Pregenerated sensors for IL18BP (Mus musculus)
Ensembl gene IDs: ENSMUSG00000070427Ensembl transcript IDs: ENSMUST00000094134.5, ENSMUST00000209368.2, ENSMUST00000209844.2, ENSMUST00000211502.2
Found 109 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GTCAAGGTCATGGTGTGGTTGGCTTTATGCAACCCCTGGGCCTGCTaGTCTGGATACTGGGCTGTGGCTAGAGAGGGTTTCTTGAGAAGG | + |
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Preference number: 1 (lower is better) Translates to: VKVMVWLALCNPWAC*SGYWAVAREGFLRR Trigger: CCTTCTCAAGAAACCCTCTCTAGCCACAGCCCAGTATCCAGATCAGCAGGCCCAGGGGTTGCATAAAGCCAACCACACCATGACCTTGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209368.2 |
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| 3UTR TCA 90 bp | AAAGGCAATCACAGCCTATGGTGTAGACTCCACCCTCCAGGTAGATaGGAGCCAGGCTCTGGTCAAGGTCATGGTGTGGTTGGCTTTATG | + |
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Preference number: 1 (lower is better) Translates to: KGNHSLWCRLHPPGR*EPGSGQGHGVVGFM Trigger: CATAAAGCCAACCACACCATGACCTTGACCAGAGCCTGGCTCTCATCTACCTGGAGGGTGGAGTCTACACCATAGGCTGTGATTGCCTTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209368.2 |
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| 3UTR CCA 90 bp | GATAGGCATCTCAATTTCACGTTAAGTGTAAGCAGAGCTATCACTTaGCTAAGGTGTCATCAGGTCTCAGAGGTTCCAGAACACCAGTGG | + |
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Preference number: 1 (lower is better) Translates to: DRHLNFTLSVSRAIT*LRCHQVSEVPEHQW Trigger: CCACTGGTGTTCTGGAACCTCTGAGACCTGATGACACCTTAGCCAAGTGATAGCTCTGCTTACACTTAACGTGAAATTGAGATGCCTATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000094134.5 ENSMUST00000209368.2 ENSMUST00000209844.2 |
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| 3UTR GCA 90 bp | CATGTTATTCTGAATTTTTATTTGGCAAGAGGCAGTGTCTCATGCTaGCTGAGTCAGGCAGAGTTCCTGAGGACAGTACCAGGGTCTAAA | + |
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Preference number: 1 (lower is better) Translates to: HVILNFYLARGSVSC*LSQAEFLRTVPGSK Trigger: TTTAGACCCTGGTACTGTCCTCAGGAACTCTGCCTGACTCAGGCAGCATGAGACACTGCCTCTTGCCAAATAAAAATTCAGAATAACATG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000209844.2 |
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| 3UTR-3UTR TCA 90 bp | TTCGGGTTAACCTTTTTGATTGGTACAGGATGTAGAAATCTGCCAGATAGGCATCTAGAGAGGGTTTCTTaGGAAGGGGACGGAGCTGTC | + |
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Preference number: 2 (lower is better) Translates to: FGLTFLIGTGCRNLPDRHLERVS*EGDGAV Trigger: GACAGCTCCGTCCCCTTCTCAAGAAACCCTCTCTAG...ATGCCTATCTGGCAGATTTCTACATCCTGTACCAATCAAAAAGGTTAACCCGAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000209368.2 |
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| 3UTR-3UTR CCA 90 bp | CAGAGGTTCCAGAACACCAGTGGGATGAATAAGACATCAGAAAAGGTAAACTGGGGTAAACTGGATGGATaGACAGGAGGACAAACAGGA | + |
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Preference number: 2 (lower is better) Translates to: QRFQNTSGMNKTSEKVNWGKLDG*TGGQTG Trigger: TCCTGTTTGTCCTCCTGTCCATCCATCCAGTTTACC...CCAGTTTACCTTTTCTGATGTCTTATTCATCCCACTGGTGTTCTGGAACCTCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000094134.5 ENSMUST00000209368.2 ENSMUST00000209844.2 |
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| 3UTR-3UTR CCA 90 bp | ACAGGATGTAGAAATCTGCCAGATAGGCATCTCAATTTCACGTTAAGTGTAAGCGGTAAACTGGATGGATaGACAGGAGGACAAACAGGA | + |
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Preference number: 2 (lower is better) Translates to: TGCRNLPDRHLNFTLSVSGKLDG*TGGQTG Trigger: TCCTGTTTGTCCTCCTGTCCATCCATCCAGTTTACC...GCTTACACTTAACGTGAAATTGAGATGCCTATCTGGCAGATTTCTACATCCTGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000094134.5 ENSMUST00000209368.2 ENSMUST00000209844.2 |
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| 3UTR-3UTR TCA 90 bp | CAACTAGGCTTCGGGTTAACCTTTTTGATTGGTACAGGATGTAGAAATCTGCCAAGAACACCAGTGGGATaGATAAGACATCAGAAAAGG | + |
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Preference number: 2 (lower is better) Translates to: QLGFGLTFLIGTGCRNLPRTPVG*IRHQKR Trigger: CCTTTTCTGATGTCTTATTCATCCCACTGGTGTTCT...TGGCAGATTTCTACATCCTGTACCAATCAAAAAGGTTAACCCGAAGCCTAGTTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000094134.5 ENSMUST00000209368.2 ENSMUST00000209844.2 |
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| 3UTR-3UTR GCA 90 bp | GTTATATCTCAACTAGGCTTCGGGTTAACCTTTTTGATTGGTACAGGATGTAGAATCACTTGCTGTCACTaGAGTCCCATGTTCCTTGCT | + |
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Preference number: 2 (lower is better) Translates to: VISQLGFGLTFLIGTGCRITCCH*SPMFLA Trigger: AGCAAGGAACATGGGACTGCAGTGACAGCAAGTGAT...TCTACATCCTGTACCAATCAAAAAGGTTAACCCGAAGCCTAGTTGAGATATAAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000209368.2 |
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| 3UTR-3UTR CCA 90 bp | TTGATTGGTACAGGATGTAGAAATCTGCCAGATAGGCATCTCAATTTCACGTTAGGTAAACTGGATGGATaGACAGGAGGACAAACAGGA | + |
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Preference number: 2 (lower is better) Translates to: LIGTGCRNLPDRHLNFTLGKLDG*TGGQTG Trigger: TCCTGTTTGTCCTCCTGTCCATCCATCCAGTTTACC...TAACGTGAAATTGAGATGCCTATCTGGCAGATTTCTACATCCTGTACCAATCAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000094134.5 ENSMUST00000209368.2 ENSMUST00000209844.2 |
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| 3UTR-3UTR TCA 90 bp | AGAAATCTGCCAGATAGGCATCTCAATTTCACGTTAAGTGTAAGCAGAGCTATCAGAACACCAGTGGGATaGATAAGACATCAGAAAAGG | + |
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Preference number: 2 (lower is better) Translates to: RNLPDRHLNFTLSVSRAIRTPVG*IRHQKR Trigger: CCTTTTCTGATGTCTTATTCATCCCACTGGTGTTCT...GATAGCTCTGCTTACACTTAACGTGAAATTGAGATGCCTATCTGGCAGATTTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000094134.5 ENSMUST00000209368.2 ENSMUST00000209844.2 |
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| 3UTR-3UTR CCA 90 bp | AGAAATCTGCCAGATAGGCATCTCAATTTCACGTTAAGTGTAAGCAGAGCTATCGTCTTCAACCCATCCTaGAGAAGTAAATGCACACAT | + |
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Preference number: 2 (lower is better) Translates to: RNLPDRHLNFTLSVSRAIVFNPS*RSKCTH Trigger: ATGTGTGCATTTACTTCTCCAGGATGGGTTGAAGAC...GATAGCTCTGCTTACACTTAACGTGAAATTGAGATGCCTATCTGGCAGATTTCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209368.2 |
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| 3UTR-3UTR TCA 90 bp | GTTATATCTCAACTAGGCTTCGGGTTAACCTTTTTGATTGGTACAGGATGTAGAAGAACACCAGTGGGATaGATAAGACATCAGAAAAGG | + |
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Preference number: 2 (lower is better) Translates to: VISQLGFGLTFLIGTGCRRTPVG*IRHQKR Trigger: CCTTTTCTGATGTCTTATTCATCCCACTGGTGTTCT...TCTACATCCTGTACCAATCAAAAAGGTTAACCCGAAGCCTAGTTGAGATATAAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000094134.5 ENSMUST00000209368.2 ENSMUST00000209844.2 |
