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Pregenerated sensors for IL17RA (Mus musculus)

Ensembl gene IDs: ENSMUSG00000002897

Ensembl transcript IDs: ENSMUST00000002976.5

Found 303 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp AAGCCCAGAACCAGGTCAGAGGCTCCGACTGAGGGAGGAAGCCGCTaGGCCTGTGGGGAGAGGCAGCAGTGTGATGGAGGAGCCACAGAG +
Preference number: 1 (lower is better)
Translates to: KPRTRSEAPTEGGSR*ACGERQQCDGGATE
Trigger: CTCTGTGGCTCCTCCATCACACTGCTGCCTCTCCCCACAGGCCCAGCGGCTTCCTCCCTCAGTCGGAGCCTCTGACCTGGTTCTGGGCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002976.5
3UTR TCA 90 bp CTTGTCTTACTTCCGGGACTGGGGATGCAACCCAGGGTCTCAGGCTaGGCGAGCCATCTGTCACTGAGCCGCAGACCTTACCTGTTTCAT +
Preference number: 1 (lower is better)
Translates to: LVLLPGLGMQPRVSG*ASHLSLSRRPYLFH
Trigger: ATGAAACAGGTAAGGTCTGCGGCTCAGTGACAGATGGCTCGCTCAGCCTGAGACCCTGGGTTGCATCCCCAGTCCCGGAAGTAAGACAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002976.5
3UTR CCA 90 bp AAAGGCTCTCTCCATGCAGTGACCACCCACCTTCACTGTTCAAAATaGACAGGGCTGGCATGGGGACCTGGTGCCAGCAGAGGCCACAAT +
Preference number: 1 (lower is better)
Translates to: KGSLHAVTTHLHCSK*TGLAWGPGASRGHN
Trigger: ATTGTGGCCTCTGCTGGCACCAGGTCCCCATGCCAGCCCTGTCCATTTTGAACAGTGAAGGTGGGTGGTCACTGCATGGAGAGAGCCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000002976.5
3UTR TCA 90 bp AAGAATCACATGCCGCAGCCCTCCCACGGACTGGCAGCCAGCACTTaGGAGAGCACAGGATTTCACACGCCTCTTCCTGCTTCTCAAGTT +
Preference number: 1 (lower is better)
Translates to: KNHMPQPSHGLAAST*ESTGFHTPLPASQV
Trigger: AACTTGAGAAGCAGGAAGAGGCGTGTGAAATCCTGTGCTCTCTCAAGTGCTGGCTGCCAGTCCGTGGGAGGGCTGCGGCATGTGATTCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002976.5
3UTR GCA 90 bp ACATACTTTCCTCTGACCTTGAGGGCCTCCCGAGTTCTCCTGTTATaGCACGCCCCCATGCCCACTACCCTCACATCTTTCTCAACTCCC +
Preference number: 1 (lower is better)
Translates to: TYFPLTLRASRVLLL*HAPMPTTLTSFSTP
Trigger: GGGAGTTGAGAAAGATGTGAGGGTAGTGGGCATGGGGGCGTGGCATAACAGGAGAACTCGGGAGGCCCTCAAGGTCAGAGGAAAGTATGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000002976.5
3UTR CCA 90 bp CTTCCTCTCCCATCACAGATGTCAGCTCCAATGCAGCTGGAAGCCTaGCTAAGGGACTTGCGTGTGAGCCTTCCGAAGCAGTGCCAAGAA +
Preference number: 1 (lower is better)
Translates to: LPLPSQMSAPMQLEA*LRDLRVSLPKQCQE
Trigger: TTCTTGGCACTGCTTCGGAAGGCTCACACGCAAGTCCCTTAGCCAGGCTTCCAGCTGCATTGGAGCTGACATCTGTGATGGGAGAGGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002976.5
3UTR TCA 90 bp CCTGGAATTGGAGTTAGAGGCGGTTGTGAGCTGCCATGTGGGTGCTaGATACTGAGCCTGGGTCCTCTGAGAAAGCAGCAAGTGCTCTTC +
Preference number: 1 (lower is better)
Translates to: PGIGVRGGCELPCGC*ILSLGPLRKQQVLF
Trigger: GAAGAGCACTTGCTGCTTTCTCAGAGGACCCAGGCTCAGTATTCAGCACCCACATGGCAGCTCACAACCGCCTCTAACTCCAATTCCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002976.5
3UTR GCA 90 bp GCCACTTGGGGATGGGGTGATGTGACAGCCAGGAGCATGCTACCCTaGCAGCTCCTTGTGTTAGCCTCCAGAATAGAATCTTCCGTAACA +
Preference number: 1 (lower is better)
Translates to: ATWGWGDVTARSMLP*QLLVLASRIESSVT
Trigger: TGTTACGGAAGATTCTATTCTGGAGGCTAACACAAGGAGCTGGCAGGGTAGCATGCTCCTGGCTGTCACATCACCCCATCCCCAAGTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000002976.5
3UTR TCA 90 bp GGGGTGCAAGCCCCTTTACCTGTGGAGCCACCTTGTTTCCTGTCTTaGGAGAGGGTCTTACTATTACCAAGGTTGGCGTGGAACTCCTGT +
Preference number: 1 (lower is better)
Translates to: GVQAPLPVEPPCFLS*ERVLLLPRLAWNSC
Trigger: ACAGGAGTTCCACGCCAACCTTGGTAATAGTAAGACCCTCTCTCAAGACAGGAAACAAGGTGGCTCCACAGGTAAAGGGGCTTGCACCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000002976.5
3UTR CCA 90 bp GCCACACCTAGTCTCCCAAACAGGGGTCCTCTCATTCCTAGTTACTaGCATGTGTGCCTACATACTCAGTGTCATGTGTGTGTGCCAGCC +
Preference number: 1 (lower is better)
Translates to: ATPSLPNRGPLIPSY*HVCLHTQCHVCVPA
Trigger: GGCTGGCACACACACATGACACTGAGTATGTAGGCACACATGCCAGTAACTAGGAATGAGAGGACCCCTGTTTGGGAGACTAGGTGTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002976.5
3UTR TCA 90 bp TGTGCATTCTCTAGAACCTACGCCACAAGGCTGCTGTCTGCCCCATaGGGGCGCCCTGGAGCTACTTTAAACAACCTCTCTTACTGTAGT +
Preference number: 1 (lower is better)
Translates to: CAFSRTYATRLLSAP*GRPGATLNNLSYCS
Trigger: ACTACAGTAAGAGAGGTTGTTTAAAGTAGCTCCAGGGCGCCCTCATGGGGCAGACAGCAGCCTTGTGGCGTAGGTTCTAGAGAATGCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000002976.5
3UTR TCA 90 bp TGCCATAGGCTTGACTGGTGTCTAGATCCAAGGGCCCTTGCTGCCTaGATTTCTGAAGAAATAGAGCTGGGAAAGGCTGATGGGTGGGAG +
Preference number: 1 (lower is better)
Translates to: CHRLDWCLDPRALAA*ISEEIELGKADGWE
Trigger: CTCCCACCCATCAGCCTTTCCCAGCTCTATTTCTTCAGAAATTCAGGCAGCAAGGGCCCTTGGATCTAGACACCAGTCAAGCCTATGGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002976.5
3UTR GCA 90 bp GGCCTGTTATACATATTTAGACACATCTTCCAGGTAAGCCAGCAGTaGCTGTTGGCTCTGGTCAGCTGGAGTTCCTCAGAGACACCCGAG +
Preference number: 1 (lower is better)
Translates to: GLLYIFRHIFQVSQQ*LLALVSWSSSETPE
Trigger: CTCGGGTGTCTCTGAGGAACTCCAGCTGACCAGAGCCAACAGGCACTGCTGGCTTACCTGGAAGATGTGTCTAAATATGTATAACAGGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002976.5
3UTR CCA 90 bp AGAGGGACCCGGTTGTGGTTAAAATGTTCCAGCACTTCCTGGGTGTaGAGAAGTCAGCTCCTCTCATGTGAACTTCACCCGTCCCTTACA +
Preference number: 1 (lower is better)
Translates to: RGTRLWLKCSSTSWV*RSQLLSCELHPSLT
Trigger: TGTAAGGGACGGGTGAAGTTCACATGAGAGGAGCTGACTTCTCCACACCCAGGAAGTGCTGGAACATTTTAACCACAACCGGGTCCCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002976.5
3UTR GCA 90 bp AAACAGAGGATGCCAAGTTCCAGTAACAGACAAAGGCTCTCTCCATaGAGTGACCACCCACCTTCACTGTTCAAAATGGACAGGGCTGGC +
Preference number: 1 (lower is better)
Translates to: KQRMPSSSNRQRLSP*SDHPPSLFKMDRAG
Trigger: GCCAGCCCTGTCCATTTTGAACAGTGAAGGTGGGTGGTCACTGCATGGAGAGAGCCTTTGTCTGTTACTGGAACTTGGCATCCTCTGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002976.5
3UTR CCA 90 bp GAGTCCCTACTTTATTTTCAAGTTTTCTTGTCTTACTTCCGGGACTaGGGATGCAACCCAGGGTCTCAGGCTGAGCGAGCCATCTGTCAC +
Preference number: 1 (lower is better)
Translates to: ESLLYFQVFLSYFRD*GCNPGSQAERAICH
Trigger: GTGACAGATGGCTCGCTCAGCCTGAGACCCTGGGTTGCATCCCCAGTCCCGGAAGTAAGACAAGAAAACTTGAAAATAAAGTAGGGACTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000002976.5
3UTR CCA 90 bp CATGGTAGAGAGCAGTTCTGGGCTGATGTGGGGCTGATTTGCTGCTaGGAGAACTTACGTTTAAGTTCGTATCTGAAACTAGGGTGGCAG +
Preference number: 1 (lower is better)
Translates to: HGREQFWADVGLICC*ENLRLSSYLKLGWQ
Trigger: CTGCCACCCTAGTTTCAGATACGAACTTAAACGTAAGTTCTCCCAGCAGCAAATCAGCCCCACATCAGCCCAGAACTGCTCTCTACCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002976.5
3UTR GCA 90 bp AGACATGGTAGAGAGCAGTTCTGGGCTGATGTGGGGCTGATTTGCTaGTGGGAGAACTTACGTTTAAGTTCGTATCTGAAACTAGGGTGG +
Preference number: 1 (lower is better)
Translates to: RHGREQFWADVGLIC*WENLRLSSYLKLGW
Trigger: CCACCCTAGTTTCAGATACGAACTTAAACGTAAGTTCTCCCAGCAGCAAATCAGCCCCACATCAGCCCAGAACTGCTCTCTACCATGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002976.5
3UTR GCA 90 bp AGTCTCCCAAACAGGGGTCCTCTCATTCCTAGTTACTGGCATGTGTaGCTACATACTCAGTGTCATGTGTGTGTGCCAGCCATGAAATCT +
Preference number: 1 (lower is better)
Translates to: SLPNRGPLIPSYWHV*LHTQCHVCVPAMKS
Trigger: AGATTTCATGGCTGGCACACACACATGACACTGAGTATGTAGGCACACATGCCAGTAACTAGGAATGAGAGGACCCCTGTTTGGGAGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002976.5
3UTR TCA 90 bp GGGAATCTAACTGCCCATTGCGTCTCCAGGATACCACCCTCCTCCTaGGTCCCTACTTTATTTTCAAGTTTTCTTGTCTTACTTCCGGGA +
Preference number: 1 (lower is better)
Translates to: GNLTAHCVSRIPPSS*VPTLFSSFLVLLPG
Trigger: TCCCGGAAGTAAGACAAGAAAACTTGAAAATAAAGTAGGGACTCAGGAGGAGGGTGGTATCCTGGAGACGCAATGGGCAGTTAGATTCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000002976.5
3UTR CCA 90 bp CTTAGAGCTTCACTTCACAGGAGCCTTCAGATGTCAGCTGCTCAGTaGGGTCAACATTCCCTGTGTTTAAGCTCAATTGTAGCTGAAAGC +
Preference number: 1 (lower is better)
Translates to: LRASLHRSLQMSAAQ*GQHSLCLSSIVAES
Trigger: GCTTTCAGCTACAATTGAGCTTAAACACAGGGAATGTTGACCCCACTGAGCAGCTGACATCTGAAGGCTCCTGTGAAGTGAAGCTCTAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002976.5
3UTR GCA 90 bp CCTGAACACCTGGCTTCAGGAGATCATCAAGTCTCAGTTCCCAAGTaGTGGGACTTCAGGTATACAACACTATGTCAGATTCAGATGTTC +
Preference number: 1 (lower is better)
Translates to: PEHLASGDHQVSVPK*WDFRYTTLCQIQMF
Trigger: GAACATCTGAATCTGACATAGTGTTGTATACCTGAAGTCCCAGCACTTGGGAACTGAGACTTGATGATCTCCTGAAGCCAGGTGTTCAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002976.5
3UTR GCA 90 bp TTAGGGATCAGTACCAAGATGTCTGCATTGATTTCTCTGAGGTCTTaGTATGTTTTCACACTGGCCCTGAACACCTGGCTTCAGGAGATC +
Preference number: 1 (lower is better)
Translates to: LGISTKMSALISLRS*YVFTLALNTWLQEI
Trigger: GATCTCCTGAAGCCAGGTGTTCAGGGCCAGTGTGAAAACATAGCAAGACCTCAGAGAAATCAATGCAGACATCTTGGTACTGATCCCTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002976.5
3UTR TCA 90 bp TCTGGGGTATACGAGTGTTCTAAAGCTGATTACACTGTTTGTCACTaGACTCTGAATATGCCAAGCCACTCAGCTGCAAAGGGACAGTTG +
Preference number: 1 (lower is better)
Translates to: SGVYECSKADYTVCH*TLNMPSHSAAKGQL
Trigger: CAACTGTCCCTTTGCAGCTGAGTGGCTTGGCATATTCAGAGTTCAGTGACAAACAGTGTAATCAGCTTTAGAACACTCGTATACCCCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002976.5
3UTR GCA 90 bp GTTATCAGGGAAAGGGGTGTGTTTAGGGATCAGTACCAAGATGTCTaGATTGATTTCTCTGAGGTCTTGCTATGTTTTCACACTGGCCCT +
Preference number: 1 (lower is better)
Translates to: VIRERGVFRDQYQDV*IDFSEVLLCFHTGP
Trigger: AGGGCCAGTGTGAAAACATAGCAAGACCTCAGAGAAATCAATGCAGACATCTTGGTACTGATCCCTAAACACACCCCTTTCCCTGATAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000002976.5
3UTR CCA 90 bp GAACACCTGGCTTCAGGAGATCATCAAGTCTCAGTTCCCAAGTGCTaGGACTTCAGGTATACAACACTATGTCAGATTCAGATGTTCACA +
Preference number: 1 (lower is better)
Translates to: EHLASGDHQVSVPKC*DFRYTTLCQIQMFT
Trigger: TGTGAACATCTGAATCTGACATAGTGTTGTATACCTGAAGTCCCAGCACTTGGGAACTGAGACTTGATGATCTCCTGAAGCCAGGTGTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002976.5
3UTR CCA 90 bp AGAATAAATATTCAAGGAATGAGCAACACACTTGGCTATGAGCTCTaGGAACGGGCTGTGGATTCTTGTGCAATGATGACCAGATGCTCA +
Preference number: 1 (lower is better)
Translates to: RINIQGMSNTLGYEL*ERAVDSCAMMTRCS
Trigger: TGAGCATCTGGTCATCATTGCACAAGAATCCACAGCCCGTTCCCAGAGCTCATAGCCAAGTGTGTTGCTCATTCCTTGAATATTTATTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002976.5
3UTR TCA 90 bp TATACGAGTGTTCTAAAGCTGATTACACTGTTTGTCACTGAACTCTaGATATGCCAAGCCACTCAGCTGCAAAGGGACAGTTGTGAACTG +
Preference number: 1 (lower is better)
Translates to: YTSVLKLITLFVTEL*ICQATQLQRDSCEL
Trigger: CAGTTCACAACTGTCCCTTTGCAGCTGAGTGGCTTGGCATATTCAGAGTTCAGTGACAAACAGTGTAATCAGCTTTAGAACACTCGTATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002976.5
3UTR TCA 90 bp CAAGTTTTACATCACCCATTTCTATACCAGCTCTTTCTAAAGAACTaGTCTGAGAAGACTTCTGGGTATATTTGGCATGAAGTTTCCTCC +
Preference number: 1 (lower is better)
Translates to: QVLHHPFLYQLFLKN*SEKTSGYIWHEVSS
Trigger: GGAGGAAACTTCATGCCAAATATACCCAGAAGTCTTCTCAGATCAGTTCTTTAGAAAGAGCTGGTATAGAAATGGGTGATGTAAAACTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002976.5
3UTR TCA 90 bp CATAAAGGAATGGTTTTGATGTTCTTGGTGATCTTGGTGTTTGTCTaGCAGCAGGCACCAGTTTCTAGAATTTCTAACATTCATGATGAG +
Preference number: 1 (lower is better)
Translates to: HKGMVLMFLVILVFV*QQAPVSRISNIHDE
Trigger: CTCATCATGAATGTTAGAAATTCTAGAAACTGGTGCCTGCTGTCAGACAAACACCAAGATCACCAAGAACATCAAAACCATTCCTTTATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002976.5
3UTR-3UTR GCA 90 bp GGCTGGAGCCTACAGTATCGCCTGGTGGCCCTTGGTGAGCAGGTCTCCTCTGGATCTCTCGGGTTCTTCTaGAGCCAGGGCAGCAGCCCT +
Preference number: 2 (lower is better)
Translates to: GWSLQYRLVALGEQVSSGSLGFF*SQGSSP
Trigger: AGGGCTGCTGCCCTGGCTGCAGAAGAACCCGAGAGA...TCCAGAGGAGACCTGCTCACCAAGGGCCACCAGGCGATACTGTAGGCTCCAGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002976.5
3UTR-3UTR TCA 90 bp CTGGGAGCCACTTGGGGATGGGGTGATGTGACAGCCAGGAGCATGCTACCCTGCCTGGCAGCCAGCACTTaGGAGAGCACAGGATTTCAC +
Preference number: 2 (lower is better)
Translates to: LGATWGWGDVTARSMLPCLAAST*ESTGFH
Trigger: GTGAAATCCTGTGCTCTCTCAAGTGCTGGCTGCCAG...GCAGGGTAGCATGCTCCTGGCTGTCACATCACCCCATCCCCAAGTGGCTCCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000002976.5
3UTR-3UTR GCA 90 bp TTGTCTTACTTCCGGGACTGGGGATGCAACCCAGGGTCTCAGGCTGAGCGAGCCAGAAAGCAGACCTGGTaGTACCTGGGGCTGAGGAGG +
Preference number: 2 (lower is better)
Translates to: LSYFRDWGCNPGSQAERARKQTW*YLGLRR
Trigger: CCTCCTCAGCCCCAGGTAGCACCAGGTCTGCTTTCT...GGCTCGCTCAGCCTGAGACCCTGGGTTGCATCCCCAGTCCCGGAAGTAAGACAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000002976.5
3UTR-3UTR CCA 90 bp CTGGGAGCCACTTGGGGATGGGGTGATGTGACAGCCAGGAGCATGCTACCCTGCGAAAGAAAGCAGACCTaGTGCTACCTGGGGCTGAGG +
Preference number: 2 (lower is better)
Translates to: LGATWGWGDVTARSMLPCERKQT*CYLGLR
Trigger: CCTCAGCCCCAGGTAGCACCAGGTCTGCTTTCTTTC...GCAGGGTAGCATGCTCCTGGCTGTCACATCACCCCATCCCCAAGTGGCTCCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000002976.5
3UTR-3UTR TCA 90 bp CAGTGTCATGTGTGTGTGCCAGCCATGAAATCTGTGTTGAGATCAGACTCTCTCGGTGCTACCTGGGGCTaGGGAGGTGGGGGTGCGGGG +
Preference number: 2 (lower is better)
Translates to: QCHVCVPAMKSVLRSDSLGATWG*GGGGAG
Trigger: CCCCGCACCCCCACCTCCTCAGCCCCAGGTAGCACC...GAGAGAGTCTGATCTCAACACAGATTTCATGGCTGGCACACACACATGACACTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000002976.5
3UTR-3UTR GCA 90 bp TTGTCTTACTTCCGGGACTGGGGATGCAACCCAGGGTCTCAGGCTGAGCGAGCCGCCAAGCCACTCAGCTaGAAAGGGACAGTTGTGAAC +
Preference number: 2 (lower is better)
Translates to: LSYFRDWGCNPGSQAERAAKPLS*KGTVVN
Trigger: GTTCACAACTGTCCCTTTGCAGCTGAGTGGCTTGGC...GGCTCGCTCAGCCTGAGACCCTGGGTTGCATCCCCAGTCCCGGAAGTAAGACAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002976.5
