Pregenerated sensors for IL17D (Mus musculus)
Ensembl gene IDs: ENSMUSG00000050222Ensembl transcript IDs: ENSMUST00000089494.6
Found 41 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR GCA 90 bp | CCCAGATCCGGAGCACTCATTATCACCTTAGTAAGCTTGGGCCACAGGAGAGACAGGGGACCTGATGCATaGAGGAAGCTGGGCCATGGC | + |
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Preference number: 2 (lower is better) Translates to: PRSGALIITLVSLGHRRDRGPDA*RKLGHG Trigger: GCCATGGCCCAGCTTCCTGCATGCATCAGGTCCCCT...GTCTCTCCTGTGGCCCAAGCTTACTAAGGTGATAATGAGTGCTCCGGATCTGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089494.6 |
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| 3UTR-3UTR GCA 90 bp | CCCAGATCCGGAGCACTCATTATCACCTTAGTAAGCTTGGGCCACAGGAGAGACAGGGACAGGGCACAGTaGAGCAGAAGGAAGTTCATC | + |
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Preference number: 2 (lower is better) Translates to: PRSGALIITLVSLGHRRDRDRAQ*SRRKFI Trigger: GATGAACTTCCTTCTGCTGCACTGTGCCCTGTCCCT...GTCTCTCCTGTGGCCCAAGCTTACTAAGGTGATAATGAGTGCTCCGGATCTGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089494.6 |
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| 3UTR-3UTR TCA 90 bp | CTGAGCACTACAATTATGCACTCAAGAATCCTACTAGAGGAAAACGGGATGTGTCAGGGCCAGGGGACCTaGTGCATGCAGGAAGCTGGG | + |
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Preference number: 2 (lower is better) Translates to: LSTTIMHSRILLEENGMCQGQGT*CMQEAG Trigger: CCCAGCTTCCTGCATGCATCAGGTCCCCTGGCCCTG...ACACATCCCGTTTTCCTCTAGTAGGATTCTTGAGTGCATAATTGTAGTGCTCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089494.6 |
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| 3UTR-3UTR CAA 90 bp | AGAGACTCAGGGACAGGGCACAGTGCAGCAGAAGGAAGTTCATCTGAGCACTACTATGTAGCTGTCCTTTaGGAAAAATTAGGCAGCGGC | + |
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Preference number: 3 (lower is better) Translates to: RDSGTGHSAAEGSSSEHYYVAVL*EKLGSG Trigger: GCCGCTGCCTAATTTTTCCAAAAGGACAGCTACATA...GTAGTGCTCAGATGAACTTCCTTCTGCTGCACTGTGCCCTGTCCCTGAGTCTCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000089494.6 |
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| CDS-3UTR CCA 90 bp | TCCCTCCCTCTCCAGGGACCTGGAGACCTTAGGTGCCCAGATCCGGAGCACTCACCGAGCTGCAGCGTGTaGTGGAAGGCGCTGAGCACG | + |
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Preference number: 4 (lower is better) Translates to: SLPLQGPGDLRCPDPEHSPSCSV*WKALST Trigger: CGTGCTCAGCGCCTTCCACCACACGCTGCAGCTCGG...TGAGTGCTCCGGATCTGGGCACCTAAGGTCTCCAGGTCCCTGGAGAGGGAGGGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089494.6 |
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| CDS-3UTR GCA 90 bp | CCTCTCCAGGGACCTGGAGACCTTAGGTGCCCAGATCCGGAGCACTCATTATCACCCAGGGCGACACGCTaGGCAGGTTGGTGGGTGGCC | + |
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Preference number: 4 (lower is better) Translates to: PLQGPGDLRCPDPEHSLSPRATR*AGWWVA Trigger: GGCCACCCACCAACCTGCGCAGCGTGTCGCCCTGGG...TGATAATGAGTGCTCCGGATCTGGGCACCTAAGGTCTCCAGGTCCCTGGAGAGG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089494.6 |
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| CDS-3UTR GCA 90 bp | TCCGGAGCACTCATTATCACCTTAGTAAGCTTGGGCCACAGGAGAGACTCAGGGTCGCGCGGCCCGAGCTaGAGCGTGTGGTGGAAGGCG | + |
