RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for IL17C (Mus musculus)

Ensembl gene IDs: ENSMUSG00000046108

Ensembl transcript IDs: ENSMUST00000050963.4

Found 32 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS-3UTR CCA 90 bp TGGAGGTGCCTGGAATGTCTGTCCTGGAAGGATTGTGATGCGCCACAGTGGGGCCCGTGGCCTCCAAACTaGCCACCAGGGCCACAGGGA +
Preference number: 4 (lower is better)
Translates to: WRCLECLSWKDCDAPQWGPWPPN*PPGPQG
Trigger: TCCCTGTGGCCCTGGTGGCCAGTTTGGAGGCCACGG...GCCCCACTGTGGCGCATCACAATCCTTCCAGGACAGACATTCCAGGCACCTCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000050963.4
CDS-3UTR TCA 90 bp GGTGCCTGGAATGTCTGTCCTGGAAGGATTGTGATGCGCCACAGTGGGGCCACGGAGATGGAGCGCTCGTaGGTGTCAGCTTCCAGCACC +
Preference number: 4 (lower is better)
Translates to: GAWNVCPGRIVMRHSGATEMERS*VSASST
Trigger: GGTGCTGGAAGCTGACACTCACGAGCGCTCCATCTC...CGTGGCCCCACTGTGGCGCATCACAATCCTTCCAGGACAGACATTCCAGGCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000050963.4
CDS-3UTR TCA 90 bp TGGAGGTGCCTGGAATGTCTGTCCTGGAAGGATTGTGATGCGCCACAGTGGGGCCGACAGGCACGCGGATaGACTCGGTGTGGAAGGCGA +
Preference number: 4 (lower is better)
Translates to: WRCLECLSWKDCDAPQWGRQARG*TRCGRR
Trigger: TCGCCTTCCACACCGAGTTCATCCGCGTGCCTGTCG...GCCCCACTGTGGCGCATCACAATCCTTCCAGGACAGACATTCCAGGCACCTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000050963.4
CDS-3UTR GCA 90 bp GGTGCCTGGAATGTCTGTCCTGGAAGGATTGTGATGCGCCACAGTGGGGCCACGAGGCTCTGCAGCAGCTaGACCGAGTTCAGGGCAGCT +
Preference number: 4 (lower is better)
Translates to: GAWNVCPGRIVMRHSGATRLCSS*TEFRAA
Trigger: AGCTGCCCTGAACTCGGTGCAGCTGCTGCAGAGCCT...CGTGGCCCCACTGTGGCGCATCACAATCCTTCCAGGACAGACATTCCAGGCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000050963.4
CDS-3UTR CCA 90 bp GGTGCCTGGAATGTCTGTCCTGGAAGGATTGTGATGCGCCACAGTGGGGCCACGGGGCCTGCTCCCACCTaGCACTTCGAGTTAGCAGGT +
Preference number: 4 (lower is better)
Translates to: GAWNVCPGRIVMRHSGATGPAPT*HFELAG
Trigger: ACCTGCTAACTCGAAGTGCCAGGTGGGAGCAGGCCC...CGTGGCCCCACTGTGGCGCATCACAATCCTTCCAGGACAGACATTCCAGGCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000050963.4
CDS-3UTR GCA 90 bp GGTGCCTGGAATGTCTGTCCTGGAAGGATTGTGATGCGCCACAGTGGGGCCACGAGTACCAGCAGGCTCTaGAGCAGCTGCACCGAGTTC +
Preference number: 4 (lower is better)
Translates to: GAWNVCPGRIVMRHSGATSTSRL*SSCTEF
Trigger: GAACTCGGTGCAGCTGCTGCAGAGCCTGCTGGTACT...CGTGGCCCCACTGTGGCGCATCACAATCCTTCCAGGACAGACATTCCAGGCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000050963.4
CDS-3UTR TCA 90 bp GGAGGTGCCTGGAATGTCTGTCCTGGAAGGATTGTGATGCGCCACAGTGGGGCCGCGATATCTCCATGGTaGGATGGAGCGCTCGTGAGT +
Preference number: 4 (lower is better)
Translates to: GGAWNVCPGRIVMRHSGAAISPW*DGALVS
Trigger: ACTCACGAGCGCTCCATCTCACCATGGAGATATCGC...GGCCCCACTGTGGCGCATCACAATCCTTCCAGGACAGACATTCCAGGCACCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000050963.4
CDS-3UTR CCA 90 bp AGGTGCCTGGAATGTCTGTCCTGGAAGGATTGTGATGCGCCACAGTGGGGCCACCACCGCCAGCTTCTGTaGGTAGCGGTTCTCATCTGT +