3UTR-3UTR CCA 90 bp TTGTCTTACTTCCGGGACTGGGGATGCAACCCAGGGTCTCAGGCTGAGCGAGCCGTGCATGGGTATGCCTaGTGCCTGAAGAGGCCAAAA +
Preference number: 2 (lower is better)
Translates to: LSYFRDWGCNPGSQAERAVHGYA*CLKRPK
Trigger: TTTTGGCCTCTTCAGGCACCAGGCATACCCATGCAC...GGCTCGCTCAGCCTGAGACCCTGGGTTGCATCCCCAGTCCCGGAAGTAAGACAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002976.5
3UTR-3UTR GCA 90 bp CTCTGGTCAGCTGGAGTTCCTCAGAGACACCCGAGAAAACTGGAGGAGATCTCTGGCATGGGGACCTGGTaGCAGCAGAGGCCACAATTG +
Preference number: 2 (lower is better)
Translates to: LWSAGVPQRHPRKLEEISGMGTW*QQRPQL
Trigger: CAATTGTGGCCTCTGCTGGCACCAGGTCCCCATGCC...AGAGATCTCCTCCAGTTTTCTCGGGTGTCTCTGAGGAACTCCAGCTGACCAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000002976.5
3UTR-3UTR CCA 90 bp GGTGATGTGACAGCCAGGAGCATGCTACCCTGCCAGCTCCTTGTGTTAGCCTCCTGTTCCAGCACTTCCTaGGTGTGGAGAAGTCAGCTC +
Preference number: 2 (lower is better)
Translates to: GDVTARSMLPCQLLVLASCSSTS*VWRSQL
Trigger: GAGCTGACTTCTCCACACCCAGGAAGTGCTGGAACA...GGAGGCTAACACAAGGAGCTGGCAGGGTAGCATGCTCCTGGCTGTCACATCACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002976.5
3UTR CAA 90 bp TCACAGATGTCAGCTCCAATGCAGCTGGAAGCCTGGCTAAGGGACTaGCGTGTGAGCCTTCCGAAGCAGTGCCAAGAAACTAGATCTGGA +
Preference number: 2 (lower is better)
Translates to: SQMSAPMQLEAWLRD*RVSLPKQCQETRSG
Trigger: TCCAGATCTAGTTTCTTGGCACTGCTTCGGAAGGCTCACACGCAAGTCCCTTAGCCAGGCTTCCAGCTGCATTGGAGCTGACATCTGTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002976.5
3UTR-3UTR TCA 90 bp GCTCAAGACAGGAGAGTGCACTCAGGAGTTTGCCTAGAGATGCAGGGAAATGCCTTTTCACACTGGCCCTaGACACCTGGCTTCAGGAGA +
Preference number: 2 (lower is better)
Translates to: AQDRRVHSGVCLEMQGNAFSHWP*TPGFRR
Trigger: TCTCCTGAAGCCAGGTGTTCAGGGCCAGTGTGAAAA...GGCATTTCCCTGCATCTCTAGGCAAACTCCTGAGTGCACTCTCCTGTCTTGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002976.5
3UTR-3UTR TCA 90 bp CAGTGTCATGTGTGTGTGCCAGCCATGAAATCTGTGTTGAGATCAGACTCTCTCACAGCAGCTAGAAGCTaGGGGCTGGGAGCCCTACGT +
Preference number: 2 (lower is better)
Translates to: QCHVCVPAMKSVLRSDSLTAARS*GLGALR
Trigger: ACGTAGGGCTCCCAGCCCTCAGCTTCTAGCTGCTGT...GAGAGAGTCTGATCTCAACACAGATTTCATGGCTGGCACACACACATGACACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002976.5
3UTR-3UTR CCA 90 bp GCTCAAGACAGGAGAGTGCACTCAGGAGTTTGCCTAGAGATGCAGGGAAATGCCCTGGCCCTGAACACCTaGCTTCAGGAGATCATCAAG +
Preference number: 2 (lower is better)
Translates to: AQDRRVHSGVCLEMQGNALALNT*LQEIIK
Trigger: CTTGATGATCTCCTGAAGCCAGGTGTTCAGGGCCAG...GGCATTTCCCTGCATCTCTAGGCAAACTCCTGAGTGCACTCTCCTGTCTTGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002976.5
3UTR CAA 90 bp AACCTCTCTTACTGTAGTTATACAGTGACATACTTTCCTCTGACCTaGAGGGCCTCCCGAGTTCTCCTGTTATGCCACGCCCCCATGCCC +
Preference number: 2 (lower is better)
Translates to: NLSYCSYTVTYFPLT*RASRVLLLCHAPMP
Trigger: GGGCATGGGGGCGTGGCATAACAGGAGAACTCGGGAGGCCCTCAAGGTCAGAGGAAAGTATGTCACTGTATAACTACAGTAAGAGAGGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000002976.5
3UTR-3UTR TCA 90 bp CTCAAATGTGGCACCATGCCAGGCCAAAACAGTTTCATTAGGCACGGTTCAGAAGGGCTGATGTGGGGCTaGTTTGCTGCTGGGAGAACT +
Preference number: 2 (lower is better)
Translates to: LKCGTMPGQNSFIRHGSEGLMWG*FAAGRT
Trigger: AGTTCTCCCAGCAGCAAATCAGCCCCACATCAGCCC...TTCTGAACCGTGCCTAATGAAACTGTTTTGGCCTGGCATGGTGCCACATTTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000002976.5
3UTR-3UTR TCA 90 bp TGTCACCTCTTAGAGCTTCACTTCACAGGAGCCTTCAGATGTCAGCTGCTCAGTAGAGCAGTTCTGGGCTaGTGTGGGGCTGATTTGCTG +
Preference number: 2 (lower is better)
Translates to: CHLLELHFTGAFRCQLLSRAVLG*CGADLL
Trigger: CAGCAAATCAGCCCCACATCAGCCCAGAACTGCTCT...ACTGAGCAGCTGACATCTGAAGGCTCCTGTGAAGTGAAGCTCTAAGAGGTGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002976.5
3UTR-3UTR GCA 90 bp TCACTGTACCCCGAGGTAGAGCTCTCCAGGGATCTGGTGGCTGCAGCCCATGAATCACACGCCTCTTCCTaGTTCTCAAGTTTTACATCA +
Preference number: 2 (lower is better)
Translates to: SLYPEVELSRDLVAAAHESHASS*FSSFTS
Trigger: TGATGTAAAACTTGAGAAGCAGGAAGAGGCGTGTGA...TTCATGGGCTGCAGCCACCAGATCCCTGGAGAGCTCTACCTCGGGGTACAGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000002976.5
3UTR-3UTR TCA 90 bp GTCACCTCTAATTGTCCCTTACTCTTTCCTTGTTCATCCCCACCACCACACACACAACAGATCCACTCATaGGAGGAGTCCCCAGCTGCT +
Preference number: 2 (lower is better)
Translates to: VTSNCPLLFPCSSPPPHTQQIHS*EESPAA
Trigger: AGCAGCTGGGGACTCCTCTCATGAGTGGATCTGTTG...TGTGTGTGGTGGTGGGGATGAACAAGGAAAGAGTAAGGGACAATTAGAGGTGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000002976.5
3UTR-3UTR CCA 90 bp TATGTGCACTGTGTGCATGGGTATGCCTGGTGCCTGAAGAGGCCAAAAGAGCACGTTGAGACTCAAATGTaGCACCATGCCAGGCCAAAA +
Preference number: 2 (lower is better)
Translates to: YVHCVHGYAWCLKRPKEHVETQM*HHARPK
Trigger: TTTTGGCCTGGCATGGTGCCACATTTGAGTCTCAAC...GTGCTCTTTTGGCCTCTTCAGGCACCAGGCATACCCATGCACACAGTGCACATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002976.5
3UTR CAA 90 bp CTCATTTCTCAATTAGGCTCAAGACAGGAGAGTGCACTCAGGAGTTaGCCTAGAGATGCAGGGAAATGCCTGTCAGGAGTACAGGTCCCA +
Preference number: 2 (lower is better)
Translates to: LISQLGSRQESALRS*PRDAGKCLSGVQVP
Trigger: TGGGACCTGTACTCCTGACAGGCATTTCCCTGCATCTCTAGGCAAACTCCTGAGTGCACTCTCCTGTCTTGAGCCTAATTGAGAAATGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002976.5
3UTR-3UTR TCA 90 bp TACAGTGACATACTTTCCTCTGACCTTGAGGGCCTCCCGAGTTCTCCTGTTATGTGGGTATATTTGGCATaGAGTTTCCTCCCCCGTAGG +
Preference number: 2 (lower is better)
Translates to: YSDILSSDLEGLPSSPVMWVYLA*SFLPRR
Trigger: CCTACGGGGGAGGAAACTTCATGCCAAATATACCCA...CATAACAGGAGAACTCGGGAGGCCCTCAAGGTCAGAGGAAAGTATGTCACTGTA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000002976.5
3UTR-3UTR TCA 90 bp CCACCTTCACTGTTCAAAATGGACAGGGCTGGCATGGGGACCTGGTGCCAGCAGTCTAAAGAACTGATCTaGGAAGACTTCTGGGTATAT +
Preference number: 2 (lower is better)
Translates to: PPSLFKMDRAGMGTWCQQSKELI*EDFWVY
Trigger: ATATACCCAGAAGTCTTCTCAGATCAGTTCTTTAGA...CTGCTGGCACCAGGTCCCCATGCCAGCCCTGTCCATTTTGAACAGTGAAGGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000002976.5
3UTR-3UTR TCA 90 bp TGTGCACTGTGTGCATGGGTATGCCTGGTGCCTGAAGAGGCCAAAAGAGCACACGACATGTCTAGAAAATaGAAGAAAGCAGACCTGGTG +
Preference number: 2 (lower is better)
Translates to: CALCAWVCLVPEEAKRAHDMSRK*KKADLV
Trigger: CACCAGGTCTGCTTTCTTTCATTTTCTAGACATGTC...GTGTGCTCTTTTGGCCTCTTCAGGCACCAGGCATACCCATGCACACAGTGCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000002976.5
3UTR-3UTR CCA 90 bp CAGTGTCATGTGTGTGTGCCAGCCATGAAATCTGTGTTGAGATCAGACTCTCTCTCTCCAGGGATCTGGTaGCTGCAGCCCATGAAGAAT +
Preference number: 2 (lower is better)
Translates to: QCHVCVPAMKSVLRSDSLSPGIW*LQPMKN
Trigger: ATTCTTCATGGGCTGCAGCCACCAGATCCCTGGAGA...GAGAGAGTCTGATCTCAACACAGATTTCATGGCTGGCACACACACATGACACTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002976.5
3UTR-3UTR TCA 90 bp TATGTGCACTGTGTGCATGGGTATGCCTGGTGCCTGAAGAGGCCAAAAGAGCACCCTTGTTTCCTGTCTTaGGAGAGGGTCTTACTATTA +
Preference number: 2 (lower is better)
Translates to: YVHCVHGYAWCLKRPKEHPCFLS*ERVLLL
Trigger: TAATAGTAAGACCCTCTCTCAAGACAGGAAACAAGG...GTGCTCTTTTGGCCTCTTCAGGCACCAGGCATACCCATGCACACAGTGCACATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002976.5
3UTR-3UTR TCA 90 bp TGTCACCTCTTAGAGCTTCACTTCACAGGAGCCTTCAGATGTCAGCTGCTCAGTTATATTCACTTGGTGTaGGCCAATCCTGCGCAGAGA +
Preference number: 2 (lower is better)
Translates to: CHLLELHFTGAFRCQLLSYIHLV*ANPAQR
Trigger: TCTCTGCGCAGGATTGGCTCACACCAAGTGAATATA...ACTGAGCAGCTGACATCTGAAGGCTCCTGTGAAGTGAAGCTCTAAGAGGTGACA
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002976.5
3UTR-3UTR GCA 90 bp TGTCACCTCTTAGAGCTTCACTTCACAGGAGCCTTCAGATGTCAGCTGCTCAGTGGCTGTGGATTCTTGTaGAATGATGACCAGATGCTC +
Preference number: 2 (lower is better)
Translates to: CHLLELHFTGAFRCQLLSGCGFL*NDDQML
Trigger: GAGCATCTGGTCATCATTGCACAAGAATCCACAGCC...ACTGAGCAGCTGACATCTGAAGGCTCCTGTGAAGTGAAGCTCTAAGAGGTGACA
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002976.5
3UTR-3UTR CCA 90 bp CCCTTACTCTTTCCTTGTTCATCCCCACCACCACACACACACACACACACACACCCTCTAAGGAGGAAGTaGTATGAAGAACATGAGCCA +
Preference number: 2 (lower is better)
Translates to: PLLFPCSSPPPHTHTHTHPLRRK*YEEHEP
Trigger: TGGCTCATGTTCTTCATACCACTTCCTCCTTAGAGG...GTGTGTGTGTGTGTGTGTGTGTGGTGGTGGGGATGAACAAGGAAAGAGTAAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002976.5
3UTR-3UTR CCA 90 bp TATGTGCACTGTGTGCATGGGTATGCCTGGTGCCTGAAGAGGCCAAAAGAGCACCTCATTCCTAGTTACTaGCATGTGTGCCTACATACT +
Preference number: 2 (lower is better)
Translates to: YVHCVHGYAWCLKRPKEHLIPSY*HVCLHT
Trigger: AGTATGTAGGCACACATGCCAGTAACTAGGAATGAG...GTGCTCTTTTGGCCTCTTCAGGCACCAGGCATACCCATGCACACAGTGCACATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002976.5
3UTR-3UTR TCA 90 bp GTCACCTCTAATTGTCCCTTACTCTTTCCTTGTTCATCCCCACCACCACACACAAGGGCCCTTGCTGCCTaGATTTCTGAAGAAATAGAG +
Preference number: 2 (lower is better)
Translates to: VTSNCPLLFPCSSPPPHTRALAA*ISEEIE
Trigger: CTCTATTTCTTCAGAAATTCAGGCAGCAAGGGCCCT...TGTGTGTGGTGGTGGGGATGAACAAGGAAAGAGTAAGGGACAATTAGAGGTGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002976.5
3UTR-3UTR GCA 90 bp GTCACCTCTAATTGTCCCTTACTCTTTCCTTGTTCATCCCCACCACCACACACATCTTTCTCACTTGGCTaGTGCAGGGTTGAATACAGG +
Preference number: 2 (lower is better)
Translates to: VTSNCPLLFPCSSPPPHTSFSLG*CRVEYR
Trigger: CCTGTATTCAACCCTGCAGCAGCCAAGTGAGAAAGA...TGTGTGTGGTGGTGGGGATGAACAAGGAAAGAGTAAGGGACAATTAGAGGTGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002976.5
3UTR-3UTR GCA 90 bp CCCTTACTCTTTCCTTGTTCATCCCCACCACCACACACACACACACACACACACAGTTACTGGCATGTGTaGCTACATACTCAGTGTCAT +
Preference number: 2 (lower is better)
Translates to: PLLFPCSSPPPHTHTHTHSYWHV*LHTQCH
Trigger: ATGACACTGAGTATGTAGGCACACATGCCAGTAACT...GTGTGTGTGTGTGTGTGTGTGTGGTGGTGGGGATGAACAAGGAAAGAGTAAGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002976.5
3UTR-3UTR CCA 90 bp CCCTTACTCTTTCCTTGTTCATCCCCACCACCACACACACACACACACACACACTCCCACAGCATTTCATaGTCCTTTTCTCACCTAAGT +
Preference number: 2 (lower is better)
Translates to: PLLFPCSSPPPHTHTHTHSHSIS*SFSHLS
Trigger: ACTTAGGTGAGAAAAGGACCATGAAATGCTGTGGGA...GTGTGTGTGTGTGTGTGTGTGTGGTGGTGGGGATGAACAAGGAAAGAGTAAGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000002976.5
3UTR CAA 90 bp TCAGGGAAAGGGGTGTGTTTAGGGATCAGTACCAAGATGTCTGCATaGATTTCTCTGAGGTCTTGCTATGTTTTCACACTGGCCCTGAAC +
Preference number: 2 (lower is better)
Translates to: SGKGVCLGISTKMSA*ISLRSCYVFTLALN
Trigger: GTTCAGGGCCAGTGTGAAAACATAGCAAGACCTCAGAGAAATCAATGCAGACATCTTGGTACTGATCCCTAAACACACCCCTTTCCCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000002976.5
3UTR CAA 90 bp TTGAGAGAGGGTCTTACTATTACCAAGGTTGGCGTGGAACTCCTGTaGAGACTCAAATGTGGCACCATGCCAGGCCAAAACAGTTTCATT +
Preference number: 2 (lower is better)
Translates to: LREGLTITKVGVELL*RLKCGTMPGQNSFI
Trigger: AATGAAACTGTTTTGGCCTGGCATGGTGCCACATTTGAGTCTCAACAGGAGTTCCACGCCAACCTTGGTAATAGTAAGACCCTCTCTCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002976.5
3UTR-3UTR TCA 90 bp TACAGTGACATACTTTCCTCTGACCTTGAGGGCCTCCCGAGTTCTCCTGTTATGCTCTTTCTAAAGAACTaGTCTGAGAAGACTTCTGGG +
Preference number: 2 (lower is better)
Translates to: YSDILSSDLEGLPSSPVMLFLKN*SEKTSG
Trigger: CCCAGAAGTCTTCTCAGATCAGTTCTTTAGAAAGAG...CATAACAGGAGAACTCGGGAGGCCCTCAAGGTCAGAGGAAAGTATGTCACTGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002976.5
3UTR-3UTR TCA 90 bp GTCACCTCTAATTGTCCCTTACTCTTTCCTTGTTCATCCCCACCACCACACACATTTGTCACTGAACTCTaGATATGCCAAGCCACTCAG +
Preference number: 2 (lower is better)
Translates to: VTSNCPLLFPCSSPPPHTFVTEL*ICQATQ
Trigger: CTGAGTGGCTTGGCATATTCAGAGTTCAGTGACAAA...TGTGTGTGGTGGTGGGGATGAACAAGGAAAGAGTAAGGGACAATTAGAGGTGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002976.5
3UTR-3UTR GCA 90 bp GTCACCTCTAATTGTCCCTTACTCTTTCCTTGTTCATCCCCACCACCACACACAATTTCTCTGAGGTCTTaGTATGTTTTCACACTGGCC +
Preference number: 2 (lower is better)
Translates to: VTSNCPLLFPCSSPPPHTISLRS*YVFTLA
Trigger: GGCCAGTGTGAAAACATAGCAAGACCTCAGAGAAAT...TGTGTGTGGTGGTGGGGATGAACAAGGAAAGAGTAAGGGACAATTAGAGGTGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000002976.5
3UTR TCA 72 bp AGGCTGGAGCCTACAGTATCGCCTGGTGGCCCTTGGTaGGCAGGTCTCCTCTGGAGGCGCCAGGGTAGGGCA +
Preference number: 3 (lower is better)
Translates to: RLEPTVSPGGPW*AGLLWRRQGRA
Trigger: TGCCCTACCCTGGCGCCTCCAGAGGAGACCTGCTCACCAAGGGCCACCAGGCGATACTGTAGGCTCCAGCCT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002976.5
3UTR GCA 72 bp GCCCAGACGCCACCCGCAGGCTCTCTCGGGTTCTTCTaGAGCCAGGGCAGCAGCCCTCTATTCATCCTGGCT +
Preference number: 3 (lower is better)
Translates to: AQTPPAGSLGFF*SQGSSPLFILA
Trigger: AGCCAGGATGAATAGAGGGCTGCTGCCCTGGCTGCAGAAGAACCCGAGAGAGCCTGCGGGTGGCGTCTGGGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002976.5
3UTR CCA 72 bp ACCAGGTCAGAGGCTCCGACTGAGGGAGGAAGCCGCTaGGCCTGTGGGGAGAGGCAGCAGTGTGATGGAGGA +
Preference number: 3 (lower is better)
Translates to: TRSEAPTEGGSR*ACGERQQCDGG
Trigger: TCCTCCATCACACTGCTGCCTCTCCCCACAGGCCCAGCGGCTTCCTCCCTCAGTCGGAGCCTCTGACCTGGT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002976.5
3UTR TCA 72 bp CTTCCGGGACTGGGGATGCAACCCAGGGTCTCAGGCTaGGCGAGCCATCTGTCACTGAGCCGCAGACCTTAC +
Preference number: 3 (lower is better)
Translates to: LPGLGMQPRVSG*ASHLSLSRRPY
Trigger: GTAAGGTCTGCGGCTCAGTGACAGATGGCTCGCTCAGCCTGAGACCCTGGGTTGCATCCCCAGTCCCGGAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002976.5
3UTR TCA 72 bp AGATGGCCCTGGGAGCCACTTGGGGATGGGGTGATGTaGCAGCCAGGAGCATGCTACCCTGCCAGCTCCTTG +
