAGAGAGGAAGATTAAGATCATCTT 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000087983.8 ENSMUST00000108044.4 ENSMUST00000195684.6 |
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CDS TCA 72 bp | GGGCGAGCTTCTGTTGTTCAGCTCTCTATACTCATGTaGAGCACTGCCTTTGAACCATCTCATGGTGGCTGT | + |
Preference number: 6 (lower is better) Translates to: GRASVVQLSILM*STAFEPSHGGC Trigger: ACAGCCACCATGAGATGGTTCAAAGGCAGTGCTTCACATGAGTATAGAGAGCTGAACAACAGAAGCTCGCCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000087983.8 ENSMUST00000108044.4 ENSMUST00000167723.8 ENSMUST00000193391.6 ENSMUST00000193793.6 ENSMUST00000195684.6 |
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CDS CAA 90 bp | GAGCTTCTGTTGTTCAGCTCTCTATACTCATGTGAAGCACTGCCTTaGAACCATCTCATGGTGGCTGTTTCATTCCTGTGCACTGGTGCA | + |
Preference number: 6 (lower is better) Translates to: ELLLFSSLYSCEALP*NHLMVAVSFLCTGA Trigger: TGCACCAGTGCACAGGAATGAAACAGCCACCATGAGATGGTTCAAAGGCAGTGCTTCACATGAGTATAGAGAGCTGAACAACAGAAGCTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000087983.8 ENSMUST00000108044.4 ENSMUST00000167723.8 ENSMUST00000193391.6 ENSMUST00000193793.6 ENSMUST00000195684.6 |
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CDS TCA 72 bp | CAACTGGCCAGAATTCCAAGGTGTGATCATGAAAAGTaGCTCTGGGCGAGCTTCTGTTGTTCAGCTCTCTAT | + |
Preference number: 6 (lower is better) Translates to: QLARIPRCDHEK*LWASFCCSALY Trigger: ATAGAGAGCTGAACAACAGAAGCTCGCCCAGAGTCACTTTTCATGATCACACCTTGGAATTCTGGCCAGTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000087983.8 ENSMUST00000108044.4 ENSMUST00000167723.8 ENSMUST00000193391.6 ENSMUST00000193793.6 ENSMUST00000195684.6 |
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CDS TCA 72 bp | TGTCGTCTCCTTCCTGTCTTCTTGCACATTAGGGTCTaGGCTGTCCTCTTTCCTGATGCTCCAATAAAACAG | + |
Preference number: 6 (lower is better) Translates to: CRLLPVFLHIRV*AVLFPDAPIKQ Trigger: CTGTTTTATTGGAGCATCAGGAAAGAGGACAGCTCAGACCCTAATGTGCAAGAAGACAGGAAGGAGACGACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000087983.8 ENSMUST00000108044.4 ENSMUST00000167723.8 ENSMUST00000193391.6 ENSMUST00000193793.6 ENSMUST00000195684.6 |
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CDS GCA 72 bp | TGGTGGCTGTTTCATTCCTGTGCACTGGTGCAGATATaGCACATGGCTTCAGATAAAAAGGTTCTCCCTCTA | + |
Preference number: 6 (lower is better) Translates to: WWLFHSCALVQI*HMASDKKVLPL Trigger: TAGAGGGAGAACCTTTTTATCTGAAGCCATGTGGCATATCTGCACCAGTGCACAGGAATGAAACAGCCACCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000087983.8 ENSMUST00000108044.4 ENSMUST00000167723.8 ENSMUST00000193391.6 ENSMUST00000193793.6 ENSMUST00000195684.6 |
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CDS GCA 72 bp | CCATCTCATGGTGGCTGTTTCATTCCTGTGCACTGGTaGAGATATGCCACATGGCTTCAGATAAAAAGGTTC | + |
Preference number: 6 (lower is better) Translates to: PSHGGCFIPVHW*RYATWLQIKRF Trigger: GAACCTTTTTATCTGAAGCCATGTGGCATATCTGCACCAGTGCACAGGAATGAAACAGCCACCATGAGATGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000087983.8 ENSMUST00000108044.4 ENSMUST00000167723.8 ENSMUST00000193391.6 ENSMUST00000193793.6 ENSMUST00000195684.6 |