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Preference number: 4 (lower is better) Translates to: SGALIITLVSLGHRRDSGSRGPS*SVWWKA Trigger: CGCCTTCCACCACACGCTGCAGCTCGGGCCGCGCGA...CCCTGAGTCTCTCCTGTGGCCCAAGCTTACTAAGGTGATAATGAGTGCTCCGGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089494.6 |
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| CDS-3UTR GCA 90 bp | TCCCTCCCTCTCCAGGGACCTGGAGACCTTAGGTGCCCAGATCCGGAGCACTCAGCAGCAGCTTGTCCATaGTGGAGTTCGCACTGTCCG | + |
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Preference number: 4 (lower is better) Translates to: SLPLQGPGDLRCPDPEHSAAACP*WSSHCP Trigger: CGGACAGTGCGAACTCCAGCATGGACAAGCTGCTGC...TGAGTGCTCCGGATCTGGGCACCTAAGGTCTCCAGGTCCCTGGAGAGGGAGGGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089494.6 |
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| CDS-3UTR CCA 90 bp | AGAGACTCAGGGACAGGGCACAGTGCAGCAGAAGGAAGTTCATCTGAGCACTACCGCTGCGCAGGTTGGTaGGTGGCCGGAAGCGGCGGT | + |
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Preference number: 4 (lower is better) Translates to: RDSGTGHSAAEGSSSEHYRCAGW*VAGSGG Trigger: ACCGCCGCTTCCGGCCACCCACCAACCTGCGCAGCG...GTAGTGCTCAGATGAACTTCCTTCTGCTGCACTGTGCCCTGTCCCTGAGTCTCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089494.6 |
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| CDS-3UTR GCA 90 bp | CCCAGATCCGGAGCACTCATTATCACCTTAGTAAGCTTGGGCCACAGGAGAGACAGCCGCCCGTACAGCTaGTCCAGGAGCTCCTCCGGC | + |
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Preference number: 4 (lower is better) Translates to: PRSGALIITLVSLGHRRDSRPYS*SRSSSG Trigger: GCCGGAGGAGCTCCTGGAGCAGCTGTACGGGCGGCT...GTCTCTCCTGTGGCCCAAGCTTACTAAGGTGATAATGAGTGCTCCGGATCTGGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089494.6 |
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| CDS-3UTR CCA 90 bp | CAGGGACAGGGCACAGTGCAGCAGAAGGAAGTTCATCTGAGCACTACAATTATGACACGCTGCGCAGGTTaGTGGGTGGCCGGAAGCGGC | + |
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Preference number: 4 (lower is better) Translates to: QGQGTVQQKEVHLSTTIMTRCAG*WVAGSG Trigger: GCCGCTTCCGGCCACCCACCAACCTGCGCAGCGTGT...CATAATTGTAGTGCTCAGATGAACTTCCTTCTGCTGCACTGTGCCCTGTCCCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089494.6 |
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| CDS-3UTR TCA 90 bp | CTGAGCACTACAATTATGCACTCAAGAATCCTACTAGAGGAAAACGGGATGTGTTGTGGTGGAAGGCGCTaGGCACGCCGGCCGCCAGCC | + |
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Preference number: 4 (lower is better) Translates to: LSTTIMHSRILLEENGMCCGGRR*ARRPPA Trigger: GGCTGGCGGCCGGCGTGCTCAGCGCCTTCCACCACA...ACACATCCCGTTTTCCTCTAGTAGGATTCTTGAGTGCATAATTGTAGTGCTCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089494.6 |
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| CDS-3UTR GCA 90 bp | AGAGACTCAGGGACAGGGCACAGTGCAGCAGAAGGAAGTTCATCTGAGCACTACAGAAGACGGGTGTGCTaGGAAAGCGGAAGTCCTCCT | + |
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Preference number: 4 (lower is better) Translates to: RDSGTGHSAAEGSSSEHYRRRVC*ESGSPP Trigger: AGGAGGACTTCCGCTTTCGCAGCACACCCGTCTTCT...GTAGTGCTCAGATGAACTTCCTTCTGCTGCACTGTGCCCTGTCCCTGAGTCTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089494.6 |