Preference number: 3 (lower is better)
Translates to: RWPWEPLGDGVM*QPGACYPASSL
Trigger: CAAGGAGCTGGCAGGGTAGCATGCTCCTGGCTGTCACATCACCCCATCCCCAAGTGGCTCCCAGGGCCATCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000002976.5
3UTR TCA 72 bp ATGCCGCAGCCCTCCCACGGACTGGCAGCCAGCACTTaGGAGAGCACAGGATTTCACACGCCTCTTCCTGCT +
Preference number: 3 (lower is better)
Translates to: MPQPSHGLAAST*ESTGFHTPLPA
Trigger: AGCAGGAAGAGGCGTGTGAAATCCTGTGCTCTCTCAAGTGCTGGCTGCCAGTCCGTGGGAGGGCTGCGGCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002976.5
3UTR TCA 72 bp CAAGTAGATGGCCCTGGGAGCCACTTGGGGATGGGGTaGTGTGACAGCCAGGAGCATGCTACCCTGCCAGCT +
Preference number: 3 (lower is better)
Translates to: QVDGPGSHLGMG*CDSQEHATLPA
Trigger: AGCTGGCAGGGTAGCATGCTCCTGGCTGTCACATCACCCCATCCCCAAGTGGCTCCCAGGGCCATCTACTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000002976.5
3UTR CCA 72 bp TCTCTTACACAGGCTGGAGCCTACAGTATCGCCTGGTaGCCCTTGGTGAGCAGGTCTCCTCTGGAGGCGCCA +
Preference number: 3 (lower is better)
Translates to: SLTQAGAYSIAW*PLVSRSPLEAP
Trigger: TGGCGCCTCCAGAGGAGACCTGCTCACCAAGGGCCACCAGGCGATACTGTAGGCTCCAGCCTGTGTAAGAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002976.5
3UTR-3UTR CAA 90 bp GAGGTAGGAACTAATGTGGTGCCCTTTTTAGAGAGAGCAACCTGGAGCCTGGGACAGGCCACTCCCCTCTaGCCCAGACGCCACCCGCAG +
Preference number: 3 (lower is better)
Translates to: EVGTNVVPFLERATWSLGQATPL*PRRHPQ
Trigger: CTGCGGGTGGCGTCTGGGCAAGAGGGGAGTGGCCTG...TCCCAGGCTCCAGGTTGCTCTCTCTAAAAAGGGCACCACATTAGTTCCTACCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000002976.5
3UTR GCA 72 bp AGACCTGTGCATTCTCTAGAACCTACGCCACAAGGCTaGTGTCTGCCCCATGAGGGCGCCCTGGAGCTACTT +
Preference number: 3 (lower is better)
Translates to: RPVHSLEPTPQG*CLPHEGALELL
Trigger: AAGTAGCTCCAGGGCGCCCTCATGGGGCAGACAGCAGCCTTGTGGCGTAGGTTCTAGAGAATGCACAGGTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002976.5
3UTR GCA 72 bp GAGGACAAAATCACACCCTGGGGCACCAGACCAAGGTaGAGAGCCGCTGGCTCATTCCTCAACAGTCACCTG +
Preference number: 3 (lower is better)
Translates to: EDKITPWGTRPR*RAAGSFLNSHL
Trigger: CAGGTGACTGTTGAGGAATGAGCCAGCGGCTCTGCACCTTGGTCTGGTGCCCCAGGGTGTGATTTTGTCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000002976.5
3UTR CCA 72 bp CTCCATGCAGTGACCACCCACCTTCACTGTTCAAAATaGACAGGGCTGGCATGGGGACCTGGTGCCAGCAGA +
Preference number: 3 (lower is better)
Translates to: LHAVTTHLHCSK*TGLAWGPGASR
Trigger: TCTGCTGGCACCAGGTCCCCATGCCAGCCCTGTCCATTTTGAACAGTGAAGGTGGGTGGTCACTGCATGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000002976.5
3UTR CCA 72 bp GAGCCGCTGGCTCATTCCTCAACAGTCACCTGTCGGTaGCTGCAGCTCCTTTTCCTGAAGCACTGGGGGATA +
Preference number: 3 (lower is better)
Translates to: EPLAHSSTVTCR*LQLLFLKHWGI
Trigger: TATCCCCCAGTGCTTCAGGAAAAGGAGCTGCAGCCACCGACAGGTGACTGTTGAGGAATGAGCCAGCGGCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000002976.5
3UTR-3UTR CAA 90 bp GAGCTCTCCAGGGATCTGGTGGCTGCAGCCCATGAAGAATCACATGCCGCAGCCACGGGCTGTGGATTCTaGTGCAATGATGACCAGATG +
Preference number: 3 (lower is better)
Translates to: ELSRDLVAAAHEESHAAATGCGF*CNDDQM
Trigger: CATCTGGTCATCATTGCACAAGAATCCACAGCCCGT...GGCTGCGGCATGTGATTCTTCATGGGCTGCAGCCACCAGATCCCTGGAGAGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002976.5
3UTR GCA 72 bp CTGTTCAAAATGGACAGGGCTGGCATGGGGACCTGGTaGCAGCAGAGGCCACAATTGAGAGAGCTGGAGGAA +
Preference number: 3 (lower is better)
Translates to: LFKMDRAGMGTW*QQRPQLRELEE
Trigger: TTCCTCCAGCTCTCTCAATTGTGGCCTCTGCTGGCACCAGGTCCCCATGCCAGCCCTGTCCATTTTGAACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000002976.5
3UTR CCA 72 bp GCCCTACGTGGAGTCAGACATGGTAGAGAGCAGTTCTaGGCTGATGTGGGGCTGATTTGCTGCTGGGAGAAC +
Preference number: 3 (lower is better)
Translates to: ALRGVRHGREQF*ADVGLICCWEN
Trigger: GTTCTCCCAGCAGCAAATCAGCCCCACATCAGCCCAGAACTGCTCTCTACCATGTCTGACTCCACGTAGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002976.5
3UTR CCA 72 bp AGTGTAGGGACAGGGAGGCTGCCCCGGGGTAAATGGTaGTGGTGCAGTACTGCTGACAAGGAAGAGGACAAA +
Preference number: 3 (lower is better)
Translates to: SVGTGRLPRGKW*WCSTADKEEDK
Trigger: TTTGTCCTCTTCCTTGTCAGCAGTACTGCACCACCACCATTTACCCCGGGGCAGCCTCCCTGTCCCTACACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000002976.5
3UTR-3UTR CAA 90 bp CTGGGAGCCACTTGGGGATGGGGTGATGTGACAGCCAGGAGCATGCTACCCTGCGATTTCTCTGAGGTCTaGCTATGTTTTCACACTGGC +
Preference number: 3 (lower is better)
Translates to: LGATWGWGDVTARSMLPCDFSEV*LCFHTG
Trigger: GCCAGTGTGAAAACATAGCAAGACCTCAGAGAAATC...GCAGGGTAGCATGCTCCTGGCTGTCACATCACCCCATCCCCAAGTGGCTCCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000002976.5
3UTR TCA 72 bp TCTAGAACCTACGCCACAAGGCTGCTGTCTGCCCCATaGGGGCGCCCTGGAGCTACTTTAAACAACCTCTCT +
Preference number: 3 (lower is better)
Translates to: SRTYATRLLSAP*GRPGATLNNLS
Trigger: AGAGAGGTTGTTTAAAGTAGCTCCAGGGCGCCCTCATGGGGCAGACAGCAGCCTTGTGGCGTAGGTTCTAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000002976.5
3UTR TCA 72 bp GGAGTTAGAGGCGGTTGTGAGCTGCCATGTGGGTGCTaGATACTGAGCCTGGGTCCTCTGAGAAAGCAGCAA +
Preference number: 3 (lower is better)
Translates to: GVRGGCELPCGC*ILSLGPLRKQQ
Trigger: TTGCTGCTTTCTCAGAGGACCCAGGCTCAGTATTCAGCACCCACATGGCAGCTCACAACCGCCTCTAACTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002976.5
3UTR GCA 72 bp TGGGTGGGAGGGGCTTTCTCTTTCTCACTTGGCTGCTaGAGGGTTGAATACAGGCCACACAGTGAGACTTGG +
Preference number: 3 (lower is better)
Translates to: WVGGAFSFSLGC*RVEYRPHSETW
Trigger: CCAAGTCTCACTGTGTGGCCTGTATTCAACCCTGCAGCAGCCAAGTGAGAAAGAGAAAGCCCCTCCCACCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002976.5
3UTR-3UTR CAA 90 bp CCACCTTCACTGTTCAAAATGGACAGGGCTGGCATGGGGACCTGGTGCCAGCAGCTTTCTCTTTCTCACTaGGCTGCTGCAGGGTTGAAT +
Preference number: 3 (lower is better)
Translates to: PPSLFKMDRAGMGTWCQQLSLSH*AAAGLN
Trigger: ATTCAACCCTGCAGCAGCCAAGTGAGAAAGAGAAAG...CTGCTGGCACCAGGTCCCCATGCCAGCCCTGTCCATTTTGAACAGTGAAGGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000002976.5
3UTR TCA 72 bp AACCCAGGGTCTCAGGCTGAGCGAGCCATCTGTCACTaGGCCGCAGACCTTACCTGTTTCATTTTCACAGGT +
Preference number: 3 (lower is better)
Translates to: NPGSQAERAICH*AADLTCFIFTG
Trigger: ACCTGTGAAAATGAAACAGGTAAGGTCTGCGGCTCAGTGACAGATGGCTCGCTCAGCCTGAGACCCTGGGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002976.5
3UTR GCA 72 bp GGATGGGGTGATGTGACAGCCAGGAGCATGCTACCCTaGCAGCTCCTTGTGTTAGCCTCCAGAATAGAATCT +
Preference number: 3 (lower is better)
Translates to: GWGDVTARSMLP*QLLVLASRIES
Trigger: AGATTCTATTCTGGAGGCTAACACAAGGAGCTGGCAGGGTAGCATGCTCCTGGCTGTCACATCACCCCATCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002976.5
3UTR CCA 72 bp GTGTTGAGATCAGACTCTCTCCTTCCAGGCAGGCCCTaGGGATTGAACTTAGGACATCAAAGCTGTGGTGGG +
Preference number: 3 (lower is better)
Translates to: VLRSDSLLPGRP*GLNLGHQSCGG
Trigger: CCCACCACAGCTTTGATGTCCTAAGTTCAATCCCCAGGGCCTGCCTGGAAGGAGAGAGTCTGATCTCAACAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002976.5
3UTR CCA 72 bp AGTGCCAGCCTTGCACTGACTGTGCCAAAGAGCTCTTaGGATGTTGCTCTCTTACACAGGCTGGAGCCTACA +
Preference number: 3 (lower is better)
Translates to: SASLALTVPKSS*DVALLHRLEPT
Trigger: TGTAGGCTCCAGCCTGTGTAAGAGAGCAACATCCCAAGAGCTCTTTGGCACAGTCAGTGCAAGGCTGGCACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002976.5
3UTR-3UTR CAA 90 bp GGTGATGTGACAGCCAGGAGCATGCTACCCTGCCAGCTCCTTGTGTTAGCCTCCGCCATGAAATCTGTGTaGAGATCAGACTCTCTCCTT +
Preference number: 3 (lower is better)
Translates to: GDVTARSMLPCQLLVLASAMKSV*RSDSLL
Trigger: AAGGAGAGAGTCTGATCTCAACACAGATTTCATGGC...GGAGGCTAACACAAGGAGCTGGCAGGGTAGCATGCTCCTGGCTGTCACATCACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002976.5
3UTR-3UTR CAA 90 bp CTGGGAGCCACTTGGGGATGGGGTGATGTGACAGCCAGGAGCATGCTACCCTGCTGCGCAGAGATAGCTTaGATAATCTCAGAAAGCAAA +
Preference number: 3 (lower is better)
Translates to: LGATWGWGDVTARSMLPCCAEIA*IISESK
Trigger: TTTGCTTTCTGAGATTATCAAAGCTATCTCTGCGCA...GCAGGGTAGCATGCTCCTGGCTGTCACATCACCCCATCCCCAAGTGGCTCCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000002976.5
3UTR TCA 72 bp GCCCCTTTACCTGTGGAGCCACCTTGTTTCCTGTCTTaGGAGAGGGTCTTACTATTACCAAGGTTGGCGTGG +
Preference number: 3 (lower is better)
Translates to: APLPVEPPCFLS*ERVLLLPRLAW
Trigger: CCACGCCAACCTTGGTAATAGTAAGACCCTCTCTCAAGACAGGAAACAAGGTGGCTCCACAGGTAAAGGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002976.5
3UTR-3UTR CAA 90 bp CCACCTTCACTGTTCAAAATGGACAGGGCTGGCATGGGGACCTGGTGCCAGCAGACCTTGTTTCCTGTCTaGAGAGAGGGTCTTACTATT +
Preference number: 3 (lower is better)
Translates to: PPSLFKMDRAGMGTWCQQTLFPV*REGLTI
Trigger: AATAGTAAGACCCTCTCTCAAGACAGGAAACAAGGT...CTGCTGGCACCAGGTCCCCATGCCAGCCCTGTCCATTTTGAACAGTGAAGGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000002976.5
3UTR GCA 72 bp AACAGGGGTCCTCTCATTCCTAGTTACTGGCATGTGTaGCTACATACTCAGTGTCATGTGTGTGTGCCAGCC +
Preference number: 3 (lower is better)
Translates to: NRGPLIPSYWHV*LHTQCHVCVPA
Trigger: GGCTGGCACACACACATGACACTGAGTATGTAGGCACACATGCCAGTAACTAGGAATGAGAGGACCCCTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002976.5
3UTR CCA 72 bp CTTTATTTTCAAGTTTTCTTGTCTTACTTCCGGGACTaGGGATGCAACCCAGGGTCTCAGGCTGAGCGAGCC +
Preference number: 3 (lower is better)
Translates to: LYFQVFLSYFRD*GCNPGSQAERA
Trigger: GGCTCGCTCAGCCTGAGACCCTGGGTTGCATCCCCAGTCCCGGAAGTAAGACAAGAAAACTTGAAAATAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000002976.5
3UTR TCA 72 bp GCCTTCCGAAGCAGTGCCAAGAAACTAGATCTGGACTaGAACACTCTATCAAGTGACACCCAGGTCACCTCT +
Preference number: 3 (lower is better)
Translates to: AFRSSAKKLDLD*NTLSSDTQVTS
Trigger: AGAGGTGACCTGGGTGTCACTTGATAGAGTGTTTCAGTCCAGATCTAGTTTCTTGGCACTGCTTCGGAAGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002976.5
3UTR GCA 72 bp GAACGGGCTGTGGATTCTTGTGCAATGATGACCAGATaGTCATGTCGGGTTATCAGGGAAAGGGGTGTGTTT +
Preference number: 3 (lower is better)
Translates to: ERAVDSCAMMTR*SCRVIRERGVF
Trigger: AAACACACCCCTTTCCCTGATAACCCGACATGAGCATCTGGTCATCATTGCACAAGAATCCACAGCCCGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002976.5
3UTR GCA 72 bp GGTAGAGAGCAGTTCTGGGCTGATGTGGGGCTGATTTaGTGCTGGGAGAACTTACGTTTAAGTTCGTATCTG +
Preference number: 3 (lower is better)
Translates to: GREQFWADVGLI*CWENLRLSSYL
Trigger: CAGATACGAACTTAAACGTAAGTTCTCCCAGCAGCAAATCAGCCCCACATCAGCCCAGAACTGCTCTCTACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002976.5
3UTR-3UTR CAA 90 bp GAGGTAGGAACTAATGTGGTGCCCTTTTTAGAGAGAGCAACCTGGAGCCTGGGAACCAAGATGTCTGCATaGATTTCTCTGAGGTCTTGC +
Preference number: 3 (lower is better)
Translates to: EVGTNVVPFLERATWSLGTKMSA*ISLRSC
Trigger: GCAAGACCTCAGAGAAATCAATGCAGACATCTTGGT...TCCCAGGCTCCAGGTTGCTCTCTCTAAAAAGGGCACCACATTAGTTCCTACCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000002976.5
3UTR TCA 72 bp CTTGACTGGTGTCTAGATCCAAGGGCCCTTGCTGCCTaGATTTCTGAAGAAATAGAGCTGGGAAAGGCTGAT +
Preference number: 3 (lower is better)
Translates to: LDWCLDPRALAA*ISEEIELGKAD
Trigger: ATCAGCCTTTCCCAGCTCTATTTCTTCAGAAATTCAGGCAGCAAGGGCCCTTGGATCTAGACACCAGTCAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002976.5
3UTR TCA 72 bp GTCTTACTATTACCAAGGTTGGCGTGGAACTCCTGTTaGGACTCAAATGTGGCACCATGCCAGGCCAAAACA +
Preference number: 3 (lower is better)
Translates to: VLLLPRLAWNSC*DSNVAPCQAKT
Trigger: TGTTTTGGCCTGGCATGGTGCCACATTTGAGTCTCAACAGGAGTTCCACGCCAACCTTGGTAATAGTAAGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002976.5
3UTR GCA 72 bp ATGCCAAGTTCCAGTAACAGACAAAGGCTCTCTCCATaGAGTGACCACCCACCTTCACTGTTCAAAATGGAC +
Preference number: 3 (lower is better)
Translates to: MPSSSNRQRLSP*SDHPPSLFKMD
Trigger: GTCCATTTTGAACAGTGAAGGTGGGTGGTCACTGCATGGAGAGAGCCTTTGTCTGTTACTGGAACTTGGCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002976.5
3UTR CCA 72 bp AGTCTCCCAAACAGGGGTCCTCTCATTCCTAGTTACTaGCATGTGTGCCTACATACTCAGTGTCATGTGTGT +
Preference number: 3 (lower is better)
Translates to: SLPNRGPLIPSY*HVCLHTQCHVC
Trigger: ACACACATGACACTGAGTATGTAGGCACACATGCCAGTAACTAGGAATGAGAGGACCCCTGTTTGGGAGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002976.5
3UTR-3UTR CAA 90 bp TGTGCACTGTGTGCATGGGTATGCCTGGTGCCTGAAGAGGCCAAAAGAGCACACCATAAAGGAATGGTTTaGATGTTCTTGGTGATCTTG +
Preference number: 3 (lower is better)
Translates to: CALCAWVCLVPEEAKRAHHKGMV*MFLVIL
Trigger: CAAGATCACCAAGAACATCAAAACCATTCCTTTATG...GTGTGCTCTTTTGGCCTCTTCAGGCACCAGGCATACCCATGCACACAGTGCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002976.5
3UTR CCA 72 bp GAGCAGTTCTGGGCTGATGTGGGGCTGATTTGCTGCTaGGAGAACTTACGTTTAAGTTCGTATCTGAAACTA +
Preference number: 3 (lower is better)
Translates to: EQFWADVGLICC*ENLRLSSYLKL
Trigger: TAGTTTCAGATACGAACTTAAACGTAAGTTCTCCCAGCAGCAAATCAGCCCCACATCAGCCCAGAACTGCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002976.5
3UTR CCA 72 bp TCACTTCACAGGAGCCTTCAGATGTCAGCTGCTCAGTaGGGTCAACATTCCCTGTGTTTAAGCTCAATTGTA +
Preference number: 3 (lower is better)
Translates to: SLHRSLQMSAAQ*GQHSLCLSSIV
Trigger: TACAATTGAGCTTAAACACAGGGAATGTTGACCCCACTGAGCAGCTGACATCTGAAGGCTCCTGTGAAGTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002976.5
3UTR TCA 72 bp ACTGCCCATTGCGTCTCCAGGATACCACCCTCCTCCTaGGTCCCTACTTTATTTTCAAGTTTTCTTGTCTTA +
Preference number: 3 (lower is better)
Translates to: TAHCVSRIPPSS*VPTLFSSFLVL
Trigger: TAAGACAAGAAAACTTGAAAATAAAGTAGGGACTCAGGAGGAGGGTGGTATCCTGGAGACGCAATGGGCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000002976.5
3UTR GCA 72 bp CTGGCTTCAGGAGATCATCAAGTCTCAGTTCCCAAGTaGTGGGACTTCAGGTATACAACACTATGTCAGATT +
