Pregenerated sensors for IL17RE (Mus musculus)
Ensembl gene IDs: ENSMUSG00000043088Ensembl transcript IDs: ENSMUST00000058548.14, ENSMUST00000203281.3, ENSMUST00000203661.3, ENSMUST00000204774.3
Found 231 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TGCAGGCGGTGCTGGGACCCGCACAGTTCCACAGGAGCAGCACTGTaGCCTGCTCCCGCGCCACGCGCTCCCGCGCTGCCCAAAGCCACG | + |
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Preference number: 1 (lower is better) Translates to: CRRCWDPHSSTGAAL*PAPAPRAPALPKAT Trigger: CGTGGCTTTGGGCAGCGCGGGAGCGCGTGGCGCGGGAGCAGGGCACAGTGCTGCTCCTGTGGAACTGTGCGGGTCCCAGCACCGCCTGCA 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203281.3 |
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| 3UTR GCA 90 bp | CAGGAGCAGCACTGTGCCCTGCTCCCGCGCCACGCGCTCCCGCGCTaGCCAAAGCCACGGCAGTGGTCCAATGCGTGCTACGTGCGTCCC | + |
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Preference number: 1 (lower is better) Translates to: QEQHCALLPRHALPR*PKPRQWSNACYVRP Trigger: GGGACGCACGTAGCACGCATTGGACCACTGCCGTGGCTTTGGGCAGCGCGGGAGCGCGTGGCGCGGGAGCAGGGCACAGTGCTGCTCCTG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203281.3 |
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| 3UTR CCA 90 bp | CAGTGCTCTCAGCAGGCGCGGCAGGTCACGAAGCAGGCGGTAGCGTaGCAGAGCGCGCAGCGGCCGGGGGATGTCACCTTTGGCGCAGAG | + |
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Preference number: 1 (lower is better) Translates to: QCSQQARQVTKQAVA*QSAQRPGDVTFGAE Trigger: CTCTGCGCCAAAGGTGACATCCCCCGGCCGCTGCGCGCTCTGCCACGCTACCGCCTGCTTCGTGACCTGCCGCGCCTGCTGAGAGCACTG 70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000203281.3 |
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| 3UTR GCA 90 bp | AGCGGACGTGGAGCAGCGCACAACAAGGTGCGAAGGGACGCAGCCTaGGGGTCACCGCTGCAGGCGGTGCTGGGACCCGCACAGTTCCAC | + |
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Preference number: 1 (lower is better) Translates to: SGRGAAHNKVRRDAA*GSPLQAVLGPAQFH Trigger: GTGGAACTGTGCGGGTCCCAGCACCGCCTGCAGCGGTGACCCGCAGGCTGCGTCCCTTCGCACCTTGTTGTGCGCTGCTCCACGTCCGCT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203281.3 |
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| 3UTR TCA 90 bp | GAGCGCGCAGCGGCCGGGGGATGTCACCTTTGGCGCAGAGGCGACTaGAGTAGGCGAGCAGCAGCGGACGTGGAGCAGCGCACAACAAGG | + |
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Preference number: 1 (lower is better) Translates to: ERAAAGGCHLWRRGD*SRRAAADVEQRTTR Trigger: CCTTGTTGTGCGCTGCTCCACGTCCGCTGCTGCTCGCCTACTTCAGTCGCCTCTGCGCCAAAGGTGACATCCCCCGGCCGCTGCGCGCTC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000203281.3 |
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| 3UTR GCA 90 bp | GCGCCACGCGCTCCCGCGCTGCCCAAAGCCACGGCAGTGGTCCAATaGGTGCTACGTGCGTCCCTTCCCAGAGATCCACGATCACGTCGC | + |
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Preference number: 1 (lower is better) Translates to: APRAPALPKATAVVQ*VLRASLPRDPRSRR Trigger: GCGACGTGATCGTGGATCTCTGGGAAGGGACGCACGTAGCACGCATTGGACCACTGCCGTGGCTTTGGGCAGCGCGGGAGCGCGTGGCGC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203281.3 |
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| 3UTR CCA 90 bp | CTGCTCCCGCGCCACGCGCTCCCGCGCTGCCCAAAGCCACGGCAGTaGTCCAATGCGTGCTACGTGCGTCCCTTCCCAGAGATCCACGAT | + |
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Preference number: 1 (lower is better) Translates to: LLPRHALPRCPKPRQ*SNACYVRPFPEIHD Trigger: ATCGTGGATCTCTGGGAAGGGACGCACGTAGCACGCATTGGACCACTGCCGTGGCTTTGGGCAGCGCGGGAGCGCGTGGCGCGGGAGCAG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203281.3 |
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| 3UTR GCA 90 bp | CACGCGCTCCCGCGCTGCCCAAAGCCACGGCAGTGGTCCAATGCGTaGTACGTGCGTCCCTTCCCAGAGATCCACGATCACGTCGCGTCC | + |
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Preference number: 1 (lower is better) Translates to: HALPRCPKPRQWSNA*YVRPFPEIHDHVAS Trigger: GGACGCGACGTGATCGTGGATCTCTGGGAAGGGACGCACGTAGCACGCATTGGACCACTGCCGTGGCTTTGGGCAGCGCGGGAGCGCGTG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203281.3 |
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| 3UTR GCA 90 bp | TCCCGCGCTGCCCAAAGCCACGGCAGTGGTCCAATGCGTGCTACGTaGGTCCCTTCCCAGAGATCCACGATCACGTCGCGTCCACCTCCC | + |
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Preference number: 1 (lower is better) Translates to: SRAAQSHGSGPMRAT*VPSQRSTITSRPPP Trigger: GGGAGGTGGACGCGACGTGATCGTGGATCTCTGGGAAGGGACGCACGTAGCACGCATTGGACCACTGCCGTGGCTTTGGGCAGCGCGGGA 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203281.3 |
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| 3UTR CCA 90 bp | ACCTTTGGCGCAGAGGCGACTGAAGTAGGCGAGCAGCAGCGGACGTaGAGCAGCGCACAACAAGGTGCGAAGGGACGCAGCCTGCGGGTC | + |
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Preference number: 1 (lower is better) Translates to: TFGAEATEVGEQQRT*SSAQQGAKGRSLRV Trigger: GACCCGCAGGCTGCGTCCCTTCGCACCTTGTTGTGCGCTGCTCCACGTCCGCTGCTGCTCGCCTACTTCAGTCGCCTCTGCGCCAAAGGT 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203281.3 |
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| 3UTR TCA 90 bp | GTAGGCGCCGGCCGAGGAGGACCAGAACTACACCCACTAGAGCGGTaGGAGCCAGCAGTGCCAGGATCAAGAGCCCGAGGTGTCTATGGG | + |
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Preference number: 1 (lower is better) Translates to: VGAGRGGPELHPLER*EPAVPGSRARGVYG Trigger: CCCATAGACACCTCGGGCTCTTGATCCTGGCACTGCTGGCTCTCACCGCTCTAGTGGGTGTAGTTCTGGTCCTCCTCGGCCGGCGCCTAC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203281.3 |
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| 3UTR TCA 90 bp | CTTCTGACTCCTGTGCTGTGGCGTTGGGAAGGGTTTCGCAGGGTGTaGGTGGGTCCTGCCTCCAGCAGAGGGAGGCCTCCAGTTTCAGTG | + |
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Preference number: 1 (lower is better) Translates to: LLTPVLWRWEGFRRV*VGPASSRGRPPVSV Trigger: CACTGAAACTGGAGGCCTCCCTCTGCTGGAGGCAGGACCCACTCACACCCTGCGAAACCCTTCCCAACGCCACAGCACAGGAGTCAGAAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203281.3 |
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| 3UTR CCA 90 bp | CTCAGGAAGGGGATGATGAGGTCTAGCGTCACTGGGACTGAGCCCTaGGTCTGGCTGATGCTGTACACAGGAGGCATGGGGGTATCCGGC | + |
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Preference number: 1 (lower is better) Translates to: LRKGMMRSSVTGTEP*VWLMLYTGGMGVSG Trigger: GCCGGATACCCCCATGCCTCCTGTGTACAGCATCAGCCAGACCCAGGGCTCAGTCCCAGTGACGCTAGACCTCATCATCCCCTTCCTGAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000203281.3 |
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| 3UTR GCA 90 bp | CGCACACTGGCCTTGGGGCCTGCAGGAATAGTCACCCGAACAGCCTaGACCTCGGGCAGCAAATCAAAGGAGAATTCAGGTCCTCCACAC | + |
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Preference number: 1 (lower is better) Translates to: RTLALGPAGIVTRTA*TSGSKSKENSGPPH Trigger: GTGTGGAGGACCTGAATTCTCCTTTGATTTGCTGCCCGAGGTGCAGGCTGTTCGGGTGACTATTCCTGCAGGCCCCAAGGCCAGTGTGCG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203281.3 |
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| 3UTR GCA 90 bp | TTCCAGTGCCCACTGATAACAAAGGCGCACACTGGCCTTGGGGCCTaGAGGAATAGTCACCCGAACAGCCTGCACCTCGGGCAGCAAATC | + |
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Preference number: 1 (lower is better) Translates to: FQCPLITKAHTGLGA*RNSHPNSLHLGQQI Trigger: GATTTGCTGCCCGAGGTGCAGGCTGTTCGGGTGACTATTCCTGCAGGCCCCAAGGCCAGTGTGCGCCTTTGTTATCAGTGGGCACTGGAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203281.3 |
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| 3UTR CCA 90 bp | CAGCTGAAGGCTGGGCCCTTTTGGTGCGTTGGCCTCTGTGGGAGATaGCTGAGGAGGGGATGGAAATTCGATGGCTTTCCTCAGACAGGG | + |
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Preference number: 1 (lower is better) Translates to: QLKAGPFWCVGLCGR*LRRGWKFDGFPQTG Trigger: CCCTGTCTGAGGAAAGCCATCGAATTTCCATCCCCTCCTCAGCCATCTCCCACAGAGGCCAACGCACCAAAAGGGCCCAGCCTTCAGCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000203281.3 |
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| 3UTR CCA 90 bp | GCTGATGCTGTACACAGGAGGCATGGGGGTATCCGGCCCCAAACCTaGGTCACTCCAGGCAGCACTGAAGGTGGCATATGTCCTCGAAGA | + |
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Preference number: 1 (lower is better) Translates to: ADAVHRRHGGIRPQT*VTPGSTEGGICPRR Trigger: TCTTCGAGGACATATGCCACCTTCAGTGCTGCCTGGAGTGACCCAGGTTTGGGGCCGGATACCCCCATGCCTCCTGTGTACAGCATCAGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000203281.3 |
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| 3UTR CCA 90 bp | CCCTTTTGGTGCGTTGGCCTCTGTGGGAGATGGCTGAGGAGGGGATaGAAATTCGATGGCTTTCCTCAGACAGGGAAGGGCTGCCTAGCA | + |
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Preference number: 1 (lower is better) Translates to: PFWCVGLCGRWLRRG*KFDGFPQTGKGCLA Trigger: TGCTAGGCAGCCCTTCCCTGTCTGAGGAAAGCCATCGAATTTCCATCCCCTCCTCAGCCATCTCCCACAGAGGCCAACGCACCAAAAGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000203281.3 |
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| 3UTR CCA 90 bp | CCTTCTGCAGCTGAAGGCTGGGCCCTTTTGGTGCGTTGGCCTCTGTaGGAGATGGCTGAGGAGGGGATGGAAATTCGATGGCTTTCCTCA | + |
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Preference number: 1 (lower is better) Translates to: PSAAEGWALLVRWPL*EMAEEGMEIRWLSS Trigger: TGAGGAAAGCCATCGAATTTCCATCCCCTCCTCAGCCATCTCCCACAGAGGCCAACGCACCAAAAGGGCCCAGCCTTCAGCTGCAGAAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000203281.3 |
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| 3UTR GCA 90 bp | TCCTCGAAGAAAAGTGAAGCGTCAGCTGCTGGGCCTGGGTATCCATaGTCACAGTCCAGGATGGGAGAGAGCCACTCTGGTGGGGACATT | + |
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Preference number: 1 (lower is better) Translates to: SSKKSEASAAGPGYP*SQSRMGESHSGGDI Trigger: AATGTCCCCACCAGAGTGGCTCTCTCCCATCCTGGACTGTGAGCATGGATACCCAGGCCCAGCAGCTGACGCTTCACTTTTCTTCGAGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000203281.3 |
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| 3UTR TCA 90 bp | TCACTCCAGGCAGCACTGAAGGTGGCATATGTCCTCGAAGAAAAGTaGAGCGTCAGCTGCTGGGCCTGGGTATCCATGCTCACAGTCCAG | + |
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Preference number: 1 (lower is better) Translates to: SLQAALKVAYVLEEK*SVSCWAWVSMLTVQ Trigger: CTGGACTGTGAGCATGGATACCCAGGCCCAGCAGCTGACGCTTCACTTTTCTTCGAGGACATATGCCACCTTCAGTGCTGCCTGGAGTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203281.3 |
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| 3UTR TCA 90 bp | TCTTACGGTTTGGGGGACAAGAAGCACCCCCAAAGAGTACATGTGTaGGGCCTCATTCTGGAGTTCCTGCTGTTGCTACACAGGCTGAGG | + |
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Preference number: 1 (lower is better) Translates to: SYGLGDKKHPQRVHV*GLILEFLLLLHRLR Trigger: CCTCAGCCTGTGTAGCAACAGCAGGAACTCCAGAATGAGGCCTCACACATGTACTCTTTGGGGGTGCTTCTTGTCCCCCAAACCGTAAGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000058548.14 ENSMUST00000203661.3 ENSMUST00000204774.3 |
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| 3UTR TCA 90 bp | GGAGACATCAGGACACAAGACGTGCTTCCAGGCAAAATGGACATCTaGCCTCCACACCAGGATGCAATTCTCCTGCCTCAGGAAGGGGAT | + |
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Preference number: 1 (lower is better) Translates to: GDIRTQDVLPGKMDI*PPHQDAILLPQEGD Trigger: ATCCCCTTCCTGAGGCAGGAGAATTGCATCCTGGTGTGGAGGTCAGATGTCCATTTTGCCTGGAAGCACGTCTTGTGTCCTGATGTCTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000203281.3 |
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| 3UTR CCA 90 bp | GAGGGAGGTTGGTCAAGTGTGGGACTTAAGGTGAGTCTTACGGTTTaGGGGACAAGAAGCACCCCCAAAGAGTACATGTGTGAGGCCTCA | + |
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Preference number: 1 (lower is better) Translates to: EGGWSSVGLKVSLTV*GTRSTPKEYMCEAS Trigger: TGAGGCCTCACACATGTACTCTTTGGGGGTGCTTCTTGTCCCCCAAACCGTAAGACTCACCTTAAGTCCCACACTTGACCAACCTCCCTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000058548.14 ENSMUST00000203661.3 ENSMUST00000204774.3 |
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| 3UTR TCA 90 bp | GAGGGAGCAAATGTGAGGGAGGTTGGTCAAGTGTGGGACTTAAGGTaGGTCTTACGGTTTGGGGGACAAGAAGCACCCCCAAAGAGTACA | + |
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Preference number: 1 (lower is better) Translates to: EGANVREVGQVWDLR*VLRFGGQEAPPKST Trigger: TGTACTCTTTGGGGGTGCTTCTTGTCCCCCAAACCGTAAGACTCACCTTAAGTCCCACACTTGACCAACCTCCCTCACATTTGCTCCCTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000058548.14 ENSMUST00000203661.3 ENSMUST00000204774.3 |
