Pregenerated sensors for IL17B (Mus musculus)
Ensembl gene IDs: ENSMUSG00000024578Ensembl transcript IDs: ENSMUST00000025471.4, ENSMUST00000235713.2
Found 61 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GGTTGGCTCAGAAGATGCAGGTGCAACCCACAGCGATGGTCTCCATaGCGACACGCTGGCGGCAGGGCCCAGGGCGAGGAGGTTGAGGAC | + |
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Preference number: 1 (lower is better) Translates to: GWLRRCRCNPQRWSP*RHAGGRAQGEEVED Trigger: GTCCTCAACCTCCTCGCCCTGGGCCCTGCCGCCAGCGTGTCGTCATGGAGACCATCGCTGTGGGTTGCACCTGCATCTTCTGAGCCAACC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235713.2 |
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| 3UTR CCA 90 bp | AGGTTGAGGACAGAGGCGGCGGCGCACCGGCACCTGGCTGAACACTaGCACGCTCACCATGCTACGGTCCTCCTGCATGGTGAAGGGATT | + |
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Preference number: 1 (lower is better) Translates to: RLRTEAAAHRHLAEH*HAHHATVLLHGEGI Trigger: AATCCCTTCACCATGCAGGAGGACCGTAGCATGGTGAGCGTGCCAGTGTTCAGCCAGGTGCCGGTGCGCCGCCGCCTCTGTCCTCAACCT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235713.2 |
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| 3UTR GCA 90 bp | GGCACCTGGCTGAACACTGGCACGCTCACCATGCTACGGTCCTCCTaGATGGTGAAGGGATTCACGCAACCCAAACATAGGCACCGCGCC | + |
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Preference number: 1 (lower is better) Translates to: GTWLNTGTLTMLRSS*MVKGFTQPKHRHRA Trigger: GGCGCGGTGCCTATGTTTGGGTTGCGTGAATCCCTTCACCATGCAGGAGGACCGTAGCATGGTGAGCGTGCCAGTGTTCAGCCAGGTGCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235713.2 |
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| 3UTR GCA 90 bp | AAAGAACAGCGTTTACTGTTTATCAGCCTTGAGGGTCACAGTGGGTaGAGGGAGGGAGGGTTGTTGCAGAGGCCACCGGGTTGGTGGTTG | + |
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Preference number: 1 (lower is better) Translates to: KEQRLLFISLEGHSG*REGGLLQRPPGWWL Trigger: CAACCACCAACCCGGTGGCCTCTGCAACAACCCTCCCTCCCTGCACCCACTGTGACCCTCAAGGCTGATAAACAGTAAACGCTGTTCTTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025471.4 ENSMUST00000235713.2 |
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| 3UTR-3UTR GCA 90 bp | CCCAGGGCGAGGAGGTTGAGGACAGAGGCGGCGGCGCACCGGCACCTGGCTGAAGAGGGTCACAGTGGGTaGAGGGAGGGAGGGTTGTTG | + |
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Preference number: 2 (lower is better) Translates to: PRARRLRTEAAAHRHLAEEGHSG*REGGLL Trigger: CAACAACCCTCCCTCCCTGCACCCACTGTGACCCTC...TTCAGCCAGGTGCCGGTGCGCCGCCGCCTCTGTCCTCAACCTCCTCGCCCTGGG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235713.2 |
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| 3UTR-3UTR CCA 90 bp | GATGCAGGTGCAACCCACAGCGATGGTCTCCATGACGACACGCTGGCGGCAGGGCGGCGCACCGGCACCTaGCTGAACACTGGCACGCTC | + |
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Preference number: 2 (lower is better) Translates to: DAGATHSDGLHDDTLAAGRRTGT*LNTGTL Trigger: GAGCGTGCCAGTGTTCAGCCAGGTGCCGGTGCGCCG...CCCTGCCGCCAGCGTGTCGTCATGGAGACCATCGCTGTGGGTTGCACCTGCATC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235713.2 |
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| 3UTR-3UTR TCA 90 bp | GGCACCTGGCTGAACACTGGCACGCTCACCATGCTACGGTCCTCCTGCATGGTGGGCTGGGGTCGTGGTTaGTGCTGTAGCCCCATGGGG | + |