Preference number: 4 (lower is better)
Translates to: RCLECLSWKDCDAPQWGHHRQLL*VAVLIC
Trigger: ACAGATGAGAACCGCTACCCACAGAAGCTGGCGGTG...GTGGCCCCACTGTGGCGCATCACAATCCTTCCAGGACAGACATTCCAGGCACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000050963.4
CDS-3UTR CCA 90 bp TGGAGGTGCCTGGAATGTCTGTCCTGGAAGGATTGTGATGCGCCACAGTGGGGCCGGATGAACTCGGTGTaGAAGGCGAAGGATCCTGGT +
Preference number: 4 (lower is better)
Translates to: WRCLECLSWKDCDAPQWGRMNSV*KAKDPG
Trigger: ACCAGGATCCTTCGCCTTCCACACCGAGTTCATCCG...GCCCCACTGTGGCGCATCACAATCCTTCCAGGACAGACATTCCAGGCACCTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000050963.4
CDS-3UTR GCA 90 bp TGTGGAGGTGCCTGGAATGTCTGTCCTGGAAGGATTGTGATGCGCCACAGTGGGACGACACAAGCATTCTaGCACCGCCAGCTTCTGTGG +
Preference number: 4 (lower is better)
Translates to: CGGAWNVCPGRIVMRHSGTTQAF*HRQLLW
Trigger: CCACAGAAGCTGGCGGTGGCAGAATGCTTGTGTCGT...CCCACTGTGGCGCATCACAATCCTTCCAGGACAGACATTCCAGGCACCTCCACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000050963.4
CDS CCA 90 bp GCCGACAGGCACGCGGATGAACTCGGTGTGGAAGGCGAAGGATCCTaGTGTAGGGTCCGCCGTGCCGTCTCGGGAGCAGGGCTGTCGCCG +
Preference number: 5 (lower is better)
Translates to: ADRHADELGVEGEGS*CRVRRAVSGAGLSP
Trigger: CGGCGACAGCCCTGCTCCCGAGACGGCACGGCGGACCCTACACCAGGATCCTTCGCCTTCCACACCGAGTTCATCCGCGTGCCTGTCGGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000050963.4
CDS GCA 90 bp CGGGAGCAGGGCTGTCGCCGTAGTACCAGCAGGCTCTGCAGCAGCTaGACCGAGTTCAGGGCAGCTGTCTCACGGCCTGTCTTGGCGTTG +
Preference number: 5 (lower is better)
Translates to: REQGCRRSTSRLCSS*TEFRAAVSRPVLAL
Trigger: CAACGCCAAGACAGGCCGTGAGACAGCTGCCCTGAACTCGGTGCAGCTGCTGCAGAGCCTGCTGGTACTACGGCGACAGCCCTGCTCCCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000050963.4
CDS CCA 90 bp ACGGGGCACTGTGTTCCAGCTAGAGGTCCTTCATGCTGTCTCCTGTaGCCCGTGGCCTCCAAACTGGCCACCAGGGCCACAGGGAGGGCC +
Preference number: 5 (lower is better)
Translates to: TGHCVPARGPSCCLL*PVASKLATRATGRA
Trigger: GGCCCTCCCTGTGGCCCTGGTGGCCAGTTTGGAGGCCACGGGCCACAGGAGACAGCATGAAGGACCTCTAGCTGGAACACAGTGCCCCGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000050963.4
CDS CCA 90 bp GGAAGAACGCAGGTGCAGCCGACAGGCACGCGGATGAACTCGGTGTaGAAGGCGAAGGATCCTGGTGTAGGGTCCGCCGTGCCGTCTCGG +
Preference number: 5 (lower is better)
Translates to: GRTQVQPTGTRMNSV*KAKDPGVGSAVPSR
Trigger: CCGAGACGGCACGGCGGACCCTACACCAGGATCCTTCGCCTTCCACACCGAGTTCATCCGCGTGCCTGTCGGCTGCACCTGCGTTCTTCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000050963.4
CDS CCA 90 bp ACTGTGTTCCAGCTAGAGGTCCTTCATGCTGTCTCCTGTGGCCCGTaGCCTCCAAACTGGCCACCAGGGCCACAGGGAGGGCCTGCTCCC +
Preference number: 5 (lower is better)
Translates to: TVFQLEVLHAVSCGP*PPNWPPGPQGGPAP
Trigger: GGGAGCAGGCCCTCCCTGTGGCCCTGGTGGCCAGTTTGGAGGCCACGGGCCACAGGAGACAGCATGAAGGACCTCTAGCTGGAACACAGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000050963.4
