Pregenerated sensors for IL17RC (Mus musculus)
Ensembl gene IDs: ENSMUSG00000030281Ensembl transcript IDs: ENSMUST00000058300.14, ENSMUST00000204447.3, ENSMUST00000204632.2, ENSMUST00000205208.3
Found 77 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | TGCAGGATACGGCGTCGCTGGTGGTGGAACCAGGCTAGGGCTCCGTaGGCGCTCAGCTCGCGGCGGCTCCACAGGTCCACGGCCACGCGC | + |
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Preference number: 5 (lower is better) Translates to: CRIRRRWWWNQARAP*ALSSRRLHRSTATR Trigger: GCGCGTGGCCGTGGACCTGTGGAGCCGCCGCGAGCTGAGCGCGCACGGAGCCCTAGCCTGGTTCCACCACCAGCGACGCCGTATCCTGCA 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058300.14 ENSMUST00000205208.3 |
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| CDS GCA 90 bp | CCGGTCCGCGGGTCGCCCCGCGGAAGTGGAGCAGCCTCCCTGCAGTaGATCCAGGAAAGCCGGCAGCTGCGAGGGCAGGGAGAAGAGCGG | + |
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Preference number: 5 (lower is better) Translates to: PVRGSPRGSGAASLQ*IQESRQLRGQGEER Trigger: CCGCTCTTCTCCCTGCCCTCGCAGCTGCCGGCTTTCCTGGATGCACTGCAGGGAGGCTGCTCCACTTCCGCGGGGCGACCCGCGGACCGG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058300.14 ENSMUST00000205208.3 |
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| CDS GCA 90 bp | GTCCACGGCCACGCGCAGTGGCATCTGGCTCAACGCGGACGCCAGTaGTCCCACCAGACGCTCGTAGCCCGCTCCGTCGGCGGAGTGGAG | + |
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Preference number: 5 (lower is better) Translates to: VHGHAQWHLAQRGRQ*SHQTLVARSVGGVE Trigger: CTCCACTCCGCCGACGGAGCGGGCTACGAGCGTCTGGTGGGAGCACTGGCGTCCGCGTTGAGCCAGATGCCACTGCGCGTGGCCGTGGAC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058300.14 ENSMUST00000205208.3 |
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| CDS CCA 90 bp | GCTTCCGAGCTAGAAGTACAGCTGTCCAGGGCGGACCGCAGCGCCTaGGTCACTCGTTCCACCCGGTCCGCGGGTCGCCCCGCGGAAGTG | + |
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Preference number: 5 (lower is better) Translates to: ASELEVQLSRADRSA*VTRSTRSAGRPAEV Trigger: CACTTCCGCGGGGCGACCCGCGGACCGGGTGGAACGAGTGACCCAGGCGCTGCGGTCCGCCCTGGACAGCTGTACTTCTAGCTCGGAAGC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058300.14 ENSMUST00000205208.3 |
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| CDS CCA 90 bp | AGGATTACCACGCCACCCTCCTGCAGGATACGGCGTCGCTGGTGGTaGAACCAGGCTAGGGCTCCGTGCGCGCTCAGCTCGCGGCGGCTC | + |
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Preference number: 5 (lower is better) Translates to: RITTPPSCRIRRRWW*NQARAPCALSSRRL Trigger: GAGCCGCCGCGAGCTGAGCGCGCACGGAGCCCTAGCCTGGTTCCACCACCAGCGACGCCGTATCCTGCAGGAGGGTGGCGTGGTAATCCT 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058300.14 ENSMUST00000205208.3 |
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| CDS TCA 90 bp | GCGTCATGCGGCCCGGGCTCCACTGTCTGGAGCTGCAGCCACTGCTaGCACTGCGCCACGGCCGCGGGCGAGAAGAGAAGGATTACCACG | + |
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Preference number: 5 (lower is better) Translates to: ASCGPGSTVWSCSHC*HCATAAGEKRRITT Trigger: CGTGGTAATCCTTCTCTTCTCGCCCGCGGCCGTGGCGCAGTGTCAGCAGTGGCTGCAGCTCCAGACAGTGGAGCCCGGGCCGCATGACGC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058300.14 ENSMUST00000205208.3 |
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| CDS CCA 90 bp | AGAAGGATTACCACGCCACCCTCCTGCAGGATACGGCGTCGCTGGTaGTGGAACCAGGCTAGGGCTCCGTGCGCGCTCAGCTCGCGGCGG | + |
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Preference number: 5 (lower is better) Translates to: RRITTPPSCRIRRRW*WNQARAPCALSSRR Trigger: CCGCCGCGAGCTGAGCGCGCACGGAGCCCTAGCCTGGTTCCACCACCAGCGACGCCGTATCCTGCAGGAGGGTGGCGTGGTAATCCTTCT 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058300.14 ENSMUST00000205208.3 |
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| CDS CCA 90 bp | TCCGTCTGCAGGCGGGTAGGCACTAGCACAGGGCCTGGGGCAGACTaGAGGCTTCCAGGCAGGCAGAGCACGTCACCATCCCAGAGGTGG | + |
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Preference number: 5 (lower is better) Translates to: SVCRRVGTSTGPGAD*RLPGRQSTSPSQRW Trigger: CCACCTCTGGGATGGTGACGTGCTCTGCCTGCCTGGAAGCCTCCAGTCTGCCCCAGGCCCTGTGCTAGTGCCTACCCGCCTGCAGACGGA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058300.14 |
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| CDS CCA 90 bp | AAGAGAAGGATTACCACGCCACCCTCCTGCAGGATACGGCGTCGCTaGTGGTGGAACCAGGCTAGGGCTCCGTGCGCGCTCAGCTCGCGG | + |
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Preference number: 5 (lower is better) Translates to: KRRITTPPSCRIRRR*WWNQARAPCALSSR Trigger: CCGCGAGCTGAGCGCGCACGGAGCCCTAGCCTGGTTCCACCACCAGCGACGCCGTATCCTGCAGGAGGGTGGCGTGGTAATCCTTCTCTT 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058300.14 ENSMUST00000205208.3 |