Preference number: 3 (lower is better)
Translates to: LASGDHQVSVPK*WDFRYTTLCQI
Trigger: AATCTGACATAGTGTTGTATACCTGAAGTCCCAGCACTTGGGAACTGAGACTTGATGATCTCCTGAAGCCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002976.5
3UTR GCA 72 bp GCACACACATATGCACACACACAATCACTGAATTCGTaGTTCCCACAGCATTTCATGGTCCTTTTCTCACCT +
Preference number: 3 (lower is better)
Translates to: AHTYAHTQSLNS*FPQHFMVLFSP
Trigger: AGGTGAGAAAAGGACCATGAAATGCTGTGGGAAGCACGAATTCAGTGATTGTGTGTGTGCATATGTGTGTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002976.5
3UTR CCA 72 bp GCTTCAGGAGATCATCAAGTCTCAGTTCCCAAGTGCTaGGACTTCAGGTATACAACACTATGTCAGATTCAG +
Preference number: 3 (lower is better)
Translates to: ASGDHQVSVPKC*DFRYTTLCQIQ
Trigger: CTGAATCTGACATAGTGTTGTATACCTGAAGTCCCAGCACTTGGGAACTGAGACTTGATGATCTCCTGAAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002976.5
3UTR TCA 72 bp GTTCTAAAGCTGATTACACTGTTTGTCACTGAACTCTaGATATGCCAAGCCACTCAGCTGCAAAGGGACAGT +
Preference number: 3 (lower is better)
Translates to: VLKLITLFVTEL*ICQATQLQRDS
Trigger: ACTGTCCCTTTGCAGCTGAGTGGCTTGGCATATTCAGAGTTCAGTGACAAACAGTGTAATCAGCTTTAGAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002976.5
3UTR GCA 72 bp TTGTCACTGAACTCTGAATATGCCAAGCCACTCAGCTaGAAAGGGACAGTTGTGAACTGTATGATGTATGGA +
Preference number: 3 (lower is better)
Translates to: LSLNSEYAKPLS*KGTVVNCMMYG
Trigger: TCCATACATCATACAGTTCACAACTGTCCCTTTGCAGCTGAGTGGCTTGGCATATTCAGAGTTCAGTGACAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002976.5
3UTR TCA 72 bp AATAAATATTCAAGGAATGAGCAACACACTTGGCTATaGGCTCTGGGAACGGGCTGTGGATTCTTGTGCAAT +
Preference number: 3 (lower is better)
Translates to: NKYSRNEQHTWL*ALGTGCGFLCN
Trigger: ATTGCACAAGAATCCACAGCCCGTTCCCAGAGCTCATAGCCAAGTGTGTTGCTCATTCCTTGAATATTTATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002976.5
3UTR GCA 72 bp GAAAGGGGTGTGTTTAGGGATCAGTACCAAGATGTCTaGATTGATTTCTCTGAGGTCTTGCTATGTTTTCAC +
Preference number: 3 (lower is better)
Translates to: ERGVFRDQYQDV*IDFSEVLLCFH
Trigger: GTGAAAACATAGCAAGACCTCAGAGAAATCAATGCAGACATCTTGGTACTGATCCCTAAACACACCCCTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000002976.5
3UTR GCA 72 bp CCCACAATGATATATTCACTTGGTGTGAGCCAATCCTaGGCAGAGATAGCTTTGATAATCTCAGAAAGCAAA +
Preference number: 3 (lower is better)
Translates to: PTMIYSLGVSQS*AEIALIISESK
Trigger: TTTGCTTTCTGAGATTATCAAAGCTATCTCTGCGCAGGATTGGCTCACACCAAGTGAATATATCATTGTGGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002976.5
3UTR TCA 72 bp GTGTGTGTAAATAAGATCTTAAACGACTTGTGTGTGTaGGTGGTTTGCCTTCATGTATGTATGTGCACTGTG +
Preference number: 3 (lower is better)
Translates to: VCVNKILNDLCV*VVCLHVCMCTV
Trigger: CACAGTGCACATACATACATGAAGGCAAACCACTCACACACACAAGTCGTTTAAGATCTTATTTACACACAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002976.5
3UTR TCA 72 bp CATCACCCATTTCTATACCAGCTCTTTCTAAAGAACTaGTCTGAGAAGACTTCTGGGTATATTTGGCATGAA +
Preference number: 3 (lower is better)
Translates to: HHPFLYQLFLKN*SEKTSGYIWHE
Trigger: TTCATGCCAAATATACCCAGAAGTCTTCTCAGATCAGTTCTTTAGAAAGAGCTGGTATAGAAATGGGTGATG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002976.5
3UTR TCA 72 bp ATGGTTTTGATGTTCTTGGTGATCTTGGTGTTTGTCTaGCAGCAGGCACCAGTTTCTAGAATTTCTAACATT +
Preference number: 3 (lower is better)
Translates to: MVLMFLVILVFV*QQAPVSRISNI
Trigger: AATGTTAGAAATTCTAGAAACTGGTGCCTGCTGTCAGACAAACACCAAGATCACCAAGAACATCAAAACCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002976.5
CDS-3UTR CCA 90 bp CCACCTTCACTGTTCAAAATGGACAGGGCTGGCATGGGGACCTGGTGCCAGCAGCTCGAGGACCACCTCTaGCCTCGGCCAGCTCTCCAG +
Preference number: 4 (lower is better)
Translates to: PPSLFKMDRAGMGTWCQQLEDHL*PRPALQ
Trigger: CTGGAGAGCTGGCCGAGGCCAGAGGTGGTCCTCGAG...CTGCTGGCACCAGGTCCCCATGCCAGCCCTGTCCATTTTGAACAGTGAAGGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000002976.5
CDS-3UTR GCA 90 bp CTGGGAGCCACTTGGGGATGGGGTGATGTGACAGCCAGGAGCATGCTACCCTGCCAGGACGGACAGCTCTaGACCCTCGAGGTACAGGAT +
Preference number: 4 (lower is better)
Translates to: LGATWGWGDVTARSMLPCQDGQL*TLEVQD
Trigger: ATCCTGTACCTCGAGGGTGCAGAGCTGTCCGTCCTG...GCAGGGTAGCATGCTCCTGGCTGTCACATCACCCCATCCCCAAGTGGCTCCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000002976.5
CDS-3UTR CCA 90 bp GAGCTCTCCAGGGATCTGGTGGCTGCAGCCCATGAAGAATCACATGCCGCAGCCGGTCCCCATCAGGGATaGGCTTCGGCAGGTGGTGAA +
Preference number: 4 (lower is better)
Translates to: ELSRDLVAAAHEESHAAAGPHQG*ASAGGE
Trigger: TTCACCACCTGCCGAAGCCCATCCCTGATGGGGACC...GGCTGCGGCATGTGATTCTTCATGGGCTGCAGCCACCAGATCCCTGGAGAGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002976.5
CDS-3UTR CCA 90 bp CCACCTTCACTGTTCAAAATGGACAGGGCTGGCATGGGGACCTGGTGCCAGCAGCGCTGTCCTCTGTCATaGGCAGCTGGGCAGCTGCTC +
Preference number: 4 (lower is better)
Translates to: PPSLFKMDRAGMGTWCQQRCPLS*AAGQLL
Trigger: GAGCAGCTGCCCAGCTGCCCATGACAGAGGACAGCG...CTGCTGGCACCAGGTCCCCATGCCAGCCCTGTCCATTTTGAACAGTGAAGGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000002976.5
CDS-3UTR TCA 90 bp CCACCTTCACTGTTCAAAATGGACAGGGCTGGCATGGGGACCTGGTGCCAGCAGAGAGGCTCCACCACATaGGCTGCAGGGACCTGCTCT +
Preference number: 4 (lower is better)
Translates to: PPSLFKMDRAGMGTWCQQRGSTT*AAGTCS
Trigger: AGAGCAGGTCCCTGCAGCTCATGTGGTGGAGCCTCT...CTGCTGGCACCAGGTCCCCATGCCAGCCCTGTCCATTTTGAACAGTGAAGGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000002976.5
CDS-3UTR TCA 90 bp TTGTCTTACTTCCGGGACTGGGGATGCAACCCAGGGTCTCAGGCTGAGCGAGCCCTACCACAAAGTGGCTaGAGGAAAACCGCCACCGCT +
Preference number: 4 (lower is better)
Translates to: LSYFRDWGCNPGSQAERALPQSG*RKTATA
Trigger: AGCGGTGGCGGTTTTCCTTCAGCCACTTTGTGGTAG...GGCTCGCTCAGCCTGAGACCCTGGGTTGCATCCCCAGTCCCGGAAGTAAGACAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000002976.5
CDS-3UTR CCA 90 bp CCACCTTCACTGTTCAAAATGGACAGGGCTGGCATGGGGACCTGGTGCCAGCAGCACACAGCCGCTCATTaGTGTTCAGCTGCAGGACGG +
Preference number: 4 (lower is better)
Translates to: PPSLFKMDRAGMGTWCQQHTAAH*CSAAGR
Trigger: CCGTCCTGCAGCTGAACACCAATGAGCGGCTGTGTG...CTGCTGGCACCAGGTCCCCATGCCAGCCCTGTCCATTTTGAACAGTGAAGGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000002976.5
CDS-3UTR CCA 90 bp TCACTGTACCCCGAGGTAGAGCTCTCCAGGGATCTGGTGGCTGCAGCCCATGAAAGGGACCTGCTCTGCTaGCAGCACCATGCTTTGGAG +
Preference number: 4 (lower is better)
Translates to: SLYPEVELSRDLVAAAHERDLLC*QHHALE
Trigger: CTCCAAAGCATGGTGCTGCCAGCAGAGCAGGTCCCT...TTCATGGGCTGCAGCCACCAGATCCCTGGAGAGCTCTACCTCGGGGTACAGTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002976.5
CDS-3UTR GCA 90 bp TCACTGTACCCCGAGGTAGAGCTCTCCAGGGATCTGGTGGCTGCAGCCCATGAATGTCCACTCAGGCTCTaGTGCAGCACCGAGAGCATT +
Preference number: 4 (lower is better)
Translates to: SLYPEVELSRDLVAAAHECPLRL*CSTESI
Trigger: AATGCTCTCGGTGCTGCAGCAGAGCCTGAGTGGACA...TTCATGGGCTGCAGCCACCAGATCCCTGGAGAGCTCTACCTCGGGGTACAGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002976.5
CDS-3UTR TCA 90 bp TCACTGTACCCCGAGGTAGAGCTCTCCAGGGATCTGGTGGCTGCAGCCCATGAAATGCTTTGGAGGGTGTaGGCCACTAGCTCTCTCTGT +
Preference number: 4 (lower is better)
Translates to: SLYPEVELSRDLVAAAHEMLWRV*ATSSLC
Trigger: ACAGAGAGAGCTAGTGGCTCACACCCTCCAAAGCAT...TTCATGGGCTGCAGCCACCAGATCCCTGGAGAGCTCTACCTCGGGGTACAGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002976.5
CDS-3UTR CCA 90 bp GTGCTGAATACTGAGCCTGGGTCCTCTGAGAAAGCAGCAAGTGCTCTTCCGCCACGAGGTACAGGATGCTaGCATCTGTCTGCAGGGTCC +
Preference number: 4 (lower is better)
Translates to: VLNTEPGSSEKAASALPPRGTGC*HLSAGS
Trigger: GGACCCTGCAGACAGATGCCAGCATCCTGTACCTCG...TGGCGGAAGAGCACTTGCTGCTTTCTCAGAGGACCCAGGCTCAGTATTCAGCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002976.5
CDS-3UTR CCA 90 bp GGCTGGAGCCTACAGTATCGCCTGGTGGCCCTTGGTGAGCAGGTCTCCTCTGGAATGATCTTGGATTTGTaGTTTGGGTCCCCATCAGGG +
Preference number: 4 (lower is better)
Translates to: GWSLQYRLVALGEQVSSGMILDL*FGSPSG
Trigger: CCCTGATGGGGACCCAAACCACAAATCCAAGATCAT...TCCAGAGGAGACCTGCTCACCAAGGGCCACCAGGCGATACTGTAGGCTCCAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002976.5
CDS-3UTR CCA 90 bp GCCCTACGTGGAGTCAGACATGGTAGAGAGCAGTTCTGGGCTGATGTGGGGCTGAGGGAGGGAAGATCTTaGCCATCAGCTAAGCAGAGG +
Preference number: 4 (lower is better)
Translates to: ALRGVRHGREQFWADVGLREGRS*PSAKQR
Trigger: CCTCTGCTTAGCTGATGGCCAAGATCTTCCCTCCCT...CAGCCCCACATCAGCCCAGAACTGCTCTCTACCATGTCTGACTCCACGTAGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002976.5
CDS-3UTR CCA 90 bp CCACCTTCACTGTTCAAAATGGACAGGGCTGGCATGGGGACCTGGTGCCAGCAGAAGAAAAGCTGCCTCTaGAGCTTCCTCAGGCTCCGT +
Preference number: 4 (lower is better)
Translates to: PPSLFKMDRAGMGTWCQQKKSCL*SFLRLR
Trigger: ACGGAGCCTGAGGAAGCTCCAGAGGCAGCTTTTCTT...CTGCTGGCACCAGGTCCCCATGCCAGCCCTGTCCATTTTGAACAGTGAAGGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000002976.5
CDS-3UTR GCA 90 bp GCCCTACGTGGAGTCAGACATGGTAGAGAGCAGTTCTGGGCTGATGTGGGGCTGACCTCAGAGATAACCTaGTCTTCCAGGAGGTCAAGG +
Preference number: 4 (lower is better)
Translates to: ALRGVRHGREQFWADVGLTSEIT*SSRRSR
Trigger: CCTTGACCTCCTGGAAGAGCAGGTTATCTCTGAGGT...CAGCCCCACATCAGCCCAGAACTGCTCTCTACCATGTCTGACTCCACGTAGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002976.5
CDS-3UTR GCA 90 bp GGTGATGTGACAGCCAGGAGCATGCTACCCTGCCAGCTCCTTGTGTTAGCCTCCGATCATGTTCATGGCTaGAGTGAAAAGGTCCCCAGC +
Preference number: 4 (lower is better)
Translates to: GDVTARSMLPCQLLVLASDHVHG*SEKVPS
Trigger: GCTGGGGACCTTTTCACTGCAGCCATGAACATGATC...GGAGGCTAACACAAGGAGCTGGCAGGGTAGCATGCTCCTGGCTGTCACATCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000002976.5
CDS-3UTR CCA 90 bp TCTGCAGCCAGGGCAGCAGCCCTCTATTCATCCTGGCTAATTTTACATCCTTACTCTGTCATGGGCAGCTaGGCAGCTGCTCCACTGCCG +
Preference number: 4 (lower is better)
Translates to: SAARAAALYSSWLILHPYSVMGS*AAAPLP
Trigger: CGGCAGTGGAGCAGCTGCCCAGCTGCCCATGACAGA...GTAAGGATGTAAAATTAGCCAGGATGAATAGAGGGCTGCTGCCCTGGCTGCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002976.5
3UTR CAA 72 bp TCAGCTCCAATGCAGCTGGAAGCCTGGCTAAGGGACTaGCGTGTGAGCCTTCCGAAGCAGTGCCAAGAAACT +
Preference number: 4 (lower is better)
Translates to: SAPMQLEAWLRD*RVSLPKQCQET
Trigger: AGTTTCTTGGCACTGCTTCGGAAGGCTCACACGCAAGTCCCTTAGCCAGGCTTCCAGCTGCATTGGAGCTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002976.5
CDS-3UTR TCA 90 bp CCACCTTCACTGTTCAAAATGGACAGGGCTGGCATGGGGACCTGGTGCCAGCAGCGGGCAAGATGCCATTaGTTTTGGAGTCATCACCAT +
Preference number: 4 (lower is better)
Translates to: PPSLFKMDRAGMGTWCQQRARCH*FWSHHH
Trigger: ATGGTGATGACTCCAAAATCAATGGCATCTTGCCCG...CTGCTGGCACCAGGTCCCCATGCCAGCCCTGTCCATTTTGAACAGTGAAGGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000002976.5
CDS-3UTR GCA 90 bp TTGTCTTACTTCCGGGACTGGGGATGCAACCCAGGGTCTCAGGCTGAGCGAGCCAGGGTCCACTCAACATaGAACACAGGGACTAATTCT +
Preference number: 4 (lower is better)
Translates to: LSYFRDWGCNPGSQAERARVHST*NTGTNS
Trigger: AGAATTAGTCCCTGTGTTGCATGTTGAGTGGACCCT...GGCTCGCTCAGCCTGAGACCCTGGGTTGCATCCCCAGTCCCGGAAGTAAGACAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002976.5
CDS-3UTR GCA 90 bp CCCTTACTCTTTCCTTGTTCATCCCCACCACCACACACACACACACACACACACCTCTCCACCATCTCCTaGTTCTGTCGGCTCACCCAG +
Preference number: 4 (lower is better)
Translates to: PLLFPCSSPPPHTHTHTHLSTIS*FCRLTQ
Trigger: CTGGGTGAGCCGACAGAAGCAGGAGATGGTGGAGAG...GTGTGTGTGTGTGTGTGTGTGTGGTGGTGGGGATGAACAAGGAAAGAGTAAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002976.5
CDS-3UTR CCA 90 bp TCTGCAGCCAGGGCAGCAGCCCTCTATTCATCCTGGCTAATTTTACATCCTTACGGTGCCGAAGCAGGCTaGCCTCTTGAAGTCTGGCAG +
Preference number: 4 (lower is better)
Translates to: SAARAAALYSSWLILHPYGAEAG*PLEVWQ
Trigger: CTGCCAGACTTCAAGAGGCCAGCCTGCTTCGGCACC...GTAAGGATGTAAAATTAGCCAGGATGAATAGAGGGCTGCTGCCCTGGCTGCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002976.5
CDS-3UTR CCA 90 bp TACAGTGACATACTTTCCTCTGACCTTGAGGGCCTCCCGAGTTCTCCTGTTATGAGGATGCTGTTCCTCTaGACCCCCAGCAGCGGGCAA +
Preference number: 4 (lower is better)
Translates to: YSDILSSDLEGLPSSPVMRMLFL*TPSSGQ
Trigger: TTGCCCGCTGCTGGGGGTCCAGAGGAACAGCATCCT...CATAACAGGAGAACTCGGGAGGCCCTCAAGGTCAGAGGAAAGTATGTCACTGTA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000002976.5
CDS-3UTR CCA 90 bp TGTCACCTCTTAGAGCTTCACTTCACAGGAGCCTTCAGATGTCAGCTGCTCAGTGGGATTCTGCTCTTCTaGGGTGGGTCTCCGTGGCTC +
Preference number: 4 (lower is better)
Translates to: CHLLELHFTGAFRCQLLSGILLF*GGSPWL
Trigger: GAGCCACGGAGACCCACCCCAGAAGAGCAGAATCCC...ACTGAGCAGCTGACATCTGAAGGCTCCTGTGAAGTGAAGCTCTAAGAGGTGACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002976.5
3UTR CAA 72 bp GGTGGGGGTGCAAGCCCCTTTACCTGTGGAGCCACCTaGTTTCCTGTCTTGAGAGAGGGTCTTACTATTACC +
Preference number: 4 (lower is better)
Translates to: GGGASPFTCGAT*FPVLREGLTIT
Trigger: GGTAATAGTAAGACCCTCTCTCAAGACAGGAAACAAGGTGGCTCCACAGGTAAAGGGGCTTGCACCCCCACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000002976.5
3UTR CAA 72 bp CAGTGTCATGTGTGTGTGCCAGCCATGAAATCTGTGTaGAGATCAGACTCTCTCCTTCCAGGCAGGCCCTGG +
Preference number: 4 (lower is better)
Translates to: QCHVCVPAMKSV*RSDSLLPGRPW
Trigger: CCAGGGCCTGCCTGGAAGGAGAGAGTCTGATCTCAACACAGATTTCATGGCTGGCACACACACATGACACTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002976.5
CDS-3UTR TCA 90 bp GAGCTCTCCAGGGATCTGGTGGCTGCAGCCCATGAAGAATCACATGCCGCAGCCAGTCAGGCACAAAGATaGTCTTGGATTTGTGGTTTG +
Preference number: 4 (lower is better)
Translates to: ELSRDLVAAAHEESHAAASQAQR*SWICGL
Trigger: CAAACCACAAATCCAAGATCATCTTTGTGCCTGACT...GGCTGCGGCATGTGATTCTTCATGGGCTGCAGCCACCAGATCCCTGGAGAGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002976.5