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| CDS-3UTR CCA 90 bp | CAGCAGAAGGAAGTTCATCTGAGCACTACAATTATGCACTCAAGAATCCTACTAGCGCAGGTTGGTGGGTaGCCGGAAGCGGCGGTCGGC | + |
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Preference number: 4 (lower is better) Translates to: QQKEVHLSTTIMHSRILLAQVGG*PEAAVG Trigger: GCCGACCGCCGCTTCCGGCCACCCACCAACCTGCGC...TAGTAGGATTCTTGAGTGCATAATTGTAGTGCTCAGATGAACTTCCTTCTGCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089494.6 |
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| CDS-3UTR CCA 90 bp | CTGAGCACTACAATTATGCACTCAAGAATCCTACTAGAGGAAAACGGGATGTGTAGCTGCAGCGTGTGGTaGAAGGCGCTGAGCACGCCG | + |
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Preference number: 4 (lower is better) Translates to: LSTTIMHSRILLEENGMCSCSVW*KALSTP Trigger: CGGCGTGCTCAGCGCCTTCCACCACACGCTGCAGCT...ACACATCCCGTTTTCCTCTAGTAGGATTCTTGAGTGCATAATTGTAGTGCTCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089494.6 |
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| CDS-3UTR CCA 90 bp | ACAGTGCAGCAGAAGGAAGTTCATCTGAGCACTACAATTATGCACTCAAGAATCCCGCAGCACCACGGCTaGAGAGAAGACGGGTGTGCT | + |
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Preference number: 4 (lower is better) Translates to: TVQQKEVHLSTTIMHSRIPQHHG*REDGCA Trigger: AGCACACCCGTCTTCTCTCCAGCCGTGGTGCTGCGG...GATTCTTGAGTGCATAATTGTAGTGCTCAGATGAACTTCCTTCTGCTGCACTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089494.6 |
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| CDS-3UTR TCA 90 bp | ACAGTGCAGCAGAAGGAAGTTCATCTGAGCACTACAATTATGCACTCAAGAATCAGCCCACCGGGATGGTaGTGTAGTGTTCGGCGTACA | + |
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Preference number: 4 (lower is better) Translates to: TVQQKEVHLSTTIMHSRISPPGW*CSVRRT Trigger: TGTACGCCGAACACTACATCACCATCCCGGTGGGCT...GATTCTTGAGTGCATAATTGTAGTGCTCAGATGAACTTCCTTCTGCTGCACTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089494.6 |
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| CDS GCA 90 bp | CCGGCCGGGCAGCTGGCATTGCGCGCCTGCTCGCGCGGCCCGAGCTaGAGCGTGTGGTGGAAGGCGCTGAGCACGCCGGCCGCCAGCCGC | + |
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Preference number: 5 (lower is better) Translates to: PAGQLALRACSRGPS*SVWWKALSTPAASR Trigger: GCGGCTGGCGGCCGGCGTGCTCAGCGCCTTCCACCACACGCTGCAGCTCGGGCCGCGCGAGCAGGCGCGCAATGCCAGCTGCCCGGCCGG 79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089494.6 |
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| CDS GCA 90 bp | GGAAGCGGCGGTCGGCGGCCCTGCCCCCGGCCGGGCAGCTGGCATTaGGCGCCTGCTCGCGCGGCCCGAGCTGCAGCGTGTGGTGGAAGG | + |
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Preference number: 5 (lower is better) Translates to: GSGGRRPCPRPGSWH*APARAARAAACGGR Trigger: CCTTCCACCACACGCTGCAGCTCGGGCCGCGCGAGCAGGCGCGCAATGCCAGCTGCCCGGCCGGGGGCAGGGCCGCCGACCGCCGCTTCC 79% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000089494.6 |
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| CDS CCA 90 bp | CTGGCATTGCGCGCCTGCTCGCGCGGCCCGAGCTGCAGCGTGTGGTaGAAGGCGCTGAGCACGCCGGCCGCCAGCCGCCCGTACAGCTGC | + |
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Preference number: 5 (lower is better) Translates to: LALRACSRGPSCSVW*KALSTPAASRPYSC Trigger: GCAGCTGTACGGGCGGCTGGCGGCCGGCGTGCTCAGCGCCTTCCACCACACGCTGCAGCTCGGGCCGCGCGAGCAGGCGCGCAATGCCAG 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089494.6 |