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| CDS GCA 90 bp | AGGGCGCAATCTGTCTTCTGTGGACACCTCAGCACCAGCTCCGTCTaGAGGCGGGTAGGCACTAGCACAGGGCCTGGGGCAGACTGGAGG | + |
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Preference number: 5 (lower is better) Translates to: RAQSVFCGHLSTSSV*RRVGTSTGPGADWR Trigger: CCTCCAGTCTGCCCCAGGCCCTGTGCTAGTGCCTACCCGCCTGCAGACGGAGCTGGTGCTGAGGTGTCCACAGAAGACAGATTGCGCCCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058300.14 |
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| CDS GCA 90 bp | GCTGGCAGGGACTCTGGTCTGGTGCCTGCCAGCACAGTGTTACCTTaGCCGGCAGACAGCAAGGCGCATCTAGCTGCCATACCCCTGGGG | + |
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Preference number: 5 (lower is better) Translates to: AGRDSGLVPASTVLP*PADSKAHLAAIPLG Trigger: CCCCAGGGGTATGGCAGCTAGATGCGCCTTGCTGTCTGCCGGGCAAGGTAACACTGTGCTGGCAGGCACCAGACCAGAGTCCCTGCCAGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058300.14 ENSMUST00000205208.3 |
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| CDS CCA 90 bp | CTTCTGGGGCACTGGTGGCACAAGTGGCTGGCAGGGACTCTGGTCTaGTGCCTGCCAGCACAGTGTTACCTTGCCCGGCAGACAGCAAGG | + |
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Preference number: 5 (lower is better) Translates to: LLGHWWHKWLAGTLV*CLPAQCYLARQTAR Trigger: CCTTGCTGTCTGCCGGGCAAGGTAACACTGTGCTGGCAGGCACCAGACCAGAGTCCCTGCCAGCCACTTGTGCCACCAGTGCCCCAGAAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058300.14 ENSMUST00000205208.3 |
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| CDS CCA 90 bp | GCGTTCTTCTGGGGCACTGGTGGCACAAGTGGCTGGCAGGGACTCTaGTCTGGTGCCTGCCAGCACAGTGTTACCTTGCCCGGCAGACAG | + |
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Preference number: 5 (lower is better) Translates to: AFFWGTGGTSGWQGL*SGACQHSVTLPGRQ Trigger: CTGTCTGCCGGGCAAGGTAACACTGTGCTGGCAGGCACCAGACCAGAGTCCCTGCCAGCCACTTGTGCCACCAGTGCCCCAGAAGAACGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058300.14 ENSMUST00000205208.3 |
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| CDS CCA 90 bp | AAGGCGCATCTAGCTGCCATACCCCTGGGGACAGTACCCGCAGCCTaGCTATGTGCCAGAGGTTCCTGTGTGCACCGGGATCTTCCCGGA | + |
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Preference number: 5 (lower is better) Translates to: KAHLAAIPLGTVPAA*LCARGSCVHRDLPG Trigger: TCCGGGAAGATCCCGGTGCACACAGGAACCTCTGGCACATAGCCAGGCTGCGGGTACTGTCCCCAGGGGTATGGCAGCTAGATGCGCCTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000058300.14 ENSMUST00000205208.3 |
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| CDS TCA 90 bp | TCCCAGAGGTGGCAGGAGAGGCCTAGAGAGCAGCGTGCAGTGTCCTaGGGCTCCATCAGTCTCTCCAGAGAGACGACCACAGGGTTTCGG | + |
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Preference number: 5 (lower is better) Translates to: SQRWQERPREQRAVS*GSISLSRETTTGFR Trigger: CCGAAACCCTGTGGTCGTCTCTCTGGAGAGACTGATGGAGCCTCAGGACACTGCACGCTGCTCTCTAGGCCTCTCCTGCCACCTCTGGGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058300.14 |
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| CDS TCA 90 bp | CCAAGACTAGCCTCGAAACAGTCAAATACCGCAGAACCCACGGACTaGCCAGGCTGCACCAGGTCAGCGGGCACCTGGACCTCCAGCAGG | + |
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Preference number: 5 (lower is better) Translates to: PRLASKQSNTAEPTD*PGCTRSAGTWTSSR Trigger: CCTGCTGGAGGTCCAGGTGCCCGCTGACCTGGTGCAGCCTGGTCAGTCCGTGGGTTCTGCGGTATTTGACTGTTTCGAGGCTAGTCTTGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058300.14 ENSMUST00000204447.3 ENSMUST00000205208.3 |
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| CDS CCA 90 bp | ATCGGAAGTCTTGCAGCAACTCCTCTCCCAGGCGAGCAGCTCTCGTaGAGGCCATGCTGGGCAGTGGTGTACAGCCACTGGGTTCCAAGG | + |
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Preference number: 5 (lower is better) Translates to: IGSLAATPLPGEQLS*RPCWAVVYSHWVPR Trigger: CCTTGGAACCCAGTGGCTGTACACCACTGCCCAGCATGGCCTCCACGAGAGCTGCTCGCCTGGGAGAGGAGTTGCTGCAAGACTTCCGAT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058300.14 ENSMUST00000205208.3 |
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| CDS GCA 90 bp | TGGAGTTCTGAATCAGACTTTCCAGCTTCTTCAGGCTCTGCCCAGTaGCCATGCACGGCCAAGTGGACCACCACACGGACACAGAGGGCG | + |
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Preference number: 5 (lower is better) Translates to: WSSESDFPASSGSAQ*PCTAKWTTTRTQRA Trigger: CGCCCTCTGTGTCCGTGTGGTGGTCCACTTGGCCGTGCATGGGCACTGGGCAGAGCCTGAAGAAGCTGGAAAGTCTGATTCAGAACTCCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058300.14 ENSMUST00000204447.3 |