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CDS CCA 72 bp | GAACCATCTCATGGTGGCTGTTTCATTCCTGTGCACTaGTGCAGATATGCCACATGGCTTCAGATAAAAAGG | + |
Preference number: 6 (lower is better) Translates to: EPSHGGCFIPVH*CRYATWLQIKR Trigger: CCTTTTTATCTGAAGCCATGTGGCATATCTGCACCAGTGCACAGGAATGAAACAGCCACCATGAGATGGTTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000087983.8 ENSMUST00000108044.4 ENSMUST00000167723.8 ENSMUST00000193391.6 ENSMUST00000193793.6 ENSMUST00000195684.6 |
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CDS CAA 72 bp | TTGCGGGCATCAGGTAAACAAGATTCTTCCAGAACCTaGAGTTCATGGAGGGACTGTCAGCCCTCCATTTTA | + |
Preference number: 6 (lower is better) Translates to: LRASGKQDSSRT*SSWRDCQPSIL Trigger: TAAAATGGAGGGCTGACAGTCCCTCCATGAACTCAAGGTTCTGGAAGAATCTTGTTTACCTGATGCCCGCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000087983.8 ENSMUST00000108044.4 ENSMUST00000195684.6 |
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CDS CAA 90 bp | AGGAGTAGTAGCCCTCATCTCCAAACTCGGCATCCTTCAGGATCCTaGGGGTTTTGGATATTTCCTTACAGTTCTTATACAGCCATGTGT | + |
Preference number: 6 (lower is better) Translates to: RSSSPHLQTRHPSGS*GFWIFPYSSYTAMC Trigger: ACACATGGCTGTATAAGAACTGTAAGGAAATATCCAAAACCCCAAGGATCCTGAAGGATGCCGAGTTTGGAGATGAGGGCTACTACTCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000087983.8 ENSMUST00000108044.4 ENSMUST00000167723.8 ENSMUST00000193391.6 ENSMUST00000193793.6 ENSMUST00000195684.6 |
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CDS TCA 72 bp | TGTTCAGCTCTCTATACTCATGTGAAGCACTGCCTTTaGACCATCTCATGGTGGCTGTTTCATTCCTGTGCA | + |
Preference number: 6 (lower is better) Translates to: CSALYTHVKHCL*TISWWLFHSCA Trigger: TGCACAGGAATGAAACAGCCACCATGAGATGGTTCAAAGGCAGTGCTTCACATGAGTATAGAGAGCTGAACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000087983.8 ENSMUST00000108044.4 ENSMUST00000167723.8 ENSMUST00000193391.6 ENSMUST00000193793.6 ENSMUST00000195684.6 |
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CDS CCA 72 bp | TGTTTCATTCCTGTGCACTGGTGCAGATATGCCACATaGCTTCAGATAAAAAGGTTCTCCCTCTACCACATG | + |
Preference number: 6 (lower is better) Translates to: CFIPVHWCRYAT*LQIKRFSLYHM Trigger: CATGTGGTAGAGGGAGAACCTTTTTATCTGAAGCCATGTGGCATATCTGCACCAGTGCACAGGAATGAAACA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000087983.8 ENSMUST00000108044.4 ENSMUST00000167723.8 ENSMUST00000193391.6 ENSMUST00000193793.6 ENSMUST00000195684.6 |
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CDS CCA 72 bp | GCCCTCATCTCCAAACTCGGCATCCTTCAGGATCCTTaGGGTTTTGGATATTTCCTTACAGTTCTTATACAG | + |
Preference number: 6 (lower is better) Translates to: ALISKLGILQDP*GFGYFLTVLIQ Trigger: CTGTATAAGAACTGTAAGGAAATATCCAAAACCCCAAGGATCCTGAAGGATGCCGAGTTTGGAGATGAGGGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000087983.8 ENSMUST00000108044.4 ENSMUST00000167723.8 ENSMUST00000193391.6 ENSMUST00000193793.6 ENSMUST00000195684.6 |