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| 3UTR-3UTR CCA 90 bp | AAAGTTATATCTCAACTAGGCTTCGGGTTAACCTTTTTGATTGGTACAGGATGTGTGGTCAGAGCTGAGTaGATGTTGCCAAAGTTATAT | + |
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Preference number: 2 (lower is better) Translates to: KVISQLGFGLTFLIGTGCVVRAE*MLPKLY Trigger: ATATAACTTTGGCAACATCCACTCAGCTCTGACCAC...ACATCCTGTACCAATCAAAAAGGTTAACCCGAAGCCTAGTTGAGATATAACTTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000094134.5 ENSMUST00000209368.2 ENSMUST00000209844.2 |
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| 3UTR TCA 72 bp | GATCTGGATACTGGGCTGTGGCTAGAGAGGGTTTCTTaGGAAGGGGACGGAGCTGTCTTCAACCCATCCTGG | + |
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Preference number: 3 (lower is better) Translates to: DLDTGLWLERVS*EGDGAVFNPSW Trigger: CCAGGATGGGTTGAAGACAGCTCCGTCCCCTTCTCAAGAAACCCTCTCTAGCCACAGCCCAGTATCCAGATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209368.2 |
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| 3UTR TCA 72 bp | ATGGTGTGGTTGGCTTTATGCAACCCCTGGGCCTGCTaGTCTGGATACTGGGCTGTGGCTAGAGAGGGTTTC | + |
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Preference number: 3 (lower is better) Translates to: MVWLALCNPWAC*SGYWAVAREGF Trigger: GAAACCCTCTCTAGCCACAGCCCAGTATCCAGATCAGCAGGCCCAGGGGTTGCATAAAGCCAACCACACCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209368.2 |
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| 3UTR-3UTR CAA 90 bp | ATGAGAGCCAGGCTCTGGTCAAGGTCATGGTGTGGTTGGCTTTATGCAACCCCTGCTAGAGAGGGTTTCTaGAGAAGGGGACGGAGCTGT | + |
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Preference number: 3 (lower is better) Translates to: MRARLWSRSWCGWLYATPAREGF*RRGRSC Trigger: ACAGCTCCGTCCCCTTCTCAAGAAACCCTCTCTAGC...AGGGGTTGCATAAAGCCAACCACACCATGACCTTGACCAGAGCCTGGCTCTCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000209368.2 |
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| 3UTR TCA 72 bp | CTGCAGAGACACAGACTGACATATACAGTTGTGACCTaGCGCAGCCACTGTTCCGTCCTTGCCTTGGGGACA | + |
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Preference number: 3 (lower is better) Translates to: LQRHRLTYTVVT*RSHCSVLALGT Trigger: TGTCCCCAAGGCAAGGACGGAACAGTGGCTGCGTCAGGTCACAACTGTATATGTCAGTCTGTGTCTCTGCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094134.5 ENSMUST00000209844.2 |
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| 3UTR-3UTR CAA 90 bp | GTAAGCAGAGCTATCACTTGGCTAAGGTGTCATCAGGTCTCAGAGGTTCCAGAAAAGCAGAGCTATCACTaGGCTAAGGTGTCATCAGGT | + |
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Preference number: 3 (lower is better) Translates to: VSRAITWLRCHQVSEVPEKQSYH*AKVSSG Trigger: ACCTGATGACACCTTAGCCAAGTGATAGCTCTGCTT...TTCTGGAACCTCTGAGACCTGATGACACCTTAGCCAAGTGATAGCTCTGCTTAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000094134.5 ENSMUST00000209368.2 ENSMUST00000209844.2 |
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| 3UTR-3UTR CAA 90 bp | AAGGGGAAATTGCAGCTCTTTGGAGCCTGTGTTTGGTCTTTCTGGCCCCTGTTCAATAAAAATGAGACCTaGAGCTGCTGCAGCTTTATG | + |
|
Preference number: 3 (lower is better) Translates to: KGKLQLFGACVWSFWPLFNKNET*SCCSFM Trigger: CATAAAGCTGCAGCAGCTCAAGGTCTCATTTTTATT...GAACAGGGGCCAGAAAGACCAAACACAGGCTCCAAAGAGCTGCAATTTCCCCTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000209844.2 |
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| 3UTR-3UTR CAA 90 bp | AAAGGGGAAATTGCAGCTCTTTGGAGCCTGTGTTTGGTCTTTCTGGCCCCTGTTTTCGGGTTAACCTTTTaGATTGGTACAGGATGTAGA | + |
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Preference number: 3 (lower is better) Translates to: KGEIAALWSLCLVFLAPVFGLTF*IGTGCR Trigger: TCTACATCCTGTACCAATCAAAAAGGTTAACCCGAA...AACAGGGGCCAGAAAGACCAAACACAGGCTCCAAAGAGCTGCAATTTCCCCTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000209844.2 |
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| 3UTR-3UTR CAA 90 bp | GTAAGCAGAGCTATCACTTGGCTAAGGTGTCATCAGGTCTCAGAGGTTCCAGAAAGAGCTGAGTGGATGTaGCCAAAGTTATATCTCAAC | + |
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Preference number: 3 (lower is better) Translates to: VSRAITWLRCHQVSEVPERAEWM*PKLYLN Trigger: GTTGAGATATAACTTTGGCAACATCCACTCAGCTCT...TTCTGGAACCTCTGAGACCTGATGACACCTTAGCCAAGTGATAGCTCTGCTTAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000094134.5 ENSMUST00000209368.2 ENSMUST00000209844.2 |
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| 3UTR CCA 72 bp | AAATTGCAGCTCTTTGGAGCCTGTGTTTGGTCTTTCTaGCCCCTGTTCCTAACTAGTATTATGGACTGTTGC | + |
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Preference number: 3 (lower is better) Translates to: KLQLFGACVWSF*PLFLTSIMDCC Trigger: GCAACAGTCCATAATACTAGTTAGGAACAGGGGCCAGAAAGACCAAACACAGGCTCCAAAGAGCTGCAATTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209844.2 |
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| 3UTR CCA 72 bp | CTCAATTTCACGTTAAGTGTAAGCAGAGCTATCACTTaGCTAAGGTGTCATCAGGTCTCAGAGGTTCCAGAA | + |
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Preference number: 3 (lower is better) Translates to: LNFTLSVSRAIT*LRCHQVSEVPE Trigger: TTCTGGAACCTCTGAGACCTGATGACACCTTAGCCAAGTGATAGCTCTGCTTACACTTAACGTGAAATTGAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000094134.5 ENSMUST00000209368.2 ENSMUST00000209844.2 |
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| 3UTR TCA 72 bp | GTAAAGATTGAAGTCAGTGCAGATAGTGGTCAGAGCTaGGTGGATGTTGCCAAAGTTATATCTCAACTAGGC | + |
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Preference number: 3 (lower is better) Translates to: VKIEVSADSGQS*VDVAKVISQLG Trigger: GCCTAGTTGAGATATAACTTTGGCAACATCCACTCAGCTCTGACCACTATCTGCACTGACTTCAATCTTTAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000094134.5 ENSMUST00000209368.2 ENSMUST00000209844.2 |
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| CDS-3UTR CCA 90 bp | GAGCCAGGCTCTGGTCAAGGTCATGGTGTGGTTGGCTTTATGCAACCCCTGGGCCTCCTTCAGCCGGCCTaGGAGGTGCTCAATGAAGGA | + |
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Preference number: 4 (lower is better) Translates to: EPGSGQGHGVVGFMQPLGLLQPA*EVLNEG Trigger: TCCTTCATTGAGCACCTCCCAGGCCGGCTGAAGGAG...GCCCAGGGGTTGCATAAAGCCAACCACACCATGACCTTGACCAGAGCCTGGCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209368.2 |
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| CDS-3UTR TCA 90 bp | GCAATCACAGCCTATGGTGTAGACTCCACCCTCCAGGTAGATGAGAGCCAGGCTAACCCCTGGGCCTGCTaGTCTGGATACTGGGCTGTG | + |
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Preference number: 4 (lower is better) Translates to: AITAYGVDSTLQVDESQANPWAC*SGYWAV Trigger: CACAGCCCAGTATCCAGATCAGCAGGCCCAGGGGTT...AGCCTGGCTCTCATCTACCTGGAGGGTGGAGTCTACACCATAGGCTGTGATTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094134.5 ENSMUST00000209844.2 |