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| CDS CCA 90 bp | TTTCCAGCTTCTTCAGGCTCTGCCCAGTGCCCATGCACGGCCAAGTaGACCACCACACGGACACAGAGGGCGCAATCTGTCTTCTGTGGA | + |
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Preference number: 5 (lower is better) Translates to: FPASSGSAQCPCTAK*TTTRTQRAQSVFCG Trigger: TCCACAGAAGACAGATTGCGCCCTCTGTGTCCGTGTGGTGGTCCACTTGGCCGTGCATGGGCACTGGGCAGAGCCTGAAGAAGCTGGAAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058300.14 ENSMUST00000204447.3 |
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| CDS CCA 90 bp | TCATTCACAGTGGCGTTCTTCTGGGGCACTGGTGGCACAAGTGGCTaGCAGGGACTCTGGTCTGGTGCCTGCCAGCACAGTGTTACCTTG | + |
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Preference number: 5 (lower is better) Translates to: SFTVAFFWGTGGTSG*QGLWSGACQHSVTL Trigger: CAAGGTAACACTGTGCTGGCAGGCACCAGACCAGAGTCCCTGCCAGCCACTTGTGCCACCAGTGCCCCAGAAGAACGCCACTGTGAATGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058300.14 ENSMUST00000205208.3 |
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| CDS TCA 90 bp | CACCACCTGGGCCTGGAGAGAGGCGTTCCTAGACTCCTGGAGTTCTaGATCAGACTTTCCAGCTTCTTCAGGCTCTGCCCAGTGCCCATG | + |
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Preference number: 5 (lower is better) Translates to: HHLGLERGVPRLLEF*IRLSSFFRLCPVPM Trigger: CATGGGCACTGGGCAGAGCCTGAAGAAGCTGGAAAGTCTGATTCAGAACTCCAGGAGTCTAGGAACGCCTCTCTCCAGGCCCAGGTGGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058300.14 ENSMUST00000204447.3 |
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| CDS GCA 90 bp | CATCCAGTGTCAGAAGGACATTGTCACCATCCCAGCAGCTCTGGATaGTGTCCCGGACTTCAAGACCCCTGCAGTCAGGCAGCTGCTGTG | + |
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Preference number: 5 (lower is better) Translates to: HPVSEGHCHHPSSSG*CPGLQDPCSQAAAV Trigger: CACAGCAGCTGCCTGACTGCAGGGGTCTTGAAGTCCGGGACAGCATCCAGAGCTGCTGGGATGGTGACAATGTCCTTCTGACACTGGATG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204632.2 |
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| CDS CCA 90 bp | GCCACCAACTGGAAATCTTGTGGCTCATTCACAGTGGCGTTCTTCTaGGGCACTGGTGGCACAAGTGGCTGGCAGGGACTCTGGTCTGGT | + |
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Preference number: 5 (lower is better) Translates to: ATNWKSCGSFTVAFF*GTGGTSGWQGLWSG Trigger: ACCAGACCAGAGTCCCTGCCAGCCACTTGTGCCACCAGTGCCCCAGAAGAACGCCACTGTGAATGAGCCACAAGATTTCCAGTTGGTGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058300.14 ENSMUST00000205208.3 |
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| CDS CCA 90 bp | CTGGACACAGAGGTTGGGGTGGCCTGCCACCAACTGGAAATCTTGTaGCTCATTCACAGTGGCGTTCTTCTGGGGCACTGGTGGCACAAG | + |
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Preference number: 5 (lower is better) Translates to: LDTEVGVACHQLEIL*LIHSGVLLGHWWHK Trigger: CTTGTGCCACCAGTGCCCCAGAAGAACGCCACTGTGAATGAGCCACAAGATTTCCAGTTGGTGGCAGGCCACCCCAACCTCTGTGTCCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000058300.14 ENSMUST00000205208.3 |
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| CDS CCA 90 bp | CAGGTGCTCACCTGGACACAGAGGTTGGGGTGGCCTGCCACCAACTaGAAATCTTGTGGCTCATTCACAGTGGCGTTCTTCTGGGGCACT | + |
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Preference number: 5 (lower is better) Translates to: QVLTWTQRLGWPATN*KSCGSFTVAFFWGT Trigger: AGTGCCCCAGAAGAACGCCACTGTGAATGAGCCACAAGATTTCCAGTTGGTGGCAGGCCACCCCAACCTCTGTGTCCAGGTGAGCACCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000058300.14 ENSMUST00000205208.3 |
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| CDS CCA 90 bp | AGGCCAGCCATACTAGGACCCAGCGCCTGTGGATGTACTTGTCCATaGGGCAGGCCCATAGCGATCCCATGTTGTCATCGTTCCACAGCT | + |
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Preference number: 5 (lower is better) Translates to: RPAILGPSACGCTCP*GRPIAIPCCHRSTA Trigger: AGCTGTGGAACGATGACAACATGGGATCGCTATGGGCCTGCCCCATGGACAAGTACATCCACAGGCGCTGGGTCCTAGTATGGCTGGCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058300.14 ENSMUST00000205208.3 |
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| CDS CCA 90 bp | AAGGAGAGCACCACCTGGGCCTGGAGAGAGGCGTTCCTAGACTCCTaGAGTTCTGAATCAGACTTTCCAGCTTCTTCAGGCTCTGCCCAG | + |
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Preference number: 5 (lower is better) Translates to: KESTTWAWREAFLDS*SSESDFPASSGSAQ Trigger: CTGGGCAGAGCCTGAAGAAGCTGGAAAGTCTGATTCAGAACTCCAGGAGTCTAGGAACGCCTCTCTCCAGGCCCAGGTGGTGCTCTCCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058300.14 ENSMUST00000204447.3 |
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| CDS CCA 90 bp | CTTGCAGCTGAACCTTCTCCCAGGTGCTCACCTGGACACAGAGGTTaGGGTGGCCTGCCACCAACTGGAAATCTTGTGGCTCATTCACAG | + |