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Preference number: 2 (lower is better) Translates to: GTWLNTGTLTMLRSSCMVGWGRG*CCSPMG Trigger: CCCCATGGGGCTACAGCATCAACCACGACCCCAGCC...CACCATGCAGGAGGACCGTAGCATGGTGAGCGTGCCAGTGTTCAGCCAGGTGCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000235713.2 |
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| 3UTR-3UTR CCA 90 bp | GCGGCGGCGCACCGGCACCTGGCTGAACACTGGCACGCTCACCATGCTACGGTCGATGCTGTAGCCCCATaGGGACAGGCTCCTCTTGTT | + |
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Preference number: 2 (lower is better) Translates to: AAAHRHLAEHWHAHHATVDAVAP*GQAPLV Trigger: AACAAGAGGAGCCTGTCCCCATGGGGCTACAGCATC...GACCGTAGCATGGTGAGCGTGCCAGTGTTCAGCCAGGTGCCGGTGCGCCGCCGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235713.2 |
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| 3UTR-3UTR GCA 90 bp | GCGAGGAGGTTGAGGACAGAGGCGGCGGCGCACCGGCACCTGGCTGAACACTGGATGCTACGGTCCTCCTaGATGGTGAAGGGATTCACG | + |
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Preference number: 2 (lower is better) Translates to: ARRLRTEAAAHRHLAEHWMLRSS*MVKGFT Trigger: CGTGAATCCCTTCACCATGCAGGAGGACCGTAGCAT...CCAGTGTTCAGCCAGGTGCCGGTGCGCCGCCGCCTCTGTCCTCAACCTCCTCGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235713.2 |
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| 3UTR-3UTR TCA 90 bp | ACCGGGTTGGTGGTTGGCTCAGAAGATGCAGGTGCAACCCACAGCGATGGTCTCGCACCGGCACCTGGCTaGACACTGGCACGCTCACCA | + |
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Preference number: 2 (lower is better) Translates to: TGLVVGSEDAGATHSDGLAPAPG*TLARSP Trigger: TGGTGAGCGTGCCAGTGTTCAGCCAGGTGCCGGTGC...GAGACCATCGCTGTGGGTTGCACCTGCATCTTCTGAGCCAACCACCAACCCGGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235713.2 |
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| 3UTR-3UTR CCA 90 bp | GATGCAGGTGCAACCCACAGCGATGGTCTCCATGACGACACGCTGGCGGCAGGGCTTCACATTTCTTCTTaGCTGGCTCGGAGCTGTTCC | + |
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Preference number: 2 (lower is better) Translates to: DAGATHSDGLHDDTLAAGLHISS*LARSCS Trigger: GGAACAGCTCCGAGCCAGCCAAGAAGAAATGTGAAG...CCCTGCCGCCAGCGTGTCGTCATGGAGACCATCGCTGTGGGTTGCACCTGCATC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235713.2 |
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| 3UTR-3UTR CCA 90 bp | TGCTGTAGCCCCATGGGGACAGGCTCCTCTTGTTGGACAACCACAGCTGTAGATGAGCTGTTCCTCAGCTaGGCCACCATCTCCCCAAGG | + |
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Preference number: 2 (lower is better) Translates to: CCSPMGTGSSCWTTTAVDELFLS*ATISPR Trigger: CCTTGGGGAGATGGTGGCCCAGCTGAGGAACAGCTC...ATCTACAGCTGTGGTTGTCCAACAAGAGGAGCCTGTCCCCATGGGGCTACAGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000235713.2 |
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| 3UTR-3UTR TCA 90 bp | TTGGCTCAGAAGATGCAGGTGCAACCCACAGCGATGGTCTCCATGACGACACGCACTGTTTATCAGCCTTaGGGGTCACAGTGGGTGCAG | + |
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Preference number: 2 (lower is better) Translates to: LAQKMQVQPTAMVSMTTRTVYQP*GSQWVQ Trigger: CTGCACCCACTGTGACCCTCAAGGCTGATAAACAGT...GCGTGTCGTCATGGAGACCATCGCTGTGGGTTGCACCTGCATCTTCTGAGCCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235713.2 |
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| 3UTR CAA 90 bp | CCCCATGGGGACAGGCTCCTCTTGTTGGACAACCACAGCTGTAGATaGACTTCACATTTCTTCTTGGCTGGCTCGGAGCTGTTCCTCAGC | + |