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| CDS-3UTR TCA 90 bp | ATGAGAGCCAGGCTCTGGTCAAGGTCATGGTGTGGTTGGCTTTATGCAACCCCTGCCAGTAGAGGATGCTaGAGTAGGGGAAGCGGCTGC | + |
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Preference number: 4 (lower is better) Translates to: MRARLWSRSWCGWLYATPASRGC*SRGSGC Trigger: GCAGCCGCTTCCCCTACTTCAGCATCCTCTACTGGC...AGGGGTTGCATAAAGCCAACCACACCATGACCTTGACCAGAGCCTGGCTCTCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000209368.2 |
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| CDS-3UTR TCA 90 bp | CTGCTGCAGCTTTATGAGTACTCAGTGTGGGCCCTGCAGAGACACAGACTGACAAACCCCTGGGCCTGCTaGTCTGGATACTGGGCTGTG | + |
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Preference number: 4 (lower is better) Translates to: LLQLYEYSVWALQRHRLTNPWAC*SGYWAV Trigger: CACAGCCCAGTATCCAGATCAGCAGGCCCAGGGGTT...TGTCAGTCTGTGTCTCTGCAGGGCCCACACTGAGTACTCATAAAGCTGCAGCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094134.5 ENSMUST00000209844.2 |
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| CDS-3UTR CCA 90 bp | GCAATCACAGCCTATGGTGTAGACTCCACCCTCCAGGTAGATGAGAGCCAGGCTCTCCTTCAGCCGGCCTaGGAGGTGCTCAATGAAGGA | + |
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Preference number: 4 (lower is better) Translates to: AITAYGVDSTLQVDESQALLQPA*EVLNEG Trigger: TCCTTCATTGAGCACCTCCCAGGCCGGCTGAAGGAG...AGCCTGGCTCTCATCTACCTGGAGGGTGGAGTCTACACCATAGGCTGTGATTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000094134.5 ENSMUST00000209368.2 ENSMUST00000209844.2 |
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| CDS-3UTR TCA 90 bp | GCTCTTGCCATCACTTGCTGTCACTGCAGTCCCATGTTCCTTGCTTCCACCTCTCTGGGAGGTGCTCAATaGAGGAACCATTGCCCAGCC | + |
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Preference number: 4 (lower is better) Translates to: ALAITCCHCSPMFLASTSLGGAQ*RNHCPA Trigger: GGCTGGGCAATGGTTCCTTCATTGAGCACCTCCCAG...AGAGGTGGAAGCAAGGAACATGGGACTGCAGTGACAGCAAGTGATGGCAAGAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209368.2 |
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| CDS-3UTR TCA 90 bp | ACAGCCTATGGTGTAGACTCCACCCTCCAGGTAGATGAGAGCCAGGCTCTGGTCTGGGCCAGAATGATGTaGTACTGGGCCACTTGTCCA | + |
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Preference number: 4 (lower is better) Translates to: TAYGVDSTLQVDESQALVWARMM*YWATCP Trigger: TGGACAAGTGGCCCAGTATCACATCATTCTGGCCCA...GACCAGAGCCTGGCTCTCATCTACCTGGAGGGTGGAGTCTACACCATAGGCTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000094134.5 ENSMUST00000209368.2 ENSMUST00000209844.2 |
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| CDS-3UTR GCA 90 bp | GCAATCACAGCCTATGGTGTAGACTCCACCCTCCAGGTAGATGAGAGCCAGGCTGGCAGTTGTCTGAGGTaGAGATGTGGCTCTGGCCAA | + |
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Preference number: 4 (lower is better) Translates to: AITAYGVDSTLQVDESQAGSCLR*RCGSGQ Trigger: TTGGCCAGAGCCACATCTGCACCTCAGACAACTGCC...AGCCTGGCTCTCATCTACCTGGAGGGTGGAGTCTACACCATAGGCTGTGATTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000094134.5 ENSMUST00000209368.2 ENSMUST00000209844.2 |
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| CDS-3UTR GCA 90 bp | CTGCTGCAGCTTTATGAGTACTCAGTGTGGGCCCTGCAGAGACACAGACTGACAAGTAGGGGAAGCGGCTaGAGGCAGTACAGGACAAGG | + |
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Preference number: 4 (lower is better) Translates to: LLQLYEYSVWALQRHRLTSRGSG*RQYRTR Trigger: CCTTGTCCTGTACTGCCTGCAGCCGCTTCCCCTACT...TGTCAGTCTGTGTCTCTGCAGGGCCCACACTGAGTACTCATAAAGCTGCAGCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094134.5 ENSMUST00000209844.2 |
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| CDS-3UTR TCA 90 bp | GTACTCAGTGTGGGCCCTGCAGAGACACAGACTGACATATACAGTTGTGACCTGCTGGGAGGTGCTCAATaGAGGAACCATTGCCCAGCC | + |
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Preference number: 4 (lower is better) Translates to: VLSVGPAETQTDIYSCDLLGGAQ*RNHCPA Trigger: GGCTGGGCAATGGTTCCTTCATTGAGCACCTCCCAG...CAGGTCACAACTGTATATGTCAGTCTGTGTCTCTGCAGGGCCCACACTGAGTAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094134.5 ENSMUST00000209844.2 |
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| CDS-3UTR GCA 90 bp | GAGTTTGAGGTTCAGCAGCAGAAAGGCAATCACAGCCTATGGTGTAGACTCCACAGTAGGGGAAGCGGCTaGAGGCAGTACAGGACAAGG | + |
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Preference number: 4 (lower is better) Translates to: EFEVQQQKGNHSLWCRLHSRGSG*RQYRTR Trigger: CCTTGTCCTGTACTGCCTGCAGCCGCTTCCCCTACT...GTGGAGTCTACACCATAGGCTGTGATTGCCTTTCTGCTGCTGAACCTCAAACTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000094134.5 ENSMUST00000209368.2 ENSMUST00000209844.2 |
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| CDS-3UTR CCA 90 bp | AGCTCTTGCCATCACTTGCTGTCACTGCAGTCCCATGTTCCTTGCTTCCACCTCCGTTCCTCCCATCCCTaGATGCCTTCTTTCAGGTTC | + |
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Preference number: 4 (lower is better) Translates to: SSCHHLLSLQSHVPCFHLRSSHP*MPSFRF Trigger: GAACCTGAAAGAAGGCATCCAGGGATGGGAGGAACG...GAGGTGGAAGCAAGGAACATGGGACTGCAGTGACAGCAAGTGATGGCAAGAGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209368.2 |
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| CDS-3UTR CCA 90 bp | GCTATCACTTGGCTAAGGTGTCATCAGGTCTCAGAGGTTCCAGAACACCAGTGGCTTAGTTGGGACTGCTaGAGACCAGGAAGAGCATGG | + |
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Preference number: 4 (lower is better) Translates to: AITWLRCHQVSEVPEHQWLSWDC*RPGRAW Trigger: CCATGCTCTTCCTGGTCTCCAGCAGTCCCAACTAAG...CCACTGGTGTTCTGGAACCTCTGAGACCTGATGACACCTTAGCCAAGTGATAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000094134.5 ENSMUST00000209368.2 ENSMUST00000209844.2 |
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| CDS-3UTR TCA 90 bp | CAGAGGTTCCAGAACACCAGTGGGATGAATAAGACATCAGAAAAGGTAAACTGGGCCAGTAGAGGATGCTaGAGTAGGGGAAGCGGCTGC | + |
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Preference number: 4 (lower is better) Translates to: QRFQNTSGMNKTSEKVNWASRGC*SRGSGC Trigger: GCAGCCGCTTCCCCTACTTCAGCATCCTCTACTGGC...CCAGTTTACCTTTTCTGATGTCTTATTCATCCCACTGGTGTTCTGGAACCTCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000094134.5 ENSMUST00000209368.2 ENSMUST00000209844.2 |
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| CDS-3UTR TCA 90 bp | GAGTTTGAGGTTCAGCAGCAGAAAGGCAATCACAGCCTATGGTGTAGACTCCACTGGGCCAGAATGATGTaGTACTGGGCCACTTGTCCA | + |
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Preference number: 4 (lower is better) Translates to: EFEVQQQKGNHSLWCRLHWARMM*YWATCP Trigger: TGGACAAGTGGCCCAGTATCACATCATTCTGGCCCA...GTGGAGTCTACACCATAGGCTGTGATTGCCTTTCTGCTGCTGAACCTCAAACTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000094134.5 ENSMUST00000209368.2 ENSMUST00000209844.2 |