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Preference number: 5 (lower is better) Translates to: LAAEPSPRCSPGHRG*GGLPPTGNLVAHSQ Trigger: CTGTGAATGAGCCACAAGATTTCCAGTTGGTGGCAGGCCACCCCAACCTCTGTGTCCAGGTGAGCACCTGGGAGAAGGTTCAGCTGCAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058300.14 ENSMUST00000205208.3 |
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| CDS GCA 90 bp | AACCTTCTCCCAGGTGCTCACCTGGACACAGAGGTTGGGGTGGCCTaGCACCAACTGGAAATCTTGTGGCTCATTCACAGTGGCGTTCTT | + |
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Preference number: 5 (lower is better) Translates to: NLLPGAHLDTEVGVA*HQLEILWLIHSGVL Trigger: AAGAACGCCACTGTGAATGAGCCACAAGATTTCCAGTTGGTGGCAGGCCACCCCAACCTCTGTGTCCAGGTGAGCACCTGGGAGAAGGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058300.14 ENSMUST00000205208.3 |
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| CDS GCA 90 bp | ATGGGGCAGGCCCATAGCGATCCCATGTTGTCATCGTTCCACAGCTaGATACACTGGTGTGATCGGAAGTCTTGCAGCAACTCCTCTCCC | + |
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Preference number: 5 (lower is better) Translates to: MGQAHSDPMLSSFHS*IHWCDRKSCSNSSP Trigger: GGGAGAGGAGTTGCTGCAAGACTTCCGATCACACCAGTGTATGCAGCTGTGGAACGATGACAACATGGGATCGCTATGGGCCTGCCCCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058300.14 ENSMUST00000205208.3 |
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| CDS CCA 90 bp | GCCCATAGCGATCCCATGTTGTCATCGTTCCACAGCTGCATACACTaGTGTGATCGGAAGTCTTGCAGCAACTCCTCTCCCAGGCGAGCA | + |
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Preference number: 5 (lower is better) Translates to: AHSDPMLSSFHSCIH*CDRKSCSNSSPRRA Trigger: TGCTCGCCTGGGAGAGGAGTTGCTGCAAGACTTCCGATCACACCAGTGTATGCAGCTGTGGAACGATGACAACATGGGATCGCTATGGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058300.14 ENSMUST00000205208.3 |
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| CDS GCA 72 bp | CGGCGTCGCTGGTGGTGGAACCAGGCTAGGGCTCCGTaGGCGCTCAGCTCGCGGCGGCTCCACAGGTCCACG | + |
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Preference number: 6 (lower is better) Translates to: RRRWWWNQARAP*ALSSRRLHRST Trigger: CGTGGACCTGTGGAGCCGCCGCGAGCTGAGCGCGCACGGAGCCCTAGCCTGGTTCCACCACCAGCGACGCCG 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058300.14 ENSMUST00000205208.3 |
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| CDS TCA 72 bp | GGCCCGGGCTCCACTGTCTGGAGCTGCAGCCACTGCTaGCACTGCGCCACGGCCGCGGGCGAGAAGAGAAGG | + |
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Preference number: 6 (lower is better) Translates to: GPGSTVWSCSHC*HCATAAGEKRR Trigger: CCTTCTCTTCTCGCCCGCGGCCGTGGCGCAGTGTCAGCAGTGGCTGCAGCTCCAGACAGTGGAGCCCGGGCC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058300.14 ENSMUST00000205208.3 |
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| CDS GCA 72 bp | CACGCGCAGTGGCATCTGGCTCAACGCGGACGCCAGTaGTCCCACCAGACGCTCGTAGCCCGCTCCGTCGGC | + |
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Preference number: 6 (lower is better) Translates to: HAQWHLAQRGRQ*SHQTLVARSVG Trigger: GCCGACGGAGCGGGCTACGAGCGTCTGGTGGGAGCACTGGCGTCCGCGTTGAGCCAGATGCCACTGCGCGTG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058300.14 ENSMUST00000205208.3 |
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| CDS GCA 72 bp | GGGTCGCCCCGCGGAAGTGGAGCAGCCTCCCTGCAGTaGATCCAGGAAAGCCGGCAGCTGCGAGGGCAGGGA | + |
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Preference number: 6 (lower is better) Translates to: GSPRGSGAASLQ*IQESRQLRGQG Trigger: TCCCTGCCCTCGCAGCTGCCGGCTTTCCTGGATGCACTGCAGGGAGGCTGCTCCACTTCCGCGGGGCGACCC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058300.14 ENSMUST00000205208.3 |
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| CDS CCA 72 bp | CGGCTCCACAGGTCCACGGCCACGCGCAGTGGCATCTaGCTCAACGCGGACGCCAGTGCTCCCACCAGACGC | + |
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Preference number: 6 (lower is better) Translates to: RLHRSTATRSGI*LNADASAPTRR Trigger: GCGTCTGGTGGGAGCACTGGCGTCCGCGTTGAGCCAGATGCCACTGCGCGTGGCCGTGGACCTGTGGAGCCG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058300.14 ENSMUST00000205208.3 |
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| CDS CCA 72 bp | CTAGAAGTACAGCTGTCCAGGGCGGACCGCAGCGCCTaGGTCACTCGTTCCACCCGGTCCGCGGGTCGCCCC | + |
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Preference number: 6 (lower is better) Translates to: LEVQLSRADRSA*VTRSTRSAGRP Trigger: GGGGCGACCCGCGGACCGGGTGGAACGAGTGACCCAGGCGCTGCGGTCCGCCCTGGACAGCTGTACTTCTAG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058300.14 ENSMUST00000205208.3 |