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| 3UTR CCA 90 bp | TGTCTATGGGAGACATCAGGACACAAGACGTGCTTCCAGGCAAAATaGACATCTGACCTCCACACCAGGATGCAATTCTCCTGCCTCAGG | + |
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Preference number: 1 (lower is better) Translates to: CLWETSGHKTCFQAK*TSDLHTRMQFSCLR Trigger: CCTGAGGCAGGAGAATTGCATCCTGGTGTGGAGGTCAGATGTCCATTTTGCCTGGAAGCACGTCTTGTGTCCTGATGTCTCCCATAGACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203281.3 |
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| 3UTR CCA 90 bp | CATTCAACGTGGCTGCTGTTTTCAAATGAGAACTTAAAGCAGAGCTaGGGGTGCAAGTCCACATTCTCCAGGATATACCATCCTTCTGAC | + |
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Preference number: 1 (lower is better) Translates to: HSTWLLFSNENLKQS*GCKSTFSRIYHPSD Trigger: GTCAGAAGGATGGTATATCCTGGAGAATGTGGACTTGCACCCCCAGCTCTGCTTTAAGTTCTCATTTGAAAACAGCAGCCACGTTGAATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000203281.3 |
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| 3UTR-3UTR GCA 90 bp | GAAGGGACGCAGCCTGCGGGTCACCGCTGCAGGCGGTGCTGGGACCCGCACAGTACAGGAGCAGCACTGTaGCCTGCTCCCGCGCCACGC | + |
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Preference number: 2 (lower is better) Translates to: EGTQPAGHRCRRCWDPHSTGAAL*PAPAPR Trigger: GCGTGGCGCGGGAGCAGGGCACAGTGCTGCTCCTGT...ACTGTGCGGGTCCCAGCACCGCCTGCAGCGGTGACCCGCAGGCTGCGTCCCTTC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203281.3 |
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| 3UTR-3UTR CCA 90 bp | CCCGCGCCACGCGCTCCCGCGCTGCCCAAAGCCACGGCAGTGGTCCAATGCGTGGGCCTCCAGTTTCAGTaGGCAGCGGAGTGTCAGAGC | + |
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Preference number: 2 (lower is better) Translates to: PAPRAPALPKATAVVQCVGLQFQ*AAECQS Trigger: GCTCTGACACTCCGCTGCCCACTGAAACTGGAGGCC...CACGCATTGGACCACTGCCGTGGCTTTGGGCAGCGCGGGAGCGCGTGGCGCGGG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203281.3 |
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| 3UTR-3UTR GCA 90 bp | GAAGGGACGCAGCCTGCGGGTCACCGCTGCAGGCGGTGCTGGGACCCGCACAGTGGGCCTGGGTATCCATaGTCACAGTCCAGGATGGGA | + |
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Preference number: 2 (lower is better) Translates to: EGTQPAGHRCRRCWDPHSGPGYP*SQSRMG Trigger: TCCCATCCTGGACTGTGAGCATGGATACCCAGGCCC...ACTGTGCGGGTCCCAGCACCGCCTGCAGCGGTGACCCGCAGGCTGCGTCCCTTC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203281.3 |
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| 3UTR-3UTR CCA 90 bp | CCTGGCAGTAGGCGCCGGCCGAGGAGGACCAGAACTACACCCACTAGAGCGGTGGTGCGTTGGCCTCTGTaGGAGATGGCTGAGGAGGGG | + |
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Preference number: 2 (lower is better) Translates to: PGSRRRPRRTRTTPTRAVVRWPL*EMAEEG Trigger: CCCCTCCTCAGCCATCTCCCACAGAGGCCAACGCAC...CACCGCTCTAGTGGGTGTAGTTCTGGTCCTCCTCGGCCGGCGCCTACTGCCAGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203281.3 |
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| 3UTR-3UTR CCA 90 bp | CCGCTGCAGGCGGTGCTGGGACCCGCACAGTTCCACAGGAGCAGCACTGTGCCCGCCCTTTTGGTGCGTTaGCCTCTGTGGGAGATGGCT | + |
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Preference number: 2 (lower is better) Translates to: PLQAVLGPAQFHRSSTVPALLVR*PLWEMA Trigger: AGCCATCTCCCACAGAGGCCAACGCACCAAAAGGGC...GGGCACAGTGCTGCTCCTGTGGAACTGTGCGGGTCCCAGCACCGCCTGCAGCGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203281.3 |
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| 3UTR-3UTR CCA 90 bp | CCTGGCAGTAGGCGCCGGCCGAGGAGGACCAGAACTACACCCACTAGAGCGGTGAAGGCTGGGCCCTTTTaGTGCGTTGGCCTCTGTGGG | + |
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Preference number: 2 (lower is better) Translates to: PGSRRRPRRTRTTPTRAVKAGPF*CVGLCG Trigger: CCCACAGAGGCCAACGCACCAAAAGGGCCCAGCCTT...CACCGCTCTAGTGGGTGTAGTTCTGGTCCTCCTCGGCCGGCGCCTACTGCCAGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203281.3 |
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| 3UTR-3UTR TCA 90 bp | TCCAGCTGGAGGCTAGGGTGGCAGGCTGAGCATCCAGTGCTCTCAGCAGGCGCGCACTCCAGGCAGCACTaGAGGTGGCATATGTCCTCG | + |
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Preference number: 2 (lower is better) Translates to: SSWRLGWQAEHPVLSAGAHSRQH*RWHMSS Trigger: CGAGGACATATGCCACCTTCAGTGCTGCCTGGAGTG...CGCGCCTGCTGAGAGCACTGGATGCTCAGCCTGCCACCCTAGCCTCCAGCTGGA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203281.3 |
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| 3UTR-3UTR GCA 90 bp | CAGCGGCCGGGGGATGTCACCTTTGGCGCAGAGGCGACTGAAGTAGGCGAGCAGGTCACCCGAACAGCCTaGACCTCGGGCAGCAAATCA | + |
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Preference number: 2 (lower is better) Translates to: QRPGDVTFGAEATEVGEQVTRTA*TSGSKS Trigger: TGATTTGCTGCCCGAGGTGCAGGCTGTTCGGGTGAC...CTGCTCGCCTACTTCAGTCGCCTCTGCGCCAAAGGTGACATCCCCCGGCCGCTG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000203281.3 |
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| 3UTR-3UTR GCA 90 bp | TTTGGCGCAGAGGCGACTGAAGTAGGCGAGCAGCAGCGGACGTGGAGCAGCGCAGGTGAGAGCCAGCAGTaGCAGGATCAAGAGCCCGAG | + |
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Preference number: 2 (lower is better) Translates to: FGAEATEVGEQQRTWSSAGESQQ*QDQEPE Trigger: CTCGGGCTCTTGATCCTGGCACTGCTGGCTCTCACC...TGCGCTGCTCCACGTCCGCTGCTGCTCGCCTACTTCAGTCGCCTCTGCGCCAAA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203281.3 |
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| 3UTR-3UTR CCA 90 bp | CAGCGGCCGGGGGATGTCACCTTTGGCGCAGAGGCGACTGAAGTAGGCGAGCAGGGCCTCTGTGGGAGATaGCTGAGGAGGGGATGGAAA | + |
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Preference number: 2 (lower is better) Translates to: QRPGDVTFGAEATEVGEQGLCGR*LRRGWK Trigger: TTTCCATCCCCTCCTCAGCCATCTCCCACAGAGGCC...CTGCTCGCCTACTTCAGTCGCCTCTGCGCCAAAGGTGACATCCCCCGGCCGCTG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000203281.3 |
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| 3UTR-3UTR CCA 90 bp | CCTGGCAGTAGGCGCCGGCCGAGGAGGACCAGAACTACACCCACTAGAGCGGTGACTGGGACTGAGCCCTaGGTCTGGCTGATGCTGTAC | + |
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Preference number: 2 (lower is better) Translates to: PGSRRRPRRTRTTPTRAVTGTEP*VWLMLY Trigger: GTACAGCATCAGCCAGACCCAGGGCTCAGTCCCAGT...CACCGCTCTAGTGGGTGTAGTTCTGGTCCTCCTCGGCCGGCGCCTACTGCCAGG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203281.3 |
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| 3UTR-3UTR CCA 90 bp | CTGCTCCCGCGCCACGCGCTCCCGCGCTGCCCAAAGCCACGGCAGTGGTCCAATTGCTTCCAGGCAAAATaGACATCTGACCTCCACACC | + |
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Preference number: 2 (lower is better) Translates to: LLPRHALPRCPKPRQWSNCFQAK*TSDLHT Trigger: GGTGTGGAGGTCAGATGTCCATTTTGCCTGGAAGCA...ATTGGACCACTGCCGTGGCTTTGGGCAGCGCGGGAGCGCGTGGCGCGGGAGCAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203281.3 |
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| 3UTR-3UTR GCA 90 bp | TCCACCTCCCAGCGCCGTCCGCAGCAGTTCGGCCAAAGCTCCCACCAGGCGTCGTCAGGACACAAGACGTaGTTCCAGGCAAAATGGACA | + |
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Preference number: 2 (lower is better) Translates to: STSQRRPQQFGQSSHQASSGHKT*FQAKWT Trigger: TGTCCATTTTGCCTGGAAGCACGTCTTGTGTCCTGA...CGACGCCTGGTGGGAGCTTTGGCCGAACTGCTGCGGACGGCGCTGGGAGGTGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203281.3 |
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| 3UTR-3UTR TCA 90 bp | CAGGATGGGAGAGAGCCACTCTGGTGGGGACATTCAACGTGGCTGCTGTTTTCAGGGTTTCGCAGGGTGTaGGTGGGTCCTGCCTCCAGC | + |
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Preference number: 2 (lower is better) Translates to: QDGREPLWWGHSTWLLFSGFRRV*VGPASS Trigger: GCTGGAGGCAGGACCCACTCACACCCTGCGAAACCC...TGAAAACAGCAGCCACGTTGAATGTCCCCACCAGAGTGGCTCTCTCCCATCCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000203281.3 |
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| 3UTR-3UTR CCA 90 bp | TGTGCTGTGGCGTTGGGAAGGGTTTCGCAGGGTGTGAGTGGGTCCTGCCTCCAGGCTTCAGGCCAGCTCTaGAAGGGACACTTTTTGCGC | + |
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Preference number: 2 (lower is better) Translates to: CAVALGRVSQGVSGSCLQASGQL*KGHFLR Trigger: GCGCAAAAAGTGTCCCTTCCAGAGCTGGCCTGAAGC...CTGGAGGCAGGACCCACTCACACCCTGCGAAACCCTTCCCAACGCCACAGCACA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000203281.3 |
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| 3UTR-3UTR GCA 90 bp | AGCGTGGCAGAGCGCGCAGCGGCCGGGGGATGTCACCTTTGGCGCAGAGGCGACGACATTCAACGTGGCTaGTGTTTTCAAATGAGAACT | + |
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Preference number: 2 (lower is better) Translates to: SVAERAAAGGCHLWRRGDDIQRG*CFQMRT Trigger: AGTTCTCATTTGAAAACAGCAGCCACGTTGAATGTC...GTCGCCTCTGCGCCAAAGGTGACATCCCCCGGCCGCTGCGCGCTCTGCCACGCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000203281.3 |
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| 3UTR-3UTR CCA 90 bp | GGCAGTGGTCCAATGCGTGCTACGTGCGTCCCTTCCCAGAGATCCACGATCACGACTGAGCCCTGGGTCTaGCTGATGCTGTACACAGGA | + |
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Preference number: 2 (lower is better) Translates to: GSGPMRATCVPSQRSTITTEPWV*LMLYTG Trigger: TCCTGTGTACAGCATCAGCCAGACCCAGGGCTCAGT...CGTGATCGTGGATCTCTGGGAAGGGACGCACGTAGCACGCATTGGACCACTGCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203281.3 |
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| 3UTR-3UTR CCA 90 bp | CAGGATGGGAGAGAGCCACTCTGGTGGGGACATTCAACGTGGCTGCTGTTTTCATTCGCAGGGTGTGAGTaGGTCCTGCCTCCAGCAGAG | + |
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Preference number: 2 (lower is better) Translates to: QDGREPLWWGHSTWLLFSFAGCE*VLPPAE Trigger: CTCTGCTGGAGGCAGGACCCACTCACACCCTGCGAA...TGAAAACAGCAGCCACGTTGAATGTCCCCACCAGAGTGGCTCTCTCCCATCCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000203281.3 |
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| 3UTR CAA 90 bp | ACATTCTCCAGGATATACCATCCTTCTGACTCCTGTGCTGTGGCGTaGGGAAGGGTTTCGCAGGGTGTGAGTGGGTCCTGCCTCCAGCAG | + |
|
Preference number: 2 (lower is better) Translates to: TFSRIYHPSDSCAVA*GRVSQGVSGSCLQQ Trigger: CTGCTGGAGGCAGGACCCACTCACACCCTGCGAAACCCTTCCCAACGCCACAGCACAGGAGTCAGAAGGATGGTATATCCTGGAGAATGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203281.3 |
||
| 3UTR-3UTR GCA 90 bp | GGCAGTGGTCCAATGCGTGCTACGTGCGTCCCTTCCCAGAGATCCACGATCACGGTCTTCACATTCCAGTaGCCACTGATAACAAAGGCG | + |
|
Preference number: 2 (lower is better) Translates to: GSGPMRATCVPSQRSTITVFTFQ*PLITKA Trigger: CGCCTTTGTTATCAGTGGGCACTGGAATGTGAAGAC...CGTGATCGTGGATCTCTGGGAAGGGACGCACGTAGCACGCATTGGACCACTGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203281.3 |
||
| 3UTR-3UTR GCA 90 bp | GGCAGTGGTCCAATGCGTGCTACGTGCGTCCCTTCCCAGAGATCCACGATCACGAGGCCTCTATGCACATaGAGGGCAGAAGGAATTCAT | + |
|
Preference number: 2 (lower is better) Translates to: GSGPMRATCVPSQRSTITRPLCT*RAEGIH Trigger: ATGAATTCCTTCTGCCCTGCATGTGCATAGAGGCCT...CGTGATCGTGGATCTCTGGGAAGGGACGCACGTAGCACGCATTGGACCACTGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203281.3 |
||
| 3UTR-3UTR CCA 90 bp | GGCAGTAGGCGCCGGCCGAGGAGGACCAGAACTACACCCACTAGAGCGGTGAGACCAGACACAATTTTCTaGGTATCAAAAGGGCTACTC | + |
|
Preference number: 2 (lower is better) Translates to: GSRRRPRRTRTTPTRAVRPDTIF*VSKGLL Trigger: GAGTAGCCCTTTTGATACCCAGAAAATTGTGTCTGG...TCTCACCGCTCTAGTGGGTGTAGTTCTGGTCCTCCTCGGCCGGCGCCTACTGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000203281.3 |
||
| 3UTR-3UTR CCA 90 bp | GTCCCTCCTTCTCAGAAAGGGCTGAGGACCTATCAGGAAAGCCCAAGTTCCTCTGTGAGTCTTACGGTTTaGGGGACAAGAAGCACCCCC | + |
|
Preference number: 2 (lower is better) Translates to: VPPSQKGLRTYQESPSSSVSLTV*GTRSTP Trigger: GGGGGTGCTTCTTGTCCCCCAAACCGTAAGACTCAC...AGAGGAACTTGGGCTTTCCTGATAGGTCCTCAGCCCTTTCTGAGAAGGAGGGAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000058548.14 ENSMUST00000203661.3 ENSMUST00000204774.3 |
||
| 3UTR-3UTR CCA 90 bp | GCTGAGGACCTATCAGGAAAGCCCAAGTTCCTCTCAGGAACTCTAAGAGGGAGCGTGAGTCTTACGGTTTaGGGGACAAGAAGCACCCCC | + |
|
Preference number: 2 (lower is better) Translates to: AEDLSGKPKFLSGTLRGSVSLTV*GTRSTP Trigger: GGGGGTGCTTCTTGTCCCCCAAACCGTAAGACTCAC...GCTCCCTCTTAGAGTTCCTGAGAGGAACTTGGGCTTTCCTGATAGGTCCTCAGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000058548.14 ENSMUST00000203661.3 ENSMUST00000204774.3 |