CDS TCA 90 bp TCATCTGTGTCGATGCGATATCTCCATGGTGAGATGGAGCGCTCGTaGGTGTCAGCTTCCAGCACCTCCTCCGGCCGCAGCACGGGGCAC +
Preference number: 5 (lower is better)
Translates to: SSVSMRYLHGEMERS*VSASSTSSGRSTGH
Trigger: GTGCCCCGTGCTGCGGCCGGAGGAGGTGCTGGAAGCTGACACTCACGAGCGCTCCATCTCACCATGGAGATATCGCATCGACACAGATGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000050963.4
CDS TCA 90 bp GCTGCACCGAGTTCAGGGCAGCTGTCTCACGGCCTGTCTTGGCGTTaGTGCATCCACGACACAAGCATTCTGCCACCGCCAGCTTCTGTG +
Preference number: 5 (lower is better)
Translates to: AAPSSGQLSHGLSWR*CIHDTSILPPPASV
Trigger: CACAGAAGCTGGCGGTGGCAGAATGCTTGTGTCGTGGATGCATCAACGCCAAGACAGGCCGTGAGACAGCTGCCCTGAACTCGGTGCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000050963.4
CDS-3UTR CAA 90 bp GGAGGTGCCTGGAATGTCTGTCCTGGAAGGATTGTGATGCGCCACAGTGGGGCCGTCTCACGGCCTGTCTaGGCGTTGATGCATCCACGA +
Preference number: 5 (lower is better)
Translates to: GGAWNVCPGRIVMRHSGAVSRPV*ALMHPR
Trigger: TCGTGGATGCATCAACGCCAAGACAGGCCGTGAGAC...GGCCCCACTGTGGCGCATCACAATCCTTCCAGGACAGACATTCCAGGCACCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000050963.4
CDS CCA 90 bp GGTAGCGGTTCTCATCTGTGTCGATGCGATATCTCCATGGTGAGATaGAGCGCTCGTGAGTGTCAGCTTCCAGCACCTCCTCCGGCCGCA +
Preference number: 5 (lower is better)
Translates to: GSGSHLCRCDISMVR*SARECQLPAPPPAA
Trigger: TGCGGCCGGAGGAGGTGCTGGAAGCTGACACTCACGAGCGCTCCATCTCACCATGGAGATATCGCATCGACACAGATGAGAACCGCTACC
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000050963.4
CDS TCA 90 bp CTGTGGGTAGCGGTTCTCATCTGTGTCGATGCGATATCTCCATGGTaGGATGGAGCGCTCGTGAGTGTCAGCTTCCAGCACCTCCTCCGG +
Preference number: 5 (lower is better)
Translates to: LWVAVLICVDAISPW*DGALVSVSFQHLLR
Trigger: CCGGAGGAGGTGCTGGAAGCTGACACTCACGAGCGCTCCATCTCACCATGGAGATATCGCATCGACACAGATGAGAACCGCTACCCACAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000050963.4
CDS GCA 90 bp CTCACGGCCTGTCTTGGCGTTGATGCATCCACGACACAAGCATTCTaGCACCGCCAGCTTCTGTGGGTAGCGGTTCTCATCTGTGTCGAT +
Preference number: 5 (lower is better)
Translates to: LTACLGVDASTTQAF*HRQLLWVAVLICVD
Trigger: ATCGACACAGATGAGAACCGCTACCCACAGAAGCTGGCGGTGGCAGAATGCTTGTGTCGTGGATGCATCAACGCCAAGACAGGCCGTGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000050963.4
CDS CCA 72 bp CACGCGGATGAACTCGGTGTGGAAGGCGAAGGATCCTaGTGTAGGGTCCGCCGTGCCGTCTCGGGAGCAGGG +
Preference number: 6 (lower is better)
Translates to: HADELGVEGEGS*CRVRRAVSGAG
Trigger: CCCTGCTCCCGAGACGGCACGGCGGACCCTACACCAGGATCCTTCGCCTTCCACACCGAGTTCATCCGCGTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000050963.4
CDS CCA 72 bp CAGGTGCAGCCGACAGGCACGCGGATGAACTCGGTGTaGAAGGCGAAGGATCCTGGTGTAGGGTCCGCCGTG +
Preference number: 6 (lower is better)
Translates to: QVQPTGTRMNSV*KAKDPGVGSAV
Trigger: CACGGCGGACCCTACACCAGGATCCTTCGCCTTCCACACCGAGTTCATCCGCGTGCCTGTCGGCTGCACCTG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000050963.4
CDS TCA 72 bp TCGATGCGATATCTCCATGGTGAGATGGAGCGCTCGTaGGTGTCAGCTTCCAGCACCTCCTCCGGCCGCAGC +