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CDS CCA 72 bp | GCGAGAACAAGCACAGTTACTCCTCCTGTAAAGACATaGCCTGGGATATCAGGTATTTCTTTTCTCACCAAG | + |
Preference number: 6 (lower is better) Translates to: ARTSTVTPPVKT*PGISGISFLTK Trigger: CTTGGTGAGAAAAGAAATACCTGATATCCCAGGCCATGTCTTTACAGGAGGAGTAACTGTGCTTGTTCTCGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000087983.8 ENSMUST00000108044.4 ENSMUST00000167723.8 ENSMUST00000193391.6 ENSMUST00000195684.6 |
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CDS CAA 72 bp | TTGTTCAGCTCTCTATACTCATGTGAAGCACTGCCTTaGAACCATCTCATGGTGGCTGTTTCATTCCTGTGC | + |
Preference number: 6 (lower is better) Translates to: LFSSLYSCEALP*NHLMVAVSFLC Trigger: GCACAGGAATGAAACAGCCACCATGAGATGGTTCAAAGGCAGTGCTTCACATGAGTATAGAGAGCTGAACAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000087983.8 ENSMUST00000108044.4 ENSMUST00000167723.8 ENSMUST00000193391.6 ENSMUST00000193793.6 ENSMUST00000195684.6 |
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CDS CAA 72 bp | ATATCAGGTATTTCTTTTCTCACCAAGACGAAGCTCTaGGTGTCTATGGCTTCTTCGTTGGCCACGGTGCAA | + |
Preference number: 6 (lower is better) Translates to: ISGISFLTKTKL*VSMASSLATVQ Trigger: TTGCACCGTGGCCAACGAAGAAGCCATAGACACCAAGAGCTTCGTCTTGGTGAGAAAAGAAATACCTGATAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000087983.8 ENSMUST00000108044.4 ENSMUST00000167723.8 ENSMUST00000193391.6 ENSMUST00000195684.6 |
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CDS CAA 90 bp | TGGCCTGGGATATCAGGTATTTCTTTTCTCACCAAGACGAAGCTCTaGGTGTCTATGGCTTCTTCGTTGGCCACGGTGCAATTATATAAA | + |
Preference number: 6 (lower is better) Translates to: WPGISGISFLTKTKL*VSMASSLATVQLYK Trigger: TTTATATAATTGCACCGTGGCCAACGAAGAAGCCATAGACACCAAGAGCTTCGTCTTGGTGAGAAAAGAAATACCTGATATCCCAGGCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000087983.8 ENSMUST00000108044.4 ENSMUST00000167723.8 ENSMUST00000193391.6 ENSMUST00000195684.6 |
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CDS CCA 72 bp | TTGAGAAATGTACGTTCCCTCATCCTCCATCTCAACTaGCCAGAATTCCAAGGTGTGATCATGAAAAGTGAC | + |
Preference number: 6 (lower is better) Translates to: LRNVRSLILHLN*PEFQGVIMKSD Trigger: GTCACTTTTCATGATCACACCTTGGAATTCTGGCCAGTTGAGATGGAGGATGAGGGAACGTACATTTCTCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000087983.8 ENSMUST00000108044.4 ENSMUST00000167723.8 ENSMUST00000193391.6 ENSMUST00000193793.6 ENSMUST00000195684.6 |
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CDS CCA 72 bp | TCAGGTAAACAAGATTCTTCCAGAACCTTGAGTTCATaGAGGGACTGTCAGCCCTCCATTTTAGAACTCTGT | + |
Preference number: 6 (lower is better) Translates to: SGKQDSSRTLSS*RDCQPSILELC Trigger: ACAGAGTTCTAAAATGGAGGGCTGACAGTCCCTCCATGAACTCAAGGTTCTGGAAGAATCTTGTTTACCTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000087983.8 ENSMUST00000108044.4 ENSMUST00000195684.6 |
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CDS CAA 72 bp | AGCCCTCATCTCCAAACTCGGCATCCTTCAGGATCCTaGGGGTTTTGGATATTTCCTTACAGTTCTTATACA | + |