||
| 3UTR-3UTR TCA 90 bp | AGCAGAGCTGGGGGTGCAAGTCCACATTCTCCAGGATATACCATCCTTCTGACTGGAGTGTCAGAGCCATaGCCATCTGATTGTGCTGGC | + |
|
Preference number: 2 (lower is better) Translates to: SRAGGASPHSPGYTILLTGVSEP*PSDCAG Trigger: GCCAGCACAATCAGATGGTCATGGCTCTGACACTCC...AGTCAGAAGGATGGTATATCCTGGAGAATGTGGACTTGCACCCCCAGCTCTGCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000203281.3 |
||
| 3UTR-3UTR CCA 90 bp | TGCAGGAATAGTCACCCGAACAGCCTGCACCTCGGGCAGCAAATCAAAGGAGAACCTCTGGAAGGATGCTaGTGTCCTGTGCCTCCAATA | + |
|
Preference number: 2 (lower is better) Translates to: CRNSHPNSLHLGQQIKGEPLEGC*CPVPPI Trigger: TATTGGAGGCACAGGACACCAGCATCCTTCCAGAGG...TTCTCCTTTGATTTGCTGCCCGAGGTGCAGGCTGTTCGGGTGACTATTCCTGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203281.3 |
||
| 3UTR-3UTR CCA 90 bp | ATTCCAGTGCCCACTGATAACAAAGGCGCACACTGGCCTTGGGGCCTGCAGGAAGGGATGGAAATTCGATaGCTTTCCTCAGACAGGGAA | + |
|
Preference number: 2 (lower is better) Translates to: IPVPTDNKGAHWPWGLQEGMEIR*LSSDRE Trigger: TTCCCTGTCTGAGGAAAGCCATCGAATTTCCATCCC...TTCCTGCAGGCCCCAAGGCCAGTGTGCGCCTTTGTTATCAGTGGGCACTGGAAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203281.3 |
||
| 3UTR-3UTR CCA 90 bp | GGTGTCTATGGGAGACATCAGGACACAAGACGTGCTTCCAGGCAAAATGGACATGCTCACAGTCCAGGATaGGAGAGAGCCACTCTGGTG | + |
|
Preference number: 2 (lower is better) Translates to: GVYGRHQDTRRASRQNGHAHSPG*ERATLV Trigger: CACCAGAGTGGCTCTCTCCCATCCTGGACTGTGAGC...ATGTCCATTTTGCCTGGAAGCACGTCTTGTGTCCTGATGTCTCCCATAGACACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203281.3 |
||
| 3UTR-3UTR TCA 90 bp | AGCAGAGCTGGGGGTGCAAGTCCACATTCTCCAGGATATACCATCCTTCTGACTGCTGGCTGTAGTCAGTaGAGCGTATTGACTGCCAGA | + |
|
Preference number: 2 (lower is better) Translates to: SRAGGASPHSPGYTILLTAGCSQ*SVLTAR Trigger: TCTGGCAGTCAATACGCTTCACTGACTACAGCCAGC...AGTCAGAAGGATGGTATATCCTGGAGAATGTGGACTTGCACCCCCAGCTCTGCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000203281.3 |
||
| 3UTR-3UTR TCA 90 bp | GTCCCTCCTTCTCAGAAAGGGCTGAGGACCTATCAGGAAAGCCCAAGTTCCTCTCAAAGAGTACATGTGTaGGGCCTCATTCTGGAGTTC | + |
|
Preference number: 2 (lower is better) Translates to: VPPSQKGLRTYQESPSSSQRVHV*GLILEF Trigger: GAACTCCAGAATGAGGCCTCACACATGTACTCTTTG...AGAGGAACTTGGGCTTTCCTGATAGGTCCTCAGCCCTTTCTGAGAAGGAGGGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058548.14 ENSMUST00000203661.3 ENSMUST00000204774.3 |
||
| 3UTR-3UTR TCA 90 bp | TGTGAGGGAGGTTGGTCAAGTGTGGGACTTAAGGTGAGTCTTACGGTTTGGGGGCAAAGAGTACATGTGTaGGGCCTCATTCTGGAGTTC | + |
|
Preference number: 2 (lower is better) Translates to: CEGGWSSVGLKVSLTVWGQRVHV*GLILEF Trigger: GAACTCCAGAATGAGGCCTCACACATGTACTCTTTG...CCCCCAAACCGTAAGACTCACCTTAAGTCCCACACTTGACCAACCTCCCTCACA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000058548.14 ENSMUST00000203661.3 ENSMUST00000204774.3 |
||
| 3UTR-3UTR TCA 90 bp | CCCAAGTTCCTCTCAGGAACTCTAAGAGGGAGCAAATGTGAGGGAGGTTGGTCACAAAGAGTACATGTGTaGGGCCTCATTCTGGAGTTC | + |
|
Preference number: 2 (lower is better) Translates to: PKFLSGTLRGSKCEGGWSQRVHV*GLILEF Trigger: GAACTCCAGAATGAGGCCTCACACATGTACTCTTTG...TGACCAACCTCCCTCACATTTGCTCCCTCTTAGAGTTCCTGAGAGGAACTTGGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058548.14 ENSMUST00000203661.3 ENSMUST00000204774.3 |
||
| 3UTR-3UTR TCA 90 bp | AAAATCGTCCCTCCTTCTCAGAAAGGGCTGAGGACCTATCAGGAAAGCCCAAGTAAGAGGGAGCAAATGTaGGGGAGGTTGGTCAAGTGT | + |
|
Preference number: 2 (lower is better) Translates to: KIVPPSQKGLRTYQESPSKREQM*GRLVKC Trigger: ACACTTGACCAACCTCCCTCACATTTGCTCCCTCTT...ACTTGGGCTTTCCTGATAGGTCCTCAGCCCTTTCTGAGAAGGAGGGACGATTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000058548.14 ENSMUST00000203661.3 ENSMUST00000204774.3 |
||
| 3UTR-3UTR CCA 90 bp | GGTGTCTATGGGAGACATCAGGACACAAGACGTGCTTCCAGGCAAAATGGACATTGGGGACATTCAACGTaGCTGCTGTTTTCAAATGAG | + |
|
Preference number: 2 (lower is better) Translates to: GVYGRHQDTRRASRQNGHWGHST*LLFSNE Trigger: CTCATTTGAAAACAGCAGCCACGTTGAATGTCCCCA...ATGTCCATTTTGCCTGGAAGCACGTCTTGTGTCCTGATGTCTCCCATAGACACC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000203281.3 |
||
| 3UTR GCA 72 bp | TGCTGGGACCCGCACAGTTCCACAGGAGCAGCACTGTaGCCTGCTCCCGCGCCACGCGCTCCCGCGCTGCCC | + |
|
Preference number: 3 (lower is better) Translates to: CWDPHSSTGAAL*PAPAPRAPALP Trigger: GGGCAGCGCGGGAGCGCGTGGCGCGGGAGCAGGGCACAGTGCTGCTCCTGTGGAACTGTGCGGGTCCCAGCA 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203281.3 |
||
| 3UTR GCA 72 bp | GGACCCGCACAGTTCCACAGGAGCAGCACTGTGCCCTaGTCCCGCGCCACGCGCTCCCGCGCTGCCCAAAGC | + |
|
Preference number: 3 (lower is better) Translates to: GPAQFHRSSTVP*SRATRSRAAQS Trigger: GCTTTGGGCAGCGCGGGAGCGCGTGGCGCGGGAGCAGGGCACAGTGCTGCTCCTGTGGAACTGTGCGGGTCC 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203281.3 |
||
| 3UTR GCA 72 bp | CACTGTGCCCTGCTCCCGCGCCACGCGCTCCCGCGCTaGCCAAAGCCACGGCAGTGGTCCAATGCGTGCTAC | + |
|
Preference number: 3 (lower is better) Translates to: HCALLPRHALPR*PKPRQWSNACY Trigger: GTAGCACGCATTGGACCACTGCCGTGGCTTTGGGCAGCGCGGGAGCGCGTGGCGCGGGAGCAGGGCACAGTG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203281.3 |
||
| 3UTR GCA 72 bp | GGAGCAGCGCACAACAAGGTGCGAAGGGACGCAGCCTaGGGGTCACCGCTGCAGGCGGTGCTGGGACCCGCA | + |
|
Preference number: 3 (lower is better) Translates to: GAAHNKVRRDAA*GSPLQAVLGPA Trigger: TGCGGGTCCCAGCACCGCCTGCAGCGGTGACCCGCAGGCTGCGTCCCTTCGCACCTTGTTGTGCGCTGCTCC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203281.3 |
||
| 3UTR CCA 72 bp | GGGACGCAGCCTGCGGGTCACCGCTGCAGGCGGTGCTaGGACCCGCACAGTTCCACAGGAGCAGCACTGTGC | + |
|
Preference number: 3 (lower is better) Translates to: GTQPAGHRCRRC*DPHSSTGAALC Trigger: GCACAGTGCTGCTCCTGTGGAACTGTGCGGGTCCCAGCACCGCCTGCAGCGGTGACCCGCAGGCTGCGTCCC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203281.3 |
||
| 3UTR CCA 72 bp | CAGCAGGCGCGGCAGGTCACGAAGCAGGCGGTAGCGTaGCAGAGCGCGCAGCGGCCGGGGGATGTCACCTTT | + |
|
Preference number: 3 (lower is better) Translates to: QQARQVTKQAVA*QSAQRPGDVTF Trigger: AAAGGTGACATCCCCCGGCCGCTGCGCGCTCTGCCACGCTACCGCCTGCTTCGTGACCTGCCGCGCCTGCTG 71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000203281.3 |
||
| 3UTR TCA 72 bp | GCGGCCGGGGGATGTCACCTTTGGCGCAGAGGCGACTaGAGTAGGCGAGCAGCAGCGGACGTGGAGCAGCGC | + |
|
Preference number: 3 (lower is better) Translates to: AAGGCHLWRRGD*SRRAAADVEQR Trigger: GCGCTGCTCCACGTCCGCTGCTGCTCGCCTACTTCAGTCGCCTCTGCGCCAAAGGTGACATCCCCCGGCCGC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000203281.3 |
||
| 3UTR GCA 72 bp | GAAGGGACGCAGCCTGCGGGTCACCGCTGCAGGCGGTaGTGGGACCCGCACAGTTCCACAGGAGCAGCACTG | + |
|
Preference number: 3 (lower is better) Translates to: EGTQPAGHRCRR*WDPHSSTGAAL Trigger: CAGTGCTGCTCCTGTGGAACTGTGCGGGTCCCAGCACCGCCTGCAGCGGTGACCCGCAGGCTGCGTCCCTTC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203281.3 |
||
| 3UTR GCA 72 bp | CGAGCAGCAGCGGACGTGGAGCAGCGCACAACAAGGTaGGAAGGGACGCAGCCTGCGGGTCACCGCTGCAGG | + |
|
Preference number: 3 (lower is better) Translates to: RAAADVEQRTTR*EGTQPAGHRCR Trigger: CCTGCAGCGGTGACCCGCAGGCTGCGTCCCTTCGCACCTTGTTGTGCGCTGCTCCACGTCCGCTGCTGCTCG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203281.3 |
||
| 3UTR TCA 72 bp | CCTGTGCTGTGGCGTTGGGAAGGGTTTCGCAGGGTGTaGGTGGGTCCTGCCTCCAGCAGAGGGAGGCCTCCA | + |
|
Preference number: 3 (lower is better) Translates to: PVLWRWEGFRRV*VGPASSRGRPP Trigger: TGGAGGCCTCCCTCTGCTGGAGGCAGGACCCACTCACACCCTGCGAAACCCTTCCCAACGCCACAGCACAGG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203281.3 |
||
| 3UTR GCA 72 bp | GCTCCCGCGCTGCCCAAAGCCACGGCAGTGGTCCAATaGGTGCTACGTGCGTCCCTTCCCAGAGATCCACGA | + |
|
Preference number: 3 (lower is better) Translates to: APALPKATAVVQ*VLRASLPRDPR Trigger: TCGTGGATCTCTGGGAAGGGACGCACGTAGCACGCATTGGACCACTGCCGTGGCTTTGGGCAGCGCGGGAGC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203281.3 |
||
| 3UTR-3UTR CAA 90 bp | GCAGTTCGGCCAAAGCTCCCACCAGGCGTCGCTGTGCCTCTGAGTCCGCTGCATAGGCGCACACTGGCCTaGGGGCCTGCAGGAATAGTC | + |
|
Preference number: 3 (lower is better) Translates to: AVRPKLPPGVAVPLSPLHRRTLA*GPAGIV Trigger: GACTATTCCTGCAGGCCCCAAGGCCAGTGTGCGCCT...ATGCAGCGGACTCAGAGGCACAGCGACGCCTGGTGGGAGCTTTGGCCGAACTGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203281.3 |
||
| 3UTR GCA 72 bp | CCGCGCTGCCCAAAGCCACGGCAGTGGTCCAATGCGTaGTACGTGCGTCCCTTCCCAGAGATCCACGATCAC | + |
|
Preference number: 3 (lower is better) Translates to: PRCPKPRQWSNA*YVRPFPEIHDH Trigger: GTGATCGTGGATCTCTGGGAAGGGACGCACGTAGCACGCATTGGACCACTGCCGTGGCTTTGGGCAGCGCGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203281.3 |
||
| 3UTR CCA 72 bp | GGACGAGGCCTCCCTCTGGGGAAGGTGAGGGACTCCTaGCTGACGGGGTTTCTCTCAACTCTGCCGAGCAGA | + |
|
Preference number: 3 (lower is better) Translates to: GRGLPLGKVRDS*LTGFLSTLPSR Trigger: TCTGCTCGGCAGAGTTGAGAGAAACCCCGTCAGCCAGGAGTCCCTCACCTTCCCCAGAGGGAGGCCTCGTCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058548.14 |
||
| 3UTR GCA 72 bp | GCCCAAAGCCACGGCAGTGGTCCAATGCGTGCTACGTaGGTCCCTTCCCAGAGATCCACGATCACGTCGCGT | + |
|
Preference number: 3 (lower is better) Translates to: AQSHGSGPMRAT*VPSQRSTITSR Trigger: ACGCGACGTGATCGTGGATCTCTGGGAAGGGACGCACGTAGCACGCATTGGACCACTGCCGTGGCTTTGGGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203281.3 |
||
| 3UTR GCA 72 bp | CTCTTCCTTCTGCAGCTGAAGGCTGGGCCCTTTTGGTaGGTTGGCCTCTGTGGGAGATGGCTGAGGAGGGGA | + |
|
Preference number: 3 (lower is better) Translates to: LFLLQLKAGPFW*VGLCGRWLRRG Trigger: TCCCCTCCTCAGCCATCTCCCACAGAGGCCAACGCACCAAAAGGGCCCAGCCTTCAGCTGCAGAAGGAAGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000203281.3 |
||
| 3UTR GCA 72 bp | CCACTGATAACAAAGGCGCACACTGGCCTTGGGGCCTaGAGGAATAGTCACCCGAACAGCCTGCACCTCGGG | + |
|
Preference number: 3 (lower is better) Translates to: PLITKAHTGLGA*RNSHPNSLHLG Trigger: CCCGAGGTGCAGGCTGTTCGGGTGACTATTCCTGCAGGCCCCAAGGCCAGTGTGCGCCTTTGTTATCAGTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203281.3 |
||
| 3UTR CCA 72 bp | GCTGAAGGCTGGGCCCTTTTGGTGCGTTGGCCTCTGTaGGAGATGGCTGAGGAGGGGATGGAAATTCGATGG | + |
|
Preference number: 3 (lower is better) Translates to: AEGWALLVRWPL*EMAEEGMEIRW Trigger: CCATCGAATTTCCATCCCCTCCTCAGCCATCTCCCACAGAGGCCAACGCACCAAAAGGGCCCAGCCTTCAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000203281.3 |
||
| 3UTR CCA 72 bp | GTACACAGGAGGCATGGGGGTATCCGGCCCCAAACCTaGGTCACTCCAGGCAGCACTGAAGGTGGCATATGT | + |
|
Preference number: 3 (lower is better) Translates to: VHRRHGGIRPQT*VTPGSTEGGIC Trigger: ACATATGCCACCTTCAGTGCTGCCTGGAGTGACCCAGGTTTGGGGCCGGATACCCCCATGCCTCCTGTGTAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000203281.3 |
||
| 3UTR CCA 72 bp | ATGAGGTCTAGCGTCACTGGGACTGAGCCCTGGGTCTaGCTGATGCTGTACACAGGAGGCATGGGGGTATCC | + |
|
Preference number: 3 (lower is better) Translates to: MRSSVTGTEPWV*LMLYTGGMGVS Trigger: GGATACCCCCATGCCTCCTGTGTACAGCATCAGCCAGACCCAGGGCTCAGTCCCAGTGACGCTAGACCTCAT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000203281.3 |
||
| 3UTR CCA 72 bp | CTGTGGGAGATGGCTGAGGAGGGGATGGAAATTCGATaGCTTTCCTCAGACAGGGAAGGGCTGCCTAGCAGC | + |
|
Preference number: 3 (lower is better) Translates to: LWEMAEEGMEIR*LSSDREGLPSS Trigger: GCTGCTAGGCAGCCCTTCCCTGTCTGAGGAAAGCCATCGAATTTCCATCCCCTCCTCAGCCATCTCCCACAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203281.3 |
||
| 3UTR CCA 72 bp | GCTGGGCCCTTTTGGTGCGTTGGCCTCTGTGGGAGATaGCTGAGGAGGGGATGGAAATTCGATGGCTTTCCT | + |
|
Preference number: 3 (lower is better) Translates to: AGPFWCVGLCGR*LRRGWKFDGFP Trigger: AGGAAAGCCATCGAATTTCCATCCCCTCCTCAGCCATCTCCCACAGAGGCCAACGCACCAAAAGGGCCCAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000203281.3 |
||
| 3UTR GCA 72 bp | GCCTTGGGGCCTGCAGGAATAGTCACCCGAACAGCCTaGACCTCGGGCAGCAAATCAAAGGAGAATTCAGGT | + |
|
Preference number: 3 (lower is better) Translates to: ALGPAGIVTRTA*TSGSKSKENSG Trigger: ACCTGAATTCTCCTTTGATTTGCTGCCCGAGGTGCAGGCTGTTCGGGTGACTATTCCTGCAGGCCCCAAGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203281.3 |
||
| 3UTR GCA 72 bp | AAAAGTGAAGCGTCAGCTGCTGGGCCTGGGTATCCATaGTCACAGTCCAGGATGGGAGAGAGCCACTCTGGT | + |
|
Preference number: 3 (lower is better) Translates to: KSEASAAGPGYP*SQSRMGESHSG Trigger: ACCAGAGTGGCTCTCTCCCATCCTGGACTGTGAGCATGGATACCCAGGCCCAGCAGCTGACGCTTCACTTTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203281.3 |
||
| 3UTR TCA 72 bp | GCAGCACTGAAGGTGGCATATGTCCTCGAAGAAAAGTaGAGCGTCAGCTGCTGGGCCTGGGTATCCATGCTC | + |