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| CDS-3UTR TCA 90 bp | GTAAGCAGAGCTATCACTTGGCTAAGGTGTCATCAGGTCTCAGAGGTTCCAGAACTAGAGAGGGTTTCTTaGGAAGGGGACGGAGCTGTC | + |
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Preference number: 4 (lower is better) Translates to: VSRAITWLRCHQVSEVPELERVS*EGDGAV Trigger: GACAGCTCCGTCCCCTTCTCAAGAAACCCTCTCTAG...TTCTGGAACCTCTGAGACCTGATGACACCTTAGCCAAGTGATAGCTCTGCTTAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094134.5 ENSMUST00000209844.2 |
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| CDS-3UTR GCA 90 bp | GTAAGCAGAGCTATCACTTGGCTAAGGTGTCATCAGGTCTCAGAGGTTCCAGAAAGCCGGCCTGGGAGGTaGTCAATGAAGGAACCATTG | + |
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Preference number: 4 (lower is better) Translates to: VSRAITWLRCHQVSEVPESRPGR*SMKEPL Trigger: CAATGGTTCCTTCATTGAGCACCTCCCAGGCCGGCT...TTCTGGAACCTCTGAGACCTGATGACACCTTAGCCAAGTGATAGCTCTGCTTAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000094134.5 ENSMUST00000209368.2 ENSMUST00000209844.2 |
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| 3UTR CAA 72 bp | ACATGGTCAGAGCTAAGGAAGAGCTCTTGCCATCACTaGCTGTCACTGCAGTCCCATGTTCCTTGCTTCCAC | + |
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Preference number: 4 (lower is better) Translates to: TWSELRKSSCHH*LSLQSHVPCFH Trigger: GTGGAAGCAAGGAACATGGGACTGCAGTGACAGCAAGTGATGGCAAGAGCTCTTCCTTAGCTCTGACCATGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209368.2 |
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| CDS-3UTR TCA 90 bp | AAGCTTGAGTTTGAGGTTCAGCAGCAGAAAGGCAATCACAGCCTATGGTGTAGACTAGAGAGGGTTTCTTaGGAAGGGGACGGAGCTGTC | + |
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Preference number: 4 (lower is better) Translates to: KLEFEVQQQKGNHSLWCRLERVS*EGDGAV Trigger: GACAGCTCCGTCCCCTTCTCAAGAAACCCTCTCTAG...TCTACACCATAGGCTGTGATTGCCTTTCTGCTGCTGAACCTCAAACTCAAGCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094134.5 ENSMUST00000209844.2 |
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| CDS-3UTR CCA 90 bp | AGAGAGGGTTTCTTGAGAAGGGGACGGAGCTGTCTTCAACCCATCCTGGAGAAGCTGGCCAAAATGACATaGACATACAAAAGCAGGACC | + |
|
Preference number: 4 (lower is better) Translates to: REGFLRRGRSCLQPILEKLAKMT*TYKSRT Trigger: GGTCCTGCTTTTGTATGTCCATGTCATTTTGGCCAG...CTTCTCCAGGATGGGTTGAAGACAGCTCCGTCCCCTTCTCAAGAAACCCTCTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000209368.2 |
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| CDS-3UTR CCA 90 bp | ATGAGAGCCAGGCTCTGGTCAAGGTCATGGTGTGGTTGGCTTTATGCAACCCCTTGGCACTTCTTTTTCTaGCCAAATCACATCCAGTGC | + |
|
Preference number: 4 (lower is better) Translates to: MRARLWSRSWCGWLYATPWHFFF*PNHIQC Trigger: GCACTGGATGTGATTTGGCCAGAAAAAGAAGTGCCA...AGGGGTTGCATAAAGCCAACCACACCATGACCTTGACCAGAGCCTGGCTCTCAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000209368.2 |
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| 3UTR CAA 72 bp | GTAAATGCACACATGGTCAGAGCTAAGGAAGAGCTCTaGCCATCACTTGCTGTCACTGCAGTCCCATGTTCC | + |
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Preference number: 4 (lower is better) Translates to: VNAHMVRAKEEL*PSLAVTAVPCS Trigger: GGAACATGGGACTGCAGTGACAGCAAGTGATGGCAAGAGCTCTTCCTTAGCTCTGACCATGTGTGCATTTAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209368.2 |
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| CDS-3UTR TCA 90 bp | CCTGCAGAGACACAGACTGACATATACAGTTGTGACCTGACGCAGCCACTGTTCTGGCTCTGGCCAAAATaGCATGGACATACAAAAGCA | + |
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Preference number: 4 (lower is better) Translates to: PAETQTDIYSCDLTQPLFWLWPK*HGHTKA Trigger: TGCTTTTGTATGTCCATGTCATTTTGGCCAGAGCCA...GAACAGTGGCTGCGTCAGGTCACAACTGTATATGTCAGTCTGTGTCTCTGCAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000094134.5 ENSMUST00000209844.2 |
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| CDS-3UTR TCA 90 bp | GATAGGCATCTCAATTTCACGTTAAGTGTAAGCAGAGCTATCACTTGGCTAAGGCTGGGAGGTGCTCAATaGAGGAACCATTGCCCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: DRHLNFTLSVSRAITWLRLGGAQ*RNHCPA Trigger: GGCTGGGCAATGGTTCCTTCATTGAGCACCTCCCAG...CCTTAGCCAAGTGATAGCTCTGCTTACACTTAACGTGAAATTGAGATGCCTATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000094134.5 ENSMUST00000209368.2 ENSMUST00000209844.2 |
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| CDS-3UTR GCA 90 bp | CAGAACACCAGTGGGATGAATAAGACATCAGAAAAGGTAAACTGGATGGATGGAAGCACCAAGGCCCTGTaGAGCCAGGTGCTTGTGTTC | + |
|
Preference number: 4 (lower is better) Translates to: QNTSGMNKTSEKVNWMDGSTKAL*SQVLVF Trigger: GAACACAAGCACCTGGCTGCACAGGGCCTTGGTGCT...TCCATCCATCCAGTTTACCTTTTCTGATGTCTTATTCATCCCACTGGTGTTCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000094134.5 ENSMUST00000209368.2 ENSMUST00000209844.2 |
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| CDS-3UTR GCA 90 bp | GTAAGCAGAGCTATCACTTGGCTAAGGTGTCATCAGGTCTCAGAGGTTCCAGAACCTCCCATCCCTGGATaGCTTCTTTCAGGTTCCTTA | + |
|
Preference number: 4 (lower is better) Translates to: VSRAITWLRCHQVSEVPEPPIPG*LLSGSL Trigger: TAAGGAACCTGAAAGAAGGCATCCAGGGATGGGAGG...TTCTGGAACCTCTGAGACCTGATGACACCTTAGCCAAGTGATAGCTCTGCTTAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209368.2 |
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| CDS-3UTR CCA 90 bp | GTACTCAGTGTGGGCCCTGCAGAGACACAGACTGACATATACAGTTGTGACCTGCTGGCCAAAATGACATaGACATACAAAAGCAGGACC | + |
|
Preference number: 4 (lower is better) Translates to: VLSVGPAETQTDIYSCDLLAKMT*TYKSRT Trigger: GGTCCTGCTTTTGTATGTCCATGTCATTTTGGCCAG...CAGGTCACAACTGTATATGTCAGTCTGTGTCTCTGCAGGGCCCACACTGAGTAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000094134.5 ENSMUST00000209844.2 |
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| CDS-3UTR CCA 90 bp | CCTGCAGAGACACAGACTGACATATACAGTTGTGACCTGACGCAGCCACTGTTCTGGCACTTCTTTTTCTaGCCAAATCACATCCAGTGC | + |
|
Preference number: 4 (lower is better) Translates to: PAETQTDIYSCDLTQPLFWHFFF*PNHIQC Trigger: GCACTGGATGTGATTTGGCCAGAAAAAGAAGTGCCA...GAACAGTGGCTGCGTCAGGTCACAACTGTATATGTCAGTCTGTGTCTCTGCAGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000094134.5 ENSMUST00000209844.2 |
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| CDS-3UTR CCA 90 bp | GTACTCAGTGTGGGCCCTGCAGAGACACAGACTGACATATACAGTTGTGACCTGTGGCACTTCTTTTTCTaGCCAAATCACATCCAGTGC | + |
|
Preference number: 4 (lower is better) Translates to: VLSVGPAETQTDIYSCDLWHFFF*PNHIQC Trigger: GCACTGGATGTGATTTGGCCAGAAAAAGAAGTGCCA...CAGGTCACAACTGTATATGTCAGTCTGTGTCTCTGCAGGGCCCACACTGAGTAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000094134.5 ENSMUST00000209844.2 |