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| CDS GCA 72 bp | CAGCCTCCCTGCAGTGCATCCAGGAAAGCCGGCAGCTaGGAGGGCAGGGAGAAGAGCGGGGCGACGCGGAAC | + |
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Preference number: 6 (lower is better) Translates to: QPPCSASRKAGS*EGREKSGATRN Trigger: GTTCCGCGTCGCCCCGCTCTTCTCCCTGCCCTCGCAGCTGCCGGCTTTCCTGGATGCACTGCAGGGAGGCTG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058300.14 ENSMUST00000205208.3 |
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| CDS CCA 72 bp | ACGCCACCCTCCTGCAGGATACGGCGTCGCTGGTGGTaGAACCAGGCTAGGGCTCCGTGCGCGCTCAGCTCG | + |
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Preference number: 6 (lower is better) Translates to: TPPSCRIRRRWW*NQARAPCALSS Trigger: CGAGCTGAGCGCGCACGGAGCCCTAGCCTGGTTCCACCACCAGCGACGCCGTATCCTGCAGGAGGGTGGCGT 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058300.14 ENSMUST00000205208.3 |
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| CDS CCA 72 bp | ACCACGCCACCCTCCTGCAGGATACGGCGTCGCTGGTaGTGGAACCAGGCTAGGGCTCCGTGCGCGCTCAGC | + |
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Preference number: 6 (lower is better) Translates to: TTPPSCRIRRRW*WNQARAPCALS Trigger: GCTGAGCGCGCACGGAGCCCTAGCCTGGTTCCACCACCAGCGACGCCGTATCCTGCAGGAGGGTGGCGTGGT 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058300.14 ENSMUST00000205208.3 |
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| CDS CCA 72 bp | ATTACCACGCCACCCTCCTGCAGGATACGGCGTCGCTaGTGGTGGAACCAGGCTAGGGCTCCGTGCGCGCTC | + |
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Preference number: 6 (lower is better) Translates to: ITTPPSCRIRRR*WWNQARAPCAL Trigger: GAGCGCGCACGGAGCCCTAGCCTGGTTCCACCACCAGCGACGCCGTATCCTGCAGGAGGGTGGCGTGGTAAT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058300.14 ENSMUST00000205208.3 |
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| CDS CAA 90 bp | GGCTGGCAGGGACTCTGGTCTGGTGCCTGCCAGCACAGTGTTACCTaGCCCGGCAGACAGCAAGGCGCATCTAGCTGCCATACCCCTGGG | + |
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Preference number: 6 (lower is better) Translates to: GWQGLWSGACQHSVT*PGRQQGASSCHTPG Trigger: CCCAGGGGTATGGCAGCTAGATGCGCCTTGCTGTCTGCCGGGCAAGGTAACACTGTGCTGGCAGGCACCAGACCAGAGTCCCTGCCAGCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058300.14 ENSMUST00000205208.3 |
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| CDS GCA 72 bp | TCTGTCTTCTGTGGACACCTCAGCACCAGCTCCGTCTaGAGGCGGGTAGGCACTAGCACAGGGCCTGGGGCA | + |
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Preference number: 6 (lower is better) Translates to: SVFCGHLSTSSV*RRVGTSTGPGA Trigger: TGCCCCAGGCCCTGTGCTAGTGCCTACCCGCCTGCAGACGGAGCTGGTGCTGAGGTGTCCACAGAAGACAGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058300.14 |
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| CDS GCA 72 bp | CATACCCCTGGGGACAGTACCCGCAGCCTGGCTATGTaGCAGAGGTTCCTGTGTGCACCGGGATCTTCCCGG | + |
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Preference number: 6 (lower is better) Translates to: HTPGDSTRSLAM*QRFLCAPGSSR Trigger: CCGGGAAGATCCCGGTGCACACAGGAACCTCTGGCACATAGCCAGGCTGCGGGTACTGTCCCCAGGGGTATG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000058300.14 ENSMUST00000205208.3 |
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| CDS GCA 72 bp | ACTCCTCTCCCAGGCGAGCAGCTCTCGTGGAGGCCATaGTGGGCAGTGGTGTACAGCCACTGGGTTCCAAGG | + |
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Preference number: 6 (lower is better) Translates to: TPLPGEQLSWRP*WAVVYSHWVPR Trigger: CCTTGGAACCCAGTGGCTGTACACCACTGCCCAGCATGGCCTCCACGAGAGCTGCTCGCCTGGGAGAGGAGT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058300.14 ENSMUST00000205208.3 |
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| CDS CCA 72 bp | CTTCCAGGCAGGCAGAGCACGTCACCATCCCAGAGGTaGCAGGAGAGGCCTAGAGAGCAGCGTGCAGTGTCC | + |
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Preference number: 6 (lower is better) Translates to: LPGRQSTSPSQR*QERPREQRAVS Trigger: GGACACTGCACGCTGCTCTCTAGGCCTCTCCTGCCACCTCTGGGATGGTGACGTGCTCTGCCTGCCTGGAAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058300.14 |
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| CDS CCA 72 bp | CACTGGTGGCACAAGTGGCTGGCAGGGACTCTGGTCTaGTGCCTGCCAGCACAGTGTTACCTTGCCCGGCAG | + |
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Preference number: 6 (lower is better) Translates to: HWWHKWLAGTLV*CLPAQCYLARQ Trigger: CTGCCGGGCAAGGTAACACTGTGCTGGCAGGCACCAGACCAGAGTCCCTGCCAGCCACTTGTGCCACCAGTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058300.14 ENSMUST00000205208.3 |