|
Preference number: 3 (lower is better) Translates to: AALKVAYVLEEK*SVSCWAWVSML Trigger: GAGCATGGATACCCAGGCCCAGCAGCTGACGCTTCACTTTTCTTCGAGGACATATGCCACCTTCAGTGCTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203281.3 |
||
| 3UTR TCA 72 bp | TATCCGGCCCCAAACCTGGGTCACTCCAGGCAGCACTaGAGGTGGCATATGTCCTCGAAGAAAAGTGAAGCG | + |
|
Preference number: 3 (lower is better) Translates to: YPAPNLGHSRQH*RWHMSSKKSEA Trigger: CGCTTCACTTTTCTTCGAGGACATATGCCACCTTCAGTGCTGCCTGGAGTGACCCAGGTTTGGGGCCGGATA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000203281.3 |
||
| 3UTR GCA 72 bp | CCGAGGTGTCTATGGGAGACATCAGGACACAAGACGTaGTTCCAGGCAAAATGGACATCTGACCTCCACACC | + |
|
Preference number: 3 (lower is better) Translates to: PRCLWETSGHKT*FQAKWTSDLHT Trigger: GGTGTGGAGGTCAGATGTCCATTTTGCCTGGAAGCACGTCTTGTGTCCTGATGTCTCCCATAGACACCTCGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203281.3 |
||
| 3UTR TCA 72 bp | AATGTGAGGGAGGTTGGTCAAGTGTGGGACTTAAGGTaGGTCTTACGGTTTGGGGGACAAGAAGCACCCCCA | + |
|
Preference number: 3 (lower is better) Translates to: NVREVGQVWDLR*VLRFGGQEAPP Trigger: TGGGGGTGCTTCTTGTCCCCCAAACCGTAAGACTCACCTTAAGTCCCACACTTGACCAACCTCCCTCACATT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000058548.14 ENSMUST00000203661.3 ENSMUST00000204774.3 |
||
| 3UTR TCA 72 bp | AGGACACAAGACGTGCTTCCAGGCAAAATGGACATCTaGCCTCCACACCAGGATGCAATTCTCCTGCCTCAG | + |
|
Preference number: 3 (lower is better) Translates to: RTQDVLPGKMDI*PPHQDAILLPQ Trigger: CTGAGGCAGGAGAATTGCATCCTGGTGTGGAGGTCAGATGTCCATTTTGCCTGGAAGCACGTCTTGTGTCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203281.3 |
||
| 3UTR CCA 72 bp | ATGCTCACAGTCCAGGATGGGAGAGAGCCACTCTGGTaGGGACATTCAACGTGGCTGCTGTTTTCAAATGAG | + |
|
Preference number: 3 (lower is better) Translates to: MLTVQDGREPLW*GHSTWLLFSNE Trigger: CTCATTTGAAAACAGCAGCCACGTTGAATGTCCCCACCAGAGTGGCTCTCTCCCATCCTGGACTGTGAGCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203281.3 |
||
| 3UTR CCA 72 bp | TCCATGCTCACAGTCCAGGATGGGAGAGAGCCACTCTaGTGGGGACATTCAACGTGGCTGCTGTTTTCAAAT | + |
|
Preference number: 3 (lower is better) Translates to: SMLTVQDGREPL*WGHSTWLLFSN Trigger: ATTTGAAAACAGCAGCCACGTTGAATGTCCCCACCAGAGTGGCTCTCTCCCATCCTGGACTGTGAGCATGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000203281.3 |
||
| 3UTR CCA 72 bp | CACAGGGACTATTGGTTGAGCCTTGGTAGTCATCTTTaGCAGCCTCAAGTTCCAGCAGGTGACACTGCTCCA | + |
|
Preference number: 3 (lower is better) Translates to: HRDYWLSLGSHL*QPQVPAGDTAP Trigger: TGGAGCAGTGTCACCTGCTGGAACTTGAGGCTGCCAAAGATGACTACCAAGGCTCAACCAATAGTCCCTGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203281.3 |
||
| 3UTR GCA 72 bp | GGTATCAAAAGGGCTACTCAAGTCTTCACATTCCAGTaGCCACTGATAACAAAGGCGCACACTGGCCTTGGG | + |
|
Preference number: 3 (lower is better) Translates to: GIKRATQVFTFQ*PLITKAHTGLG Trigger: CCCAAGGCCAGTGTGCGCCTTTGTTATCAGTGGGCACTGGAATGTGAAGACTTGAGTAGCCCTTTTGATACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203281.3 |
||
| 3UTR CCA 72 bp | GAGACATCAGGACACAAGACGTGCTTCCAGGCAAAATaGACATCTGACCTCCACACCAGGATGCAATTCTCC | + |
|
Preference number: 3 (lower is better) Translates to: ETSGHKTCFQAK*TSDLHTRMQFS Trigger: GGAGAATTGCATCCTGGTGTGGAGGTCAGATGTCCATTTTGCCTGGAAGCACGTCTTGTGTCCTGATGTCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203281.3 |
||
| 3UTR TCA 72 bp | GAAATGGAAAAATCGTCCCTCCTTCTCAGAAAGGGCTaGGGACCTATCAGGAAAGCCCAAGTTCCTCTCAGG | + |
|
Preference number: 3 (lower is better) Translates to: EMEKSSLLLRKG*GPIRKAQVPLR Trigger: CCTGAGAGGAACTTGGGCTTTCCTGATAGGTCCTCAGCCCTTTCTGAGAAGGAGGGACGATTTTTCCATTTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000058548.14 ENSMUST00000203661.3 ENSMUST00000204774.3 |
||
| 3UTR CCA 72 bp | TGGTCAAGTGTGGGACTTAAGGTGAGTCTTACGGTTTaGGGGACAAGAAGCACCCCCAAAGAGTACATGTGT | + |
|
Preference number: 3 (lower is better) Translates to: WSSVGLKVSLTV*GTRSTPKEYMC Trigger: ACACATGTACTCTTTGGGGGTGCTTCTTGTCCCCCAAACCGTAAGACTCACCTTAAGTCCCACACTTGACCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000058548.14 ENSMUST00000203661.3 ENSMUST00000204774.3 |
||
| 3UTR CCA 72 bp | GATGGGAGAGAGCCACTCTGGTGGGGACATTCAACGTaGCTGCTGTTTTCAAATGAGAACTTAAAGCAGAGC | + |
|
Preference number: 3 (lower is better) Translates to: DGREPLWWGHST*LLFSNENLKQS Trigger: GCTCTGCTTTAAGTTCTCATTTGAAAACAGCAGCCACGTTGAATGTCCCCACCAGAGTGGCTCTCTCCCATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000203281.3 |
||
| 3UTR TCA 72 bp | CAAATCAAAGGAGAATTCAGGTCCTCCACACTTTTGTaGCCCTGCTTCAGGGAGATGTTCTCTTCCTTCTGC | + |
|
Preference number: 3 (lower is better) Translates to: QIKGEFRSSTLL*PCFREMFSSFC Trigger: GCAGAAGGAAGAGAACATCTCCCTGAAGCAGGGTCACAAAAGTGTGGAGGACCTGAATTCTCCTTTGATTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203281.3 |
||
| 3UTR CCA 72 bp | TGGCTGCTGTTTTCAAATGAGAACTTAAAGCAGAGCTaGGGGTGCAAGTCCACATTCTCCAGGATATACCAT | + |
|
Preference number: 3 (lower is better) Translates to: WLLFSNENLKQS*GCKSTFSRIYH Trigger: ATGGTATATCCTGGAGAATGTGGACTTGCACCCCCAGCTCTGCTTTAAGTTCTCATTTGAAAACAGCAGCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000203281.3 |
||
| CDS-3UTR GCA 90 bp | ACTACCTCTGGACGAGGCCTCCCTCTGGGGAAGGTGAGGGACTCCTGGCTGACGACAGGAGCAGCACTGTaGCCTGCTCCCGCGCCACGC | + |
|
Preference number: 4 (lower is better) Translates to: TTSGRGLPLGKVRDSWLTTGAAL*PAPAPR Trigger: GCGTGGCGCGGGAGCAGGGCACAGTGCTGCTCCTGT...CGTCAGCCAGGAGTCCCTCACCTTCCCCAGAGGGAGGCCTCGTCCAGAGGTAGT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058548.14 |
||
| CDS-3UTR GCA 90 bp | TACCTCTGGACGAGGCCTCCCTCTGGGGAAGGTGAGGGACTCCTGGCTGACGGGGGTGAGAGCCAGCAGTaGCAGGATCAAGAGCCCGAG | + |
|
Preference number: 4 (lower is better) Translates to: YLWTRPPSGEGEGLLADGGESQQ*QDQEPE Trigger: CTCGGGCTCTTGATCCTGGCACTGCTGGCTCTCACC...CCCGTCAGCCAGGAGTCCCTCACCTTCCCCAGAGGGAGGCCTCGTCCAGAGGTA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000058548.14 |
||
| CDS-3UTR GCA 90 bp | TACCTCTGGACGAGGCCTCCCTCTGGGGAAGGTGAGGGACTCCTGGCTGACGGGGTCACCCGAACAGCCTaGACCTCGGGCAGCAAATCA | + |
|
Preference number: 4 (lower is better) Translates to: YLWTRPPSGEGEGLLADGVTRTA*TSGSKS Trigger: TGATTTGCTGCCCGAGGTGCAGGCTGTTCGGGTGAC...CCCGTCAGCCAGGAGTCCCTCACCTTCCCCAGAGGGAGGCCTCGTCCAGAGGTA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058548.14 |
||
| CDS-3UTR CCA 90 bp | ACTACCTCTGGACGAGGCCTCCCTCTGGGGAAGGTGAGGGACTCCTGGCTGACGTTCGCAGGGTGTGAGTaGGTCCTGCCTCCAGCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: TTSGRGLPLGKVRDSWLTFAGCE*VLPPAE Trigger: CTCTGCTGGAGGCAGGACCCACTCACACCCTGCGAA...CGTCAGCCAGGAGTCCCTCACCTTCCCCAGAGGGAGGCCTCGTCCAGAGGTAGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058548.14 |
||
| CDS-3UTR CCA 90 bp | TACCTCTGGACGAGGCCTCCCTCTGGGGAAGGTGAGGGACTCCTGGCTGACGGGGCTCACAGTCCAGGATaGGAGAGAGCCACTCTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: YLWTRPPSGEGEGLLADGAHSPG*ERATLV Trigger: CACCAGAGTGGCTCTCTCCCATCCTGGACTGTGAGC...CCCGTCAGCCAGGAGTCCCTCACCTTCCCCAGAGGGAGGCCTCGTCCAGAGGTA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058548.14 |
||
| CDS-3UTR GCA 90 bp | TTACGGTTTGGGGGACAAGAAGCACCCCCAAAGAGTACATGTGTGAGGCCTCATCCTGCGGGTCACCGCTaGAGGCGGTGCTGGGACCCG | + |
|
Preference number: 4 (lower is better) Translates to: LRFGGQEAPPKSTCVRPHPAGHR*RRCWDP Trigger: CGGGTCCCAGCACCGCCTGCAGCGGTGACCCGCAGG...ATGAGGCCTCACACATGTACTCTTTGGGGGTGCTTCTTGTCCCCCAAACCGTAA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000058548.14 ENSMUST00000203661.3 ENSMUST00000204774.3 |
||
| CDS-3UTR GCA 90 bp | GGAAAGCCCAAGTTCCTCTCAGGAACTCTAAGAGGGAGCAAATGTGAGGGAGGTCCTGCGGGTCACCGCTaGAGGCGGTGCTGGGACCCG | + |
|
Preference number: 4 (lower is better) Translates to: GKPKFLSGTLRGSKCEGGPAGHR*RRCWDP Trigger: CGGGTCCCAGCACCGCCTGCAGCGGTGACCCGCAGG...ACCTCCCTCACATTTGCTCCCTCTTAGAGTTCCTGAGAGGAACTTGGGCTTTCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058548.14 ENSMUST00000203661.3 ENSMUST00000204774.3 |
||
| CDS-3UTR GCA 90 bp | CCCTCCTTCTCAGAAAGGGCTGAGGACCTATCAGGAAAGCCCAAGTTCCTCTCACGAAGGGACGCAGCCTaGGGGTCACCGCTGCAGGCG | + |
|
Preference number: 4 (lower is better) Translates to: PSFSERAEDLSGKPKFLSRRDAA*GSPLQA Trigger: CGCCTGCAGCGGTGACCCGCAGGCTGCGTCCCTTCG...TGAGAGGAACTTGGGCTTTCCTGATAGGTCCTCAGCCCTTTCTGAGAAGGAGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000058548.14 ENSMUST00000203661.3 ENSMUST00000204774.3 |
||
| CDS-3UTR GCA 90 bp | GTCCCTCCTTCTCAGAAAGGGCTGAGGACCTATCAGGAAAGCCCAAGTTCCTCTACAGGAGCAGCACTGTaGCCTGCTCCCGCGCCACGC | + |
|
Preference number: 4 (lower is better) Translates to: VPPSQKGLRTYQESPSSSTGAAL*PAPAPR Trigger: GCGTGGCGCGGGAGCAGGGCACAGTGCTGCTCCTGT...AGAGGAACTTGGGCTTTCCTGATAGGTCCTCAGCCCTTTCTGAGAAGGAGGGAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058548.14 ENSMUST00000203661.3 ENSMUST00000204774.3 |
||
| CDS-3UTR GCA 90 bp | CCTTCTCAGAAAGGGCTGAGGACCTATCAGGAAAGCCCAAGTTCCTCTCAGGAACGAAGGGACGCAGCCTaGGGGTCACCGCTGCAGGCG | + |
|
Preference number: 4 (lower is better) Translates to: PSQKGLRTYQESPSSSQERRDAA*GSPLQA Trigger: CGCCTGCAGCGGTGACCCGCAGGCTGCGTCCCTTCG...TTCCTGAGAGGAACTTGGGCTTTCCTGATAGGTCCTCAGCCCTTTCTGAGAAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000058548.14 ENSMUST00000203661.3 ENSMUST00000204774.3 |
||
| CDS-3UTR GCA 90 bp | GGAAAAATCGTCCCTCCTTCTCAGAAAGGGCTGAGGACCTATCAGGAAAGCCCACGAAGGGACGCAGCCTaGGGGTCACCGCTGCAGGCG | + |
|
Preference number: 4 (lower is better) Translates to: GKIVPPSQKGLRTYQESPRRDAA*GSPLQA Trigger: CGCCTGCAGCGGTGACCCGCAGGCTGCGTCCCTTCG...TGGGCTTTCCTGATAGGTCCTCAGCCCTTTCTGAGAAGGAGGGACGATTTTTCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000058548.14 ENSMUST00000203661.3 ENSMUST00000204774.3 |
||
| CDS-3UTR CCA 90 bp | CCCAAGTTCCTCTCAGGAACTCTAAGAGGGAGCAAATGTGAGGGAGGTTGGTCAAAGCAGGCGGTAGCGTaGCAGAGCGCGCAGCGGCCG | + |
|
Preference number: 4 (lower is better) Translates to: PKFLSGTLRGSKCEGGWSKQAVA*QSAQRP Trigger: CGGCCGCTGCGCGCTCTGCCACGCTACCGCCTGCTT...TGACCAACCTCCCTCACATTTGCTCCCTCTTAGAGTTCCTGAGAGGAACTTGGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058548.14 ENSMUST00000203661.3 ENSMUST00000204774.3 |
||
| CDS-3UTR TCA 90 bp | AGGGCTGAGGACCTATCAGGAAAGCCCAAGTTCCTCTCAGGAACTCTAAGAGGGGGGTTTCGCAGGGTGTaGGTGGGTCCTGCCTCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: RAEDLSGKPKFLSGTLRGGFRRV*VGPASS Trigger: GCTGGAGGCAGGACCCACTCACACCCTGCGAAACCC...CCCTCTTAGAGTTCCTGAGAGGAACTTGGGCTTTCCTGATAGGTCCTCAGCCCT 59% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 3 transcripts: ENSMUST00000058548.14 ENSMUST00000203661.3 ENSMUST00000204774.3 |
||
| CDS-3UTR TCA 90 bp | GAGGGAGGTTGGTCAAGTGTGGGACTTAAGGTGAGTCTTACGGTTTGGGGGACAGGGTTTCGCAGGGTGTaGGTGGGTCCTGCCTCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: EGGWSSVGLKVSLTVWGTGFRRV*VGPASS Trigger: GCTGGAGGCAGGACCCACTCACACCCTGCGAAACCC...TGTCCCCCAAACCGTAAGACTCACCTTAAGTCCCACACTTGACCAACCTCCCTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000058548.14 ENSMUST00000203661.3 ENSMUST00000204774.3 |
||
| CDS-3UTR GCA 90 bp | AGGGCTGAGGACCTATCAGGAAAGCCCAAGTTCCTCTCAGGAACTCTAAGAGGGGGTGTGAGTGGGTCCTaGCTCCAGCAGAGGGAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: RAEDLSGKPKFLSGTLRGGVSGS*LQQREA Trigger: GGCCTCCCTCTGCTGGAGGCAGGACCCACTCACACC...CCCTCTTAGAGTTCCTGAGAGGAACTTGGGCTTTCCTGATAGGTCCTCAGCCCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000058548.14 ENSMUST00000203661.3 ENSMUST00000204774.3 |
||
| CDS-3UTR GCA 90 bp | GAGGGAGGTTGGTCAAGTGTGGGACTTAAGGTGAGTCTTACGGTTTGGGGGACAGGTGTGAGTGGGTCCTaGCTCCAGCAGAGGGAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: EGGWSSVGLKVSLTVWGTGVSGS*LQQREA Trigger: GGCCTCCCTCTGCTGGAGGCAGGACCCACTCACACC...TGTCCCCCAAACCGTAAGACTCACCTTAAGTCCCACACTTGACCAACCTCCCTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000058548.14 ENSMUST00000203661.3 ENSMUST00000204774.3 |
||
| CDS-3UTR TCA 90 bp | TGGAAAAATCGTCCCTCCTTCTCAGAAAGGGCTGAGGACCTATCAGGAAAGCCCGGGTTTCGCAGGGTGTaGGTGGGTCCTGCCTCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: WKNRPSFSERAEDLSGKPGFRRV*VGPASS Trigger: GCTGGAGGCAGGACCCACTCACACCCTGCGAAACCC...GGGCTTTCCTGATAGGTCCTCAGCCCTTTCTGAGAAGGAGGGACGATTTTTCCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000058548.14 ENSMUST00000203661.3 ENSMUST00000204774.3 |
||
| CDS-3UTR CCA 90 bp | AATGGAAAAATCGTCCCTCCTTCTCAGAAAGGGCTGAGGACCTATCAGGAAAGCAAGCAGGCGGTAGCGTaGCAGAGCGCGCAGCGGCCG | + |
|