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| CDS-3UTR CCA 90 bp | GGGATGAATAAGACATCAGAAAAGGTAAACTGGATGGATGGACAGGAGGACAAACTCCTTCAGCCGGCCTaGGAGGTGCTCAATGAAGGA | + |
|
Preference number: 4 (lower is better) Translates to: GMNKTSEKVNWMDGQEDKLLQPA*EVLNEG Trigger: TCCTTCATTGAGCACCTCCCAGGCCGGCTGAAGGAG...TTTGTCCTCCTGTCCATCCATCCAGTTTACCTTTTCTGATGTCTTATTCATCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000094134.5 ENSMUST00000209368.2 ENSMUST00000209844.2 |
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| CDS-3UTR TCA 90 bp | CAGAGGTTCCAGAACACCAGTGGGATGAATAAGACATCAGAAAAGGTAAACTGGTGGGCCAGAATGATGTaGTACTGGGCCACTTGTCCA | + |
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Preference number: 4 (lower is better) Translates to: QRFQNTSGMNKTSEKVNWWARMM*YWATCP Trigger: TGGACAAGTGGCCCAGTATCACATCATTCTGGCCCA...CCAGTTTACCTTTTCTGATGTCTTATTCATCCCACTGGTGTTCTGGAACCTCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000094134.5 ENSMUST00000209368.2 ENSMUST00000209844.2 |
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| CDS-3UTR GCA 90 bp | AGAAATCTGCCAGATAGGCATCTCAATTTCACGTTAAGTGTAAGCAGAGCTATCAGTAGGGGAAGCGGCTaGAGGCAGTACAGGACAAGG | + |
|
Preference number: 4 (lower is better) Translates to: RNLPDRHLNFTLSVSRAISRGSG*RQYRTR Trigger: CCTTGTCCTGTACTGCCTGCAGCCGCTTCCCCTACT...GATAGCTCTGCTTACACTTAACGTGAAATTGAGATGCCTATCTGGCAGATTTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000094134.5 ENSMUST00000209368.2 ENSMUST00000209844.2 |
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| CDS-3UTR GCA 90 bp | AGAAATCTGCCAGATAGGCATCTCAATTTCACGTTAAGTGTAAGCAGAGCTATCAGCACCAAGGCCCTGTaGAGCCAGGTGCTTGTGTTC | + |
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Preference number: 4 (lower is better) Translates to: RNLPDRHLNFTLSVSRAISTKAL*SQVLVF Trigger: GAACACAAGCACCTGGCTGCACAGGGCCTTGGTGCT...GATAGCTCTGCTTACACTTAACGTGAAATTGAGATGCCTATCTGGCAGATTTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000094134.5 ENSMUST00000209368.2 ENSMUST00000209844.2 |
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| CDS-3UTR GCA 90 bp | TTCGGGTTAACCTTTTTGATTGGTACAGGATGTAGAAATCTGCCAGATAGGCATAGCACCAAGGCCCTGTaGAGCCAGGTGCTTGTGTTC | + |
|
Preference number: 4 (lower is better) Translates to: FGLTFLIGTGCRNLPDRHSTKAL*SQVLVF Trigger: GAACACAAGCACCTGGCTGCACAGGGCCTTGGTGCT...ATGCCTATCTGGCAGATTTCTACATCCTGTACCAATCAAAAAGGTTAACCCGAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000094134.5 ENSMUST00000209368.2 ENSMUST00000209844.2 |
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| CDS-3UTR GCA 90 bp | TTCGGGTTAACCTTTTTGATTGGTACAGGATGTAGAAATCTGCCAGATAGGCATAGCCGGCCTGGGAGGTaGTCAATGAAGGAACCATTG | + |
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Preference number: 4 (lower is better) Translates to: FGLTFLIGTGCRNLPDRHSRPGR*SMKEPL Trigger: CAATGGTTCCTTCATTGAGCACCTCCCAGGCCGGCT...ATGCCTATCTGGCAGATTTCTACATCCTGTACCAATCAAAAAGGTTAACCCGAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000094134.5 ENSMUST00000209368.2 ENSMUST00000209844.2 |
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| CDS-3UTR CCA 90 bp | CAGAACACCAGTGGGATGAATAAGACATCAGAAAAGGTAAACTGGATGGATGGACTTAGTTGGGACTGCTaGAGACCAGGAAGAGCATGG | + |
|
Preference number: 4 (lower is better) Translates to: QNTSGMNKTSEKVNWMDGLSWDC*RPGRAW Trigger: CCATGCTCTTCCTGGTCTCCAGCAGTCCCAACTAAG...TCCATCCATCCAGTTTACCTTTTCTGATGTCTTATTCATCCCACTGGTGTTCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000094134.5 ENSMUST00000209368.2 ENSMUST00000209844.2 |
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| CDS-3UTR GCA 90 bp | GTTATATCTCAACTAGGCTTCGGGTTAACCTTTTTGATTGGTACAGGATGTAGAGGCAGTTGTCTGAGGTaGAGATGTGGCTCTGGCCAA | + |
|
Preference number: 4 (lower is better) Translates to: VISQLGFGLTFLIGTGCRGSCLR*RCGSGQ Trigger: TTGGCCAGAGCCACATCTGCACCTCAGACAACTGCC...TCTACATCCTGTACCAATCAAAAAGGTTAACCCGAAGCCTAGTTGAGATATAAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000094134.5 ENSMUST00000209368.2 ENSMUST00000209844.2 |
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| CDS-3UTR CCA 90 bp | CTCTTTGGAGCCTGTGTTTGGTCTTTCTGGCCCCTGTTCCTAACTAGTATTATGCTGGCCAAAATGACATaGACATACAAAAGCAGGACC | + |
|
Preference number: 4 (lower is better) Translates to: LFGACVWSFWPLFLTSIMLAKMT*TYKSRT Trigger: GGTCCTGCTTTTGTATGTCCATGTCATTTTGGCCAG...CATAATACTAGTTAGGAACAGGGGCCAGAAAGACCAAACACAGGCTCCAAAGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000209844.2 |
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| CDS-3UTR CCA 90 bp | CATCCTGGAGAAGTAAATGCACACATGGTCAGAGCTAAGGAAGAGCTCTTGCCAGCTTACAGGTTGTACTaGAAAAGCCAATCCTTCCTT | + |
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Preference number: 4 (lower is better) Translates to: HPGEVNAHMVRAKEELLPAYRLY*KSQSFL Trigger: AAGGAAGGATTGGCTTTTCCAGTACAACCTGTAAGC...TGGCAAGAGCTCTTCCTTAGCTCTGACCATGTGTGCATTTACTTCTCCAGGATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209368.2 |
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| CDS-3UTR TCA 90 bp | GATAGGCATCTCAATTTCACGTTAAGTGTAAGCAGAGCTATCACTTGGCTAAGGTGGCTCTGGCCAAAATaGCATGGACATACAAAAGCA | + |
|
Preference number: 4 (lower is better) Translates to: DRHLNFTLSVSRAITWLRWLWPK*HGHTKA Trigger: TGCTTTTGTATGTCCATGTCATTTTGGCCAGAGCCA...CCTTAGCCAAGTGATAGCTCTGCTTACACTTAACGTGAAATTGAGATGCCTATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000094134.5 ENSMUST00000209368.2 ENSMUST00000209844.2 |
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| CDS-3UTR TCA 90 bp | TTCGGGTTAACCTTTTTGATTGGTACAGGATGTAGAAATCTGCCAGATAGGCATTGGCTCTGGCCAAAATaGCATGGACATACAAAAGCA | + |
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Preference number: 4 (lower is better) Translates to: FGLTFLIGTGCRNLPDRHWLWPK*HGHTKA Trigger: TGCTTTTGTATGTCCATGTCATTTTGGCCAGAGCCA...ATGCCTATCTGGCAGATTTCTACATCCTGTACCAATCAAAAAGGTTAACCCGAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000094134.5 ENSMUST00000209368.2 ENSMUST00000209844.2 |
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| CDS GCA 90 bp | TCTTCCAGCACCAAGGCCCTGTGCAGCCAGGTGCTTGTGTTCCTGTaGTCGCGACTTGTGTGGCCCTCCTTCAGCCGGCCTGGGAGGTGC | + |
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Preference number: 5 (lower is better) Translates to: SSSTKALCSQVLVFL*SRLVWPSFSRPGRC Trigger: GCACCTCCCAGGCCGGCTGAAGGAGGGCCACACAAGTCGCGAGCACAGGAACACAAGCACCTGGCTGCACAGGGCCTTGGTGCTGGAAGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000094134.5 ENSMUST00000209368.2 ENSMUST00000209844.2 ENSMUST00000211502.2 |
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| CDS GCA 90 bp | GGGTGGGGCTCAGTTCTTCCAGCACCAAGGCCCTGTGCAGCCAGGTaGTTGTGTTCCTGTGCTCGCGACTTGTGTGGCCCTCCTTCAGCC | + |