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Preference number: 2 (lower is better) Translates to: PHGDRLLLLDNHSCR*TSHFFLAGSELFLS Trigger: GCTGAGGAACAGCTCCGAGCCAGCCAAGAAGAAATGTGAAGTCAATCTACAGCTGTGGTTGTCCAACAAGAGGAGCCTGTCCCCATGGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000235713.2 |
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| 3UTR CAA 90 bp | CTCTTGTTGGACAACCACAGCTGTAGATTGACTTCACATTTCTTCTaGGCTGGCTCGGAGCTGTTCCTCAGCTGGGCCACCATCTCCCCA | + |
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Preference number: 2 (lower is better) Translates to: LLLDNHSCRLTSHFF*AGSELFLSWATISP Trigger: TGGGGAGATGGTGGCCCAGCTGAGGAACAGCTCCGAGCCAGCCAAGAAGAAATGTGAAGTCAATCTACAGCTGTGGTTGTCCAACAAGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235713.2 |
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| 3UTR-3UTR CCA 90 bp | GGTTGGTGGTTGGCTCAGAAGATGCAGGTGCAACCCACAGCGATGGTCTCCATGACAGGCTCCTCTTGTTaGACAACCACAGCTGTAGAT | + |
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Preference number: 2 (lower is better) Translates to: GWWLAQKMQVQPTAMVSMTGSSC*TTTAVD Trigger: ATCTACAGCTGTGGTTGTCCAACAAGAGGAGCCTGT...CATGGAGACCATCGCTGTGGGTTGCACCTGCATCTTCTGAGCCAACCACCAACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235713.2 |
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| 3UTR-3UTR GCA 90 bp | CTCCTCTTGTTGGACAACCACAGCTGTAGATTGACTTCACATTTCTTCTTGGCTGGGAGGGAGGGTTGTTaGAGAGGCCACCGGGTTGGT | + |
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Preference number: 2 (lower is better) Translates to: LLLLDNHSCRLTSHFFLAGREGC*RGHRVG Trigger: ACCAACCCGGTGGCCTCTGCAACAACCCTCCCTCCC...AGCCAAGAAGAAATGTGAAGTCAATCTACAGCTGTGGTTGTCCAACAAGAGGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235713.2 |
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| 3UTR TCA 72 bp | GTTGAGGACAGAGGCGGCGGCGCACCGGCACCTGGCTaGACACTGGCACGCTCACCATGCTACGGTCCTCCT | + |
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Preference number: 3 (lower is better) Translates to: VEDRGGGAPAPG*TLARSPCYGPP Trigger: AGGAGGACCGTAGCATGGTGAGCGTGCCAGTGTTCAGCCAGGTGCCGGTGCGCCGCCGCCTCTGTCCTCAAC 67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235713.2 |
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| 3UTR CCA 72 bp | ACAGAGGCGGCGGCGCACCGGCACCTGGCTGAACACTaGCACGCTCACCATGCTACGGTCCTCCTGCATGGT | + |
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Preference number: 3 (lower is better) Translates to: TEAAAHRHLAEH*HAHHATVLLHG Trigger: ACCATGCAGGAGGACCGTAGCATGGTGAGCGTGCCAGTGTTCAGCCAGGTGCCGGTGCGCCGCCGCCTCTGT 67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235713.2 |
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| 3UTR-3UTR CAA 90 bp | GCACCGCGCCTCGGGCAAGTCCGCAGGGATGCGGCTGGGGTCGTGGTTGATGCTGGGGACAGGCTCCTCTaGTTGGACAACCACAGCTGT | + |
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Preference number: 3 (lower is better) Translates to: APRLGQVRRDAAGVVVDAGDRLL*LDNHSC Trigger: ACAGCTGTGGTTGTCCAACAAGAGGAGCCTGTCCCC...AGCATCAACCACGACCCCAGCCGCATCCCTGCGGACTTGCCCGAGGCGCGGTGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000235713.2 |
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| 3UTR TCA 72 bp | AGAAGATGCAGGTGCAACCCACAGCGATGGTCTCCATaGCGACACGCTGGCGGCAGGGCCCAGGGCGAGGAG | + |