Preference number: 6 (lower is better) Translates to: SPHLQTRHPSGS*GFWIFPYSSYT Trigger: TGTATAAGAACTGTAAGGAAATATCCAAAACCCCAAGGATCCTGAAGGATGCCGAGTTTGGAGATGAGGGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000087983.8 ENSMUST00000108044.4 ENSMUST00000167723.8 ENSMUST00000193391.6 ENSMUST00000193793.6 ENSMUST00000195684.6 |
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CDS TCA 72 bp | ACATTTAAGGTCCAATTGCGACGATCATTTCCGACTTaGGAAATGTACGTTCCCTCATCCTCCATCTCAACT | + |
Preference number: 6 (lower is better) Translates to: TFKVQLRRSFPT*EMYVPSSSIST Trigger: AGTTGAGATGGAGGATGAGGGAACGTACATTTCTCAAGTCGGAAATGATCGTCGCAATTGGACCTTAAATGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000087983.8 ENSMUST00000108044.4 ENSMUST00000167723.8 ENSMUST00000193391.6 ENSMUST00000193793.6 ENSMUST00000195684.6 |
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CDS CCA 72 bp | AACAAGCACAGTTACTCCTCCTGTAAAGACATGGCCTaGGATATCAGGTATTTCTTTTCTCACCAAGACGAA | + |
Preference number: 6 (lower is better) Translates to: NKHSYSSCKDMA*DIRYFFSHQDE Trigger: TTCGTCTTGGTGAGAAAAGAAATACCTGATATCCCAGGCCATGTCTTTACAGGAGGAGTAACTGTGCTTGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000087983.8 ENSMUST00000108044.4 ENSMUST00000167723.8 ENSMUST00000193391.6 ENSMUST00000195684.6 |
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CDS CCA 72 bp | TGCATAACTTATACCCAAACTGTTTCTCCAGGACCCTaGGTAACGTCTCCACAGCAAAAGTATACTCTTCTT | + |
Preference number: 6 (lower is better) Translates to: CITYTQTVSPGP*VTSPQQKYTLL Trigger: AAGAAGAGTATACTTTTGCTGTGGAGACGTTACCCAGGGTCCTGGAGAAACAGTTTGGGTATAAGTTATGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000087983.8 ENSMUST00000108044.4 ENSMUST00000195684.6 |
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CDS CAA 72 bp | CTGCTTGTCACGAGCTTGTCAGAGAAACAGCTGTGTTaGTTTCTTTTGGTGACATTTAAGGTCCAATTGCGA | + |
Preference number: 6 (lower is better) Translates to: LLVTSLSEKQLC*FLLVTFKVQLR Trigger: TCGCAATTGGACCTTAAATGTCACCAAAAGAAACAAACACAGCTGTTTCTCTGACAAGCTCGTGACAAGCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000087983.8 ENSMUST00000108044.4 ENSMUST00000167723.8 ENSMUST00000193391.6 ENSMUST00000193793.6 ENSMUST00000195684.6 |
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CDS CCA 72 bp | TTTCTTTTCTCACCAAGACGAAGCTCTTGGTGTCTATaGCTTCTTCGTTGGCCACGGTGCAATTATATAAAA | + |
Preference number: 6 (lower is better) Translates to: FLFSPRRSSWCL*LLRWPRCNYIK Trigger: TTTTATATAATTGCACCGTGGCCAACGAAGAAGCCATAGACACCAAGAGCTTCGTCTTGGTGAGAAAAGAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000087983.8 ENSMUST00000108044.4 ENSMUST00000167723.8 ENSMUST00000193391.6 ENSMUST00000195684.6 |
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CDS CAA 90 bp | TCAACATCTCTGCTTGTCACGAGCTTGTCAGAGAAACAGCTGTGTTaGTTTCTTTTGGTGACATTTAAGGTCCAATTGCGACGATCATTT | + |
Preference number: 6 (lower is better) Translates to: STSLLVTSLSEKQLC*FLLVTFKVQLRRSF Trigger: AAATGATCGTCGCAATTGGACCTTAAATGTCACCAAAAGAAACAAACACAGCTGTTTCTCTGACAAGCTCGTGACAAGCAGAGATGTTGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000087983.8 ENSMUST00000108044.4 ENSMUST00000167723.8 ENSMUST00000193391.6 ENSMUST00000193793.6 ENSMUST00000195684.6 |