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| CDS CCA 72 bp | TGGGGCACTGGTGGCACAAGTGGCTGGCAGGGACTCTaGTCTGGTGCCTGCCAGCACAGTGTTACCTTGCCC | + |
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Preference number: 6 (lower is better) Translates to: WGTGGTSGWQGL*SGACQHSVTLP Trigger: GGGCAAGGTAACACTGTGCTGGCAGGCACCAGACCAGAGTCCCTGCCAGCCACTTGTGCCACCAGTGCCCCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058300.14 ENSMUST00000205208.3 |
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| CDS CCA 72 bp | GTGGCGTTCTTCTGGGGCACTGGTGGCACAAGTGGCTaGCAGGGACTCTGGTCTGGTGCCTGCCAGCACAGT | + |
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Preference number: 6 (lower is better) Translates to: VAFFWGTGGTSG*QGLWSGACQHS Trigger: ACTGTGCTGGCAGGCACCAGACCAGAGTCCCTGCCAGCCACTTGTGCCACCAGTGCCCCAGAAGAACGCCAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058300.14 ENSMUST00000205208.3 |
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| CDS CCA 72 bp | CTTGCAGCAACTCCTCTCCCAGGCGAGCAGCTCTCGTaGAGGCCATGCTGGGCAGTGGTGTACAGCCACTGG | + |
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Preference number: 6 (lower is better) Translates to: LAATPLPGEQLS*RPCWAVVYSHW Trigger: CCAGTGGCTGTACACCACTGCCCAGCATGGCCTCCACGAGAGCTGCTCGCCTGGGAGAGGAGTTGCTGCAAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058300.14 ENSMUST00000205208.3 |
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| CDS CCA 72 bp | AGTGCAGGGTCCCAGGTCCCATTCCTCGCAGCAGCCTaGGGCTTCCGAGCTAGAAGTACAGCTGTCCAGGGC | + |
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Preference number: 6 (lower is better) Translates to: SAGSQVPFLAAA*GFRARSTAVQG Trigger: GCCCTGGACAGCTGTACTTCTAGCTCGGAAGCCCCAGGCTGCTGCGAGGAATGGGACCTGGGACCCTGCACT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058300.14 ENSMUST00000205208.3 |
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| CDS GCA 72 bp | TGGTGGCACAAGTGGCTGGCAGGGACTCTGGTCTGGTaGCTGCCAGCACAGTGTTACCTTGCCCGGCAGACA | + |
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Preference number: 6 (lower is better) Translates to: WWHKWLAGTLVW*LPAQCYLARQT Trigger: TGTCTGCCGGGCAAGGTAACACTGTGCTGGCAGGCACCAGACCAGAGTCCCTGCCAGCCACTTGTGCCACCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058300.14 ENSMUST00000205208.3 |
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| CDS CCA 72 bp | CACCACACGGACACAGAGGGCGCAATCTGTCTTCTGTaGACACCTCAGCACCAGCTCCGTCTGCAGGCGGGT | + |
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Preference number: 6 (lower is better) Translates to: HHTDTEGAICLL*TPQHQLRLQAG Trigger: ACCCGCCTGCAGACGGAGCTGGTGCTGAGGTGTCCACAGAAGACAGATTGCGCCCTCTGTGTCCGTGTGGTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058300.14 ENSMUST00000204447.3 |
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| CDS CCA 72 bp | TCTTCAGGCTCTGCCCAGTGCCCATGCACGGCCAAGTaGACCACCACACGGACACAGAGGGCGCAATCTGTC | + |
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Preference number: 6 (lower is better) Translates to: SSGSAQCPCTAK*TTTRTQRAQSV Trigger: GACAGATTGCGCCCTCTGTGTCCGTGTGGTGGTCCACTTGGCCGTGCATGGGCACTGGGCAGAGCCTGAAGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058300.14 ENSMUST00000204447.3 |
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| CDS CCA 72 bp | CTAGCTGCCATACCCCTGGGGACAGTACCCGCAGCCTaGCTATGTGCCAGAGGTTCCTGTGTGCACCGGGAT | + |
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Preference number: 6 (lower is better) Translates to: LAAIPLGTVPAA*LCARGSCVHRD Trigger: ATCCCGGTGCACACAGGAACCTCTGGCACATAGCCAGGCTGCGGGTACTGTCCCCAGGGGTATGGCAGCTAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000058300.14 ENSMUST00000205208.3 |
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| CDS GCA 72 bp | TACCCGCAGCCTGGCTATGTGCCAGAGGTTCCTGTGTaGACCGGGATCTTCCCGGAAGGGGCAGAATTCGAC | + |
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Preference number: 6 (lower is better) Translates to: YPQPGYVPEVPV*TGIFPEGAEFD Trigger: GTCGAATTCTGCCCCTTCCGGGAAGATCCCGGTGCACACAGGAACCTCTGGCACATAGCCAGGCTGCGGGTA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058300.14 ENSMUST00000205208.3 |
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| CDS CAA 72 bp | CTTGAAGGGCCCCAAGGAGTCAGCCCACAAGCACGCTaGCAGCTGAACCTTCTCCCAGGTGCTCACCTGGAC | + |
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Preference number: 6 (lower is better) Translates to: LEGPQGVSPQAR*QLNLLPGAHLD Trigger: GTCCAGGTGAGCACCTGGGAGAAGGTTCAGCTGCAAGCGTGCTTGTGGGCTGACTCCTTGGGGCCCTTCAAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058300.14 ENSMUST00000205208.3 |