CDS-3UTR TCA 90 bp TACAGTGACATACTTTCCTCTGACCTTGAGGGCCTCCCGAGTTCTCCTGTTATGCAGTGCCACAGGCAGTaGTCAGGAACTGGGCGAACT +
Preference number: 4 (lower is better)
Translates to: YSDILSSDLEGLPSSPVMQCHRQ*SGTGRT
Trigger: AGTTCGCCCAGTTCCTGATCACTGCCTGTGGCACTG...CATAACAGGAGAACTCGGGAGGCCCTCAAGGTCAGAGGAAAGTATGTCACTGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002976.5
CDS-3UTR GCA 90 bp TTCTGGGCTGATGTGGGGCTGATTTGCTGCTGGGAGAACTTACGTTTAAGTTCGCCTCGAGGTACAGGATaGTGGCATCTGTCTGCAGGG +
Preference number: 4 (lower is better)
Translates to: FWADVGLICCWENLRLSSPRGTG*WHLSAG
Trigger: CCCTGCAGACAGATGCCAGCATCCTGTACCTCGAGG...CGAACTTAAACGTAAGTTCTCCCAGCAGCAAATCAGCCCCACATCAGCCCAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002976.5
CDS-3UTR CCA 90 bp TATGTGCACTGTGTGCATGGGTATGCCTGGTGCCTGAAGAGGCCAAAAGAGCACCTTGGATTTGTGGTTTaGGTCCCCATCAGGGATGGG +
Preference number: 4 (lower is better)
Translates to: YVHCVHGYAWCLKRPKEHLGFVV*VPIRDG
Trigger: CCCATCCCTGATGGGGACCCAAACCACAAATCCAAG...GTGCTCTTTTGGCCTCTTCAGGCACCAGGCATACCCATGCACACAGTGCACATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000002976.5
CDS-3UTR CCA 90 bp TGTCACCTCTTAGAGCTTCACTTCACAGGAGCCTTCAGATGTCAGCTGCTCAGTGTGAGCTCTCTGACATaGTGCATCCGGCCGGGTTCA +
Preference number: 4 (lower is better)
Translates to: CHLLELHFTGAFRCQLLSVSSLT*CIRPGS
Trigger: TGAACCCGGCCGGATGCACCATGTCAGAGAGCTCAC...ACTGAGCAGCTGACATCTGAAGGCTCCTGTGAAGTGAAGCTCTAAGAGGTGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002976.5
CDS-3UTR TCA 90 bp TACAGTGACATACTTTCCTCTGACCTTGAGGGCCTCCCGAGTTCTCCTGTTATGTGTTCATGGCTGCAGTaGAAAGGTCCCCAGCAGGCT +
Preference number: 4 (lower is better)
Translates to: YSDILSSDLEGLPSSPVMCSWLQ*KGPQQA
Trigger: AGCCTGCTGGGGACCTTTTCACTGCAGCCATGAACA...CATAACAGGAGAACTCGGGAGGCCCTCAAGGTCAGAGGAAAGTATGTCACTGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002976.5
CDS-3UTR GCA 90 bp TCTGCAGCCAGGGCAGCAGCCCTCTATTCATCCTGGCTAATTTTACATCCTTACAGCAAACAACGTAGGTaGCGAAGCAGGCTGGCCTCT +
Preference number: 4 (lower is better)
Translates to: SAARAAALYSSWLILHPYSKQRR*RSRLAS
Trigger: AGAGGCCAGCCTGCTTCGGCACCTACGTTGTTTGCT...GTAAGGATGTAAAATTAGCCAGGATGAATAGAGGGCTGCTGCCCTGGCTGCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002976.5
CDS-3UTR GCA 90 bp GAGGTAGGAACTAATGTGGTGCCCTTTTTAGAGAGAGCAACCTGGAGCCTGGGATCCCAGAAGAAAAGCTaGCTCTGGAGCTTCCTCAGG +
Preference number: 4 (lower is better)
Translates to: EVGTNVVPFLERATWSLGSQKKS*LWSFLR
Trigger: CCTGAGGAAGCTCCAGAGGCAGCTTTTCTTCTGGGA...TCCCAGGCTCCAGGTTGCTCTCTCTAAAAAGGGCACCACATTAGTTCCTACCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000002976.5
CDS-3UTR GCA 90 bp AGGTCTTGCTATGTTTTCACACTGGCCCTGAACACCTGGCTTCAGGAGATCATCTCATTGGTGTTCAGCTaGAGGACGGACAGCTCTGCA +
Preference number: 4 (lower is better)
Translates to: RSCYVFTLALNTWLQEIISLVFS*RTDSSA
Trigger: TGCAGAGCTGTCCGTCCTGCAGCTGAACACCAATGA...GATGATCTCCTGAAGCCAGGTGTTCAGGGCCAGTGTGAAAACATAGCAAGACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002976.5
CDS-3UTR GCA 90 bp AGCACAGGATTTCACACGCCTCTTCCTGCTTCTCAAGTTTTACATCACCCATTTCTCCACCACATGAGCTaGAGGGACCTGCTCTGCTGG +
Preference number: 4 (lower is better)
Translates to: STGFHTPLPASQVLHHPFLHHMS*RDLLCW
Trigger: CCAGCAGAGCAGGTCCCTGCAGCTCATGTGGTGGAG...AAATGGGTGATGTAAAACTTGAGAAGCAGGAAGAGGCGTGTGAAATCCTGTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002976.5
CDS-3UTR GCA 90 bp GGATTTCACACGCCTCTTCCTGCTTCTCAAGTTTTACATCACCCATTTCTATACCCTCCTCAGAGGGTGTaGAGCCCTCGAGGACCACCT +
Preference number: 4 (lower is better)
Translates to: GFHTPLPASQVLHHPFLYPPQRV*SPRGPP
Trigger: AGGTGGTCCTCGAGGGCTGCACACCCTCTGAGGAGG...GTATAGAAATGGGTGATGTAAAACTTGAGAAGCAGGAAGAGGCGTGTGAAATCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002976.5
CDS-3UTR CCA 90 bp TTCTGGGCTGATGTGGGGCTGATTTGCTGCTGGGAGAACTTACGTTTAAGTTCGACGGGGTCAGGTTTTTaGGGTGGATCCAGCTGTCAT +
Preference number: 4 (lower is better)
Translates to: FWADVGLICCWENLRLSSTGSGF*GGSSCH
Trigger: ATGACAGCTGGATCCACCCCAAAAACCTGACCCCGT...CGAACTTAAACGTAAGTTCTCCCAGCAGCAAATCAGCCCCACATCAGCCCAGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000002976.5
CDS-3UTR CCA 90 bp GGATTTCACACGCCTCTTCCTGCTTCTCAAGTTTTACATCACCCATTTCTATACTGGGGTGGGTCTCCGTaGCTCCAAGCTGTTCCAGCC +
Preference number: 4 (lower is better)
Translates to: GFHTPLPASQVLHHPFLYWGGSP*LQAVPA
Trigger: GGCTGGAACAGCTTGGAGCCACGGAGACCCACCCCA...GTATAGAAATGGGTGATGTAAAACTTGAGAAGCAGGAAGAGGCGTGTGAAATCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000002976.5
CDS-3UTR TCA 90 bp TGTCACCTCTTAGAGCTTCACTTCACAGGAGCCTTCAGATGTCAGCTGCTCAGTACAGAAACTGGAACTTaGCACACAGCCGCTCATTGG +
Preference number: 4 (lower is better)
Translates to: CHLLELHFTGAFRCQLLSTETGT*HTAAHW
Trigger: CCAATGAGCGGCTGTGTGTCAAGTTCCAGTTTCTGT...ACTGAGCAGCTGACATCTGAAGGCTCCTGTGAAGTGAAGCTCTAAGAGGTGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002976.5
CDS-3UTR TCA 90 bp TCTGCAGCCAGGGCAGCAGCCCTCTATTCATCCTGGCTAATTTTACATCCTTACATTCATTCCACAGGGTaGAGTCCACTCGCAGATGCT +
Preference number: 4 (lower is better)
Translates to: SAARAAALYSSWLILHPYIHSTG*SPLADA
Trigger: AGCATCTGCGAGTGGACTTCACCCTGTGGAATGAAT...GTAAGGATGTAAAATTAGCCAGGATGAATAGAGGGCTGCTGCCCTGGCTGCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002976.5
CDS-3UTR GCA 90 bp TCTGCAGCCAGGGCAGCAGCCCTCTATTCATCCTGGCTAATTTTACATCCTTACCAGGGGAATGTAGTCTaGAACTGGCTTGGGAACTGT +
Preference number: 4 (lower is better)
Translates to: SAARAAALYSSWLILHPYQGNVV*NWLGNC
Trigger: ACAGTTCCCAAGCCAGTTGCAGACTACATTCCCCTG...GTAAGGATGTAAAATTAGCCAGGATGAATAGAGGGCTGCTGCCCTGGCTGCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000002976.5
CDS-3UTR GCA 90 bp TCTGACAGCAGGCACCAGTTTCTAGAATTTCTAACATTCATGATGAGCAAAGACGGGCAGCTGCTCCACTaGCGTCTGGGAGATGGAGAG +
Preference number: 4 (lower is better)
Translates to: SDSRHQFLEFLTFMMSKDGQLLH*RLGDGE
Trigger: CTCTCCATCTCCCAGACGGCAGTGGAGCAGCTGCCC...GTCTTTGCTCATCATGAATGTTAGAAATTCTAGAAACTGGTGCCTGCTGTCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002976.5
CDS-3UTR GCA 90 bp TCTGACAGCAGGCACCAGTTTCTAGAATTTCTAACATTCATGATGAGCAAAGACTCCGACTGCACCGACTaGCGCTGCTCCTCCTCAGAG +
Preference number: 4 (lower is better)
Translates to: SDSRHQFLEFLTFMMSKDSDCTD*RCSSSE
Trigger: CTCTGAGGAGGAGCAGCGGCAGTCGGTGCAGTCGGA...GTCTTTGCTCATCATGAATGTTAGAAATTCTAGAAACTGGTGCCTGCTGTCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002976.5
CDS-3UTR CCA 90 bp TCTGCAGCCAGGGCAGCAGCCCTCTATTCATCCTGGCTAATTTTACATCCTTACAGCATGGACAGAAACTaGAACTTGACACACAGCCGC +
Preference number: 4 (lower is better)
Translates to: SAARAAALYSSWLILHPYSMDRN*NLTHSR
Trigger: GCGGCTGTGTGTCAAGTTCCAGTTTCTGTCCATGCT...GTAAGGATGTAAAATTAGCCAGGATGAATAGAGGGCTGCTGCCCTGGCTGCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002976.5
CDS-3UTR CCA 90 bp TCTGCAGCCAGGGCAGCAGCCCTCTATTCATCCTGGCTAATTTTACATCCTTACGGATCTACCACAAAGTaGCTGAAGGAAAACCGCCAC +
Preference number: 4 (lower is better)
Translates to: SAARAAALYSSWLILHPYGSTTK*LKENRH
Trigger: GTGGCGGTTTTCCTTCAGCCACTTTGTGGTAGATCC...GTAAGGATGTAAAATTAGCCAGGATGAATAGAGGGCTGCTGCCCTGGCTGCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000002976.5
CDS-3UTR CCA 90 bp TACAGTGACATACTTTCCTCTGACCTTGAGGGCCTCCCGAGTTCTCCTGTTATGTGGCCTCTTGAAGTCTaGCAGGATCATGTTCATGGC +
Preference number: 4 (lower is better)
Translates to: YSDILSSDLEGLPSSPVMWPLEV*QDHVHG
Trigger: GCCATGAACATGATCCTGCCAGACTTCAAGAGGCCA...CATAACAGGAGAACTCGGGAGGCCCTCAAGGTCAGAGGAAAGTATGTCACTGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002976.5
3UTR CAA 72 bp TACTGTAGTTATACAGTGACATACTTTCCTCTGACCTaGAGGGCCTCCCGAGTTCTCCTGTTATGCCACGCC +
Preference number: 4 (lower is better)
Translates to: YCSYTVTYFPLT*RASRVLLLCHA
Trigger: GGCGTGGCATAACAGGAGAACTCGGGAGGCCCTCAAGGTCAGAGGAAAGTATGTCACTGTATAACTACAGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002976.5
3UTR CAA 72 bp GGTCTTACTATTACCAAGGTTGGCGTGGAACTCCTGTaGAGACTCAAATGTGGCACCATGCCAGGCCAAAAC +
Preference number: 4 (lower is better)
Translates to: GLTITKVGVELL*RLKCGTMPGQN
Trigger: GTTTTGGCCTGGCATGGTGCCACATTTGAGTCTCAACAGGAGTTCCACGCCAACCTTGGTAATAGTAAGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002976.5
3UTR CAA 72 bp CAATTAGGCTCAAGACAGGAGAGTGCACTCAGGAGTTaGCCTAGAGATGCAGGGAAATGCCTGTCAGGAGTA +
Preference number: 4 (lower is better)
Translates to: QLGSRQESALRS*PRDAGKCLSGV
Trigger: TACTCCTGACAGGCATTTCCCTGCATCTCTAGGCAAACTCCTGAGTGCACTCTCCTGTCTTGAGCCTAATTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002976.5
CDS-3UTR TCA 90 bp CTCAAATGTGGCACCATGCCAGGCCAAAACAGTTTCATTAGGCACGGTTCAGAAGACAAGTACTATTCTTaGCTCTGCAGCTCAGCCCCT +
Preference number: 4 (lower is better)
Translates to: LKCGTMPGQNSFIRHGSEDKYYS*LCSSAP
Trigger: AGGGGCTGAGCTGCAGAGTCAAGAATAGTACTTGTC...TTCTGAACCGTGCCTAATGAAACTGTTTTGGCCTGGCATGGTGCCACATTTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000002976.5
CDS-3UTR TCA 90 bp TCTGCAGCCAGGGCAGCAGCCCTCTATTCATCCTGGCTAATTTTACATCCTTACCACTACAGATGCCACTaGAGTAGCAAACAACGTAGG +
Preference number: 4 (lower is better)
Translates to: SAARAAALYSSWLILHPYHYRCH*SSKQRR
Trigger: CCTACGTTGTTTGCTACTTCAGTGGCATCTGTAGTG...GTAAGGATGTAAAATTAGCCAGGATGAATAGAGGGCTGCTGCCCTGGCTGCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002976.5
CDS-3UTR CCA 90 bp TACAGTGACATACTTTCCTCTGACCTTGAGGGCCTCCCGAGTTCTCCTGTTATGCTGGCTTGGGAACTGTaGTATTTGAGATTACTGGGC +
Preference number: 4 (lower is better)
Translates to: YSDILSSDLEGLPSSPVMLAWEL*YLRLLG
Trigger: GCCCAGTAATCTCAAATACCACAGTTCCCAAGCCAG...CATAACAGGAGAACTCGGGAGGCCCTCAAGGTCAGAGGAAAGTATGTCACTGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002976.5
CDS-3UTR CCA 90 bp AGCACAGGATTTCACACGCCTCTTCCTGCTTCTCAAGTTTTACATCACCCATTTGCATCGCCTTGGAGGTaGTCAGGTGACATCATTGGG +
Preference number: 4 (lower is better)
Translates to: STGFHTPLPASQVLHHPFASPWR*SGDIIG
Trigger: CCCAATGATGTCACCTGACCACCTCCAAGGCGATGC...AAATGGGTGATGTAAAACTTGAGAAGCAGGAAGAGGCGTGTGAAATCCTGTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002976.5
CDS-3UTR TCA 90 bp CGCCCTGGAGCTACTTTAAACAACCTCTCTTACTGTAGTTATACAGTGACATACCATTTAGGCAGCTGCTaGAGAAGGGCTGGACCTGCA +
Preference number: 4 (lower is better)
Translates to: RPGATLNNLSYCSYTVTYHLGSC*RRAGPA
Trigger: TGCAGGTCCAGCCCTTCTTCAGCAGCTGCCTAAATG...GTATGTCACTGTATAACTACAGTAAGAGAGGTTGTTTAAAGTAGCTCCAGGGCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002976.5
CDS-3UTR TCA 90 bp CGCCCTGGAGCTACTTTAAACAACCTCTCTTACTGTAGTTATACAGTGACATACAGCAGGCTGGCCTCTTaGAGTCTGGCAGGATCATGT +
Preference number: 4 (lower is better)
Translates to: RPGATLNNLSYCSYTVTYSRLAS*SLAGSC
Trigger: ACATGATCCTGCCAGACTTCAAGAGGCCAGCCTGCT...GTATGTCACTGTATAACTACAGTAAGAGAGGTTGTTTAAAGTAGCTCCAGGGCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002976.5
CDS-3UTR TCA 90 bp TCTGACAGCAGGCACCAGTTTCTAGAATTTCTAACATTCATGATGAGCAAAGACGAGTGGCAAGTCATCTaGGTCCACGGGGAGGCAAAG +
Preference number: 4 (lower is better)
Translates to: SDSRHQFLEFLTFMMSKDEWQVI*VHGEAK
Trigger: CTTTGCCTCCCCGTGGACTCAGATGACTTGCCACTC...GTCTTTGCTCATCATGAATGTTAGAAATTCTAGAAACTGGTGCCTGCTGTCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002976.5
CDS-3UTR GCA 90 bp CGCCCTGGAGCTACTTTAAACAACCTCTCTTACTGTAGTTATACAGTGACATACTGGGGGAGTCAGGTCTaGTACGGGCAAGATGCCATT +
Preference number: 4 (lower is better)
Translates to: RPGATLNNLSYCSYTVTYWGSQV*YGQDAI
Trigger: AATGGCATCTTGCCCGTAGCAGACCTGACTCCCCCA...GTATGTCACTGTATAACTACAGTAAGAGAGGTTGTTTAAAGTAGCTCCAGGGCG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000002976.5
CDS-3UTR GCA 90 bp GTGCTGGGACTTCAGGTATACAACACTATGTCAGATTCAGATGTTCACATTTCTTCCCGCACCAGGGGCTaGTGTTTGACAATTCCTCCC +
Preference number: 4 (lower is better)
Translates to: VLGLQVYNTMSDSDVHISSRTRG*CLTIPP
Trigger: GGGAGGAATTGTCAAACAGCAGCCCCTGGTGCGGGA...AGAAATGTGAACATCTGAATCTGACATAGTGTTGTATACCTGAAGTCCCAGCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002976.5
CDS-3UTR CCA 90 bp CTCAAATGTGGCACCATGCCAGGCCAAAACAGTTTCATTAGGCACGGTTCAGAAGTCACTTCATACTCCTaGCCAGGATCTACCACAAAG +
Preference number: 4 (lower is better)
Translates to: LKCGTMPGQNSFIRHGSEVTSYS*PGSTTK
Trigger: CTTTGTGGTAGATCCTGGCCAGGAGTATGAAGTGAC...TTCTGAACCGTGCCTAATGAAACTGTTTTGGCCTGGCATGGTGCCACATTTGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002976.5
CDS-3UTR CCA 90 bp AGGTCTTGCTATGTTTTCACACTGGCCCTGAACACCTGGCTTCAGGAGATCATCACATCAAAGCAGCTGTaGTTCTCTGAGTCGGAGAAA +
Preference number: 4 (lower is better)
Translates to: RSCYVFTLALNTWLQEIITSKQL*FSESEK
Trigger: TTTCTCCGACTCAGAGAACCACAGCTGCTTTGATGT...GATGATCTCCTGAAGCCAGGTGTTCAGGGCCAGTGTGAAAACATAGCAAGACCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002976.5
CDS-3UTR CCA 90 bp AGCACAGGATTTCACACGCCTCTTCCTGCTTCTCAAGTTTTACATCACCCATTTGTCAGGTTTTTGGGGTaGATCCAGCTGTCATCCAGA +
Preference number: 4 (lower is better)
Translates to: STGFHTPLPASQVLHHPFVRFLG*IQLSSR
Trigger: TCTGGATGACAGCTGGATCCACCCCAAAAACCTGAC...AAATGGGTGATGTAAAACTTGAGAAGCAGGAAGAGGCGTGTGAAATCCTGTGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000002976.5
CDS-3UTR CCA 90 bp TGTTTTCACACTGGCCCTGAACACCTGGCTTCAGGAGATCATCAAGTCTCAGTTAAATCTGTCCATGAGTaGGTACCTGGAGGTGATGTT +
Preference number: 4 (lower is better)
Translates to: CFHTGPEHLASGDHQVSVKSVHE*VPGGDV
Trigger: AACATCACCTCCAGGTACCCACTCATGGACAGATTT...AACTGAGACTTGATGATCTCCTGAAGCCAGGTGTTCAGGGCCAGTGTGAAAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002976.5
3UTR CAA 72 bp CAGTACCAAGATGTCTGCATTGATTTCTCTGAGGTCTaGCTATGTTTTCACACTGGCCCTGAACACCTGGCT +