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Preference number: 5 (lower is better) Translates to: GWGSVLPAPRPCAAR*LCSCARDLCGPPSA Trigger: GGCTGAAGGAGGGCCACACAAGTCGCGAGCACAGGAACACAAGCACCTGGCTGCACAGGGCCTTGGTGCTGGAAGAACTGAGCCCCACCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000094134.5 ENSMUST00000209368.2 ENSMUST00000209844.2 |
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| CDS CCA 90 bp | GCCCTGTGCAGCCAGGTGCTTGTGTTCCTGTGCTCGCGACTTGTGTaGCCCTCCTTCAGCCGGCCTGGGAGGTGCTCAATGAAGGAACCA | + |
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Preference number: 5 (lower is better) Translates to: ALCSQVLVFLCSRLV*PSFSRPGRCSMKEP Trigger: TGGTTCCTTCATTGAGCACCTCCCAGGCCGGCTGAAGGAGGGCCACACAAGTCGCGAGCACAGGAACACAAGCACCTGGCTGCACAGGGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000094134.5 ENSMUST00000209368.2 ENSMUST00000209844.2 ENSMUST00000211502.2 |
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| CDS-3UTR CAA 90 bp | GGTGTAGACTCCACCCTCCAGGTAGATGAGAGCCAGGCTCTGGTCAAGGTCATGTCCTGTGCTCGCGACTaGTGTGGCCCTCCTTCAGCC | + |
|
Preference number: 5 (lower is better) Translates to: GVDSTLQVDESQALVKVMSCARD*CGPPSA Trigger: GGCTGAAGGAGGGCCACACAAGTCGCGAGCACAGGA...CATGACCTTGACCAGAGCCTGGCTCTCATCTACCTGGAGGGTGGAGTCTACACC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000094134.5 ENSMUST00000209368.2 ENSMUST00000209844.2 |
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| CDS-3UTR CAA 90 bp | ACAGCCTATGGTGTAGACTCCACCCTCCAGGTAGATGAGAGCCAGGCTCTGGTCTCCTGTGCTCGCGACTaGTGTGGCCCTCCTTCAGCC | + |
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Preference number: 5 (lower is better) Translates to: TAYGVDSTLQVDESQALVSCARD*CGPPSA Trigger: GGCTGAAGGAGGGCCACACAAGTCGCGAGCACAGGA...GACCAGAGCCTGGCTCTCATCTACCTGGAGGGTGGAGTCTACACCATAGGCTGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000094134.5 ENSMUST00000209368.2 ENSMUST00000209844.2 |
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| CDS CCA 90 bp | TGTGTTCCTGTGCTCGCGACTTGTGTGGCCCTCCTTCAGCCGGCCTaGGAGGTGCTCAATGAAGGAACCATTGCCCAGCCAGTAGAGGAT | + |
|
Preference number: 5 (lower is better) Translates to: CVPVLATCVALLQPA*EVLNEGTIAQPVED Trigger: ATCCTCTACTGGCTGGGCAATGGTTCCTTCATTGAGCACCTCCCAGGCCGGCTGAAGGAGGGCCACACAAGTCGCGAGCACAGGAACACA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000094134.5 ENSMUST00000209368.2 ENSMUST00000209844.2 ENSMUST00000211502.2 |
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| CDS CCA 90 bp | GTCCAGGATCCACAAACAAACAGGAGAAGTTGGTACTTCGTAGGGTaGGGCTCAGTTCTTCCAGCACCAAGGCCCTGTGCAGCCAGGTGC | + |
|
Preference number: 5 (lower is better) Translates to: VQDPQTNRRSWYFVG*GSVLPAPRPCAARC Trigger: GCACCTGGCTGCACAGGGCCTTGGTGCTGGAAGAACTGAGCCCCACCCTACGAAGTACCAACTTCTCCTGTTTGTTTGTGGATCCTGGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000094134.5 ENSMUST00000209368.2 ENSMUST00000209844.2 |
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| CDS TCA 90 bp | AAGGGGACGGAGCTGTCTTCAACCCATCCCAGAGCTGGGCCAGAATaGTGTGATACTGGGCCACTTGTCCAGGATCCACAAACAAACAGG | + |
|
Preference number: 5 (lower is better) Translates to: KGTELSSTHPRAGPE*CDTGPLVQDPQTNR Trigger: CCTGTTTGTTTGTGGATCCTGGACAAGTGGCCCAGTATCACATCATTCTGGCCCAGCTCTGGGATGGGTTGAAGACAGCTCCGTCCCCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094134.5 ENSMUST00000209844.2 |
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| CDS CCA 90 bp | GATACTGGGCCACTTGTCCAGGATCCACAAACAAACAGGAGAAGTTaGTACTTCGTAGGGTGGGGCTCAGTTCTTCCAGCACCAAGGCCC | + |
|
Preference number: 5 (lower is better) Translates to: DTGPLVQDPQTNRRS*YFVGWGSVLPAPRP Trigger: GGGCCTTGGTGCTGGAAGAACTGAGCCCCACCCTACGAAGTACCAACTTCTCCTGTTTGTTTGTGGATCCTGGACAAGTGGCCCAGTATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000094134.5 ENSMUST00000209368.2 ENSMUST00000209844.2 |
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| CDS-3UTR CAA 90 bp | GTTAAGTGTAAGCAGAGCTATCACTTGGCTAAGGTGTCATCAGGTCTCAGAGGTTCCTGTGCTCGCGACTaGTGTGGCCCTCCTTCAGCC | + |
|
Preference number: 5 (lower is better) Translates to: VKCKQSYHLAKVSSGLRGSCARD*CGPPSA Trigger: GGCTGAAGGAGGGCCACACAAGTCGCGAGCACAGGA...ACCTCTGAGACCTGATGACACCTTAGCCAAGTGATAGCTCTGCTTACACTTAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000094134.5 ENSMUST00000209368.2 ENSMUST00000209844.2 |
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| CDS TCA 90 bp | CCTGGATGCCTTCTTTCAGGTTCCTTACCCAGAGCTGGGCCAGAATaGTGTGATACTGGGCCACTTGTCCAGGATCCACAAACAAACAGG | + |
|
Preference number: 5 (lower is better) Translates to: PGCLLSGSLPRAGPE*CDTGPLVQDPQTNR Trigger: CCTGTTTGTTTGTGGATCCTGGACAAGTGGCCCAGTATCACATCATTCTGGCCCAGCTCTGGGTAAGGAACCTGAAAGAAGGCATCCAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209368.2 |
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| CDS CCA 90 bp | GAAGCGGCTGCAGGCAGTACAGGACAAGGTCAGAGTTCCATTCAGTaGCACTTCTTTTTCTGGCCAAATCACATCCAGTGCTGGGTACTG | + |
|
Preference number: 5 (lower is better) Translates to: EAAAGSTGQGQSSIQ*HFFFWPNHIQCWVL Trigger: CAGTACCCAGCACTGGATGTGATTTGGCCAGAAAAAGAAGTGCCACTGAATGGAACTCTGACCTTGTCCTGTACTGCCTGCAGCCGCTTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000094134.5 ENSMUST00000209368.2 ENSMUST00000209844.2 ENSMUST00000211502.2 |
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| CDS-3UTR CAA 90 bp | ATGAGAGCCAGGCTCTGGTCAAGGTCATGGTGTGGTTGGCTTTATGCAACCCCTTTAAGACAGTGGCAGTaGTCTGAGGTGCAGATGTGG | + |
|
Preference number: 5 (lower is better) Translates to: MRARLWSRSWCGWLYATPLRQWQ*SEVQMW Trigger: CCACATCTGCACCTCAGACAACTGCCACTGTCTTAA...AGGGGTTGCATAAAGCCAACCACACCATGACCTTGACCAGAGCCTGGCTCTCAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209368.2 |
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| CDS CCA 90 bp | TCCATTCAGTGGCACTTCTTTTTCTGGCCAAATCACATCCAGTGCTaGGTACTGCTTAGTTGGGACTGCTGGAGACCAGGAAGAGCATGG | + |
|
Preference number: 5 (lower is better) Translates to: SIQWHFFFWPNHIQC*VLLSWDCWRPGRAW Trigger: CCATGCTCTTCCTGGTCTCCAGCAGTCCCAACTAAGCAGTACCCAGCACTGGATGTGATTTGGCCAGAAAAAGAAGTGCCACTGAATGGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000094134.5 ENSMUST00000209368.2 ENSMUST00000209844.2 ENSMUST00000211502.2 |
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| CDS-3UTR CAA 90 bp | AAGGGGAAATTGCAGCTCTTTGGAGCCTGTGTTTGGTCTTTCTGGCCCCTGTTCTTAAGACAGTGGCAGTaGTCTGAGGTGCAGATGTGG | + |
|
Preference number: 5 (lower is better) Translates to: KGKLQLFGACVWSFWPLFLRQWQ*SEVQMW Trigger: CCACATCTGCACCTCAGACAACTGCCACTGTCTTAA...GAACAGGGGCCAGAAAGACCAAACACAGGCTCCAAAGAGCTGCAATTTCCCCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000209844.2 |
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| CDS TCA 90 bp | ATGCCTTCTTTCAGGTTCCTTACCCAGAGCTGGGCCAGAATGATGTaGTACTGGGCCACTTGTCCAGGATCCACAAACAAACAGGAGAAG | + |
|
Preference number: 5 (lower is better) Translates to: MPSFRFLTQSWARMM*YWATCPGSTNKQEK Trigger: CTTCTCCTGTTTGTTTGTGGATCCTGGACAAGTGGCCCAGTATCACATCATTCTGGCCCAGCTCTGGGTAAGGAACCTGAAAGAAGGCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209368.2 |