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Preference number: 3 (lower is better) Translates to: RRCRCNPQRWSP*RHAGGRAQGEE Trigger: CTCCTCGCCCTGGGCCCTGCCGCCAGCGTGTCGTCATGGAGACCATCGCTGTGGGTTGCACCTGCATCTTCT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235713.2 |
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| 3UTR-3UTR CAA 90 bp | GCTCAGAAGATGCAGGTGCAACCCACAGCGATGGTCTCCATGACGACACGCTGGTGCAGGGAGGGAGGGTaGTTGCAGAGGCCACCGGGT | + |
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Preference number: 3 (lower is better) Translates to: AQKMQVQPTAMVSMTTRWCREGG*LQRPPG Trigger: ACCCGGTGGCCTCTGCAACAACCCTCCCTCCCTGCA...CCAGCGTGTCGTCATGGAGACCATCGCTGTGGGTTGCACCTGCATCTTCTGAGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235713.2 |
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| 3UTR CCA 72 bp | AGGGAGGGAGGGTTGTTGCAGAGGCCACCGGGTTGGTaGTTGGCTCAGAAGATGCAGGTGCAACCCACAGCG | + |
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Preference number: 3 (lower is better) Translates to: REGGLLQRPPGW*LAQKMQVQPTA Trigger: CGCTGTGGGTTGCACCTGCATCTTCTGAGCCAACCACCAACCCGGTGGCCTCTGCAACAACCCTCCCTCCCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235713.2 |
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| 3UTR-3UTR CAA 90 bp | GGTTGGTGGTTGGCTCAGAAGATGCAGGTGCAACCCACAGCGATGGTCTCCATGAGGGAGGGAGGGTTGTaGCAGAGGCCACCGGGTTGG | + |
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Preference number: 3 (lower is better) Translates to: GWWLAQKMQVQPTAMVSMREGGL*QRPPGW Trigger: CCAACCCGGTGGCCTCTGCAACAACCCTCCCTCCCT...CATGGAGACCATCGCTGTGGGTTGCACCTGCATCTTCTGAGCCAACCACCAACC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235713.2 |
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| 3UTR CCA 72 bp | TGCAGGGAGGGAGGGTTGTTGCAGAGGCCACCGGGTTaGTGGTTGGCTCAGAAGATGCAGGTGCAACCCACA | + |
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Preference number: 3 (lower is better) Translates to: CREGGLLQRPPG*WLAQKMQVQPT Trigger: TGTGGGTTGCACCTGCATCTTCTGAGCCAACCACCAACCCGGTGGCCTCTGCAACAACCCTCCCTCCCTGCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235713.2 |
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| 3UTR TCA 72 bp | CTGGCACGCTCACCATGCTACGGTCCTCCTGCATGGTaGAGGGATTCACGCAACCCAAACATAGGCACCGCG | + |
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Preference number: 3 (lower is better) Translates to: LARSPCYGPPAW*RDSRNPNIGTA Trigger: CGCGGTGCCTATGTTTGGGTTGCGTGAATCCCTTCACCATGCAGGAGGACCGTAGCATGGTGAGCGTGCCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235713.2 |
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| 3UTR-3UTR CAA 90 bp | GCTCAGAAGATGCAGGTGCAACCCACAGCGATGGTCTCCATGACGACACGCTGGGACAGGCTCCTCTTGTaGGACAACCACAGCTGTAGA | + |
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Preference number: 3 (lower is better) Translates to: AQKMQVQPTAMVSMTTRWDRLLL*DNHSCR Trigger: TCTACAGCTGTGGTTGTCCAACAAGAGGAGCCTGTC...CCAGCGTGTCGTCATGGAGACCATCGCTGTGGGTTGCACCTGCATCTTCTGAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235713.2 |
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| 3UTR GCA 72 bp | CTGAACACTGGCACGCTCACCATGCTACGGTCCTCCTaGATGGTGAAGGGATTCACGCAACCCAAACATAGG | + |