Preference number: 4 (lower is better) Translates to: NGKIVPPSQKGLRTYQESKQAVA*QSAQRP Trigger: CGGCCGCTGCGCGCTCTGCCACGCTACCGCCTGCTT...GCTTTCCTGATAGGTCCTCAGCCCTTTCTGAGAAGGAGGGACGATTTTTCCATT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000058548.14 ENSMUST00000203661.3 ENSMUST00000204774.3 |
||
| CDS-3UTR GCA 90 bp | GGGAGCAAATGTGAGGGAGGTTGGTCAAGTGTGGGACTTAAGGTGAGTCTTACGAGGCTGAGCATCCAGTaGTCTCAGCAGGCGCGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: GSKCEGGWSSVGLKVSLTRLSIQ*SQQARQ Trigger: CTGCCGCGCCTGCTGAGAGCACTGGATGCTCAGCCT...CGTAAGACTCACCTTAAGTCCCACACTTGACCAACCTCCCTCACATTTGCTCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058548.14 ENSMUST00000203661.3 ENSMUST00000204774.3 |
||
| CDS-3UTR CCA 90 bp | CCTTCTCAGAAAGGGCTGAGGACCTATCAGGAAAGCCCAAGTTCCTCTCAGGAAGTGCGTTGGCCTCTGTaGGAGATGGCTGAGGAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: PSQKGLRTYQESPSSSQEVRWPL*EMAEEG Trigger: CCCCTCCTCAGCCATCTCCCACAGAGGCCAACGCAC...TTCCTGAGAGGAACTTGGGCTTTCCTGATAGGTCCTCAGCCCTTTCTGAGAAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058548.14 ENSMUST00000203661.3 ENSMUST00000204774.3 |
||
| CDS-3UTR CCA 90 bp | TGTGAGGGAGGTTGGTCAAGTGTGGGACTTAAGGTGAGTCTTACGGTTTGGGGGGGCCTCCAGTTTCAGTaGGCAGCGGAGTGTCAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: CEGGWSSVGLKVSLTVWGGLQFQ*AAECQS Trigger: GCTCTGACACTCCGCTGCCCACTGAAACTGGAGGCC...CCCCCAAACCGTAAGACTCACCTTAAGTCCCACACTTGACCAACCTCCCTCACA 57% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt. Matches the following 3 transcripts: ENSMUST00000058548.14 ENSMUST00000203661.3 ENSMUST00000204774.3 |
||
| CDS-3UTR CCA 90 bp | GCACCCCCAAAGAGTACATGTGTGAGGCCTCATTCTGGAGTTCCTGCTGTTGCTGGCCTCCAGTTTCAGTaGGCAGCGGAGTGTCAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: APPKSTCVRPHSGVPAVAGLQFQ*AAECQS Trigger: GCTCTGACACTCCGCTGCCCACTGAAACTGGAGGCC...AGCAACAGCAGGAACTCCAGAATGAGGCCTCACACATGTACTCTTTGGGGGTGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000058548.14 ENSMUST00000203661.3 ENSMUST00000204774.3 |
||
| CDS-3UTR CCA 90 bp | GTCCCTCCTTCTCAGAAAGGGCTGAGGACCTATCAGGAAAGCCCAAGTTCCTCTATCCGGCCCCAAACCTaGGTCACTCCAGGCAGCACT | + |
|
Preference number: 4 (lower is better) Translates to: VPPSQKGLRTYQESPSSSIRPQT*VTPGST Trigger: AGTGCTGCCTGGAGTGACCCAGGTTTGGGGCCGGAT...AGAGGAACTTGGGCTTTCCTGATAGGTCCTCAGCCCTTTCTGAGAAGGAGGGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000058548.14 ENSMUST00000203661.3 ENSMUST00000204774.3 |
||
| CDS-3UTR CCA 90 bp | AGAAATGGAAAAATCGTCCCTCCTTCTCAGAAAGGGCTGAGGACCTATCAGGAAAAGCAGGCGGTAGCGTaGCAGAGCGCGCAGCGGCCG | + |
|
Preference number: 4 (lower is better) Translates to: RNGKIVPPSQKGLRTYQEKQAVA*QSAQRP Trigger: CGGCCGCTGCGCGCTCTGCCACGCTACCGCCTGCTT...TTCCTGATAGGTCCTCAGCCCTTTCTGAGAAGGAGGGACGATTTTTCCATTTCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000058548.14 ENSMUST00000203661.3 ENSMUST00000204774.3 |
||
| 3UTR CAA 72 bp | AGGATATACCATCCTTCTGACTCCTGTGCTGTGGCGTaGGGAAGGGTTTCGCAGGGTGTGAGTGGGTCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: RIYHPSDSCAVA*GRVSQGVSGSC Trigger: GCAGGACCCACTCACACCCTGCGAAACCCTTCCCAACGCCACAGCACAGGAGTCAGAAGGATGGTATATCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203281.3 |
||
| CDS-3UTR TCA 90 bp | ACTCTAAGAGGGAGCAAATGTGAGGGAGGTTGGTCAAGTGTGGGACTTAAGGTGGCTAGGGTGGCAGGCTaGGCATCCAGTGCTCTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: TLRGSKCEGGWSSVGLKVARVAG*ASSALS Trigger: GCTGAGAGCACTGGATGCTCAGCCTGCCACCCTAGC...CACCTTAAGTCCCACACTTGACCAACCTCCCTCACATTTGCTCCCTCTTAGAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058548.14 ENSMUST00000203661.3 ENSMUST00000204774.3 |
||
| CDS-3UTR GCA 90 bp | CCCTCCTTCTCAGAAAGGGCTGAGGACCTATCAGGAAAGCCCAAGTTCCTCTCAGTCACCCGAACAGCCTaGACCTCGGGCAGCAAATCA | + |
|
Preference number: 4 (lower is better) Translates to: PSFSERAEDLSGKPKFLSVTRTA*TSGSKS Trigger: TGATTTGCTGCCCGAGGTGCAGGCTGTTCGGGTGAC...TGAGAGGAACTTGGGCTTTCCTGATAGGTCCTCAGCCCTTTCTGAGAAGGAGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058548.14 ENSMUST00000203661.3 ENSMUST00000204774.3 |
||
| CDS-3UTR GCA 90 bp | GTCCCTCCTTCTCAGAAAGGGCTGAGGACCTATCAGGAAAGCCCAAGTTCCTCTGGGCCTGGGTATCCATaGTCACAGTCCAGGATGGGA | + |
|
Preference number: 4 (lower is better) Translates to: VPPSQKGLRTYQESPSSSGPGYP*SQSRMG Trigger: TCCCATCCTGGACTGTGAGCATGGATACCCAGGCCC...AGAGGAACTTGGGCTTTCCTGATAGGTCCTCAGCCCTTTCTGAGAAGGAGGGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058548.14 ENSMUST00000203661.3 ENSMUST00000204774.3 |
||
| CDS-3UTR CCA 90 bp | GAGGACCTATCAGGAAAGCCCAAGTTCCTCTCAGGAACTCTAAGAGGGAGCAAAGTGCGTTGGCCTCTGTaGGAGATGGCTGAGGAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: EDLSGKPKFLSGTLRGSKVRWPL*EMAEEG Trigger: CCCCTCCTCAGCCATCTCCCACAGAGGCCAACGCAC...TTTGCTCCCTCTTAGAGTTCCTGAGAGGAACTTGGGCTTTCCTGATAGGTCCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058548.14 ENSMUST00000203661.3 ENSMUST00000204774.3 |
||
| CDS-3UTR CCA 90 bp | GCTGAGGACCTATCAGGAAAGCCCAAGTTCCTCTCAGGAACTCTAAGAGGGAGCGCCCTTTTGGTGCGTTaGCCTCTGTGGGAGATGGCT | + |
|
Preference number: 4 (lower is better) Translates to: AEDLSGKPKFLSGTLRGSALLVR*PLWEMA Trigger: AGCCATCTCCCACAGAGGCCAACGCACCAAAAGGGC...GCTCCCTCTTAGAGTTCCTGAGAGGAACTTGGGCTTTCCTGATAGGTCCTCAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000058548.14 ENSMUST00000203661.3 ENSMUST00000204774.3 |
||
| CDS-3UTR CCA 90 bp | GGGAGCAAATGTGAGGGAGGTTGGTCAAGTGTGGGACTTAAGGTGAGTCTTACGAAGGCTGGGCCCTTTTaGTGCGTTGGCCTCTGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: GSKCEGGWSSVGLKVSLTKAGPF*CVGLCG Trigger: CCCACAGAGGCCAACGCACCAAAAGGGCCCAGCCTT...CGTAAGACTCACCTTAAGTCCCACACTTGACCAACCTCCCTCACATTTGCTCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000058548.14 ENSMUST00000203661.3 ENSMUST00000204774.3 |
||
| CDS-3UTR CCA 90 bp | TCTGGACGAGGCCTCCCTCTGGGGAAGGTGAGGGACTCCTGGCTGACGGGGTTTCCAGACACAATTTTCTaGGTATCAAAAGGGCTACTC | + |
|
Preference number: 4 (lower is better) Translates to: SGRGLPLGKVRDSWLTGFPDTIF*VSKGLL Trigger: GAGTAGCCCTTTTGATACCCAGAAAATTGTGTCTGG...AAACCCCGTCAGCCAGGAGTCCCTCACCTTCCCCAGAGGGAGGCCTCGTCCAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000058548.14 |
||
| CDS-3UTR CCA 90 bp | GCTGAGGACCTATCAGGAAAGCCCAAGTTCCTCTCAGGAACTCTAAGAGGGAGCGTCAGCTGCTGGGCCTaGGTATCCATGCTCACAGTC | + |
|
Preference number: 4 (lower is better) Translates to: AEDLSGKPKFLSGTLRGSVSCWA*VSMLTV Trigger: GACTGTGAGCATGGATACCCAGGCCCAGCAGCTGAC...GCTCCCTCTTAGAGTTCCTGAGAGGAACTTGGGCTTTCCTGATAGGTCCTCAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058548.14 ENSMUST00000203661.3 ENSMUST00000204774.3 |
||
| CDS-3UTR CCA 90 bp | CCTTCTCAGAAAGGGCTGAGGACCTATCAGGAAAGCCCAAGTTCCTCTCAGGAAATCCGGCCCCAAACCTaGGTCACTCCAGGCAGCACT | + |
|
Preference number: 4 (lower is better) Translates to: PSQKGLRTYQESPSSSQEIRPQT*VTPGST Trigger: AGTGCTGCCTGGAGTGACCCAGGTTTGGGGCCGGAT...TTCCTGAGAGGAACTTGGGCTTTCCTGATAGGTCCTCAGCCCTTTCTGAGAAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000058548.14 ENSMUST00000203661.3 ENSMUST00000204774.3 |
||
| CDS-3UTR CCA 90 bp | AACAAATCAAACTACCTCTGGACGAGGCCTCCCTCTGGGGAAGGTGAGGGACTCACTGAGCCCTGGGTCTaGCTGATGCTGTACACAGGA | + |
|
Preference number: 4 (lower is better) Translates to: NKSNYLWTRPPSGEGEGLTEPWV*LMLYTG Trigger: TCCTGTGTACAGCATCAGCCAGACCCAGGGCTCAGT...GAGTCCCTCACCTTCCCCAGAGGGAGGCCTCGTCCAGAGGTAGTTTGATTTGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058548.14 |
||
| CDS-3UTR CCA 90 bp | GTCCCTCCTTCTCAGAAAGGGCTGAGGACCTATCAGGAAAGCCCAAGTTCCTCTACTGGGACTGAGCCCTaGGTCTGGCTGATGCTGTAC | + |
|
Preference number: 4 (lower is better) Translates to: VPPSQKGLRTYQESPSSSTGTEP*VWLMLY Trigger: GTACAGCATCAGCCAGACCCAGGGCTCAGTCCCAGT...AGAGGAACTTGGGCTTTCCTGATAGGTCCTCAGCCCTTTCTGAGAAGGAGGGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058548.14 ENSMUST00000203661.3 ENSMUST00000204774.3 |
||
| CDS-3UTR CCA 90 bp | AGGGCTGAGGACCTATCAGGAAAGCCCAAGTTCCTCTCAGGAACTCTAAGAGGGACTGGGACTGAGCCCTaGGTCTGGCTGATGCTGTAC | + |
|
Preference number: 4 (lower is better) Translates to: RAEDLSGKPKFLSGTLRGTGTEP*VWLMLY Trigger: GTACAGCATCAGCCAGACCCAGGGCTCAGTCCCAGT...CCCTCTTAGAGTTCCTGAGAGGAACTTGGGCTTTCCTGATAGGTCCTCAGCCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058548.14 ENSMUST00000203661.3 ENSMUST00000204774.3 |
||
| CDS-3UTR TCA 90 bp | CCTTCTCAGAAAGGGCTGAGGACCTATCAGGAAAGCCCAAGTTCCTCTCAGGAACACTCCAGGCAGCACTaGAGGTGGCATATGTCCTCG | + |
|
Preference number: 4 (lower is better) Translates to: PSQKGLRTYQESPSSSQEHSRQH*RWHMSS Trigger: CGAGGACATATGCCACCTTCAGTGCTGCCTGGAGTG...TTCCTGAGAGGAACTTGGGCTTTCCTGATAGGTCCTCAGCCCTTTCTGAGAAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058548.14 ENSMUST00000203661.3 ENSMUST00000204774.3 |
||
| CDS-3UTR TCA 90 bp | CCCAAGTTCCTCTCAGGAACTCTAAGAGGGAGCAAATGTGAGGGAGGTTGGTCACACTCCAGGCAGCACTaGAGGTGGCATATGTCCTCG | + |
|
Preference number: 4 (lower is better) Translates to: PKFLSGTLRGSKCEGGWSHSRQH*RWHMSS Trigger: CGAGGACATATGCCACCTTCAGTGCTGCCTGGAGTG...TGACCAACCTCCCTCACATTTGCTCCCTCTTAGAGTTCCTGAGAGGAACTTGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058548.14 ENSMUST00000203661.3 ENSMUST00000204774.3 |
||
| CDS-3UTR TCA 90 bp | AGCAAATGTGAGGGAGGTTGGTCAAGTGTGGGACTTAAGGTGAGTCTTACGGTTGCTAGGGTGGCAGGCTaGGCATCCAGTGCTCTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: SKCEGGWSSVGLKVSLTVARVAG*ASSALS Trigger: GCTGAGAGCACTGGATGCTCAGCCTGCCACCCTAGC...AACCGTAAGACTCACCTTAAGTCCCACACTTGACCAACCTCCCTCACATTTGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058548.14 ENSMUST00000203661.3 ENSMUST00000204774.3 |
||
| CDS-3UTR GCA 90 bp | GGAAAGCCCAAGTTCCTCTCAGGAACTCTAAGAGGGAGCAAATGTGAGGGAGGTGGGCCTGGGTATCCATaGTCACAGTCCAGGATGGGA | + |
|
Preference number: 4 (lower is better) Translates to: GKPKFLSGTLRGSKCEGGGPGYP*SQSRMG Trigger: TCCCATCCTGGACTGTGAGCATGGATACCCAGGCCC...ACCTCCCTCACATTTGCTCCCTCTTAGAGTTCCTGAGAGGAACTTGGGCTTTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058548.14 ENSMUST00000203661.3 ENSMUST00000204774.3 |
||
| CDS-3UTR GCA 90 bp | AGCAAATGTGAGGGAGGTTGGTCAAGTGTGGGACTTAAGGTGAGTCTTACGGTTAGGCTGAGCATCCAGTaGTCTCAGCAGGCGCGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: SKCEGGWSSVGLKVSLTVRLSIQ*SQQARQ Trigger: CTGCCGCGCCTGCTGAGAGCACTGGATGCTCAGCCT...AACCGTAAGACTCACCTTAAGTCCCACACTTGACCAACCTCCCTCACATTTGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058548.14 ENSMUST00000203661.3 ENSMUST00000204774.3 |
||
| CDS-3UTR GCA 90 bp | AGTGGTCCAATGCGTGCTACGTGCGTCCCTTCCCAGAGATCCACGATCACGTCGGGAATGGCTCAAAGCTaGTCTTCCTACCAGCAAAAC | + |
|
Preference number: 4 (lower is better) Translates to: SGPMRATCVPSQRSTITSGMAQS*SSYQQN Trigger: GTTTTGCTGGTAGGAAGAGCAGCTTTGAGCCATTCC...CGACGTGATCGTGGATCTCTGGGAAGGGACGCACGTAGCACGCATTGGACCACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203281.3 |
||
| CDS-3UTR CCA 90 bp | CCCAAGTTCCTCTCAGGAACTCTAAGAGGGAGCAAATGTGAGGGAGGTTGGTCAGGCCTCTGTGGGAGATaGCTGAGGAGGGGATGGAAA | + |
|
Preference number: 4 (lower is better) Translates to: PKFLSGTLRGSKCEGGWSGLCGR*LRRGWK Trigger: TTTCCATCCCCTCCTCAGCCATCTCCCACAGAGGCC...TGACCAACCTCCCTCACATTTGCTCCCTCTTAGAGTTCCTGAGAGGAACTTGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000058548.14 ENSMUST00000203661.3 ENSMUST00000204774.3 |
||
| CDS-3UTR CCA 90 bp | GGAAAGCCCAAGTTCCTCTCAGGAACTCTAAGAGGGAGCAAATGTGAGGGAGGTGGCCTCTGTGGGAGATaGCTGAGGAGGGGATGGAAA | + |
|
Preference number: 4 (lower is better) Translates to: GKPKFLSGTLRGSKCEGGGLCGR*LRRGWK Trigger: TTTCCATCCCCTCCTCAGCCATCTCCCACAGAGGCC...ACCTCCCTCACATTTGCTCCCTCTTAGAGTTCCTGAGAGGAACTTGGGCTTTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000058548.14 ENSMUST00000203661.3 ENSMUST00000204774.3 |
||
| CDS-3UTR CCA 90 bp | GGAAAAATCGTCCCTCCTTCTCAGAAAGGGCTGAGGACCTATCAGGAAAGCCCAGGCCTCTGTGGGAGATaGCTGAGGAGGGGATGGAAA | + |
|
Preference number: 4 (lower is better) Translates to: GKIVPPSQKGLRTYQESPGLCGR*LRRGWK Trigger: TTTCCATCCCCTCCTCAGCCATCTCCCACAGAGGCC...TGGGCTTTCCTGATAGGTCCTCAGCCCTTTCTGAGAAGGAGGGACGATTTTTCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000058548.14 ENSMUST00000203661.3 ENSMUST00000204774.3 |
||
| CDS-3UTR CCA 90 bp | GGGAGCAAATGTGAGGGAGGTTGGTCAAGTGTGGGACTTAAGGTGAGTCTTACGGCCCTTTTGGTGCGTTaGCCTCTGTGGGAGATGGCT | + |
|
Preference number: 4 (lower is better) Translates to: GSKCEGGWSSVGLKVSLTALLVR*PLWEMA Trigger: AGCCATCTCCCACAGAGGCCAACGCACCAAAAGGGC...CGTAAGACTCACCTTAAGTCCCACACTTGACCAACCTCCCTCACATTTGCTCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000058548.14 ENSMUST00000203661.3 ENSMUST00000204774.3 |