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| CDS CCA 90 bp | CAGCTGGCATTGCGCGCCTGCTCGCGCGGCCCGAGCTGCAGCGTGTaGTGGAAGGCGCTGAGCACGCCGGCCGCCAGCCGCCCGTACAGC | + |
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Preference number: 5 (lower is better) Translates to: QLALRACSRGPSCSV*WKALSTPAASRPYS Trigger: GCTGTACGGGCGGCTGGCGGCCGGCGTGCTCAGCGCCTTCCACCACACGCTGCAGCTCGGGCCGCGCGAGCAGGCGCGCAATGCCAGCTG 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089494.6 |
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| CDS GCA 90 bp | AGCGCCCCGCAGGCCTGTCGGCGGGCCCCAGCAGCAGCTTGTCCATaGTGGAGTTCGCACTGTCCGCGGACTTGTCCGGCTCGGGCACGC | + |
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Preference number: 5 (lower is better) Translates to: SAPQACRRAPAAACP*WSSHCPRTCPARAR Trigger: GCGTGCCCGAGCCGGACAAGTCCGCGGACAGTGCGAACTCCAGCATGGACAAGCTGCTGCTGGGGCCCGCCGACAGGCCTGCGGGGCGCT 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089494.6 |
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| CDS CCA 90 bp | AGAGCGGCCGCCCGCGCAGGCCGCTGTGCGCCGCAGCACCACGGCTaGAGAGAAGACGGGTGTGCTGCGAAAGCGGAAGTCCTCCTCCCC | + |
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Preference number: 5 (lower is better) Translates to: RAAARAGRCAPQHHG*REDGCAAKAEVLLP Trigger: GGGGAGGAGGACTTCCGCTTTCGCAGCACACCCGTCTTCTCTCCAGCCGTGGTGCTGCGGCGCACAGCGGCCTGCGCGGGCGGCCGCTCT 72% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089494.6 |
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| CDS CCA 90 bp | GCCCCGCAGGCCTGTCGGCGGGCCCCAGCAGCAGCTTGTCCATGCTaGAGTTCGCACTGTCCGCGGACTTGTCCGGCTCGGGCACGCAGG | + |
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Preference number: 5 (lower is better) Translates to: APQACRRAPAAACPC*SSHCPRTCPARARR Trigger: CCTGCGTGCCCGAGCCGGACAAGTCCGCGGACAGTGCGAACTCCAGCATGGACAAGCTGCTGCTGGGGCCCGCCGACAGGCCTGCGGGGC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089494.6 |
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| CDS TCA 90 bp | CGGACTTGTCCGGCTCGGGCACGCAGGTGCAGCCCACCGGGATGGTaGTGTAGTGTTCGGCGTACACAGAGCGGCCGCCCGCGCAGGCCG | + |
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Preference number: 5 (lower is better) Translates to: RTCPARARRCSPPGW*CSVRRTQSGRPRRP Trigger: CGGCCTGCGCGGGCGGCCGCTCTGTGTACGCCGAACACTACATCACCATCCCGGTGGGCTGCACCTGCGTGCCCGAGCCGGACAAGTCCG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089494.6 |
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| CDS GCA 90 bp | AGCGAGCAGGGTCGTAGGAAATCCTGTACGCCCAGGGCGACACGCTaGGCAGGTTGGTGGGTGGCCGGAAGCGGCGGTCGGCGGCCCTGC | + |
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Preference number: 5 (lower is better) Translates to: SEQGRRKSCTPRATR*AGWWVAGSGGRRPC Trigger: GCAGGGCCGCCGACCGCCGCTTCCGGCCACCCACCAACCTGCGCAGCGTGTCGCCCTGGGCGTACAGGATTTCCTACGACCCTGCTCGCT 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089494.6 |
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| CDS GCA 90 bp | CCGCTGTGCGCCGCAGCACCACGGCTGGAGAGAAGACGGGTGTGCTaGGAAAGCGGAAGTCCTCCTCCCCGTAGAGCCCGGTCAGGCAGC | + |