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| CDS CCA 72 bp | TTGTGGCTCATTCACAGTGGCGTTCTTCTGGGGCACTaGTGGCACAAGTGGCTGGCAGGGACTCTGGTCTGG | + |
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Preference number: 6 (lower is better) Translates to: LWLIHSGVLLGH*WHKWLAGTLVW Trigger: CCAGACCAGAGTCCCTGCCAGCCACTTGTGCCACCAGTGCCCCAGAAGAACGCCACTGTGAATGAGCCACAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058300.14 ENSMUST00000205208.3 |
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| CDS CAA 72 bp | GCCAGCCATACTAGGACCCAGCGCCTGTGGATGTACTaGTCCATGGGGCAGGCCCATAGCGATCCCATGTTG | + |
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Preference number: 6 (lower is better) Translates to: ASHTRTQRLWMY*SMGQAHSDPML Trigger: CAACATGGGATCGCTATGGGCCTGCCCCATGGACAAGTACATCCACAGGCGCTGGGTCCTAGTATGGCTGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058300.14 ENSMUST00000205208.3 |
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| CDS CAA 90 bp | CACCTGGACACAGAGGTTGGGGTGGCCTGCCACCAACTGGAAATCTaGTGGCTCATTCACAGTGGCGTTCTTCTGGGGCACTGGTGGCAC | + |
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Preference number: 6 (lower is better) Translates to: HLDTEVGVACHQLEI*WLIHSGVLLGHWWH Trigger: GTGCCACCAGTGCCCCAGAAGAACGCCACTGTGAATGAGCCACAAGATTTCCAGTTGGTGGCAGGCCACCCCAACCTCTGTGTCCAGGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000058300.14 ENSMUST00000205208.3 |
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| CDS GCA 72 bp | CCAGGTGCTCACCTGGACACAGAGGTTGGGGTGGCCTaGCACCAACTGGAAATCTTGTGGCTCATTCACAGT | + |
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Preference number: 6 (lower is better) Translates to: PGAHLDTEVGVA*HQLEILWLIHS Trigger: ACTGTGAATGAGCCACAAGATTTCCAGTTGGTGGCAGGCCACCCCAACCTCTGTGTCCAGGTGAGCACCTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058300.14 ENSMUST00000205208.3 |
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| CDS GCA 72 bp | TTCCACAGCTGCATACACTGGTGTGATCGGAAGTCTTaGAGCAACTCCTCTCCCAGGCGAGCAGCTCTCGTG | + |
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Preference number: 6 (lower is better) Translates to: FHSCIHWCDRKS*SNSSPRRAALV Trigger: CACGAGAGCTGCTCGCCTGGGAGAGGAGTTGCTGCAAGACTTCCGATCACACCAGTGTATGCAGCTGTGGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058300.14 ENSMUST00000205208.3 |
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| CDS GCA 72 bp | TCAGAAGGACATTGTCACCATCCCAGCAGCTCTGGATaGTGTCCCGGACTTCAAGACCCCTGCAGTCAGGCA | + |
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Preference number: 6 (lower is better) Translates to: SEGHCHHPSSSG*CPGLQDPCSQA Trigger: TGCCTGACTGCAGGGGTCTTGAAGTCCGGGACAGCATCCAGAGCTGCTGGGATGGTGACAATGTCCTTCTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204632.2 |
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| CDS CCA 72 bp | TGGAAATCTTGTGGCTCATTCACAGTGGCGTTCTTCTaGGGCACTGGTGGCACAAGTGGCTGGCAGGGACTC | + |
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Preference number: 6 (lower is better) Translates to: WKSCGSFTVAFF*GTGGTSGWQGL Trigger: GAGTCCCTGCCAGCCACTTGTGCCACCAGTGCCCCAGAAGAACGCCACTGTGAATGAGCCACAAGATTTCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058300.14 ENSMUST00000205208.3 |
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| CDS CCA 72 bp | TTCTCCCAGGTGCTCACCTGGACACAGAGGTTGGGGTaGCCTGCCACCAACTGGAAATCTTGTGGCTCATTC | + |
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Preference number: 6 (lower is better) Translates to: FSQVLTWTQRLG*PATNWKSCGSF Trigger: GAATGAGCCACAAGATTTCCAGTTGGTGGCAGGCCACCCCAACCTCTGTGTCCAGGTGAGCACCTGGGAGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058300.14 ENSMUST00000205208.3 |
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| CDS TCA 72 bp | GGCCTGGAGAGAGGCGTTCCTAGACTCCTGGAGTTCTaGATCAGACTTTCCAGCTTCTTCAGGCTCTGCCCA | + |
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Preference number: 6 (lower is better) Translates to: GLERGVPRLLEF*IRLSSFFRLCP Trigger: TGGGCAGAGCCTGAAGAAGCTGGAAAGTCTGATTCAGAACTCCAGGAGTCTAGGAACGCCTCTCTCCAGGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058300.14 ENSMUST00000204447.3 |
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| CDS CCA 72 bp | ACCTGGACACAGAGGTTGGGGTGGCCTGCCACCAACTaGAAATCTTGTGGCTCATTCACAGTGGCGTTCTTC | + |
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Preference number: 6 (lower is better) Translates to: TWTQRLGWPATN*KSCGSFTVAFF Trigger: GAAGAACGCCACTGTGAATGAGCCACAAGATTTCCAGTTGGTGGCAGGCCACCCCAACCTCTGTGTCCAGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058300.14 ENSMUST00000205208.3 |