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CDS CAA 90 bp | GGAGTTACTTTACTCCTTCCTTCAATAACTGTTATATTGACAGTCTaGGTGATGTTGTACCGTGTCCCATTATGGTGGACAGAAAACACG | + |
Preference number: 6 (lower is better) Translates to: GVTLLLPSITVILTV*VMLYRVPLWWTENT Trigger: CGTGTTTTCTGTCCACCATAATGGGACACGGTACAACATCACCAAGACTGTCAATATAACAGTTATTGAAGGAAGGAGTAAAGTAACTCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000087983.8 ENSMUST00000108044.4 ENSMUST00000167723.8 ENSMUST00000193391.6 ENSMUST00000193793.6 ENSMUST00000195684.6 |
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CDS CAA 72 bp | GATTTGTTAACTTCAACATCTCTGCTTGTCACGAGCTaGTCAGAGAAACAGCTGTGTTTGTTTCTTTTGGTG | + |
Preference number: 6 (lower is better) Translates to: DLLTSTSLLVTS*SEKQLCLFLLV Trigger: CACCAAAAGAAACAAACACAGCTGTTTCTCTGACAAGCTCGTGACAAGCAGAGATGTTGAAGTTAACAAATC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000087983.8 ENSMUST00000108044.4 ENSMUST00000167723.8 ENSMUST00000193391.6 ENSMUST00000193793.6 ENSMUST00000195684.6 |
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CDS CAA 90 bp | AAAATAGCTGGAGTTACTTTACTCCTTCCTTCAATAACTGTTATATaGACAGTCTTGGTGATGTTGTACCGTGTCCCATTATGGTGGACA | + |
Preference number: 6 (lower is better) Translates to: KIAGVTLLLPSITVI*TVLVMLYRVPLWWT Trigger: TGTCCACCATAATGGGACACGGTACAACATCACCAAGACTGTCAATATAACAGTTATTGAAGGAAGGAGTAAAGTAACTCCAGCTATTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000087983.8 ENSMUST00000108044.4 ENSMUST00000167723.8 ENSMUST00000193391.6 ENSMUST00000193793.6 ENSMUST00000195684.6 |
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CDS GCA 72 bp | TTTTACCATCTGTTAGTGTCTCGTCTCTTTCCGCTATaGGCCTATAGAACAGAACCAAGTCAACTTTATAAA | + |
Preference number: 6 (lower is better) Translates to: FYHLLVSRLFPL*AYRTEPSQLYK Trigger: TTTATAAAGTTGACTTGGTTCTGTTCTATAGGCGCATAGCGGAAAGAGACGAGACACTAACAGATGGTAAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000087983.8 ENSMUST00000108044.4 ENSMUST00000195684.6 |
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CDS CAA 72 bp | GGAGTTACTTTACTCCTTCCTTCAATAACTGTTATATaGACAGTCTTGGTGATGTTGTACCGTGTCCCATTA | + |
Preference number: 6 (lower is better) Translates to: GVTLLLPSITVI*TVLVMLYRVPL Trigger: TAATGGGACACGGTACAACATCACCAAGACTGTCAATATAACAGTTATTGAAGGAAGGAGTAAAGTAACTCC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000087983.8 ENSMUST00000108044.4 ENSMUST00000167723.8 ENSMUST00000193391.6 ENSMUST00000193793.6 ENSMUST00000195684.6 |
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CDS CAA 90 bp | ATATGCAGAGATTTGTTAACTTCAACATCTCTGCTTGTCACGAGCTaGTCAGAGAAACAGCTGTGTTTGTTTCTTTTGGTGACATTTAAG | + |
Preference number: 6 (lower is better) Translates to: ICRDLLTSTSLLVTS*SEKQLCLFLLVTFK Trigger: CTTAAATGTCACCAAAAGAAACAAACACAGCTGTTTCTCTGACAAGCTCGTGACAAGCAGAGATGTTGAAGTTAACAAATCTCTGCATAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000087983.8 ENSMUST00000108044.4 ENSMUST00000167723.8 ENSMUST00000193391.6 ENSMUST00000193793.6 ENSMUST00000195684.6 |