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Preference number: 5 (lower is better) Translates to: PLCAAAPRLERRRVC*ESGSPPPRRARSGS Trigger: GCTGCCTGACCGGGCTCTACGGGGAGGAGGACTTCCGCTTTCGCAGCACACCCGTCTTCTCTCCAGCCGTGGTGCTGCGGCGCACAGCGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089494.6 |
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| CDS GCA 90 bp | AGGCCGCTGTGCGCCGCAGCACCACGGCTGGAGAGAAGACGGGTGTaGTGCGAAAGCGGAAGTCCTCCTCCCCGTAGAGCCCGGTCAGGC | + |
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Preference number: 5 (lower is better) Translates to: RPLCAAAPRLERRRV*CESGSPPPRRARSG Trigger: GCCTGACCGGGCTCTACGGGGAGGAGGACTTCCGCTTTCGCAGCACACCCGTCTTCTCTCCAGCCGTGGTGCTGCGGCGCACAGCGGCCT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089494.6 |
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| CDS GCA 90 bp | TGTAGTGTTCGGCGTACACAGAGCGGCCGCCCGCGCAGGCCGCTGTaGGCCGCAGCACCACGGCTGGAGAGAAGACGGGTGTGCTGCGAA | + |
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Preference number: 5 (lower is better) Translates to: CSVRRTQSGRPRRPL*AAAPRLERRRVCCE Trigger: TTCGCAGCACACCCGTCTTCTCTCCAGCCGTGGTGCTGCGGCGCACAGCGGCCTGCGCGGGCGGCCGCTCTGTGTACGCCGAACACTACA 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089494.6 |
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| CDS GCA 72 bp | GCGCTGAGCACGCCGGCCGCCAGCCGCCCGTACAGCTaGTCCAGGAGCTCCTCCGGCCGGTCCGCGCAGTCC | + |
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Preference number: 6 (lower is better) Translates to: ALSTPAASRPYS*SRSSSGRSAQS Trigger: GGACTGCGCGGACCGGCCGGAGGAGCTCCTGGAGCAGCTGTACGGGCGGCTGGCGGCCGGCGTGCTCAGCGC 78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089494.6 |
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| CDS GCA 72 bp | GCCCTGCCCCCGGCCGGGCAGCTGGCATTGCGCGCCTaGTCGCGCGGCCCGAGCTGCAGCGTGTGGTGGAAG | + |
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Preference number: 6 (lower is better) Translates to: ALPPAGQLALRA*SRGPSCSVWWK Trigger: CTTCCACCACACGCTGCAGCTCGGGCCGCGCGAGCAGGCGCGCAATGCCAGCTGCCCGGCCGGGGGCAGGGC 78% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000089494.6 |
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| CDS CCA 72 bp | TTGCGCGCCTGCTCGCGCGGCCCGAGCTGCAGCGTGTaGTGGAAGGCGCTGAGCACGCCGGCCGCCAGCCGC | + |
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Preference number: 6 (lower is better) Translates to: LRACSRGPSCSV*WKALSTPAASR Trigger: GCGGCTGGCGGCCGGCGTGCTCAGCGCCTTCCACCACACGCTGCAGCTCGGGCCGCGCGAGCAGGCGCGCAA 78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089494.6 |
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| CDS CCA 72 bp | TCCTGTACGCCCAGGGCGACACGCTGCGCAGGTTGGTaGGTGGCCGGAAGCGGCGGTCGGCGGCCCTGCCCC | + |
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Preference number: 6 (lower is better) Translates to: SCTPRATRCAGW*VAGSGGRRPCP Trigger: GGGGCAGGGCCGCCGACCGCCGCTTCCGGCCACCCACCAACCTGCGCAGCGTGTCGCCCTGGGCGTACAGGA 76% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089494.6 |
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| CDS GCA 72 bp | CAGCTGGCATTGCGCGCCTGCTCGCGCGGCCCGAGCTaGAGCGTGTGGTGGAAGGCGCTGAGCACGCCGGCC | + |
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Preference number: 6 (lower is better) Translates to: QLALRACSRGPS*SVWWKALSTPA Trigger: GGCCGGCGTGCTCAGCGCCTTCCACCACACGCTGCAGCTCGGGCCGCGCGAGCAGGCGCGCAATGCCAGCTG 75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089494.6 |