||
| CDS-3UTR CCA 90 bp | CCCTCCTTCTCAGAAAGGGCTGAGGACCTATCAGGAAAGCCCAAGTTCCTCTCAGCTTCAGGCCAGCTCTaGAAGGGACACTTTTTGCGC | + |
|
Preference number: 4 (lower is better) Translates to: PSFSERAEDLSGKPKFLSASGQL*KGHFLR Trigger: GCGCAAAAAGTGTCCCTTCCAGAGCTGGCCTGAAGC...TGAGAGGAACTTGGGCTTTCCTGATAGGTCCTCAGCCCTTTCTGAGAAGGAGGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000058548.14 ENSMUST00000203661.3 ENSMUST00000204774.3 |
||
| CDS-3UTR CCA 90 bp | CTAAGAGGGAGCAAATGTGAGGGAGGTTGGTCAAGTGTGGGACTTAAGGTGAGTGGCCTCCAGTTTCAGTaGGCAGCGGAGTGTCAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: LRGSKCEGGWSSVGLKVSGLQFQ*AAECQS Trigger: GCTCTGACACTCCGCTGCCCACTGAAACTGGAGGCC...ACTCACCTTAAGTCCCACACTTGACCAACCTCCCTCACATTTGCTCCCTCTTAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058548.14 ENSMUST00000203661.3 ENSMUST00000204774.3 |
||
| CDS-3UTR CCA 90 bp | AAAATCGTCCCTCCTTCTCAGAAAGGGCTGAGGACCTATCAGGAAAGCCCAAGTTTCGCAGGGTGTGAGTaGGTCCTGCCTCCAGCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: KIVPPSQKGLRTYQESPSFAGCE*VLPPAE Trigger: CTCTGCTGGAGGCAGGACCCACTCACACCCTGCGAA...ACTTGGGCTTTCCTGATAGGTCCTCAGCCCTTTCTGAGAAGGAGGGACGATTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000058548.14 ENSMUST00000203661.3 ENSMUST00000204774.3 |
||
| CDS-3UTR CCA 90 bp | GGAAAGCCCAAGTTCCTCTCAGGAACTCTAAGAGGGAGCAAATGTGAGGGAGGTGCTCACAGTCCAGGATaGGAGAGAGCCACTCTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: GKPKFLSGTLRGSKCEGGAHSPG*ERATLV Trigger: CACCAGAGTGGCTCTCTCCCATCCTGGACTGTGAGC...ACCTCCCTCACATTTGCTCCCTCTTAGAGTTCCTGAGAGGAACTTGGGCTTTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058548.14 ENSMUST00000203661.3 ENSMUST00000204774.3 |
||
| CDS-3UTR CCA 90 bp | CCCAAGTTCCTCTCAGGAACTCTAAGAGGGAGCAAATGTGAGGGAGGTTGGTCAGCTCACAGTCCAGGATaGGAGAGAGCCACTCTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: PKFLSGTLRGSKCEGGWSAHSPG*ERATLV Trigger: CACCAGAGTGGCTCTCTCCCATCCTGGACTGTGAGC...TGACCAACCTCCCTCACATTTGCTCCCTCTTAGAGTTCCTGAGAGGAACTTGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058548.14 ENSMUST00000203661.3 ENSMUST00000204774.3 |
||
| CDS-3UTR CCA 90 bp | TGGAAAAATCGTCCCTCCTTCTCAGAAAGGGCTGAGGACCTATCAGGAAAGCCCGTCAGCTGCTGGGCCTaGGTATCCATGCTCACAGTC | + |
|
Preference number: 4 (lower is better) Translates to: WKNRPSFSERAEDLSGKPVSCWA*VSMLTV Trigger: GACTGTGAGCATGGATACCCAGGCCCAGCAGCTGAC...GGGCTTTCCTGATAGGTCCTCAGCCCTTTCTGAGAAGGAGGGACGATTTTTCCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000058548.14 ENSMUST00000203661.3 ENSMUST00000204774.3 |
||
| CDS-3UTR CCA 90 bp | CTAAGAGGGAGCAAATGTGAGGGAGGTTGGTCAAGTGTGGGACTTAAGGTGAGTATCCGGCCCCAAACCTaGGTCACTCCAGGCAGCACT | + |
|
Preference number: 4 (lower is better) Translates to: LRGSKCEGGWSSVGLKVSIRPQT*VTPGST Trigger: AGTGCTGCCTGGAGTGACCCAGGTTTGGGGCCGGAT...ACTCACCTTAAGTCCCACACTTGACCAACCTCCCTCACATTTGCTCCCTCTTAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000058548.14 ENSMUST00000203661.3 ENSMUST00000204774.3 |
||
| CDS-3UTR CCA 90 bp | CCTTCTCAGAAAGGGCTGAGGACCTATCAGGAAAGCCCAAGTTCCTCTCAGGAAACTGGGACTGAGCCCTaGGTCTGGCTGATGCTGTAC | + |
|
Preference number: 4 (lower is better) Translates to: PSQKGLRTYQESPSSSQETGTEP*VWLMLY Trigger: GTACAGCATCAGCCAGACCCAGGGCTCAGTCCCAGT...TTCCTGAGAGGAACTTGGGCTTTCCTGATAGGTCCTCAGCCCTTTCTGAGAAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058548.14 ENSMUST00000203661.3 ENSMUST00000204774.3 |
||
| CDS-3UTR TCA 90 bp | GTCCCTCCTTCTCAGAAAGGGCTGAGGACCTATCAGGAAAGCCCAAGTTCCTCTTCCTCCACACTTTTGTaGCCCTGCTTCAGGGAGATG | + |
|
Preference number: 4 (lower is better) Translates to: VPPSQKGLRTYQESPSSSSSTLL*PCFREM Trigger: CATCTCCCTGAAGCAGGGTCACAAAAGTGTGGAGGA...AGAGGAACTTGGGCTTTCCTGATAGGTCCTCAGCCCTTTCTGAGAAGGAGGGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000058548.14 ENSMUST00000203661.3 ENSMUST00000204774.3 |
||
| CDS-3UTR TCA 90 bp | CCCTCCTTCTCAGAAAGGGCTGAGGACCTATCAGGAAAGCCCAAGTTCCTCTCAGCTGGCTGTAGTCAGTaGAGCGTATTGACTGCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: PSFSERAEDLSGKPKFLSAGCSQ*SVLTAR Trigger: TCTGGCAGTCAATACGCTTCACTGACTACAGCCAGC...TGAGAGGAACTTGGGCTTTCCTGATAGGTCCTCAGCCCTTTCTGAGAAGGAGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058548.14 ENSMUST00000203661.3 ENSMUST00000204774.3 |
||
| CDS-3UTR TCA 90 bp | GGGAGCAAATGTGAGGGAGGTTGGTCAAGTGTGGGACTTAAGGTGAGTCTTACGGGAGTGTCAGAGCCATaGCCATCTGATTGTGCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: GSKCEGGWSSVGLKVSLTGVSEP*PSDCAG Trigger: GCCAGCACAATCAGATGGTCATGGCTCTGACACTCC...CGTAAGACTCACCTTAAGTCCCACACTTGACCAACCTCCCTCACATTTGCTCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058548.14 ENSMUST00000203661.3 ENSMUST00000204774.3 |
||
| CDS-3UTR TCA 90 bp | CCCTCCTTCTCAGAAAGGGCTGAGGACCTATCAGGAAAGCCCAAGTTCCTCTCAGGCAAAATGGACATCTaGCCTCCACACCAGGATGCA | + |
|
Preference number: 4 (lower is better) Translates to: PSFSERAEDLSGKPKFLSGKMDI*PPHQDA Trigger: TGCATCCTGGTGTGGAGGTCAGATGTCCATTTTGCC...TGAGAGGAACTTGGGCTTTCCTGATAGGTCCTCAGCCCTTTCTGAGAAGGAGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000058548.14 ENSMUST00000203661.3 ENSMUST00000204774.3 |
||
| CDS-3UTR TCA 90 bp | CCCTCCTTCTCAGAAAGGGCTGAGGACCTATCAGGAAAGCCCAAGTTCCTCTCATCAAGTTCCAGCAGGTaGCACTGCTCCAGACGGTTT | + |
|
Preference number: 4 (lower is better) Translates to: PSFSERAEDLSGKPKFLSSSSSR*HCSRRF Trigger: AAACCGTCTGGAGCAGTGTCACCTGCTGGAACTTGA...TGAGAGGAACTTGGGCTTTCCTGATAGGTCCTCAGCCCTTTCTGAGAAGGAGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058548.14 ENSMUST00000203661.3 ENSMUST00000204774.3 |
||
| CDS-3UTR CCA 90 bp | GCACCCCCAAAGAGTACATGTGTGAGGCCTCATTCTGGAGTTCCTGCTGTTGCTCCTCTGGAAGGATGCTaGTGTCCTGTGCCTCCAATA | + |
|
Preference number: 4 (lower is better) Translates to: APPKSTCVRPHSGVPAVAPLEGC*CPVPPI Trigger: TATTGGAGGCACAGGACACCAGCATCCTTCCAGAGG...AGCAACAGCAGGAACTCCAGAATGAGGCCTCACACATGTACTCTTTGGGGGTGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000058548.14 ENSMUST00000203661.3 ENSMUST00000204774.3 |
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| CDS-3UTR CCA 90 bp | TGTGAGGGAGGTTGGTCAAGTGTGGGACTTAAGGTGAGTCTTACGGTTTGGGGGCCTCTGGAAGGATGCTaGTGTCCTGTGCCTCCAATA | + |
|
Preference number: 4 (lower is better) Translates to: CEGGWSSVGLKVSLTVWGPLEGC*CPVPPI Trigger: TATTGGAGGCACAGGACACCAGCATCCTTCCAGAGG...CCCCCAAACCGTAAGACTCACCTTAAGTCCCACACTTGACCAACCTCCCTCACA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000058548.14 ENSMUST00000203661.3 ENSMUST00000204774.3 |
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| CDS-3UTR CCA 90 bp | AGAAATGGAAAAATCGTCCCTCCTTCTCAGAAAGGGCTGAGGACCTATCAGGAAGTGCGTTGGCCTCTGTaGGAGATGGCTGAGGAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: RNGKIVPPSQKGLRTYQEVRWPL*EMAEEG Trigger: CCCCTCCTCAGCCATCTCCCACAGAGGCCAACGCAC...TTCCTGATAGGTCCTCAGCCCTTTCTGAGAAGGAGGGACGATTTTTCCATTTCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000058548.14 ENSMUST00000203661.3 ENSMUST00000204774.3 |
||
| CDS-3UTR CCA 90 bp | GAGGACCTATCAGGAAAGCCCAAGTTCCTCTCAGGAACTCTAAGAGGGAGCAAAGCCCTTTTGGTGCGTTaGCCTCTGTGGGAGATGGCT | + |
|
Preference number: 4 (lower is better) Translates to: EDLSGKPKFLSGTLRGSKALLVR*PLWEMA Trigger: AGCCATCTCCCACAGAGGCCAACGCACCAAAAGGGC...TTTGCTCCCTCTTAGAGTTCCTGAGAGGAACTTGGGCTTTCCTGATAGGTCCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000058548.14 ENSMUST00000203661.3 ENSMUST00000204774.3 |
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| CDS-3UTR CCA 90 bp | GGAAAGCCCAAGTTCCTCTCAGGAACTCTAAGAGGGAGCAAATGTGAGGGAGGTGCTTCAGGCCAGCTCTaGAAGGGACACTTTTTGCGC | + |
|
Preference number: 4 (lower is better) Translates to: GKPKFLSGTLRGSKCEGGASGQL*KGHFLR Trigger: GCGCAAAAAGTGTCCCTTCCAGAGCTGGCCTGAAGC...ACCTCCCTCACATTTGCTCCCTCTTAGAGTTCCTGAGAGGAACTTGGGCTTTCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000058548.14 ENSMUST00000203661.3 ENSMUST00000204774.3 |
||
| CDS-3UTR CCA 90 bp | AAGTTCCTCTCAGGAACTCTAAGAGGGAGCAAATGTGAGGGAGGTTGGTCAAGTTTCGCAGGGTGTGAGTaGGTCCTGCCTCCAGCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: KFLSGTLRGSKCEGGWSSFAGCE*VLPPAE Trigger: CTCTGCTGGAGGCAGGACCCACTCACACCCTGCGAA...ACTTGACCAACCTCCCTCACATTTGCTCCCTCTTAGAGTTCCTGAGAGGAACTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058548.14 ENSMUST00000203661.3 ENSMUST00000204774.3 |
||
| CDS-3UTR CCA 90 bp | GAGGACCTATCAGGAAAGCCCAAGTTCCTCTCAGGAACTCTAAGAGGGAGCAAAGTCAGCTGCTGGGCCTaGGTATCCATGCTCACAGTC | + |
|
Preference number: 4 (lower is better) Translates to: EDLSGKPKFLSGTLRGSKVSCWA*VSMLTV Trigger: GACTGTGAGCATGGATACCCAGGCCCAGCAGCTGAC...TTTGCTCCCTCTTAGAGTTCCTGAGAGGAACTTGGGCTTTCCTGATAGGTCCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058548.14 ENSMUST00000203661.3 ENSMUST00000204774.3 |
||
| CDS-3UTR CCA 90 bp | GGAAAAATCGTCCCTCCTTCTCAGAAAGGGCTGAGGACCTATCAGGAAAGCCCAACTGAGCCCTGGGTCTaGCTGATGCTGTACACAGGA | + |
|
Preference number: 4 (lower is better) Translates to: GKIVPPSQKGLRTYQESPTEPWV*LMLYTG Trigger: TCCTGTGTACAGCATCAGCCAGACCCAGGGCTCAGT...TGGGCTTTCCTGATAGGTCCTCAGCCCTTTCTGAGAAGGAGGGACGATTTTTCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000058548.14 ENSMUST00000203661.3 ENSMUST00000204774.3 |
||
| CDS-3UTR CCA 90 bp | CAGGATGGGAGAGAGCCACTCTGGTGGGGACATTCAACGTGGCTGCTGTTTTCATACCTCCACTGGGAATaGCTCAAAGCTGCTCTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: QDGREPLWWGHSTWLLFSYLHWE*LKAALP Trigger: AGGAAGAGCAGCTTTGAGCCATTCCCAGTGGAGGTA...TGAAAACAGCAGCCACGTTGAATGTCCCCACCAGAGTGGCTCTCTCCCATCCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000203281.3 |
||
| CDS-3UTR TCA 90 bp | TGGAAAAATCGTCCCTCCTTCTCAGAAAGGGCTGAGGACCTATCAGGAAAGCCCTCCTCCACACTTTTGTaGCCCTGCTTCAGGGAGATG | + |
|
Preference number: 4 (lower is better) Translates to: WKNRPSFSERAEDLSGKPSSTLL*PCFREM Trigger: CATCTCCCTGAAGCAGGGTCACAAAAGTGTGGAGGA...GGGCTTTCCTGATAGGTCCTCAGCCCTTTCTGAGAAGGAGGGACGATTTTTCCA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000058548.14 ENSMUST00000203661.3 ENSMUST00000204774.3 |
||
| CDS-3UTR TCA 90 bp | CTAAGAGGGAGCAAATGTGAGGGAGGTTGGTCAAGTGTGGGACTTAAGGTGAGTGGAGTGTCAGAGCCATaGCCATCTGATTGTGCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: LRGSKCEGGWSSVGLKVSGVSEP*PSDCAG Trigger: GCCAGCACAATCAGATGGTCATGGCTCTGACACTCC...ACTCACCTTAAGTCCCACACTTGACCAACCTCCCTCACATTTGCTCCCTCTTAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058548.14 ENSMUST00000203661.3 ENSMUST00000204774.3 |
||
| CDS-3UTR TCA 90 bp | GCTGAGGACCTATCAGGAAAGCCCAAGTTCCTCTCAGGAACTCTAAGAGGGAGCGATATACCATCCTTCTaGCTCCTGTGCTGTGGCGTT | + |
|
Preference number: 4 (lower is better) Translates to: AEDLSGKPKFLSGTLRGSDIPSF*LLCCGV Trigger: AACGCCACAGCACAGGAGTCAGAAGGATGGTATATC...GCTCCCTCTTAGAGTTCCTGAGAGGAACTTGGGCTTTCCTGATAGGTCCTCAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058548.14 ENSMUST00000203661.3 ENSMUST00000204774.3 |
||
| CDS-3UTR TCA 90 bp | AATGGAAAAATCGTCCCTCCTTCTCAGAAAGGGCTGAGGACCTATCAGGAAAGCCACTCCAGGCAGCACTaGAGGTGGCATATGTCCTCG | + |
|
Preference number: 4 (lower is better) Translates to: NGKIVPPSQKGLRTYQESHSRQH*RWHMSS Trigger: CGAGGACATATGCCACCTTCAGTGCTGCCTGGAGTG...GCTTTCCTGATAGGTCCTCAGCCCTTTCTGAGAAGGAGGGACGATTTTTCCATT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000058548.14 ENSMUST00000203661.3 ENSMUST00000204774.3 |
||
| CDS-3UTR TCA 90 bp | GGAAAGCCCAAGTTCCTCTCAGGAACTCTAAGAGGGAGCAAATGTGAGGGAGGTGGCAAAATGGACATCTaGCCTCCACACCAGGATGCA | + |
|
Preference number: 4 (lower is better) Translates to: GKPKFLSGTLRGSKCEGGGKMDI*PPHQDA Trigger: TGCATCCTGGTGTGGAGGTCAGATGTCCATTTTGCC...ACCTCCCTCACATTTGCTCCCTCTTAGAGTTCCTGAGAGGAACTTGGGCTTTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000058548.14 ENSMUST00000203661.3 ENSMUST00000204774.3 |
||
| CDS-3UTR TCA 90 bp | AAAAGAAATGGAAAAATCGTCCCTCCTTCTCAGAAAGGGCTGAGGACCTATCAGGCTAGGGTGGCAGGCTaGGCATCCAGTGCTCTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: KRNGKIVPPSQKGLRTYQARVAG*ASSALS Trigger: GCTGAGAGCACTGGATGCTCAGCCTGCCACCCTAGC...CTGATAGGTCCTCAGCCCTTTCTGAGAAGGAGGGACGATTTTTCCATTTCTTTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000058548.14 ENSMUST00000203661.3 ENSMUST00000204774.3 |
||
| CDS-3UTR TCA 90 bp | CCTTCTCAGAAAGGGCTGAGGACCTATCAGGAAAGCCCAAGTTCCTCTCAGGAATCAAGTTCCAGCAGGTaGCACTGCTCCAGACGGTTT | + |