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| CDS CCA 72 bp | ATACTAGGACCCAGCGCCTGTGGATGTACTTGTCCATaGGGCAGGCCCATAGCGATCCCATGTTGTCATCGT | + |
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Preference number: 6 (lower is better) Translates to: ILGPSACGCTCP*GRPIAIPCCHR Trigger: ACGATGACAACATGGGATCGCTATGGGCCTGCCCCATGGACAAGTACATCCACAGGCGCTGGGTCCTAGTAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058300.14 ENSMUST00000205208.3 |
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| CDS TCA 72 bp | GGCCGGTTTTCATCTCCACTAACAGCATATCATCCTTaGAGGGCCCCAAGGAGTCAGCCCACAAGCACGCTT | + |
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Preference number: 6 (lower is better) Translates to: GRFSSPLTAYHP*RAPRSQPTSTL Trigger: AAGCGTGCTTGTGGGCTGACTCCTTGGGGCCCTTCAAGGATGATATGCTGTTAGTGGAGATGAAAACCGGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000058300.14 ENSMUST00000205208.3 |
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| CDS TCA 72 bp | CATGTTGTCATCGTTCCACAGCTGCATACACTGGTGTaGTCGGAAGTCTTGCAGCAACTCCTCTCCCAGGCG | + |
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Preference number: 6 (lower is better) Translates to: HVVIVPQLHTLV*SEVLQQLLSQA Trigger: CGCCTGGGAGAGGAGTTGCTGCAAGACTTCCGATCACACCAGTGTATGCAGCTGTGGAACGATGACAACATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058300.14 ENSMUST00000205208.3 |
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| CDS CAA 90 bp | CTGTGGATGTACTTGTCCATGGGGCAGGCCCATAGCGATCCCATGTaGTCATCGTTCCACAGCTGCATACACTGGTGTGATCGGAAGTCT | + |
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Preference number: 6 (lower is better) Translates to: LWMYLSMGQAHSDPM*SSFHSCIHWCDRKS Trigger: AGACTTCCGATCACACCAGTGTATGCAGCTGTGGAACGATGACAACATGGGATCGCTATGGGCCTGCCCCATGGACAAGTACATCCACAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058300.14 ENSMUST00000205208.3 |
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| CDS CCA 72 bp | GATCCCATGTTGTCATCGTTCCACAGCTGCATACACTaGTGTGATCGGAAGTCTTGCAGCAACTCCTCTCCC | + |
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Preference number: 6 (lower is better) Translates to: DPMLSSFHSCIH*CDRKSCSNSSP Trigger: GGGAGAGGAGTTGCTGCAAGACTTCCGATCACACCAGTGTATGCAGCTGTGGAACGATGACAACATGGGATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058300.14 ENSMUST00000205208.3 |
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| CDS CAA 72 bp | TACTTGTCCATGGGGCAGGCCCATAGCGATCCCATGTaGTCATCGTTCCACAGCTGCATACACTGGTGTGAT | + |
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Preference number: 6 (lower is better) Translates to: YLSMGQAHSDPM*SSFHSCIHWCD Trigger: ATCACACCAGTGTATGCAGCTGTGGAACGATGACAACATGGGATCGCTATGGGCCTGCCCCATGGACAAGTA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058300.14 ENSMUST00000205208.3 |
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| CDS TCA 72 bp | TCTGAGGTCCAGTCAGGTTTTTGTACCACAAGGATTTaGGAGCATCCGGGACTGGACGCAGGTACAGTAAGA | + |
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Preference number: 6 (lower is better) Translates to: SEVQSGFCTTRI*EHPGLDAGTVR Trigger: TCTTACTGTACCTGCGTCCAGTCCCGGATGCTCTCAAATCCTTGTGGTACAAAAACCTGACTGGACCTCAGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000058300.14 ENSMUST00000205208.3 |
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| CDS CAA 72 bp | CAGCCACTGGGTTCCAAGGCACAGACTGATGTGTTGTaGAGGCCGGTTTTCATCTCCACTAACAGCATATCA | + |
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Preference number: 6 (lower is better) Translates to: QPLGSKAQTDVL*RPVFISTNSIS Trigger: TGATATGCTGTTAGTGGAGATGAAAACCGGCCTCAACAACACATCAGTCTGTGCCTTGGAACCCAGTGGCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058300.14 ENSMUST00000205208.3 |
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| CDS TCA 72 bp | AGCCACTGGGTTCCAAGGCACAGACTGATGTGTTGTTaGGGCCGGTTTTCATCTCCACTAACAGCATATCAT | + |
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Preference number: 6 (lower is better) Translates to: SHWVPRHRLMCC*GRFSSPLTAYH Trigger: ATGATATGCTGTTAGTGGAGATGAAAACCGGCCTCAACAACACATCAGTCTGTGCCTTGGAACCCAGTGGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058300.14 ENSMUST00000205208.3 |
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| CDS TCA 72 bp | CAGGGAACCAGGTCTGTGTGGTTTAAAGTAATGTTCTaGGGTCCAGTCAGGTTTTTGTACCACAAGGATTTG | + |
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Preference number: 6 (lower is better) Translates to: QGTRSVWFKVMF*GPVRFLYHKDL Trigger: CAAATCCTTGTGGTACAAAAACCTGACTGGACCTCAGAACATTACTTTAAACCACACAGACCTGGTTCCCTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000058300.14 ENSMUST00000205208.3 |
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