Preference number: 6 (lower is better)
Translates to: SMRYLHGEMERS*VSASSTSSGRS
Trigger: GCTGCGGCCGGAGGAGGTGCTGGAAGCTGACACTCACGAGCGCTCCATCTCACCATGGAGATATCGCATCGA
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000050963.4
CDS CCA 72 bp TGTGTTCCAGCTAGAGGTCCTTCATGCTGTCTCCTGTaGCCCGTGGCCTCCAAACTGGCCACCAGGGCCACA +
Preference number: 6 (lower is better)
Translates to: CVPARGPSCCLL*PVASKLATRAT
Trigger: TGTGGCCCTGGTGGCCAGTTTGGAGGCCACGGGCCACAGGAGACAGCATGAAGGACCTCTAGCTGGAACACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000050963.4
CDS CAA 72 bp GAGTTCAGGGCAGCTGTCTCACGGCCTGTCTTGGCGTaGATGCATCCACGACACAAGCATTCTGCCACCGCC +
Preference number: 6 (lower is better)
Translates to: EFRAAVSRPVLA*MHPRHKHSATA
Trigger: GGCGGTGGCAGAATGCTTGTGTCGTGGATGCATCAACGCCAAGACAGGCCGTGAGACAGCTGCCCTGAACTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000050963.4
CDS CAA 90 bp AGCTGCACCGAGTTCAGGGCAGCTGTCTCACGGCCTGTCTTGGCGTaGATGCATCCACGACACAAGCATTCTGCCACCGCCAGCTTCTGT +
Preference number: 6 (lower is better)
Translates to: SCTEFRAAVSRPVLA*MHPRHKHSATASFC
Trigger: ACAGAAGCTGGCGGTGGCAGAATGCTTGTGTCGTGGATGCATCAACGCCAAGACAGGCCGTGAGACAGCTGCCCTGAACTCGGTGCAGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000050963.4
CDS CAA 72 bp TGCACCGAGTTCAGGGCAGCTGTCTCACGGCCTGTCTaGGCGTTGATGCATCCACGACACAAGCATTCTGCC +
Preference number: 6 (lower is better)
Translates to: CTEFRAAVSRPV*ALMHPRHKHSA
Trigger: GGCAGAATGCTTGTGTCGTGGATGCATCAACGCCAAGACAGGCCGTGAGACAGCTGCCCTGAACTCGGTGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000050963.4
CDS TCA 72 bp GCGGTTCTCATCTGTGTCGATGCGATATCTCCATGGTaGGATGGAGCGCTCGTGAGTGTCAGCTTCCAGCAC +
Preference number: 6 (lower is better)
Translates to: AVLICVDAISPW*DGALVSVSFQH
Trigger: GTGCTGGAAGCTGACACTCACGAGCGCTCCATCTCACCATGGAGATATCGCATCGACACAGATGAGAACCGC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000050963.4
CDS GCA 72 bp TGTCTTGGCGTTGATGCATCCACGACACAAGCATTCTaGCACCGCCAGCTTCTGTGGGTAGCGGTTCTCATC +
Preference number: 6 (lower is better)
Translates to: CLGVDASTTQAF*HRQLLWVAVLI
Trigger: GATGAGAACCGCTACCCACAGAAGCTGGCGGTGGCAGAATGCTTGTGTCGTGGATGCATCAACGCCAAGACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000050963.4
CDS CCA 72 bp TCTCATCTGTGTCGATGCGATATCTCCATGGTGAGATaGAGCGCTCGTGAGTGTCAGCTTCCAGCACCTCCT +
Preference number: 6 (lower is better)
Translates to: SHLCRCDISMVR*SARECQLPAPP
Trigger: AGGAGGTGCTGGAAGCTGACACTCACGAGCGCTCCATCTCACCATGGAGATATCGCATCGACACAGATGAGA
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000050963.4
CDS CCA 72 bp TCCACGACACAAGCATTCTGCCACCGCCAGCTTCTGTaGGTAGCGGTTCTCATCTGTGTCGATGCGATATCT +
Preference number: 6 (lower is better)
Translates to: STTQAFCHRQLL*VAVLICVDAIS
Trigger: AGATATCGCATCGACACAGATGAGAACCGCTACCCACAGAAGCTGGCGGTGGCAGAATGCTTGTGTCGTGGA
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000050963.4