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| CDS GCA 90 bp | AGTGGCACTTCTTTTTCTGGCCAAATCACATCCAGTGCTGGGTACTaGTTAGTTGGGACTGCTGGAGACCAGGAAGAGCATGGGTCTTTT | + |
|
Preference number: 5 (lower is better) Translates to: SGTSFSGQITSSAGY*LVGTAGDQEEHGSF Trigger: AAAAGACCCATGCTCTTCCTGGTCTCCAGCAGTCCCAACTAAGCAGTACCCAGCACTGGATGTGATTTGGCCAGAAAAAGAAGTGCCACT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000094134.5 ENSMUST00000209368.2 ENSMUST00000209844.2 ENSMUST00000211502.2 |
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| CDS GCA 90 bp | AGTTCCATTCAGTGGCACTTCTTTTTCTGGCCAAATCACATCCAGTaGTGGGTACTGCTTAGTTGGGACTGCTGGAGACCAGGAAGAGCA | + |
|
Preference number: 5 (lower is better) Translates to: SSIQWHFFFWPNHIQ*WVLLSWDCWRPGRA Trigger: TGCTCTTCCTGGTCTCCAGCAGTCCCAACTAAGCAGTACCCAGCACTGGATGTGATTTGGCCAGAAAAAGAAGTGCCACTGAATGGAACT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000094134.5 ENSMUST00000209368.2 ENSMUST00000209844.2 ENSMUST00000211502.2 |
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| CDS-3UTR CAA 90 bp | GCTCTTGCCATCACTTGCTGTCACTGCAGTCCCATGTTCCTTGCTTCCACCTCTAAGAGCATGGGTCTTTaGAGCTTCCAGTTAAGACAG | + |
|
Preference number: 5 (lower is better) Translates to: ALAITCCHCSPMFLASTSKSMGL*SFQLRQ Trigger: CTGTCTTAACTGGAAGCTCAAAAGACCCATGCTCTT...AGAGGTGGAAGCAAGGAACATGGGACTGCAGTGACAGCAAGTGATGGCAAGAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209368.2 |
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| CDS-3UTR CAA 90 bp | AAGCTTGAGTTTGAGGTTCAGCAGCAGAAAGGCAATCACAGCCTATGGTGTAGAGCTAGAGAGGGTTTCTaGAGAAGGGGACGGAGCTGT | + |
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Preference number: 5 (lower is better) Translates to: KLEFEVQQQKGNHSLWCRAREGF*RRGRSC Trigger: ACAGCTCCGTCCCCTTCTCAAGAAACCCTCTCTAGC...TCTACACCATAGGCTGTGATTGCCTTTCTGCTGCTGAACCTCAAACTCAAGCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094134.5 ENSMUST00000209844.2 |
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| CDS-3UTR CAA 90 bp | GATAGGCATCTCAATTTCACGTTAAGTGTAAGCAGAGCTATCACTTGGCTAAGGTTAAGACAGTGGCAGTaGTCTGAGGTGCAGATGTGG | + |
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Preference number: 5 (lower is better) Translates to: DRHLNFTLSVSRAITWLRLRQWQ*SEVQMW Trigger: CCACATCTGCACCTCAGACAACTGCCACTGTCTTAA...CCTTAGCCAAGTGATAGCTCTGCTTACACTTAACGTGAAATTGAGATGCCTATC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000094134.5 ENSMUST00000209368.2 ENSMUST00000209844.2 |
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| CDS-3UTR CAA 90 bp | TTGATTGGTACAGGATGTAGAAATCTGCCAGATAGGCATCTCAATTTCACGTTAGCTAGAGAGGGTTTCTaGAGAAGGGGACGGAGCTGT | + |
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Preference number: 5 (lower is better) Translates to: LIGTGCRNLPDRHLNFTLAREGF*RRGRSC Trigger: ACAGCTCCGTCCCCTTCTCAAGAAACCCTCTCTAGC...TAACGTGAAATTGAGATGCCTATCTGGCAGATTTCTACATCCTGTACCAATCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094134.5 ENSMUST00000209844.2 |
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| CDS-3UTR CAA 90 bp | GATAGGCATCTCAATTTCACGTTAAGTGTAAGCAGAGCTATCACTTGGCTAAGGAAGAGCATGGGTCTTTaGAGCTTCCAGTTAAGACAG | + |
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Preference number: 5 (lower is better) Translates to: DRHLNFTLSVSRAITWLRKSMGL*SFQLRQ Trigger: CTGTCTTAACTGGAAGCTCAAAAGACCCATGCTCTT...CCTTAGCCAAGTGATAGCTCTGCTTACACTTAACGTGAAATTGAGATGCCTATC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000094134.5 ENSMUST00000209368.2 ENSMUST00000209844.2 |
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| CDS CAA 90 bp | TGGGGCTCAGTTCTTCCAGCACCAAGGCCCTGTGCAGCCAGGTGCTaGTGTTCCTGTGCTCGCGACTTGTGTGGCCCTCCTTCAGCCGGC | + |
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Preference number: 6 (lower is better) Translates to: WGSVLPAPRPCAARC*CSCARDLCGPPSAG Trigger: GCCGGCTGAAGGAGGGCCACACAAGTCGCGAGCACAGGAACACAAGCACCTGGCTGCACAGGGCCTTGGTGCTGGAAGAACTGAGCCCCA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000094134.5 ENSMUST00000209368.2 ENSMUST00000209844.2 ENSMUST00000211502.2 |
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| CDS CCA 72 bp | GTGCTCGCGACTTGTGTGGCCCTCCTTCAGCCGGCCTaGGAGGTGCTCAATGAAGGAACCATTGCCCAGCCA | + |
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Preference number: 6 (lower is better) Translates to: VLATCVALLQPA*EVLNEGTIAQP Trigger: TGGCTGGGCAATGGTTCCTTCATTGAGCACCTCCCAGGCCGGCTGAAGGAGGGCCACACAAGTCGCGAGCAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000094134.5 ENSMUST00000209368.2 ENSMUST00000209844.2 ENSMUST00000211502.2 |
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| CDS CCA 72 bp | AGCCAGGTGCTTGTGTTCCTGTGCTCGCGACTTGTGTaGCCCTCCTTCAGCCGGCCTGGGAGGTGCTCAATG | + |
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Preference number: 6 (lower is better) Translates to: SQVLVFLCSRLV*PSFSRPGRCSM Trigger: CATTGAGCACCTCCCAGGCCGGCTGAAGGAGGGCCACACAAGTCGCGAGCACAGGAACACAAGCACCTGGCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000094134.5 ENSMUST00000209368.2 ENSMUST00000209844.2 ENSMUST00000211502.2 |
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| CDS CAA 72 bp | GTTCTTCCAGCACCAAGGCCCTGTGCAGCCAGGTGCTaGTGTTCCTGTGCTCGCGACTTGTGTGGCCCTCCT | + |
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Preference number: 6 (lower is better) Translates to: VLPAPRPCAARC*CSCARDLCGPP Trigger: AGGAGGGCCACACAAGTCGCGAGCACAGGAACACAAGCACCTGGCTGCACAGGGCCTTGGTGCTGGAAGAAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000094134.5 ENSMUST00000209368.2 ENSMUST00000209844.2 ENSMUST00000211502.2 |
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| CDS GCA 72 bp | TCAGTTCTTCCAGCACCAAGGCCCTGTGCAGCCAGGTaGTTGTGTTCCTGTGCTCGCGACTTGTGTGGCCCT | + |
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Preference number: 6 (lower is better) Translates to: SVLPAPRPCAAR*LCSCARDLCGP Trigger: AGGGCCACACAAGTCGCGAGCACAGGAACACAAGCACCTGGCTGCACAGGGCCTTGGTGCTGGAAGAACTGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000094134.5 ENSMUST00000209368.2 ENSMUST00000209844.2 ENSMUST00000211502.2 |
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| CDS GCA 72 bp | CCTTCCCCAGGTAGTAGCGTTCCTCCCATCCCTGGATaGCTTCTTTCAGGTTCCTTACCCAGAGCTGGGCCA | + |
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Preference number: 6 (lower is better) Translates to: PSPGSSVPPIPG*LLSGSLPRAGP Trigger: TGGCCCAGCTCTGGGTAAGGAACCTGAAAGAAGGCATCCAGGGATGGGAGGAACGCTACTACCTGGGGAAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209368.2 |
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| CDS TCA 72 bp | GATCTGGATACTGGGCTGTGGCTAGAGAGGGTTTCTTaGGAAGGGGACGGAGCTGTCTTCAACCCATCCCAG | + |