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| CDS GCA 72 bp | CGGCGTACACAGAGCGGCCGCCCGCGCAGGCCGCTGTaGGCCGCAGCACCACGGCTGGAGAGAAGACGGGTG | + |
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Preference number: 6 (lower is better) Translates to: RRTQSGRPRRPL*AAAPRLERRRV Trigger: CACCCGTCTTCTCTCCAGCCGTGGTGCTGCGGCGCACAGCGGCCTGCGCGGGCGGCCGCTCTGTGTACGCCG 75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089494.6 |
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| CDS CCA 72 bp | AAATCCTGTACGCCCAGGGCGACACGCTGCGCAGGTTaGTGGGTGGCCGGAAGCGGCGGTCGGCGGCCCTGC | + |
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Preference number: 6 (lower is better) Translates to: KSCTPRATRCAG*WVAGSGGRRPC Trigger: GCAGGGCCGCCGACCGCCGCTTCCGGCCACCCACCAACCTGCGCAGCGTGTCGCCCTGGGCGTACAGGATTT 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089494.6 |
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| CDS TCA 72 bp | CCGGCTCGGGCACGCAGGTGCAGCCCACCGGGATGGTaGTGTAGTGTTCGGCGTACACAGAGCGGCCGCCCG | + |
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Preference number: 6 (lower is better) Translates to: PARARRCSPPGW*CSVRRTQSGRP Trigger: CGGGCGGCCGCTCTGTGTACGCCGAACACTACATCACCATCCCGGTGGGCTGCACCTGCGTGCCCGAGCCGG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089494.6 |
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| CDS CCA 72 bp | GCCCGCGCAGGCCGCTGTGCGCCGCAGCACCACGGCTaGAGAGAAGACGGGTGTGCTGCGAAAGCGGAAGTC | + |
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Preference number: 6 (lower is better) Translates to: ARAGRCAPQHHG*REDGCAAKAEV Trigger: GACTTCCGCTTTCGCAGCACACCCGTCTTCTCTCCAGCCGTGGTGCTGCGGCGCACAGCGGCCTGCGCGGGC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089494.6 |
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| CDS GCA 72 bp | GGTCGTAGGAAATCCTGTACGCCCAGGGCGACACGCTaGGCAGGTTGGTGGGTGGCCGGAAGCGGCGGTCGG | + |
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Preference number: 6 (lower is better) Translates to: GRRKSCTPRATR*AGWWVAGSGGR Trigger: CCGACCGCCGCTTCCGGCCACCCACCAACCTGCGCAGCGTGTCGCCCTGGGCGTACAGGATTTCCTACGACC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089494.6 |
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| CDS CCA 72 bp | GCCTGTCGGCGGGCCCCAGCAGCAGCTTGTCCATGCTaGAGTTCGCACTGTCCGCGGACTTGTCCGGCTCGG | + |
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Preference number: 6 (lower is better) Translates to: ACRRAPAAACPC*SSHCPRTCPAR Trigger: CCGAGCCGGACAAGTCCGCGGACAGTGCGAACTCCAGCATGGACAAGCTGCTGCTGGGGCCCGCCGACAGGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089494.6 |
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| CDS GCA 72 bp | CAGGCCTGTCGGCGGGCCCCAGCAGCAGCTTGTCCATaGTGGAGTTCGCACTGTCCGCGGACTTGTCCGGCT | + |
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Preference number: 6 (lower is better) Translates to: QACRRAPAAACP*WSSHCPRTCPA Trigger: AGCCGGACAAGTCCGCGGACAGTGCGAACTCCAGCATGGACAAGCTGCTGCTGGGGCCCGCCGACAGGCCTG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089494.6 |
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