Preference number: 4 (lower is better)
Translates to: QYQDVCIDFSEV*LCFHTGPEHLA
Trigger: AGCCAGGTGTTCAGGGCCAGTGTGAAAACATAGCAAGACCTCAGAGAAATCAATGCAGACATCTTGGTACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002976.5
CDS-3UTR CCA 90 bp CTCAAATGTGGCACCATGCCAGGCCAAAACAGTTTCATTAGGCACGGTTCAGAAACTAATTCTCCGTGCTaGGTAGAGGAAACACTAAGA +
Preference number: 4 (lower is better)
Translates to: LKCGTMPGQNSFIRHGSETNSPC*VEETLR
Trigger: TCTTAGTGTTTCCTCTACCCAGCACGGAGAATTAGT...TTCTGAACCGTGCCTAATGAAACTGTTTTGGCCTGGCATGGTGCCACATTTGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002976.5
CDS-3UTR CCA 90 bp GGATTTCACACGCCTCTTCCTGCTTCTCAAGTTTTACATCACCCATTTCTATACAGTCTGCAACTGGCTTaGGAACTGTGGTATTTGAGA +
Preference number: 4 (lower is better)
Translates to: GFHTPLPASQVLHHPFLYSLQLA*ELWYLR
Trigger: TCTCAAATACCACAGTTCCCAAGCCAGTTGCAGACT...GTATAGAAATGGGTGATGTAAAACTTGAGAAGCAGGAAGAGGCGTGTGAAATCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002976.5
3UTR CAA 72 bp TTAAGCTTCTTAGTGGCTAAGGCTGTGTCATGTAACTaGTTTTTGAATTCCAAATGTCTGATGAATAGTAGG +
Preference number: 4 (lower is better)
Translates to: LSFLVAKAVSCN*FLNSKCLMNSR
Trigger: CCTACTATTCATCAGACATTTGGAATTCAAAAACAAGTTACATGACACAGCCTTAGCCACTAAGAAGCTTAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000002976.5
CDS GCA 90 bp CCTGGTCCGACTGCACCGACTGCCGCTGCTCCTCCTCAGAGGGTGTaGAGCCCTCGAGGACCACCTCTGGCCTCGGCCAGCTCTCCAGGG +
Preference number: 5 (lower is better)
Translates to: PGPTAPTAAAPPQRV*SPRGPPLASASSPG
Trigger: CCCTGGAGAGCTGGCCGAGGCCAGAGGTGGTCCTCGAGGGCTGCACACCCTCTGAGGAGGAGCAGCGGCAGTCGGTGCAGTCGGACCAGG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002976.5
CDS CCA 90 bp ACCCCCAGCAGCGGGCAAGCCTCGCTGTCCTCTGTCATGGGCAGCTaGGCAGCTGCTCCACTGCCGTCTGGGAGATGGAGAGGCTCCACC +
Preference number: 5 (lower is better)
Translates to: TPSSGQASLSSVMGS*AAAPLPSGRWRGST
Trigger: GGTGGAGCCTCTCCATCTCCCAGACGGCAGTGGAGCAGCTGCCCAGCTGCCCATGACAGAGGACAGCGAGGCTTGCCCGCTGCTGGGGGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000002976.5
CDS CCA 90 bp TCCTCTGGACCCCCAGCAGCGGGCAAGCCTCGCTGTCCTCTGTCATaGGCAGCTGGGCAGCTGCTCCACTGCCGTCTGGGAGATGGAGAG +
Preference number: 5 (lower is better)
Translates to: SSGPPAAGKPRCPLS*AAGQLLHCRLGDGE
Trigger: CTCTCCATCTCCCAGACGGCAGTGGAGCAGCTGCCCAGCTGCCCATGACAGAGGACAGCGAGGCTTGCCCGCTGCTGGGGGTCCAGAGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000002976.5
CDS GCA 90 bp CAGCGGGCAAGCCTCGCTGTCCTCTGTCATGGGCAGCTGGGCAGCTaGTCCACTGCCGTCTGGGAGATGGAGAGGCTCCACCACATGAGC +
Preference number: 5 (lower is better)
Translates to: QRASLAVLCHGQLGS*STAVWEMERLHHMS
Trigger: GCTCATGTGGTGGAGCCTCTCCATCTCCCAGACGGCAGTGGAGCAGCTGCCCAGCTGCCCATGACAGAGGACAGCGAGGCTTGCCCGCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002976.5
CDS GCA 90 bp TCATCCAGACAAGTACTATTCTTGACTCTGCAGCTCAGCCCCTCCTaGGCGCAGACCGGAGCCGGGAAGTCGAGGAGGCGCGGGGAGGCG +
Preference number: 5 (lower is better)
Translates to: SSRQVLFLTLQLSPS*AQTGAGKSRRRGEA
Trigger: CGCCTCCCCGCGCCTCCTCGACTTCCCGGCTCCGGTCTGCGCGCAGGAGGGGCTGAGCTGCAGAGTCAAGAATAGTACTTGTCTGGATGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000002976.5
CDS CCA 90 bp GCTGTCCTCTGTCATGGGCAGCTGGGCAGCTGCTCCACTGCCGTCTaGGAGATGGAGAGGCTCCACCACATGAGCTGCAGGGACCTGCTC +
Preference number: 5 (lower is better)
Translates to: AVLCHGQLGSCSTAV*EMERLHHMSCRDLL
Trigger: GAGCAGGTCCCTGCAGCTCATGTGGTGGAGCCTCTCCATCTCCCAGACGGCAGTGGAGCAGCTGCCCAGCTGCCCATGACAGAGGACAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002976.5
CDS TCA 90 bp GCAGCTGCTCCACTGCCGTCTGGGAGATGGAGAGGCTCCACCACATaGGCTGCAGGGACCTGCTCTGCTGGCAGCACCATGCTTTGGAGG +
Preference number: 5 (lower is better)
Translates to: AAAPLPSGRWRGSTT*AAGTCSAGSTMLWR
Trigger: CCTCCAAAGCATGGTGCTGCCAGCAGAGCAGGTCCCTGCAGCTCATGTGGTGGAGCCTCTCCATCTCCCAGACGGCAGTGGAGCAGCTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002976.5
CDS GCA 90 bp AAGCCTCGCTGTCCTCTGTCATGGGCAGCTGGGCAGCTGCTCCACTaGCGTCTGGGAGATGGAGAGGCTCCACCACATGAGCTGCAGGGA +
Preference number: 5 (lower is better)
Translates to: KPRCPLSWAAGQLLH*RLGDGEAPPHELQG
Trigger: TCCCTGCAGCTCATGTGGTGGAGCCTCTCCATCTCCCAGACGGCAGTGGAGCAGCTGCCCAGCTGCCCATGACAGAGGACAGCGAGGCTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002976.5
CDS CCA 90 bp GGCAAGTCATCTGAGTCCACGGGGAGGCAAAGGATGCTGTTCCTCTaGACCCCCAGCAGCGGGCAAGCCTCGCTGTCCTCTGTCATGGGC +
Preference number: 5 (lower is better)
Translates to: GKSSESTGRQRMLFL*TPSSGQASLSSVMG
Trigger: GCCCATGACAGAGGACAGCGAGGCTTGCCCGCTGCTGGGGGTCCAGAGGAACAGCATCCTTTGCCTCCCCGTGGACTCAGATGACTTGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000002976.5
CDS CCA 90 bp AGGTTCTCACGCTCGAACCAGTCGGGGCACTGGGTTTGCCACTCCTaGAACCTAAGCACAGCCTCCTTGAGCTGCCGGCCACTAGGGCTC +
Preference number: 5 (lower is better)
Translates to: RFSRSNQSGHWVCHS*NLSTASLSCRPLGL
Trigger: GAGCCCTAGTGGCCGGCAGCTCAAGGAGGCTGTGCTTAGGTTCCAGGAGTGGCAAACCCAGTGCCCCGACTGGTTCGAGCGTGAGAACCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002976.5
CDS GCA 90 bp GCTAAGCAGAGGTTCTCACGCTCGAACCAGTCGGGGCACTGGGTTTaGCACTCCTGGAACCTAAGCACAGCCTCCTTGAGCTGCCGGCCA +
Preference number: 5 (lower is better)
Translates to: AKQRFSRSNQSGHWV*HSWNLSTASLSCRP
Trigger: TGGCCGGCAGCTCAAGGAGGCTGTGCTTAGGTTCCAGGAGTGGCAAACCCAGTGCCCCGACTGGTTCGAGCGTGAGAACCTCTGCTTAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002976.5
CDS GCA 90 bp TCTGGCCTCGGCCAGCTCTCCAGGGGCTGTCCACTCAGGCTCTGCTaGAGCACCGAGAGCATTAGGCTTTCTAGCTGCTCTCTTGCATCG +
Preference number: 5 (lower is better)
Translates to: SGLGQLSRGCPLRLC*STESIRLSSCSLAS
Trigger: CGATGCAAGAGAGCAGCTAGAAAGCCTAATGCTCTCGGTGCTGCAGCAGAGCCTGAGTGGACAGCCCCTGGAGAGCTGGCCGAGGCCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002976.5
CDS GCA 90 bp ACCTCTGGCCTCGGCCAGCTCTCCAGGGGCTGTCCACTCAGGCTCTaGTGCAGCACCGAGAGCATTAGGCTTTCTAGCTGCTCTCTTGCA +
Preference number: 5 (lower is better)
Translates to: TSGLGQLSRGCPLRL*CSTESIRLSSCSLA
Trigger: TGCAAGAGAGCAGCTAGAAAGCCTAATGCTCTCGGTGCTGCAGCAGAGCCTGAGTGGACAGCCCCTGGAGAGCTGGCCGAGGCCAGAGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002976.5
CDS GCA 90 bp TCTACCACAAGGCAGCCGTCAGATGGGAGTTCCCGCACCAGGGGCTaGTGTTTGACAATTCCTCCCCCTGGTGGCAGCAGTGGGTCTTCA +
Preference number: 5 (lower is better)
Translates to: STTRQPSDGSSRTRG*CLTIPPPGGSSGSS
Trigger: TGAAGACCCACTGCTGCCACCAGGGGGAGGAATTGTCAAACAGCAGCCCCTGGTGCGGGAACTCCCATCTGACGGCTGCCTTGTGGTAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000002976.5
CDS GCA 90 bp GCTCCACCACATGAGCTGCAGGGACCTGCTCTGCTGGCAGCACCATaGTTTGGAGGGTGTGAGCCACTAGCTCTCTCTGTGGCCATAGCT +
Preference number: 5 (lower is better)
Translates to: APPHELQGPALLAAP*FGGCEPLALSVAIA
Trigger: AGCTATGGCCACAGAGAGAGCTAGTGGCTCACACCCTCCAAAGCATGGTGCTGCCAGCAGAGCAGGTCCCTGCAGCTCATGTGGTGGAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002976.5
CDS CCA 90 bp CCATCAGCTAAGCAGAGGTTCTCACGCTCGAACCAGTCGGGGCACTaGGTTTGCCACTCCTGGAACCTAAGCACAGCCTCCTTGAGCTGC +
Preference number: 5 (lower is better)
Translates to: PSAKQRFSRSNQSGH*VCHSWNLSTASLSC
Trigger: GCAGCTCAAGGAGGCTGTGCTTAGGTTCCAGGAGTGGCAAACCCAGTGCCCCGACTGGTTCGAGCGTGAGAACCTCTGCTTAGCTGATGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002976.5
CDS-3UTR CAA 90 bp TCACTGTACCCCGAGGTAGAGCTCTCCAGGGATCTGGTGGCTGCAGCCCATGAAACACACAGCCGCTCATaGGTGTTCAGCTGCAGGACG +
Preference number: 5 (lower is better)
Translates to: SLYPEVELSRDLVAAAHETHSRS*VFSCRT
Trigger: CGTCCTGCAGCTGAACACCAATGAGCGGCTGTGTGT...TTCATGGGCTGCAGCCACCAGATCCCTGGAGAGCTCTACCTCGGGGTACAGTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002976.5
CDS GCA 90 bp TGTTCAGCTGCAGGACGGACAGCTCTGCACCCTCGAGGTACAGGATaGTGGCATCTGTCTGCAGGGTCCACTCAACATGCAACACAGGGA +
Preference number: 5 (lower is better)
Translates to: CSAAGRTALHPRGTG*WHLSAGSTQHATQG
Trigger: TCCCTGTGTTGCATGTTGAGTGGACCCTGCAGACAGATGCCAGCATCCTGTACCTCGAGGGTGCAGAGCTGTCCGTCCTGCAGCTGAACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002976.5
CDS GCA 90 bp TTCTGTCGGCTCACCCAGGTCATGACCCCCACCTCAGAGATAACCTaGTCTTCCAGGAGGTCAAGGGCTACTTCAGTGCCACAGGCAGTG +
Preference number: 5 (lower is better)
Translates to: FCRLTQVMTPTSEIT*SSRRSRATSVPQAV
Trigger: CACTGCCTGTGGCACTGAAGTAGCCCTTGACCTCCTGGAAGAGCAGGTTATCTCTGAGGTGGGGGTCATGACCTGGGTGAGCCGACAGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000002976.5
CDS CCA 90 bp TCAGCTGCAGGACGGACAGCTCTGCACCCTCGAGGTACAGGATGCTaGCATCTGTCTGCAGGGTCCACTCAACATGCAACACAGGGACTA +
Preference number: 5 (lower is better)
Translates to: SAAGRTALHPRGTGC*HLSAGSTQHATQGL
Trigger: TAGTCCCTGTGTTGCATGTTGAGTGGACCCTGCAGACAGATGCCAGCATCCTGTACCTCGAGGGTGCAGAGCTGTCCGTCCTGCAGCTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002976.5
CDS-3UTR CAA 90 bp GCTCAAGACAGGAGAGTGCACTCAGGAGTTTGCCTAGAGATGCAGGGAAATGCCCTAAGCACAGCCTCCTaGAGCTGCCGGCCACTAGGG +
Preference number: 5 (lower is better)
Translates to: AQDRRVHSGVCLEMQGNALSTAS*SCRPLG
Trigger: CCCTAGTGGCCGGCAGCTCAAGGAGGCTGTGCTTAG...GGCATTTCCCTGCATCTCTAGGCAAACTCCTGAGTGCACTCTCCTGTCTTGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002976.5
CDS TCA 90 bp GCCACCGCTTACGGTGATGCTGCAGCATGGACAGAAACTGGAACTTaGCACACAGCCGCTCATTGGTGTTCAGCTGCAGGACGGACAGCT +
Preference number: 5 (lower is better)
Translates to: ATAYGDAAAWTETGT*HTAAHWCSAAGRTA
Trigger: AGCTGTCCGTCCTGCAGCTGAACACCAATGAGCGGCTGTGTGTCAAGTTCCAGTTTCTGTCCATGCTGCAGCATCACCGTAAGCGGTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002976.5
CDS TCA 90 bp CCTGCTCTTCCAGGAGGTCAAGGGCTACTTCAGTGCCACAGGCAGTaGTCAGGAACTGGGCGAACTTTAGGACCACCTCCACATAGAGGG +
Preference number: 5 (lower is better)
Translates to: PALPGGQGLLQCHRQ*SGTGRTLGPPPHRG
Trigger: CCCTCTATGTGGAGGTGGTCCTAAAGTTCGCCCAGTTCCTGATCACTGCCTGTGGCACTGAAGTAGCCCTTGACCTCCTGGAAGAGCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002976.5
CDS GCA 90 bp ACGGACAGCTCTGCACCCTCGAGGTACAGGATGCTGGCATCTGTCTaGAGGGTCCACTCAACATGCAACACAGGGACTAATTCTCCGTGC +
Preference number: 5 (lower is better)
Translates to: TDSSAPSRYRMLASV*RVHSTCNTGTNSPC
Trigger: GCACGGAGAATTAGTCCCTGTGTTGCATGTTGAGTGGACCCTGCAGACAGATGCCAGCATCCTGTACCTCGAGGGTGCAGAGCTGTCCGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002976.5
CDS GCA 90 bp GACAGAAACTGGAACTTGACACACAGCCGCTCATTGGTGTTCAGCTaGAGGACGGACAGCTCTGCACCCTCGAGGTACAGGATGCTGGCA +
Preference number: 5 (lower is better)
Translates to: DRNWNLTHSRSLVFS*RTDSSAPSRYRMLA
Trigger: TGCCAGCATCCTGTACCTCGAGGGTGCAGAGCTGTCCGTCCTGCAGCTGAACACCAATGAGCGGCTGTGTGTCAAGTTCCAGTTTCTGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002976.5
CDS GCA 90 bp GCTCTCTTGCATCGCCTTGGAGGTGGTCAGGTGACATCATTGGGGTaGTACAGAGTGGCAAGTCATCTGAGTCCACGGGGAGGCAAAGGA +
Preference number: 5 (lower is better)
Translates to: ALLHRLGGGQVTSLG*YRVASHLSPRGGKG
Trigger: TCCTTTGCCTCCCCGTGGACTCAGATGACTTGCCACTCTGTAGCACCCCAATGATGTCACCTGACCACCTCCAAGGCGATGCAAGAGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000002976.5
CDS GCA 90 bp CCACTCAGGCTCTGCTGCAGCACCGAGAGCATTAGGCTTTCTAGCTaGTCTCTTGCATCGCCTTGGAGGTGGTCAGGTGACATCATTGGG +
Preference number: 5 (lower is better)
Translates to: PLRLCCSTESIRLSS*SLASPWRWSGDIIG
Trigger: CCCAATGATGTCACCTGACCACCTCCAAGGCGATGCAAGAGAGCAGCTAGAAAGCCTAATGCTCTCGGTGCTGCAGCAGAGCCTGAGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002976.5
CDS-3UTR CAA 90 bp CCACCTTCACTGTTCAAAATGGACAGGGCTGGCATGGGGACCTGGTGCCAGCAGTTTCTAGCTGCTCTCTaGCATCGCCTTGGAGGTGGT +
Preference number: 5 (lower is better)
Translates to: PPSLFKMDRAGMGTWCQQFLAAL*HRLGGG
Trigger: ACCACCTCCAAGGCGATGCAAGAGAGCAGCTAGAAA...CTGCTGGCACCAGGTCCCCATGCCAGCCCTGTCCATTTTGAACAGTGAAGGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000002976.5
CDS TCA 90 bp AGGGCACAGTCACAGCGTGTCTCAAACAGTCATTTAGGCAGCTGCTaGAGAAGGGCTGGACCTGCACGTGGTGATGGCAGCACCAGTGAA +
Preference number: 5 (lower is better)
Translates to: RAQSQRVSNSHLGSC*RRAGPARGDGSTSE
Trigger: TTCACTGGTGCTGCCATCACCACGTGCAGGTCCAGCCCTTCTTCAGCAGCTGCCTAAATGACTGTTTGAGACACGCTGTGACTGTGCCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002976.5
CDS CCA 90 bp TTCCAGCCAGGGTTCTTCTCGAGCTCCCAGAAGAAAAGCTGCCTCTaGAGCTTCCTCAGGCTCCGTAGTTCCTCAGGAGAGAGAGACTCA +
Preference number: 5 (lower is better)
Translates to: FQPGFFSSSQKKSCL*SFLRLRSSSGERDS
Trigger: TGAGTCTCTCTCTCCTGAGGAACTACGGAGCCTGAGGAAGCTCCAGAGGCAGCTTTTCTTCTGGGAGCTCGAGAAGAACCCTGGCTGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002976.5
CDS TCA 90 bp GGATCTACCACAAAGTGGCTGAAGGAAAACCGCCACCGCTTACGGTaGTGCTGCAGCATGGACAGAAACTGGAACTTGACACACAGCCGC +
Preference number: 5 (lower is better)
Translates to: GSTTKWLKENRHRLR*CCSMDRNWNLTHSR
Trigger: GCGGCTGTGTGTCAAGTTCCAGTTTCTGTCCATGCTGCAGCATCACCGTAAGCGGTGGCGGTTTTCCTTCAGCCACTTTGTGGTAGATCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002976.5
CDS GCA 90 bp CGGGAACACAGGATGATGATTTTGGAGTTGCTCTCCACCATCTCCTaGTTCTGTCGGCTCACCCAGGTCATGACCCCCACCTCAGAGATA +
Preference number: 5 (lower is better)
Translates to: REHRMMILELLSTIS*FCRLTQVMTPTSEI
Trigger: TATCTCTGAGGTGGGGGTCATGACCTGGGTGAGCCGACAGAAGCAGGAGATGGTGGAGAGCAACTCCAAAATCATCATCCTGTGTTCCCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000002976.5
CDS CCA 90 bp GCTGTCCTCACAGTCAGGCACAAAGATGATCTTGGATTTGTGGTTTaGGTCCCCATCAGGGATGGGCTTCGGCAGGTGGTGAACAGTCAC +
Preference number: 5 (lower is better)
Translates to: AVLTVRHKDDLGFVV*VPIRDGLRQVVNSH
Trigger: GTGACTGTTCACCACCTGCCGAAGCCCATCCCTGATGGGGACCCAAACCACAAATCCAAGATCATCTTTGTGCCTGACTGTGAGGACAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002976.5