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Preference number: 6 (lower is better) Translates to: DLDTGLWLERVS*EGDGAVFNPSQ Trigger: CTGGGATGGGTTGAAGACAGCTCCGTCCCCTTCTCAAGAAACCCTCTCTAGCCACAGCCCAGTATCCAGATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094134.5 ENSMUST00000209844.2 |
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| CDS TCA 72 bp | GAGCTGTCTTCAACCCATCCCAGAGCTGGGCCAGAATaGTGTGATACTGGGCCACTTGTCCAGGATCCACAA | + |
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Preference number: 6 (lower is better) Translates to: ELSSTHPRAGPE*CDTGPLVQDPQ Trigger: TTGTGGATCCTGGACAAGTGGCCCAGTATCACATCATTCTGGCCCAGCTCTGGGATGGGTTGAAGACAGCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094134.5 ENSMUST00000209844.2 |
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| CDS CCA 72 bp | TGGCCAAATCACATCCAGTGCTGGGTACTGCTTAGTTaGGACTGCTGGAGACCAGGAAGAGCATGGGTCTTT | + |
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Preference number: 6 (lower is better) Translates to: WPNHIQCWVLLS*DCWRPGRAWVF Trigger: AAAGACCCATGCTCTTCCTGGTCTCCAGCAGTCCCAACTAAGCAGTACCCAGCACTGGATGTGATTTGGCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000094134.5 ENSMUST00000209368.2 ENSMUST00000209844.2 ENSMUST00000211502.2 |
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| CDS CAA 72 bp | GCCACTTGTCCAGGATCCACAAACAAACAGGAGAAGTaGGTACTTCGTAGGGTGGGGCTCAGTTCTTCCAGC | + |
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Preference number: 6 (lower is better) Translates to: ATCPGSTNKQEK*VLRRVGLSSSS Trigger: GCTGGAAGAACTGAGCCCCACCCTACGAAGTACCAACTTCTCCTGTTTGTTTGTGGATCCTGGACAAGTGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000094134.5 ENSMUST00000209368.2 ENSMUST00000209844.2 |
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| CDS TCA 72 bp | CTTCTTTCAGGTTCCTTACCCAGAGCTGGGCCAGAATaGTGTGATACTGGGCCACTTGTCCAGGATCCACAA | + |
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Preference number: 6 (lower is better) Translates to: LLSGSLPRAGPE*CDTGPLVQDPQ Trigger: TTGTGGATCCTGGACAAGTGGCCCAGTATCACATCATTCTGGCCCAGCTCTGGGTAAGGAACCTGAAAGAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209368.2 |
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| CDS GCA 72 bp | CAGTGGCACTTCTTTTTCTGGCCAAATCACATCCAGTaGTGGGTACTGCTTAGTTGGGACTGCTGGAGACCA | + |
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Preference number: 6 (lower is better) Translates to: QWHFFFWPNHIQ*WVLLSWDCWRP Trigger: TGGTCTCCAGCAGTCCCAACTAAGCAGTACCCAGCACTGGATGTGATTTGGCCAGAAAAAGAAGTGCCACTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000094134.5 ENSMUST00000209368.2 ENSMUST00000209844.2 ENSMUST00000211502.2 |
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| CDS CCA 72 bp | AAGAGCATGGGTCTTTTGAGCTTCCAGTTAAGACAGTaGCAGTTGTCTGAGGTGCAGATGTGGCTCTGGCCA | + |
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Preference number: 6 (lower is better) Translates to: KSMGLLSFQLRQ*QLSEVQMWLWP Trigger: TGGCCAGAGCCACATCTGCACCTCAGACAACTGCCACTGTCTTAACTGGAAGCTCAAAAGACCCATGCTCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000094134.5 ENSMUST00000209368.2 ENSMUST00000209844.2 ENSMUST00000211502.2 |
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| CDS CCA 72 bp | TGGCACTTCTTTTTCTGGCCAAATCACATCCAGTGCTaGGTACTGCTTAGTTGGGACTGCTGGAGACCAGGA | + |
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Preference number: 6 (lower is better) Translates to: WHFFFWPNHIQC*VLLSWDCWRPG Trigger: TCCTGGTCTCCAGCAGTCCCAACTAAGCAGTACCCAGCACTGGATGTGATTTGGCCAGAAAAAGAAGTGCCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000094134.5 ENSMUST00000209368.2 ENSMUST00000209844.2 ENSMUST00000211502.2 |
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| CDS CCA 72 bp | CCACTTGTCCAGGATCCACAAACAAACAGGAGAAGTTaGTACTTCGTAGGGTGGGGCTCAGTTCTTCCAGCA | + |
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Preference number: 6 (lower is better) Translates to: PLVQDPQTNRRS*YFVGWGSVLPA Trigger: TGCTGGAAGAACTGAGCCCCACCCTACGAAGTACCAACTTCTCCTGTTTGTTTGTGGATCCTGGACAAGTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000094134.5 ENSMUST00000209368.2 ENSMUST00000209844.2 |
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| CDS CAA 72 bp | TTGGGACTGCTGGAGACCAGGAAGAGCATGGGTCTTTaGAGCTTCCAGTTAAGACAGTGGCAGTTGTCTGAG | + |
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Preference number: 6 (lower is better) Translates to: LGLLETRKSMGL*SFQLRQWQLSE Trigger: CTCAGACAACTGCCACTGTCTTAACTGGAAGCTCAAAAGACCCATGCTCTTCCTGGTCTCCAGCAGTCCCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000094134.5 ENSMUST00000209368.2 ENSMUST00000209844.2 ENSMUST00000211502.2 |
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| CDS CAA 72 bp | CCAGAGCTGGGCCAGAATGATGTGATACTGGGCCACTaGTCCAGGATCCACAAACAAACAGGAGAAGTTGGT | + |
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Preference number: 6 (lower is better) Translates to: PELGQNDVILGH*SRIHKQTGEVG Trigger: ACCAACTTCTCCTGTTTGTTTGTGGATCCTGGACAAGTGGCCCAGTATCACATCATTCTGGCCCAGCTCTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000094134.5 ENSMUST00000209368.2 ENSMUST00000209844.2 |
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| CDS TCA 72 bp | CAGTTGTCTGAGGTGCAGATGTGGCTCTGGCCAAAATaGCATGGACATACAAAAGCAGGACCCACCAAGAAC | + |
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Preference number: 6 (lower is better) Translates to: QLSEVQMWLWPK*HGHTKAGPTKN Trigger: GTTCTTGGTGGGTCCTGCTTTTGTATGTCCATGTCATTTTGGCCAGAGCCACATCTGCACCTCAGACAACTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000094134.5 ENSMUST00000209368.2 ENSMUST00000209844.2 ENSMUST00000211502.2 |
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| CDS GCA 72 bp | TCTTTTTCTGGCCAAATCACATCCAGTGCTGGGTACTaGTTAGTTGGGACTGCTGGAGACCAGGAAGAGCAT | + |
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Preference number: 6 (lower is better) Translates to: SFSGQITSSAGY*LVGTAGDQEEH Trigger: ATGCTCTTCCTGGTCTCCAGCAGTCCCAACTAAGCAGTACCCAGCACTGGATGTGATTTGGCCAGAAAAAGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000094134.5 ENSMUST00000209368.2 ENSMUST00000209844.2 ENSMUST00000211502.2 |
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| CDS CCA 72 bp | GCAGGCAGTACAGGACAAGGTCAGAGTTCCATTCAGTaGCACTTCTTTTTCTGGCCAAATCACATCCAGTGC | + |
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Preference number: 6 (lower is better) Translates to: AGSTGQGQSSIQ*HFFFWPNHIQC Trigger: GCACTGGATGTGATTTGGCCAGAAAAAGAAGTGCCACTGAATGGAACTCTGACCTTGTCCTGTACTGCCTGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000094134.5 ENSMUST00000209368.2 ENSMUST00000209844.2 ENSMUST00000211502.2 |
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