|
Preference number: 4 (lower is better) Translates to: PSQKGLRTYQESPSSSQESSSSR*HCSRRF Trigger: AAACCGTCTGGAGCAGTGTCACCTGCTGGAACTTGA...TTCCTGAGAGGAACTTGGGCTTTCCTGATAGGTCCTCAGCCCTTTCTGAGAAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058548.14 ENSMUST00000203661.3 ENSMUST00000204774.3 |
||
| CDS-3UTR TCA 90 bp | TTACGGTTTGGGGGACAAGAAGCACCCCCAAAGAGTACATGTGTGAGGCCTCATTCAAGTTCCAGCAGGTaGCACTGCTCCAGACGGTTT | + |
|
Preference number: 4 (lower is better) Translates to: LRFGGQEAPPKSTCVRPHSSSSR*HCSRRF Trigger: AAACCGTCTGGAGCAGTGTCACCTGCTGGAACTTGA...ATGAGGCCTCACACATGTACTCTTTGGGGGTGCTTCTTGTCCCCCAAACCGTAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000058548.14 ENSMUST00000203661.3 ENSMUST00000204774.3 |
||
| CDS-3UTR GCA 90 bp | AACAAATCAAACTACCTCTGGACGAGGCCTCCCTCTGGGGAAGGTGAGGGACTCGTCTTCACATTCCAGTaGCCACTGATAACAAAGGCG | + |
|
Preference number: 4 (lower is better) Translates to: NKSNYLWTRPPSGEGEGLVFTFQ*PLITKA Trigger: CGCCTTTGTTATCAGTGGGCACTGGAATGTGAAGAC...GAGTCCCTCACCTTCCCCAGAGGGAGGCCTCGTCCAGAGGTAGTTTGATTTGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058548.14 |
||
| CDS-3UTR GCA 90 bp | AGCAAATGTGAGGGAGGTTGGTCAAGTGTGGGACTTAAGGTGAGTCTTACGGTTGGGCCTGGGTATCCATaGTCACAGTCCAGGATGGGA | + |
|
Preference number: 4 (lower is better) Translates to: SKCEGGWSSVGLKVSLTVGPGYP*SQSRMG Trigger: TCCCATCCTGGACTGTGAGCATGGATACCCAGGCCC...AACCGTAAGACTCACCTTAAGTCCCACACTTGACCAACCTCCCTCACATTTGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058548.14 ENSMUST00000203661.3 ENSMUST00000204774.3 |
||
| CDS-3UTR CCA 90 bp | ACTCTAAGAGGGAGCAAATGTGAGGGAGGTTGGTCAAGTGTGGGACTTAAGGTGGCTTCAGGCCAGCTCTaGAAGGGACACTTTTTGCGC | + |
|
Preference number: 4 (lower is better) Translates to: TLRGSKCEGGWSSVGLKVASGQL*KGHFLR Trigger: GCGCAAAAAGTGTCCCTTCCAGAGCTGGCCTGAAGC...CACCTTAAGTCCCACACTTGACCAACCTCCCTCACATTTGCTCCCTCTTAGAGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000058548.14 ENSMUST00000203661.3 ENSMUST00000204774.3 |
||
| CDS-3UTR CCA 90 bp | GAGGACCTATCAGGAAAGCCCAAGTTCCTCTCAGGAACTCTAAGAGGGAGCAAAACTGAGCCCTGGGTCTaGCTGATGCTGTACACAGGA | + |
|
Preference number: 4 (lower is better) Translates to: EDLSGKPKFLSGTLRGSKTEPWV*LMLYTG Trigger: TCCTGTGTACAGCATCAGCCAGACCCAGGGCTCAGT...TTTGCTCCCTCTTAGAGTTCCTGAGAGGAACTTGGGCTTTCCTGATAGGTCCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000058548.14 ENSMUST00000203661.3 ENSMUST00000204774.3 |
||
| CDS-3UTR CCA 90 bp | TGTGAGGGAGGTTGGTCAAGTGTGGGACTTAAGGTGAGTCTTACGGTTTGGGGGTGCTTCCAGGCAAAATaGACATCTGACCTCCACACC | + |
|
Preference number: 4 (lower is better) Translates to: CEGGWSSVGLKVSLTVWGCFQAK*TSDLHT Trigger: GGTGTGGAGGTCAGATGTCCATTTTGCCTGGAAGCA...CCCCCAAACCGTAAGACTCACCTTAAGTCCCACACTTGACCAACCTCCCTCACA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000058548.14 ENSMUST00000203661.3 ENSMUST00000204774.3 |
||
| CDS-3UTR TCA 90 bp | AATGGAAAAATCGTCCCTCCTTCTCAGAAAGGGCTGAGGACCTATCAGGAAAGCGGAGTGTCAGAGCCATaGCCATCTGATTGTGCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: NGKIVPPSQKGLRTYQESGVSEP*PSDCAG Trigger: GCCAGCACAATCAGATGGTCATGGCTCTGACACTCC...GCTTTCCTGATAGGTCCTCAGCCCTTTCTGAGAAGGAGGGACGATTTTTCCATT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000058548.14 ENSMUST00000203661.3 ENSMUST00000204774.3 |
||
| CDS-3UTR TCA 90 bp | GGGAGCAAATGTGAGGGAGGTTGGTCAAGTGTGGGACTTAAGGTGAGTCTTACGGATATACCATCCTTCTaGCTCCTGTGCTGTGGCGTT | + |
|
Preference number: 4 (lower is better) Translates to: GSKCEGGWSSVGLKVSLTDIPSF*LLCCGV Trigger: AACGCCACAGCACAGGAGTCAGAAGGATGGTATATC...CGTAAGACTCACCTTAAGTCCCACACTTGACCAACCTCCCTCACATTTGCTCCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058548.14 ENSMUST00000203661.3 ENSMUST00000204774.3 |
||
| CDS-3UTR TCA 90 bp | CTAAGAGGGAGCAAATGTGAGGGAGGTTGGTCAAGTGTGGGACTTAAGGTGAGTGGCAAAATGGACATCTaGCCTCCACACCAGGATGCA | + |
|
Preference number: 4 (lower is better) Translates to: LRGSKCEGGWSSVGLKVSGKMDI*PPHQDA Trigger: TGCATCCTGGTGTGGAGGTCAGATGTCCATTTTGCC...ACTCACCTTAAGTCCCACACTTGACCAACCTCCCTCACATTTGCTCCCTCTTAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000058548.14 ENSMUST00000203661.3 ENSMUST00000204774.3 |
||
| CDS-3UTR GCA 90 bp | CCCTCCTTCTCAGAAAGGGCTGAGGACCTATCAGGAAAGCCCAAGTTCCTCTCAAGGCCTCTATGCACATaGAGGGCAGAAGGAATTCAT | + |
|
Preference number: 4 (lower is better) Translates to: PSFSERAEDLSGKPKFLSRPLCT*RAEGIH Trigger: ATGAATTCCTTCTGCCCTGCATGTGCATAGAGGCCT...TGAGAGGAACTTGGGCTTTCCTGATAGGTCCTCAGCCCTTTCTGAGAAGGAGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058548.14 ENSMUST00000203661.3 ENSMUST00000204774.3 |
||
| CDS-3UTR CCA 90 bp | GAGGACCTATCAGGAAAGCCCAAGTTCCTCTCAGGAACTCTAAGAGGGAGCAAACCTCTGGAAGGATGCTaGTGTCCTGTGCCTCCAATA | + |
|
Preference number: 4 (lower is better) Translates to: EDLSGKPKFLSGTLRGSKPLEGC*CPVPPI Trigger: TATTGGAGGCACAGGACACCAGCATCCTTCCAGAGG...TTTGCTCCCTCTTAGAGTTCCTGAGAGGAACTTGGGCTTTCCTGATAGGTCCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058548.14 ENSMUST00000203661.3 ENSMUST00000204774.3 |
||
| CDS-3UTR CCA 90 bp | GAGGGAGGTTGGTCAAGTGTGGGACTTAAGGTGAGTCTTACGGTTTGGGGGACAGGGATGGAAATTCGATaGCTTTCCTCAGACAGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: EGGWSSVGLKVSLTVWGTGMEIR*LSSDRE Trigger: TTCCCTGTCTGAGGAAAGCCATCGAATTTCCATCCC...TGTCCCCCAAACCGTAAGACTCACCTTAAGTCCCACACTTGACCAACCTCCCTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000058548.14 ENSMUST00000203661.3 ENSMUST00000204774.3 |
||
| CDS-3UTR CCA 90 bp | AAAAGAAATGGAAAAATCGTCCCTCCTTCTCAGAAAGGGCTGAGGACCTATCAGAAGGCTGGGCCCTTTTaGTGCGTTGGCCTCTGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: KRNGKIVPPSQKGLRTYQKAGPF*CVGLCG Trigger: CCCACAGAGGCCAACGCACCAAAAGGGCCCAGCCTT...CTGATAGGTCCTCAGCCCTTTCTGAGAAGGAGGGACGATTTTTCCATTTCTTTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000058548.14 ENSMUST00000203661.3 ENSMUST00000204774.3 |
||
| CDS-3UTR CCA 90 bp | TGTGAGGGAGGTTGGTCAAGTGTGGGACTTAAGGTGAGTCTTACGGTTTGGGGGCTTGGTAGTCATCTTTaGCAGCCTCAAGTTCCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: CEGGWSSVGLKVSLTVWGLGSHL*QPQVPA Trigger: TGCTGGAACTTGAGGCTGCCAAAGATGACTACCAAG...CCCCCAAACCGTAAGACTCACCTTAAGTCCCACACTTGACCAACCTCCCTCACA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000058548.14 ENSMUST00000203661.3 ENSMUST00000204774.3 |
||
| CDS-3UTR CCA 90 bp | TGCAGGAATAGTCACCCGAACAGCCTGCACCTCGGGCAGCAAATCAAAGGAGAAAATCCATACCTCCACTaGGAATGGCTCAAAGCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: CRNSHPNSLHLGQQIKGENPYLH*EWLKAA Trigger: AGCAGCTTTGAGCCATTCCCAGTGGAGGTATGGATT...TTCTCCTTTGATTTGCTGCCCGAGGTGCAGGCTGTTCGGGTGACTATTCCTGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203281.3 |
||
| CDS-3UTR TCA 90 bp | AATGGAAAAATCGTCCCTCCTTCTCAGAAAGGGCTGAGGACCTATCAGGAAAGCTCCTCCACACTTTTGTaGCCCTGCTTCAGGGAGATG | + |
|
Preference number: 4 (lower is better) Translates to: NGKIVPPSQKGLRTYQESSSTLL*PCFREM Trigger: CATCTCCCTGAAGCAGGGTCACAAAAGTGTGGAGGA...GCTTTCCTGATAGGTCCTCAGCCCTTTCTGAGAAGGAGGGACGATTTTTCCATT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000058548.14 ENSMUST00000203661.3 ENSMUST00000204774.3 |
||
| CDS-3UTR TCA 90 bp | AGGGCTGAGGACCTATCAGGAAAGCCCAAGTTCCTCTCAGGAACTCTAAGAGGGACAGGGACTATTGGTTaGGCCTTGGTAGTCATCTTT | + |
|
Preference number: 4 (lower is better) Translates to: RAEDLSGKPKFLSGTLRGTGTIG*ALVVIF Trigger: AAAGATGACTACCAAGGCTCAACCAATAGTCCCTGT...CCCTCTTAGAGTTCCTGAGAGGAACTTGGGCTTTCCTGATAGGTCCTCAGCCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058548.14 ENSMUST00000203661.3 ENSMUST00000204774.3 |
||
| CDS-3UTR GCA 90 bp | AAAAGAAATGGAAAAATCGTCCCTCCTTCTCAGAAAGGGCTGAGGACCTATCAGGTCACCCGAACAGCCTaGACCTCGGGCAGCAAATCA | + |
|
Preference number: 4 (lower is better) Translates to: KRNGKIVPPSQKGLRTYQVTRTA*TSGSKS Trigger: TGATTTGCTGCCCGAGGTGCAGGCTGTTCGGGTGAC...CTGATAGGTCCTCAGCCCTTTCTGAGAAGGAGGGACGATTTTTCCATTTCTTTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000058548.14 ENSMUST00000203661.3 ENSMUST00000204774.3 |
||
| CDS-3UTR GCA 90 bp | TTACGGTTTGGGGGACAAGAAGCACCCCCAAAGAGTACATGTGTGAGGCCTCATAGGCCTCTATGCACATaGAGGGCAGAAGGAATTCAT | + |
|
Preference number: 4 (lower is better) Translates to: LRFGGQEAPPKSTCVRPHRPLCT*RAEGIH Trigger: ATGAATTCCTTCTGCCCTGCATGTGCATAGAGGCCT...ATGAGGCCTCACACATGTACTCTTTGGGGGTGCTTCTTGTCCCCCAAACCGTAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000058548.14 ENSMUST00000203661.3 ENSMUST00000204774.3 |
||
| CDS-3UTR GCA 90 bp | GGAAAGCCCAAGTTCCTCTCAGGAACTCTAAGAGGGAGCAAATGTGAGGGAGGTTCAGGACACAAGACGTaGTTCCAGGCAAAATGGACA | + |
|
Preference number: 4 (lower is better) Translates to: GKPKFLSGTLRGSKCEGGSGHKT*FQAKWT Trigger: TGTCCATTTTGCCTGGAAGCACGTCTTGTGTCCTGA...ACCTCCCTCACATTTGCTCCCTCTTAGAGTTCCTGAGAGGAACTTGGGCTTTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000058548.14 ENSMUST00000203661.3 ENSMUST00000204774.3 |
||
| CDS-3UTR GCA 90 bp | CCCAAGTTCCTCTCAGGAACTCTAAGAGGGAGCAAATGTGAGGGAGGTTGGTCATCAGGACACAAGACGTaGTTCCAGGCAAAATGGACA | + |
|
Preference number: 4 (lower is better) Translates to: PKFLSGTLRGSKCEGGWSSGHKT*FQAKWT Trigger: TGTCCATTTTGCCTGGAAGCACGTCTTGTGTCCTGA...TGACCAACCTCCCTCACATTTGCTCCCTCTTAGAGTTCCTGAGAGGAACTTGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000058548.14 ENSMUST00000203661.3 ENSMUST00000204774.3 |
||
| CDS-3UTR CCA 90 bp | GAGGGAGGTTGGTCAAGTGTGGGACTTAAGGTGAGTCTTACGGTTTGGGGGACATGGGGACATTCAACGTaGCTGCTGTTTTCAAATGAG | + |
|
Preference number: 4 (lower is better) Translates to: EGGWSSVGLKVSLTVWGTWGHST*LLFSNE Trigger: CTCATTTGAAAACAGCAGCCACGTTGAATGTCCCCA...TGTCCCCCAAACCGTAAGACTCACCTTAAGTCCCACACTTGACCAACCTCCCTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000058548.14 ENSMUST00000203661.3 ENSMUST00000204774.3 |
||
| CDS-3UTR CCA 90 bp | GTCCCTCCTTCTCAGAAAGGGCTGAGGACCTATCAGGAAAGCCCAAGTTCCTCTTGGGGACATTCAACGTaGCTGCTGTTTTCAAATGAG | + |
|
Preference number: 4 (lower is better) Translates to: VPPSQKGLRTYQESPSSSWGHST*LLFSNE Trigger: CTCATTTGAAAACAGCAGCCACGTTGAATGTCCCCA...AGAGGAACTTGGGCTTTCCTGATAGGTCCTCAGCCCTTTCTGAGAAGGAGGGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000058548.14 ENSMUST00000203661.3 ENSMUST00000204774.3 |
||
| CDS-3UTR CCA 90 bp | AAAATCGTCCCTCCTTCTCAGAAAGGGCTGAGGACCTATCAGGAAAGCCCAAGTTGCTTCCAGGCAAAATaGACATCTGACCTCCACACC | + |
|
Preference number: 4 (lower is better) Translates to: KIVPPSQKGLRTYQESPSCFQAK*TSDLHT Trigger: GGTGTGGAGGTCAGATGTCCATTTTGCCTGGAAGCA...ACTTGGGCTTTCCTGATAGGTCCTCAGCCCTTTCTGAGAAGGAGGGACGATTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000058548.14 ENSMUST00000203661.3 ENSMUST00000204774.3 |
||
| CDS-3UTR CCA 90 bp | CCTTCTCAGAAAGGGCTGAGGACCTATCAGGAAAGCCCAAGTTCCTCTCAGGAACTTGGTAGTCATCTTTaGCAGCCTCAAGTTCCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: PSQKGLRTYQESPSSSQELGSHL*QPQVPA Trigger: TGCTGGAACTTGAGGCTGCCAAAGATGACTACCAAG...TTCCTGAGAGGAACTTGGGCTTTCCTGATAGGTCCTCAGCCCTTTCTGAGAAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058548.14 ENSMUST00000203661.3 ENSMUST00000204774.3 |
||
| CDS-3UTR CCA 90 bp | GGGAGCAAATGTGAGGGAGGTTGGTCAAGTGTGGGACTTAAGGTGAGTCTTACGCTTGGTAGTCATCTTTaGCAGCCTCAAGTTCCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: GSKCEGGWSSVGLKVSLTLGSHL*QPQVPA Trigger: TGCTGGAACTTGAGGCTGCCAAAGATGACTACCAAG...CGTAAGACTCACCTTAAGTCCCACACTTGACCAACCTCCCTCACATTTGCTCCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058548.14 ENSMUST00000203661.3 ENSMUST00000204774.3 |
||
| CDS-3UTR TCA 90 bp | AGAAATGGAAAAATCGTCCCTCCTTCTCAGAAAGGGCTGAGGACCTATCAGGAAGCTGGCTGTAGTCAGTaGAGCGTATTGACTGCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: RNGKIVPPSQKGLRTYQEAGCSQ*SVLTAR Trigger: TCTGGCAGTCAATACGCTTCACTGACTACAGCCAGC...TTCCTGATAGGTCCTCAGCCCTTTCTGAGAAGGAGGGACGATTTTTCCATTTCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000058548.14 ENSMUST00000203661.3 ENSMUST00000204774.3 |
||
| CDS-3UTR TCA 90 bp | AGCAAATGTGAGGGAGGTTGGTCAAGTGTGGGACTTAAGGTGAGTCTTACGGTTGATATACCATCCTTCTaGCTCCTGTGCTGTGGCGTT | + |
|
Preference number: 4 (lower is better) Translates to: SKCEGGWSSVGLKVSLTVDIPSF*LLCCGV Trigger: AACGCCACAGCACAGGAGTCAGAAGGATGGTATATC...AACCGTAAGACTCACCTTAAGTCCCACACTTGACCAACCTCCCTCACATTTGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058548.14 ENSMUST00000203661.3 ENSMUST00000204774.3 |
||