CDS CCA 90 bp CAGGTCCTGGATCCGGAAGTAAACCTCCTCAAATCTGTCCATGAGTaGGTACCTGGAGGTGATGTTGAAGAGGTCGGGGACATCCCTCTC +
Preference number: 5 (lower is better)
Translates to: QVLDPEVNLLKSVHE*VPGGDVEEVGDIPL
Trigger: GAGAGGGATGTCCCCGACCTCTTCAACATCACCTCCAGGTACCCACTCATGGACAGATTTGAGGAGGTTTACTTCCGGATCCAGGACCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002976.5
CDS TCA 90 bp GAACAGTCACTTCATACTCCTGGCCAGGATCTACCACAAAGTGGCTaGAGGAAAACCGCCACCGCTTACGGTGATGCTGCAGCATGGACA +
Preference number: 5 (lower is better)
Translates to: EQSLHTPGQDLPQSG*RKTATAYGDAAAWT
Trigger: TGTCCATGCTGCAGCATCACCGTAAGCGGTGGCGGTTTTCCTTCAGCCACTTTGTGGTAGATCCTGGCCAGGAGTATGAAGTGACTGTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002976.5
CDS CCA 90 bp TGGACAGCAGGCTCAGCCCAACCCAAGATAGCTTTCCACTTTGCTTaGGTGCCTCGGGAACACAGGATGATGATTTTGGAGTTGCTCTCC +
Preference number: 5 (lower is better)
Translates to: WTAGSAQPKIAFHFA*VPREHRMMILELLS
Trigger: GGAGAGCAACTCCAAAATCATCATCCTGTGTTCCCGAGGCACCCAAGCAAAGTGGAAAGCTATCTTGGGTTGGGCTGAGCCTGCTGTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002976.5
CDS TCA 90 bp CCACAGGGGAATGTAGTCTGCAACTGGCTTGGGAACTGTGGTATTTaGGATTACTGGGCAGGGCACAGTCACAGCGTGTCTCAAACAGTC +
Preference number: 5 (lower is better)
Translates to: PQGNVVCNWLGNCGI*DYWAGHSHSVSQTV
Trigger: GACTGTTTGAGACACGCTGTGACTGTGCCCTGCCCAGTAATCTCAAATACCACAGTTCCCAAGCCAGTTGCAGACTACATTCCCCTGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002976.5
CDS GCA 90 bp TCGAGGTACAGGATGCTGGCATCTGTCTGCAGGGTCCACTCAACATaGAACACAGGGACTAATTCTCCGTGCTGGGTAGAGGAAACACTA +
Preference number: 5 (lower is better)
Translates to: SRYRMLASVCRVHST*NTGTNSPCWVEETL
Trigger: TAGTGTTTCCTCTACCCAGCACGGAGAATTAGTCCCTGTGTTGCATGTTGAGTGGACCCTGCAGACAGATGCCAGCATCCTGTACCTCGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002976.5
CDS CCA 90 bp ACAGATGCCACTGAAGTAGCAAACAACGTAGGTGCCGAAGCAGGCTaGCCTCTTGAAGTCTGGCAGGATCATGTTCATGGCTGCAGTGAA +
Preference number: 5 (lower is better)
Translates to: TDATEVANNVGAEAG*PLEVWQDHVHGCSE
Trigger: TTCACTGCAGCCATGAACATGATCCTGCCAGACTTCAAGAGGCCAGCCTGCTTCGGCACCTACGTTGTTTGCTACTTCAGTGGCATCTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002976.5
CDS CCA 90 bp GAGAGCATTAGGCTTTCTAGCTGCTCTCTTGCATCGCCTTGGAGGTaGTCAGGTGACATCATTGGGGTGCTACAGAGTGGCAAGTCATCT +
Preference number: 5 (lower is better)
Translates to: ESIRLSSCSLASPWR*SGDIIGVLQSGKSS
Trigger: AGATGACTTGCCACTCTGTAGCACCCCAATGATGTCACCTGACCACCTCCAAGGCGATGCAAGAGAGCAGCTAGAAAGCCTAATGCTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002976.5
CDS-3UTR CAA 90 bp GCTCAAGACAGGAGAGTGCACTCAGGAGTTTGCCTAGAGATGCAGGGAAATGCCAGACAAGTACTATTCTaGACTCTGCAGCTCAGCCCC +
Preference number: 5 (lower is better)
Translates to: AQDRRVHSGVCLEMQGNARQVLF*TLQLSP
Trigger: GGGGCTGAGCTGCAGAGTCAAGAATAGTACTTGTCT...GGCATTTCCCTGCATCTCTAGGCAAACTCCTGAGTGCACTCTCCTGTCTTGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002976.5
CDS-3UTR CAA 90 bp GAGGTAGGAACTAATGTGGTGCCCTTTTTAGAGAGAGCAACCTGGAGCCTGGGATCTTGGATTTGTGGTTaGGGTCCCCATCAGGGATGG +
Preference number: 5 (lower is better)
Translates to: EVGTNVVPFLERATWSLGSWICG*GPHQGW
Trigger: CCATCCCTGATGGGGACCCAAACCACAAATCCAAGA...TCCCAGGCTCCAGGTTGCTCTCTCTAAAAAGGGCACCACATTAGTTCCTACCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000002976.5
CDS-3UTR CAA 90 bp CAGTGTCATGTGTGTGTGCCAGCCATGAAATCTGTGTTGAGATCAGACTCTCTCGTCTCCACAGTGATGTaGGGATCCCAAAGGCTGCCT +
Preference number: 5 (lower is better)
Translates to: QCHVCVPAMKSVLRSDSLVSTVM*GSQRLP
Trigger: AGGCAGCCTTTGGGATCCCAACATCACTGTGGAGAC...GAGAGAGTCTGATCTCAACACAGATTTCATGGCTGGCACACACACATGACACTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002976.5
CDS-3UTR CAA 90 bp TATGTGCACTGTGTGCATGGGTATGCCTGGTGCCTGAAGAGGCCAAAAGAGCACCACAGGATGATGATTTaGGAGTTGCTCTCCACCATC +
Preference number: 5 (lower is better)
Translates to: YVHCVHGYAWCLKRPKEHHRMMI*ELLSTI
Trigger: GATGGTGGAGAGCAACTCCAAAATCATCATCCTGTG...GTGCTCTTTTGGCCTCTTCAGGCACCAGGCATACCCATGCACACAGTGCACATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002976.5
CDS TCA 90 bp GGGCGCAAATATTTGTTTAACGACATCAAAGCAGCTGTGGTTCTCTaGGTCGGAGAAACTTTCCAGCAGGACCTGGTAGGGGGTGGATTC +
Preference number: 5 (lower is better)
Translates to: GRKYLFNDIKAAVVL*VGETFQQDLVGGGF
Trigger: GAATCCACCCCCTACCAGGTCCTGCTGGAAAGTTTCTCCGACTCAGAGAACCACAGCTGCTTTGATGTCGTTAAACAAATATTTGCGCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000002976.5
CDS-3UTR CAA 90 bp TTCTGGGCTGATGTGGGGCTGATTTGCTGCTGGGAGAACTTACGTTTAAGTTCGGCTGAGGGTCCAGCTTaGCCATTCTACTTTCTTCCT +
Preference number: 5 (lower is better)
Translates to: FWADVGLICCWENLRLSSAEGPA*PFYFLP
Trigger: AGGAAGAAAGTAGAATGGCAAAGCTGGACCCTCAGC...CGAACTTAAACGTAAGTTCTCCCAGCAGCAAATCAGCCCCACATCAGCCCAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002976.5
CDS-3UTR CAA 90 bp GTCACCTCTAATTGTCCCTTACTCTTTCCTTGTTCATCCCCACCACCACACACATGGGAACTGTGGTATTaGAGATTACTGGGCAGGGCA +
Preference number: 5 (lower is better)
Translates to: VTSNCPLLFPCSSPPPHTWELWY*RLLGRA
Trigger: TGCCCTGCCCAGTAATCTCAAATACCACAGTTCCCA...TGTGTGTGGTGGTGGGGATGAACAAGGAAAGAGTAAGGGACAATTAGAGGTGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002976.5
CDS-3UTR CAA 90 bp AGCACAGGATTTCACACGCCTCTTCCTGCTTCTCAAGTTTTACATCACCCATTTAAGCAGGCTGGCCTCTaGAAGTCTGGCAGGATCATG +
Preference number: 5 (lower is better)
Translates to: STGFHTPLPASQVLHHPFKQAGL*KSGRIM
Trigger: CATGATCCTGCCAGACTTCAAGAGGCCAGCCTGCTT...AAATGGGTGATGTAAAACTTGAGAAGCAGGAAGAGGCGTGTGAAATCCTGTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002976.5
CDS-3UTR CAA 90 bp CGCCCTGGAGCTACTTTAAACAACCTCTCTTACTGTAGTTATACAGTGACATACACCAGGGGCTGCTGTTaGACAATTCCTCCCCCTGGT +
Preference number: 5 (lower is better)
Translates to: RPGATLNNLSYCSYTVTYTRGCC*TIPPPG
Trigger: ACCAGGGGGAGGAATTGTCAAACAGCAGCCCCTGGT...GTATGTCACTGTATAACTACAGTAAGAGAGGTTGTTTAAAGTAGCTCCAGGGCG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000002976.5
CDS-3UTR CAA 90 bp GAGGTAGGAACTAATGTGGTGCCCTTTTTAGAGAGAGCAACCTGGAGCCTGGGACCTGGGCGCAAATATTaGTTTAACGACATCAAAGCA +
Preference number: 5 (lower is better)
Translates to: EVGTNVVPFLERATWSLGPGRKY*FNDIKA
Trigger: TGCTTTGATGTCGTTAAACAAATATTTGCGCCCAGG...TCCCAGGCTCCAGGTTGCTCTCTCTAAAAAGGGCACCACATTAGTTCCTACCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000002976.5
CDS-3UTR CAA 90 bp GTCACCTCTAATTGTCCCTTACTCTTTCCTTGTTCATCCCCACCACCACACACAACGGGCAAGATGCCATaGATTTTGGAGTCATCACCA +
Preference number: 5 (lower is better)
Translates to: VTSNCPLLFPCSSPPPHTTGKMP*ILESSP
Trigger: TGGTGATGACTCCAAAATCAATGGCATCTTGCCCGT...TGTGTGTGGTGGTGGGGATGAACAAGGAAAGAGTAAGGGACAATTAGAGGTGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000002976.5
CDS-3UTR CAA 90 bp CAGTGTCATGTGTGTGTGCCAGCCATGAAATCTGTGTTGAGATCAGACTCTCTCAAGATGATCTTGGATTaGTGGTTTGGGTCCCCATCA +
Preference number: 5 (lower is better)
Translates to: QCHVCVPAMKSVLRSDSLKMILD*WFGSPS
Trigger: TGATGGGGACCCAAACCACAAATCCAAGATCATCTT...GAGAGAGTCTGATCTCAACACAGATTTCATGGCTGGCACACACACATGACACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002976.5
CDS-3UTR CAA 90 bp GTGCTGGGACTTCAGGTATACAACACTATGTCAGATTCAGATGTTCACATTTCTGACAGAAACTGGAACTaGACACACAGCCGCTCATTG +
Preference number: 5 (lower is better)
Translates to: VLGLQVYNTMSDSDVHISDRNWN*THSRSL
Trigger: CAATGAGCGGCTGTGTGTCAAGTTCCAGTTTCTGTC...AGAAATGTGAACATCTGAATCTGACATAGTGTTGTATACCTGAAGTCCCAGCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002976.5
CDS GCA 72 bp ACTGCACCGACTGCCGCTGCTCCTCCTCAGAGGGTGTaGAGCCCTCGAGGACCACCTCTGGCCTCGGCCAGC +
Preference number: 6 (lower is better)
Translates to: TAPTAAAPPQRV*SPRGPPLASAS
Trigger: GCTGGCCGAGGCCAGAGGTGGTCCTCGAGGGCTGCACACCCTCTGAGGAGGAGCAGCGGCAGTCGGTGCAGT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002976.5
CDS CCA 72 bp CCCCCAGCAGCGGGCAAGCCTCGCTGTCCTCTGTCATaGGCAGCTGGGCAGCTGCTCCACTGCCGTCTGGGA +
Preference number: 6 (lower is better)
Translates to: PPAAGKPRCPLS*AAGQLLHCRLG
Trigger: TCCCAGACGGCAGTGGAGCAGCTGCCCAGCTGCCCATGACAGAGGACAGCGAGGCTTGCCCGCTGCTGGGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000002976.5
CDS CCA 72 bp CTCCTCAGAGGGTGTGCAGCCCTCGAGGACCACCTCTaGCCTCGGCCAGCTCTCCAGGGGCTGTCCACTCAG +
Preference number: 6 (lower is better)
Translates to: LLRGCAALEDHL*PRPALQGLSTQ
Trigger: CTGAGTGGACAGCCCCTGGAGAGCTGGCCGAGGCCAGAGGTGGTCCTCGAGGGCTGCACACCCTCTGAGGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002976.5
CDS GCA 72 bp AGCCTCGCTGTCCTCTGTCATGGGCAGCTGGGCAGCTaGTCCACTGCCGTCTGGGAGATGGAGAGGCTCCAC +
Preference number: 6 (lower is better)
Translates to: SLAVLCHGQLGS*STAVWEMERLH
Trigger: GTGGAGCCTCTCCATCTCCCAGACGGCAGTGGAGCAGCTGCCCAGCTGCCCATGACAGAGGACAGCGAGGCT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002976.5
CDS TCA 72 bp CCACTGCCGTCTGGGAGATGGAGAGGCTCCACCACATaGGCTGCAGGGACCTGCTCTGCTGGCAGCACCATG +
Preference number: 6 (lower is better)
Translates to: PLPSGRWRGSTT*AAGTCSAGSTM
Trigger: CATGGTGCTGCCAGCAGAGCAGGTCCCTGCAGCTCATGTGGTGGAGCCTCTCCATCTCCCAGACGGCAGTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002976.5
CDS CCA 72 bp TGTCATGGGCAGCTGGGCAGCTGCTCCACTGCCGTCTaGGAGATGGAGAGGCTCCACCACATGAGCTGCAGG +
Preference number: 6 (lower is better)
Translates to: CHGQLGSCSTAV*EMERLHHMSCR
Trigger: CCTGCAGCTCATGTGGTGGAGCCTCTCCATCTCCCAGACGGCAGTGGAGCAGCTGCCCAGCTGCCCATGACA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002976.5
CDS CCA 72 bp TCTGAGTCCACGGGGAGGCAAAGGATGCTGTTCCTCTaGACCCCCAGCAGCGGGCAAGCCTCGCTGTCCTCT +
Preference number: 6 (lower is better)
Translates to: SESTGRQRMLFL*TPSSGQASLSS
Trigger: AGAGGACAGCGAGGCTTGCCCGCTGCTGGGGGTCCAGAGGAACAGCATCCTTTGCCTCCCCGTGGACTCAGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000002976.5
CDS GCA 72 bp AGGCAGCCGTCAGATGGGAGTTCCCGCACCAGGGGCTaGTGTTTGACAATTCCTCCCCCTGGTGGCAGCAGT +
Preference number: 6 (lower is better)
Translates to: RQPSDGSSRTRG*CLTIPPPGGSS
Trigger: ACTGCTGCCACCAGGGGGAGGAATTGTCAAACAGCAGCCCCTGGTGCGGGAACTCCCATCTGACGGCTGCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000002976.5
CDS GCA 72 bp GAGAGGCTCCACCACATGAGCTGCAGGGACCTGCTCTaGTGGCAGCACCATGCTTTGGAGGGTGTGAGCCAC +
Preference number: 6 (lower is better)
Translates to: ERLHHMSCRDLL*WQHHALEGVSH
Trigger: GTGGCTCACACCCTCCAAAGCATGGTGCTGCCAGCAGAGCAGGTCCCTGCAGCTCATGTGGTGGAGCCTCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002976.5
CDS GCA 72 bp GCCGTCTGGGAGATGGAGAGGCTCCACCACATGAGCTaGAGGGACCTGCTCTGCTGGCAGCACCATGCTTTG +
Preference number: 6 (lower is better)
Translates to: AVWEMERLHHMS*RDLLCWQHHAL
Trigger: CAAAGCATGGTGCTGCCAGCAGAGCAGGTCCCTGCAGCTCATGTGGTGGAGCCTCTCCATCTCCCAGACGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002976.5
CDS GCA 72 bp TGTCCTCTGTCATGGGCAGCTGGGCAGCTGCTCCACTaGCGTCTGGGAGATGGAGAGGCTCCACCACATGAG +
Preference number: 6 (lower is better)
Translates to: CPLSWAAGQLLH*RLGDGEAPPHE
Trigger: CTCATGTGGTGGAGCCTCTCCATCTCCCAGACGGCAGTGGAGCAGCTGCCCAGCTGCCCATGACAGAGGACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002976.5
CDS GCA 72 bp GTGGCAAGTCATCTGAGTCCACGGGGAGGCAAAGGATaGTGTTCCTCTGGACCCCCAGCAGCGGGCAAGCCT +
Preference number: 6 (lower is better)
Translates to: VASHLSPRGGKG*CSSGPPAAGKP
Trigger: AGGCTTGCCCGCTGCTGGGGGTCCAGAGGAACAGCATCCTTTGCCTCCCCGTGGACTCAGATGACTTGCCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000002976.5
CDS GCA 72 bp CTCGGCCAGCTCTCCAGGGGCTGTCCACTCAGGCTCTaGTGCAGCACCGAGAGCATTAGGCTTTCTAGCTGC +
Preference number: 6 (lower is better)
Translates to: LGQLSRGCPLRL*CSTESIRLSSC
Trigger: GCAGCTAGAAAGCCTAATGCTCTCGGTGCTGCAGCAGAGCCTGAGTGGACAGCCCCTGGAGAGCTGGCCGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002976.5
CDS GCA 72 bp GGCCAGCTCTCCAGGGGCTGTCCACTCAGGCTCTGCTaGAGCACCGAGAGCATTAGGCTTTCTAGCTGCTCT +
Preference number: 6 (lower is better)
Translates to: GQLSRGCPLRLC*STESIRLSSCS
Trigger: AGAGCAGCTAGAAAGCCTAATGCTCTCGGTGCTGCAGCAGAGCCTGAGTGGACAGCCCCTGGAGAGCTGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002976.5
CDS CCA 72 bp CGAGTAGACGATCCAGACCTTCCTGGGCCTCAGGGGTaGGGGAGTCAGGTCTGCTACGGGCAAGATGCCATT +
Preference number: 6 (lower is better)
Translates to: RVDDPDLPGPQG*GSQVCYGQDAI
Trigger: AATGGCATCTTGCCCGTAGCAGACCTGACTCCCCCACCCCTGAGGCCCAGGAAGGTCTGGATCGTCTACTCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000002976.5
CDS GCA 72 bp AGGTTCTCACGCTCGAACCAGTCGGGGCACTGGGTTTaGCACTCCTGGAACCTAAGCACAGCCTCCTTGAGC +
Preference number: 6 (lower is better)
Translates to: RFSRSNQSGHWV*HSWNLSTASLS
Trigger: GCTCAAGGAGGCTGTGCTTAGGTTCCAGGAGTGGCAAACCCAGTGCCCCGACTGGTTCGAGCGTGAGAACCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002976.5
CDS GCA 72 bp CATGAGCTGCAGGGACCTGCTCTGCTGGCAGCACCATaGTTTGGAGGGTGTGAGCCACTAGCTCTCTCTGTG +
Preference number: 6 (lower is better)
Translates to: HELQGPALLAAP*FGGCEPLALSV
Trigger: CACAGAGAGAGCTAGTGGCTCACACCCTCCAAAGCATGGTGCTGCCAGCAGAGCAGGTCCCTGCAGCTCATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002976.5
CDS CCA 72 bp AGGTCCCCAGCAGGCTTCCAGTGGTCACACCGTAGCTaGACAGCAGGCTCAGCCCAACCCAAGATAGCTTTC +
Preference number: 6 (lower is better)
Translates to: RSPAGFQWSHRS*TAGSAQPKIAF
Trigger: GAAAGCTATCTTGGGTTGGGCTGAGCCTGCTGTCCAGCTACGGTGTGACCACTGGAAGCCTGCTGGGGACCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002976.5
CDS CCA 72 bp ATGGCTGCAGTGAAAAGGTCCCCAGCAGGCTTCCAGTaGTCACACCGTAGCTGGACAGCAGGCTCAGCCCAA +
Preference number: 6 (lower is better)
Translates to: MAAVKRSPAGFQ*SHRSWTAGSAQ
Trigger: TTGGGCTGAGCCTGCTGTCCAGCTACGGTGTGACCACTGGAAGCCTGCTGGGGACCTTTTCACTGCAGCCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000002976.5
CDS CCA 72 bp AAGCAGAGGTTCTCACGCTCGAACCAGTCGGGGCACTaGGTTTGCCACTCCTGGAACCTAAGCACAGCCTCC +
Preference number: 6 (lower is better)
Translates to: KQRFSRSNQSGH*VCHSWNLSTAS
Trigger: GGAGGCTGTGCTTAGGTTCCAGGAGTGGCAAACCCAGTGCCCCGACTGGTTCGAGCGTGAGAACCTCTGCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002976.5
CDS CCA 72 bp CTAGGAGGGATTCTGCTCTTCTGGGGTGGGTCTCCGTaGCTCCAAGCTGTTCCAGCCAGGGTTCTTCTCGAG +
Preference number: 6 (lower is better)
Translates to: LGGILLFWGGSP*LQAVPARVLLE
Trigger: CTCGAGAAGAACCCTGGCTGGAACAGCTTGGAGCCACGGAGACCCACCCCAGAAGAGCAGAATCCCTCCTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002976.5
CDS CAA 72 bp GAGGTTCTCACGCTCGAACCAGTCGGGGCACTGGGTTaGCCACTCCTGGAACCTAAGCACAGCCTCCTTGAG +
Preference number: 6 (lower is better)
Translates to: EVLTLEPVGALG*PLLEPKHSLLE
Trigger: CTCAAGGAGGCTGTGCTTAGGTTCCAGGAGTGGCAAACCCAGTGCCCCGACTGGTTCGAGCGTGAGAACCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002976.5
CDS TCA 72 bp GGTGGATCCAGCTGTCATCCAGACAAGTACTATTCTTaGCTCTGCAGCTCAGCCCCTCCTGCGCGCAGACCG +
Preference number: 6 (lower is better)
Translates to: GGSSCHPDKYYS*LCSSAPPARRP
Trigger: CGGTCTGCGCGCAGGAGGGGCTGAGCTGCAGAGTCAAGAATAGTACTTGTCTGGATGACAGCTGGATCCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002976.5
CDS TCA 72 bp CCACTCGCAGATGCTGTGTGTCCAAGGTCTCCACAGTaGTGTTGGGATCCCAAAGGCTGCCTGAGCTCACGC +
Preference number: 6 (lower is better)
Translates to: PLADAVCPRSPQ*CWDPKGCLSSR
Trigger: GCGTGAGCTCAGGCAGCCTTTGGGATCCCAACATCACTGTGGAGACCTTGGACACACAGCATCTGCGAGTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002976.5
CDS GCA 72 bp TGGAACTTGACACACAGCCGCTCATTGGTGTTCAGCTaGAGGACGGACAGCTCTGCACCCTCGAGGTACAGG +
Preference number: 6 (lower is better)
Translates to: WNLTHSRSLVFS*RTDSSAPSRYR
Trigger: CCTGTACCTCGAGGGTGCAGAGCTGTCCGTCCTGCAGCTGAACACCAATGAGCGGCTGTGTGTCAAGTTCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002976.5
CDS CCA 72 bp GGACGGACAGCTCTGCACCCTCGAGGTACAGGATGCTaGCATCTGTCTGCAGGGTCCACTCAACATGCAACA +
Preference number: 6 (lower is better)
Translates to: GRTALHPRGTGC*HLSAGSTQHAT
Trigger: TGTTGCATGTTGAGTGGACCCTGCAGACAGATGCCAGCATCCTGTACCTCGAGGGTGCAGAGCTGTCCGTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002976.5
CDS CAA 72 bp GGGTGGATCCAGCTGTCATCCAGACAAGTACTATTCTaGACTCTGCAGCTCAGCCCCTCCTGCGCGCAGACC +
Preference number: 6 (lower is better)
Translates to: GWIQLSSRQVLF*TLQLSPSCAQT
Trigger: GGTCTGCGCGCAGGAGGGGCTGAGCTGCAGAGTCAAGAATAGTACTTGTCTGGATGACAGCTGGATCCACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002976.5
CDS CAA 90 bp TGCTGCAGCATGGACAGAAACTGGAACTTGACACACAGCCGCTCATaGGTGTTCAGCTGCAGGACGGACAGCTCTGCACCCTCGAGGTAC +
Preference number: 6 (lower is better)
Translates to: CCSMDRNWNLTHSRS*VFSCRTDSSAPSRY
Trigger: GTACCTCGAGGGTGCAGAGCTGTCCGTCCTGCAGCTGAACACCAATGAGCGGCTGTGTGTCAAGTTCCAGTTTCTGTCCATGCTGCAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002976.5
CDS TCA 72 bp GCAGGACCTGGTAGGGGGTGGATTCATTCCACAGGGTaGAGTCCACTCGCAGATGCTGTGTGTCCAAGGTCT +
Preference number: 6 (lower is better)
Translates to: AGPGRGWIHSTG*SPLADAVCPRS
Trigger: AGACCTTGGACACACAGCATCTGCGAGTGGACTTCACCCTGTGGAATGAATCCACCCCCTACCAGGTCCTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000002976.5
CDS TCA 72 bp CCAGGAGGTCAAGGGCTACTTCAGTGCCACAGGCAGTaGTCAGGAACTGGGCGAACTTTAGGACCACCTCCA +
Preference number: 6 (lower is better)
Translates to: PGGQGLLQCHRQ*SGTGRTLGPPP
Trigger: TGGAGGTGGTCCTAAAGTTCGCCCAGTTCCTGATCACTGCCTGTGGCACTGAAGTAGCCCTTGACCTCCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002976.5
CDS GCA 72 bp CTCACCCAGGTCATGACCCCCACCTCAGAGATAACCTaGTCTTCCAGGAGGTCAAGGGCTACTTCAGTGCCA +
Preference number: 6 (lower is better)
Translates to: LTQVMTPTSEIT*SSRRSRATSVP
Trigger: TGGCACTGAAGTAGCCCTTGACCTCCTGGAAGAGCAGGTTATCTCTGAGGTGGGGGTCATGACCTGGGTGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000002976.5
CDS GCA 72 bp CATCGCCTTGGAGGTGGTCAGGTGACATCATTGGGGTaGTACAGAGTGGCAAGTCATCTGAGTCCACGGGGA +
Preference number: 6 (lower is better)
Translates to: HRLGGGQVTSLG*YRVASHLSPRG
Trigger: TCCCCGTGGACTCAGATGACTTGCCACTCTGTAGCACCCCAATGATGTCACCTGACCACCTCCAAGGCGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000002976.5
CDS GCA 72 bp CAGCCAGGGTTCTTCTCGAGCTCCCAGAAGAAAAGCTaGCTCTGGAGCTTCCTCAGGCTCCGTAGTTCCTCA +
Preference number: 6 (lower is better)
Translates to: QPGFFSSSQKKS*LWSFLRLRSSS
Trigger: TGAGGAACTACGGAGCCTGAGGAAGCTCCAGAGGCAGCTTTTCTTCTGGGAGCTCGAGAAGAACCCTGGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002976.5
CDS TCA 72 bp TCACAGCGTGTCTCAAACAGTCATTTAGGCAGCTGCTaGAGAAGGGCTGGACCTGCACGTGGTGATGGCAGC +
Preference number: 6 (lower is better)
Translates to: SQRVSNSHLGSC*RRAGPARGDGS
Trigger: GCTGCCATCACCACGTGCAGGTCCAGCCCTTCTTCAGCAGCTGCCTAAATGACTGTTTGAGACACGCTGTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002976.5
CDS GCA 72 bp AGGATGATGATTTTGGAGTTGCTCTCCACCATCTCCTaGTTCTGTCGGCTCACCCAGGTCATGACCCCCACC +
Preference number: 6 (lower is better)
Translates to: RMMILELLSTIS*FCRLTQVMTPT
Trigger: GGTGGGGGTCATGACCTGGGTGAGCCGACAGAAGCAGGAGATGGTGGAGAGCAACTCCAAAATCATCATCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000002976.5
CDS CCA 72 bp ACTGACACAGACATCTACCACAAGGCAGCCGTCAGATaGGAGTTCCCGCACCAGGGGCTGCTGTTTGACAAT +
Preference number: 6 (lower is better)
Translates to: TDTDIYHKAAVR*EFPHQGLLFDN
Trigger: ATTGTCAAACAGCAGCCCCTGGTGCGGGAACTCCCATCTGACGGCTGCCTTGTGGTAGATGTCTGTGTCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002976.5
CDS CCA 72 bp AGGCTTTCTAGCTGCTCTCTTGCATCGCCTTGGAGGTaGTCAGGTGACATCATTGGGGTGCTACAGAGTGGC +
Preference number: 6 (lower is better)
Translates to: RLSSCSLASPWR*SGDIIGVLQSG
Trigger: GCCACTCTGTAGCACCCCAATGATGTCACCTGACCACCTCCAAGGCGATGCAAGAGAGCAGCTAGAAAGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002976.5
CDS CAA 72 bp ATGGACAGAAACTGGAACTTGACACACAGCCGCTCATaGGTGTTCAGCTGCAGGACGGACAGCTCTGCACCC +
Preference number: 6 (lower is better)
Translates to: MDRNWNLTHSRS*VFSCRTDSSAP
Trigger: GGGTGCAGAGCTGTCCGTCCTGCAGCTGAACACCAATGAGCGGCTGTGTGTCAAGTTCCAGTTTCTGTCCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002976.5
CDS TCA 72 bp CTTCATACTCCTGGCCAGGATCTACCACAAAGTGGCTaGAGGAAAACCGCCACCGCTTACGGTGATGCTGCA +
Preference number: 6 (lower is better)
Translates to: LHTPGQDLPQSG*RKTATAYGDAA
Trigger: TGCAGCATCACCGTAAGCGGTGGCGGTTTTCCTTCAGCCACTTTGTGGTAGATCCTGGCCAGGAGTATGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002976.5
CDS GCA 72 bp AGGATGCTGGCATCTGTCTGCAGGGTCCACTCAACATaGAACACAGGGACTAATTCTCCGTGCTGGGTAGAG +
Preference number: 6 (lower is better)
Translates to: RMLASVCRVHST*NTGTNSPCWVE
Trigger: CTCTACCCAGCACGGAGAATTAGTCCCTGTGTTGCATGTTGAGTGGACCCTGCAGACAGATGCCAGCATCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002976.5
CDS CCA 72 bp ACAGTCAGGCACAAAGATGATCTTGGATTTGTGGTTTaGGTCCCCATCAGGGATGGGCTTCGGCAGGTGGTG +
Preference number: 6 (lower is better)
Translates to: TVRHKDDLGFVV*VPIRDGLRQVV
Trigger: CACCACCTGCCGAAGCCCATCCCTGATGGGGACCCAAACCACAAATCCAAGATCATCTTTGTGCCTGACTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002976.5
CDS CCA 72 bp TCCTCACAGTCAGGCACAAAGATGATCTTGGATTTGTaGTTTGGGTCCCCATCAGGGATGGGCTTCGGCAGG +
Preference number: 6 (lower is better)
Translates to: SSQSGTKMILDL*FGSPSGMGFGR
Trigger: CCTGCCGAAGCCCATCCCTGATGGGGACCCAAACCACAAATCCAAGATCATCTTTGTGCCTGACTGTGAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002976.5
CDS CCA 72 bp AACGTAGGTGCCGAAGCAGGCTGGCCTCTTGAAGTCTaGCAGGATCATGTTCATGGCTGCAGTGAAAAGGTC +
Preference number: 6 (lower is better)
Translates to: NVGAEAGWPLEV*QDHVHGCSEKV
Trigger: GACCTTTTCACTGCAGCCATGAACATGATCCTGCCAGACTTCAAGAGGCCAGCCTGCTTCGGCACCTACGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002976.5
CDS CAA 72 bp CTGTCCTCACAGTCAGGCACAAAGATGATCTTGGATTaGTGGTTTGGGTCCCCATCAGGGATGGGCTTCGGC +
Preference number: 6 (lower is better)
Translates to: LSSQSGTKMILD*WFGSPSGMGFG
Trigger: GCCGAAGCCCATCCCTGATGGGGACCCAAACCACAAATCCAAGATCATCTTTGTGCCTGACTGTGAGGACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002976.5
CDS CAA 90 bp CTGGACAGCAGGCTCAGCCCAACCCAAGATAGCTTTCCACTTTGCTaGGGTGCCTCGGGAACACAGGATGATGATTTTGGAGTTGCTCTC +
Preference number: 6 (lower is better)
Translates to: LDSRLSPTQDSFPLC*GASGTQDDDFGVAL
Trigger: GAGAGCAACTCCAAAATCATCATCCTGTGTTCCCGAGGCACCCAAGCAAAGTGGAAAGCTATCTTGGGTTGGGCTGAGCCTGCTGTCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002976.5
CDS TCA 72 bp TACGGTGATGCTGCAGCATGGACAGAAACTGGAACTTaGCACACAGCCGCTCATTGGTGTTCAGCTGCAGGA +
Preference number: 6 (lower is better)
Translates to: YGDAAAWTETGT*HTAAHWCSAAG
Trigger: TCCTGCAGCTGAACACCAATGAGCGGCTGTGTGTCAAGTTCCAGTTTCTGTCCATGCTGCAGCATCACCGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002976.5
CDS GCA 72 bp GTGGATTCATTCCACAGGGTGAAGTCCACTCGCAGATaGTGTGTGTCCAAGGTCTCCACAGTGATGTTGGGA +
Preference number: 6 (lower is better)
Translates to: VDSFHRVKSTRR*CVSKVSTVMLG
Trigger: TCCCAACATCACTGTGGAGACCTTGGACACACAGCATCTGCGAGTGGACTTCACCCTGTGGAATGAATCCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002976.5
CDS CCA 72 bp GGCTCAGCCCAACCCAAGATAGCTTTCCACTTTGCTTaGGTGCCTCGGGAACACAGGATGATGATTTTGGAG +
Preference number: 6 (lower is better)
Translates to: GSAQPKIAFHFA*VPREHRMMILE
Trigger: CTCCAAAATCATCATCCTGTGTTCCCGAGGCACCCAAGCAAAGTGGAAAGCTATCTTGGGTTGGGCTGAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002976.5
CDS CCA 72 bp ACTGAAGTAGCAAACAACGTAGGTGCCGAAGCAGGCTaGCCTCTTGAAGTCTGGCAGGATCATGTTCATGGC +
Preference number: 6 (lower is better)
Translates to: TEVANNVGAEAG*PLEVWQDHVHG
Trigger: GCCATGAACATGATCCTGCCAGACTTCAAGAGGCCAGCCTGCTTCGGCACCTACGTTGTTTGCTACTTCAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002976.5
CDS CCA 72 bp GATCCGGAAGTAAACCTCCTCAAATCTGTCCATGAGTaGGTACCTGGAGGTGATGTTGAAGAGGTCGGGGAC +
Preference number: 6 (lower is better)
Translates to: DPEVNLLKSVHE*VPGGDVEEVGD
Trigger: GTCCCCGACCTCTTCAACATCACCTCCAGGTACCCACTCATGGACAGATTTGAGGAGGTTTACTTCCGGATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002976.5
CDS CAA 90 bp GTCATCTTCATCTTGCTGTCCTCACAGTCAGGCACAAAGATGATCTaGGATTTGTGGTTTGGGTCCCCATCAGGGATGGGCTTCGGCAGG +
Preference number: 6 (lower is better)
Translates to: VIFILLSSQSGTKMI*DLWFGSPSGMGFGR
Trigger: CCTGCCGAAGCCCATCCCTGATGGGGACCCAAACCACAAATCCAAGATCATCTTTGTGCCTGACTGTGAGGACAGCAAGATGAAGATGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002976.5
CDS TCA 72 bp ACAAAGTGGCTGAAGGAAAACCGCCACCGCTTACGGTaGTGCTGCAGCATGGACAGAAACTGGAACTTGACA +
Preference number: 6 (lower is better)
Translates to: TKWLKENRHRLR*CCSMDRNWNLT
Trigger: TGTCAAGTTCCAGTTTCTGTCCATGCTGCAGCATCACCGTAAGCGGTGGCGGTTTTCCTTCAGCCACTTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002976.5
CDS CCA 72 bp ACAGGGGAATGTAGTCTGCAACTGGCTTGGGAACTGTaGTATTTGAGATTACTGGGCAGGGCACAGTCACAG +
Preference number: 6 (lower is better)
Translates to: TGECSLQLAWEL*YLRLLGRAQSQ
Trigger: CTGTGACTGTGCCCTGCCCAGTAATCTCAAATACCACAGTTCCCAAGCCAGTTGCAGACTACATTCCCCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002976.5
CDS CCA 72 bp CATACACCCACAGGGGAATGTAGTCTGCAACTGGCTTaGGAACTGTGGTATTTGAGATTACTGGGCAGGGCA +
Preference number: 6 (lower is better)
Translates to: HTPTGECSLQLA*ELWYLRLLGRA
Trigger: TGCCCTGCCCAGTAATCTCAAATACCACAGTTCCCAAGCCAGTTGCAGACTACATTCCCCTGTGGGTGTATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002976.5
CDS CAA 72 bp ATCTTGCTGTCCTCACAGTCAGGCACAAAGATGATCTaGGATTTGTGGTTTGGGTCCCCATCAGGGATGGGC +
Preference number: 6 (lower is better)
Translates to: ILLSSQSGTKMI*DLWFGSPSGMG
Trigger: GCCCATCCCTGATGGGGACCCAAACCACAAATCCAAGATCATCTTTGTGCCTGACTGTGAGGACAGCAAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002976.5
CDS CAA 72 bp AGGCTCAGCCCAACCCAAGATAGCTTTCCACTTTGCTaGGGTGCCTCGGGAACACAGGATGATGATTTTGGA +
Preference number: 6 (lower is better)
Translates to: RLSPTQDSFPLC*GASGTQDDDFG
Trigger: TCCAAAATCATCATCCTGTGTTCCCGAGGCACCCAAGCAAAGTGGAAAGCTATCTTGGGTTGGGCTGAGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002976.5
CDS CAA 72 bp TCAAATCTGTCCATGAGTGGGTACCTGGAGGTGATGTaGAAGAGGTCGGGGACATCCCTCTCACTACAGATG +
Preference number: 6 (lower is better)
Translates to: SNLSMSGYLEVM*KRSGTSLSLQM
Trigger: CATCTGTAGTGAGAGGGATGTCCCCGACCTCTTCAACATCACCTCCAGGTACCCACTCATGGACAGATTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002976.5
CDS TCA 72 bp TCTTCATCTTGCTGTCCTCACAGTCAGGCACAAAGATaGTCTTGGATTTGTGGTTTGGGTCCCCATCAGGGA +
Preference number: 6 (lower is better)
Translates to: SSSCCPHSQAQR*SWICGLGPHQG
Trigger: TCCCTGATGGGGACCCAAACCACAAATCCAAGATCATCTTTGTGCCTGACTGTGAGGACAGCAAGATGAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002976.5
CDS TCA 72 bp TATTTGTTTAACGACATCAAAGCAGCTGTGGTTCTCTaGGTCGGAGAAACTTTCCAGCAGGACCTGGTAGGG +
Preference number: 6 (lower is better)
Translates to: YLFNDIKAAVVL*VGETFQQDLVG
Trigger: CCCTACCAGGTCCTGCTGGAAAGTTTCTCCGACTCAGAGAACCACAGCTGCTTTGATGTCGTTAAACAAATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002976.5
CDS CAA 72 bp AGTGAATGTGACATTAGCTCGCTGATGGAATTCTTCTaGCCTGGGCGCAAATATTTGTTTAACGACATCAAA +
Preference number: 6 (lower is better)
Translates to: SECDISSLMEFF*PGRKYLFNDIK
Trigger: TTTGATGTCGTTAAACAAATATTTGCGCCCAGGCAAGAAGAATTCCATCAGCGAGCTAATGTCACATTCACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002976.5