| CDS-3UTR TCA 90 bp | TGTGAGGGAGGTTGGTCAAGTGTGGGACTTAAGGTGAGTCTTACGGTTTGGGGGGCTGCTGTTTTCAAATaGGAACTTAAAGCAGAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: CEGGWSSVGLKVSLTVWGAAVFK*ELKAEL Trigger: CAGCTCTGCTTTAAGTTCTCATTTGAAAACAGCAGC...CCCCCAAACCGTAAGACTCACCTTAAGTCCCACACTTGACCAACCTCCCTCACA 49% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000058548.14 ENSMUST00000203661.3 ENSMUST00000204774.3 |
||
| CDS-3UTR TCA 90 bp | GAGGGAGGTTGGTCAAGTGTGGGACTTAAGGTGAGTCTTACGGTTTGGGGGACAGCTGCTGTTTTCAAATaGGAACTTAAAGCAGAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: EGGWSSVGLKVSLTVWGTAAVFK*ELKAEL Trigger: CAGCTCTGCTTTAAGTTCTCATTTGAAAACAGCAGC...TGTCCCCCAAACCGTAAGACTCACCTTAAGTCCCACACTTGACCAACCTCCCTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000058548.14 ENSMUST00000203661.3 ENSMUST00000204774.3 |
||
| CDS-3UTR TCA 90 bp | GGAAAAATCGTCCCTCCTTCTCAGAAAGGGCTGAGGACCTATCAGGAAAGCCCAACAGGGACTATTGGTTaGGCCTTGGTAGTCATCTTT | + |
|
Preference number: 4 (lower is better) Translates to: GKIVPPSQKGLRTYQESPTGTIG*ALVVIF Trigger: AAAGATGACTACCAAGGCTCAACCAATAGTCCCTGT...TGGGCTTTCCTGATAGGTCCTCAGCCCTTTCTGAGAAGGAGGGACGATTTTTCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000058548.14 ENSMUST00000203661.3 ENSMUST00000204774.3 |
||
| CDS-3UTR TCA 90 bp | TTACGGTTTGGGGGACAAGAAGCACCCCCAAAGAGTACATGTGTGAGGCCTCATACAGGGACTATTGGTTaGGCCTTGGTAGTCATCTTT | + |
|
Preference number: 4 (lower is better) Translates to: LRFGGQEAPPKSTCVRPHTGTIG*ALVVIF Trigger: AAAGATGACTACCAAGGCTCAACCAATAGTCCCTGT...ATGAGGCCTCACACATGTACTCTTTGGGGGTGCTTCTTGTCCCCCAAACCGTAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000058548.14 ENSMUST00000203661.3 ENSMUST00000204774.3 |
||
| CDS-3UTR GCA 90 bp | GAGGACCTATCAGGAAAGCCCAAGTTCCTCTCAGGAACTCTAAGAGGGAGCAAATCAGGACACAAGACGTaGTTCCAGGCAAAATGGACA | + |
|
Preference number: 4 (lower is better) Translates to: EDLSGKPKFLSGTLRGSKSGHKT*FQAKWT Trigger: TGTCCATTTTGCCTGGAAGCACGTCTTGTGTCCTGA...TTTGCTCCCTCTTAGAGTTCCTGAGAGGAACTTGGGCTTTCCTGATAGGTCCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000058548.14 ENSMUST00000203661.3 ENSMUST00000204774.3 |
||
| CDS-3UTR CCA 90 bp | ACTCTAAGAGGGAGCAAATGTGAGGGAGGTTGGTCAAGTGTGGGACTTAAGGTGGGGATGGAAATTCGATaGCTTTCCTCAGACAGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: TLRGSKCEGGWSSVGLKVGMEIR*LSSDRE Trigger: TTCCCTGTCTGAGGAAAGCCATCGAATTTCCATCCC...CACCTTAAGTCCCACACTTGACCAACCTCCCTCACATTTGCTCCCTCTTAGAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000058548.14 ENSMUST00000203661.3 ENSMUST00000204774.3 |
||
| CDS-3UTR CCA 90 bp | TGTGAGGGAGGTTGGTCAAGTGTGGGACTTAAGGTGAGTCTTACGGTTTGGGGGCCAGACACAATTTTCTaGGTATCAAAAGGGCTACTC | + |
|
Preference number: 4 (lower is better) Translates to: CEGGWSSVGLKVSLTVWGPDTIF*VSKGLL Trigger: GAGTAGCCCTTTTGATACCCAGAAAATTGTGTCTGG...CCCCCAAACCGTAAGACTCACCTTAAGTCCCACACTTGACCAACCTCCCTCACA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000058548.14 ENSMUST00000203661.3 ENSMUST00000204774.3 |
||
| CDS-3UTR CCA 90 bp | AGCAAATGTGAGGGAGGTTGGTCAAGTGTGGGACTTAAGGTGAGTCTTACGGTTTGCTTCCAGGCAAAATaGACATCTGACCTCCACACC | + |
|
Preference number: 4 (lower is better) Translates to: SKCEGGWSSVGLKVSLTVCFQAK*TSDLHT Trigger: GGTGTGGAGGTCAGATGTCCATTTTGCCTGGAAGCA...AACCGTAAGACTCACCTTAAGTCCCACACTTGACCAACCTCCCTCACATTTGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000058548.14 ENSMUST00000203661.3 ENSMUST00000204774.3 |
||
| CDS-3UTR GCA 90 bp | AATGGAAAAATCGTCCCTCCTTCTCAGAAAGGGCTGAGGACCTATCAGGAAAGCGTCTTCACATTCCAGTaGCCACTGATAACAAAGGCG | + |
|
Preference number: 4 (lower is better) Translates to: NGKIVPPSQKGLRTYQESVFTFQ*PLITKA Trigger: CGCCTTTGTTATCAGTGGGCACTGGAATGTGAAGAC...GCTTTCCTGATAGGTCCTCAGCCCTTTCTGAGAAGGAGGGACGATTTTTCCATT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000058548.14 ENSMUST00000203661.3 ENSMUST00000204774.3 |
||
| CDS-3UTR GCA 90 bp | GTCCCTCCTTCTCAGAAAGGGCTGAGGACCTATCAGGAAAGCCCAAGTTCCTCTGACATTCAACGTGGCTaGTGTTTTCAAATGAGAACT | + |
|
Preference number: 4 (lower is better) Translates to: VPPSQKGLRTYQESPSSSDIQRG*CFQMRT Trigger: AGTTCTCATTTGAAAACAGCAGCCACGTTGAATGTC...AGAGGAACTTGGGCTTTCCTGATAGGTCCTCAGCCCTTTCTGAGAAGGAGGGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000058548.14 ENSMUST00000203661.3 ENSMUST00000204774.3 |
||
| CDS-3UTR TCA 90 bp | ACTCTAAGAGGGAGCAAATGTGAGGGAGGTTGGTCAAGTGTGGGACTTAAGGTGGCTGCTGTTTTCAAATaGGAACTTAAAGCAGAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: TLRGSKCEGGWSSVGLKVAAVFK*ELKAEL Trigger: CAGCTCTGCTTTAAGTTCTCATTTGAAAACAGCAGC...CACCTTAAGTCCCACACTTGACCAACCTCCCTCACATTTGCTCCCTCTTAGAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000058548.14 ENSMUST00000203661.3 ENSMUST00000204774.3 |
||
| CDS-3UTR CCA 90 bp | AATGGAAAAATCGTCCCTCCTTCTCAGAAAGGGCTGAGGACCTATCAGGAAAGCCCAGACACAATTTTCTaGGTATCAAAAGGGCTACTC | + |
|
Preference number: 4 (lower is better) Translates to: NGKIVPPSQKGLRTYQESPDTIF*VSKGLL Trigger: GAGTAGCCCTTTTGATACCCAGAAAATTGTGTCTGG...GCTTTCCTGATAGGTCCTCAGCCCTTTCTGAGAAGGAGGGACGATTTTTCCATT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000058548.14 ENSMUST00000203661.3 ENSMUST00000204774.3 |
||
| CDS-3UTR GCA 90 bp | AGCAAATGTGAGGGAGGTTGGTCAAGTGTGGGACTTAAGGTGAGTCTTACGGTTGACATTCAACGTGGCTaGTGTTTTCAAATGAGAACT | + |
|
Preference number: 4 (lower is better) Translates to: SKCEGGWSSVGLKVSLTVDIQRG*CFQMRT Trigger: AGTTCTCATTTGAAAACAGCAGCCACGTTGAATGTC...AACCGTAAGACTCACCTTAAGTCCCACACTTGACCAACCTCCCTCACATTTGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000058548.14 ENSMUST00000203661.3 ENSMUST00000204774.3 |
||
| CDS TCA 90 bp | TCCGCAGGCAGGGGCAGGCAACCCGAGCAGACACAGCGAGGCCGATaGGCAGTAGCGGGAGAGACAGGAGCAAGGCTGCCAGTCTGGGGC | + |
|
Preference number: 5 (lower is better) Translates to: SAGRGRQPEQTQRGR*AVAGETGARLPVWG Trigger: GCCCCAGACTGGCAGCCTTGCTCCTGTCTCTCCCGCTACTGCTCATCGGCCTCGCTGTGTCTGCTCGGGTTGCCTGCCCCTGCCTGCGGA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000058548.14 ENSMUST00000203281.3 ENSMUST00000203661.3 ENSMUST00000204774.3 |
||
| CDS-3UTR CAA 90 bp | GCACCCCCAAAGAGTACATGTGTGAGGCCTCATTCTGGAGTTCCTGCTGTTGCTAGGCGCACACTGGCCTaGGGGCCTGCAGGAATAGTC | + |
|
Preference number: 5 (lower is better) Translates to: APPKSTCVRPHSGVPAVARRTLA*GPAGIV Trigger: GACTATTCCTGCAGGCCCCAAGGCCAGTGTGCGCCT...AGCAACAGCAGGAACTCCAGAATGAGGCCTCACACATGTACTCTTTGGGGGTGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000058548.14 ENSMUST00000203661.3 ENSMUST00000204774.3 |
||
| CDS-3UTR CAA 90 bp | TTACGGTTTGGGGGACAAGAAGCACCCCCAAAGAGTACATGTGTGAGGCCTCATAGGCGCACACTGGCCTaGGGGCCTGCAGGAATAGTC | + |
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Preference number: 5 (lower is better) Translates to: LRFGGQEAPPKSTCVRPHRRTLA*GPAGIV Trigger: GACTATTCCTGCAGGCCCCAAGGCCAGTGTGCGCCT...ATGAGGCCTCACACATGTACTCTTTGGGGGTGCTTCTTGTCCCCCAAACCGTAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000058548.14 ENSMUST00000203661.3 ENSMUST00000204774.3 |
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| CDS CCA 90 bp | GCCTCTGAGTCCGCATCAGGACACAAGACGTGCTTCCAGGCAAAATaGACATCTGACCTCCACACCAGGATGCAATTCTCCTGCCTCAGG | + |
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Preference number: 5 (lower is better) Translates to: ASESASGHKTCFQAK*TSDLHTRMQFSCLR Trigger: CCTGAGGCAGGAGAATTGCATCCTGGTGTGGAGGTCAGATGTCCATTTTGCCTGGAAGCACGTCTTGTGTCCTGATGCGGACTCAGAGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203661.3 |
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| CDS-3UTR CAA 90 bp | CTAAGAGGGAGCAAATGTGAGGGAGGTTGGTCAAGTGTGGGACTTAAGGTGAGTCGGGGGATGTCACCTTaGGCGCAGAGGCGACTGAAG | + |
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Preference number: 5 (lower is better) Translates to: LRGSKCEGGWSSVGLKVSRGMSP*AQRRLK Trigger: CTTCAGTCGCCTCTGCGCCAAAGGTGACATCCCCCG...ACTCACCTTAAGTCCCACACTTGACCAACCTCCCTCACATTTGCTCCCTCTTAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000058548.14 ENSMUST00000203661.3 ENSMUST00000204774.3 |
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| CDS-3UTR CAA 90 bp | AAAATCGTCCCTCCTTCTCAGAAAGGGCTGAGGACCTATCAGGAAAGCCCAAGTCGGGGGATGTCACCTTaGGCGCAGAGGCGACTGAAG | + |
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Preference number: 5 (lower is better) Translates to: KIVPPSQKGLRTYQESPSRGMSP*AQRRLK Trigger: CTTCAGTCGCCTCTGCGCCAAAGGTGACATCCCCCG...ACTTGGGCTTTCCTGATAGGTCCTCAGCCCTTTCTGAGAAGGAGGGACGATTTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000058548.14 ENSMUST00000203661.3 ENSMUST00000204774.3 |
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| CDS TCA 90 bp | GTCCGCATCAGGACACAAGACGTGCTTCCAGGCAAAATGGACATCTaGCCTCCACACCAGGATGCAATTCTCCTGCCTCAGGAAGGGGAT | + |
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Preference number: 5 (lower is better) Translates to: VRIRTQDVLPGKMDI*PPHQDAILLPQEGD Trigger: ATCCCCTTCCTGAGGCAGGAGAATTGCATCCTGGTGTGGAGGTCAGATGTCCATTTTGCCTGGAAGCACGTCTTGTGTCCTGATGCGGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000203661.3 |
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| CDS TCA 90 bp | GGCGTCATCAGGACACAAGACGTGCTTCCAGGCAAAATGGACATCTaGCCTCCACACCAGGATGCAATTCTCCTGCCTCAGGAAGGGGAT | + |
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Preference number: 5 (lower is better) Translates to: GVIRTQDVLPGKMDI*PPHQDAILLPQEGD Trigger: ATCCCCTTCCTGAGGCAGGAGAATTGCATCCTGGTGTGGAGGTCAGATGTCCATTTTGCCTGGAAGCACGTCTTGTGTCCTGATGACGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000204774.3 |
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| CDS-3UTR CAA 90 bp | AAAAGAAATGGAAAAATCGTCCCTCCTTCTCAGAAAGGGCTGAGGACCTATCAGAGGCGCACACTGGCCTaGGGGCCTGCAGGAATAGTC | + |
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Preference number: 5 (lower is better) Translates to: KRNGKIVPPSQKGLRTYQRRTLA*GPAGIV Trigger: GACTATTCCTGCAGGCCCCAAGGCCAGTGTGCGCCT...CTGATAGGTCCTCAGCCCTTTCTGAGAAGGAGGGACGATTTTTCCATTTCTTTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000058548.14 ENSMUST00000203661.3 ENSMUST00000204774.3 |
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| CDS-3UTR CAA 90 bp | AATGGAAAAATCGTCCCTCCTTCTCAGAAAGGGCTGAGGACCTATCAGGAAAGCCACAGGGACTATTGGTaGAGCCTTGGTAGTCATCTT | + |
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Preference number: 5 (lower is better) Translates to: NGKIVPPSQKGLRTYQESHRDYW*SLGSHL Trigger: AAGATGACTACCAAGGCTCAACCAATAGTCCCTGTG...GCTTTCCTGATAGGTCCTCAGCCCTTTCTGAGAAGGAGGGACGATTTTTCCATT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000058548.14 ENSMUST00000203661.3 ENSMUST00000204774.3 |
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| CDS-3UTR CAA 90 bp | AGAAATGGAAAAATCGTCCCTCCTTCTCAGAAAGGGCTGAGGACCTATCAGGAACACAGGGACTATTGGTaGAGCCTTGGTAGTCATCTT | + |
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Preference number: 5 (lower is better) Translates to: RNGKIVPPSQKGLRTYQEHRDYW*SLGSHL Trigger: AAGATGACTACCAAGGCTCAACCAATAGTCCCTGTG...TTCCTGATAGGTCCTCAGCCCTTTCTGAGAAGGAGGGACGATTTTTCCATTTCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000058548.14 ENSMUST00000203661.3 ENSMUST00000204774.3 |
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| CDS GCA 72 bp | CGCTGTGCCTCTGAGTCCGCATCAGGACACAAGACGTaGTTCCAGGCAAAATGGACATCTGACCTCCACACC | + |
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Preference number: 6 (lower is better) Translates to: RCASESASGHKT*FQAKWTSDLHT Trigger: GGTGTGGAGGTCAGATGTCCATTTTGCCTGGAAGCACGTCTTGTGTCCTGATGCGGACTCAGAGGCACAGCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203661.3 |
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| CDS CCA 72 bp | TCCGCATCAGGACACAAGACGTGCTTCCAGGCAAAATaGACATCTGACCTCCACACCAGGATGCAATTCTCC | + |
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Preference number: 6 (lower is better) Translates to: SASGHKTCFQAK*TSDLHTRMQFS Trigger: GGAGAATTGCATCCTGGTGTGGAGGTCAGATGTCCATTTTGCCTGGAAGCACGTCTTGTGTCCTGATGCGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203661.3 |
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| CDS CCA 72 bp | GCGTCATCAGGACACAAGACGTGCTTCCAGGCAAAATaGACATCTGACCTCCACACCAGGATGCAATTCTCC | + |
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Preference number: 6 (lower is better) Translates to: ASSGHKTCFQAK*TSDLHTRMQFS Trigger: GGAGAATTGCATCCTGGTGTGGAGGTCAGATGTCCATTTTGCCTGGAAGCACGTCTTGTGTCCTGATGACGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204774.3 |
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