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Preference number: 3 (lower is better) Translates to: LNTGTLTMLRSS*MVKGFTQPKHR Trigger: CCTATGTTTGGGTTGCGTGAATCCCTTCACCATGCAGGAGGACCGTAGCATGGTGAGCGTGCCAGTGTTCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235713.2 |
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| 3UTR-3UTR CAA 90 bp | AACACTGGCACGCTCACCATGCTACGGTCCTCCTGCATGGTGAAGGGATTCACGAACCACAGCTGTAGATaGACTTCACATTTCTTCTTG | + |
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Preference number: 3 (lower is better) Translates to: NTGTLTMLRSSCMVKGFTNHSCR*TSHFFL Trigger: CAAGAAGAAATGTGAAGTCAATCTACAGCTGTGGTT...CGTGAATCCCTTCACCATGCAGGAGGACCGTAGCATGGTGAGCGTGCCAGTGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235713.2 |
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| CDS-3UTR TCA 90 bp | ACAGTGGGTGCAGGGAGGGAGGGTTGTTGCAGAGGCCACCGGGTTGGTGGTTGGGCACCGGCACCTGGCTaGACACTGGCACGCTCACCA | + |
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Preference number: 4 (lower is better) Translates to: TVGAGREGCCRGHRVGGWAPAPG*TLARSP Trigger: TGGTGAGCGTGCCAGTGTTCAGCCAGGTGCCGGTGC...CCAACCACCAACCCGGTGGCCTCTGCAACAACCCTCCCTCCCTGCACCCACTGT 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025471.4 |
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| CDS-3UTR TCA 90 bp | ACAGTGGGTGCAGGGAGGGAGGGTTGTTGCAGAGGCCACCGGGTTGGTGGTTGGCAGCGATGGTCTCCATaGCGACACGCTGGCGGCAGG | + |
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Preference number: 4 (lower is better) Translates to: TVGAGREGCCRGHRVGGWQRWSP*RHAGGR Trigger: CCTGCCGCCAGCGTGTCGTCATGGAGACCATCGCTG...CCAACCACCAACCCGGTGGCCTCTGCAACAACCCTCCCTCCCTGCACCCACTGT 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025471.4 |
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| CDS-3UTR CCA 90 bp | ACAGTGGGTGCAGGGAGGGAGGGTTGTTGCAGAGGCCACCGGGTTGGTGGTTGGGTTCCGGGGGTGGCTTaGCGCCAGGAAGATGGAGAT | + |
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Preference number: 4 (lower is better) Translates to: TVGAGREGCCRGHRVGGWVPGVA*RQEDGD Trigger: ATCTCCATCTTCCTGGCGCCAAGCCACCCCCGGAAC...CCAACCACCAACCCGGTGGCCTCTGCAACAACCCTCCCTCCCTGCACCCACTGT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000025471.4 ENSMUST00000235713.2 |
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| CDS-3UTR CCA 90 bp | TGCAGGGAGGGAGGGTTGTTGCAGAGGCCACCGGGTTGGTGGTTGGCTCAGAAGGTTCCGGGGGTGGCTTaGCGCCAGGAAGATGGAGAT | + |
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Preference number: 4 (lower is better) Translates to: CREGGLLQRPPGWWLAQKVPGVA*RQEDGD Trigger: ATCTCCATCTTCCTGGCGCCAAGCCACCCCCGGAAC...CTTCTGAGCCAACCACCAACCCGGTGGCCTCTGCAACAACCCTCCCTCCCTGCA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000235713.2 |
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| CDS-3UTR CCA 90 bp | ACAGTGGGTGCAGGGAGGGAGGGTTGTTGCAGAGGCCACCGGGTTGGTGGTTGGCACCTGGCTGAACACTaGCACGCTCACCATGCTACG | + |
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Preference number: 4 (lower is better) Translates to: TVGAGREGCCRGHRVGGWHLAEH*HAHHAT Trigger: CGTAGCATGGTGAGCGTGCCAGTGTTCAGCCAGGTG...CCAACCACCAACCCGGTGGCCTCTGCAACAACCCTCCCTCCCTGCACCCACTGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025471.4 |
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| CDS-3UTR CCA 90 bp | CAGCGTTTACTGTTTATCAGCCTTGAGGGTCACAGTGGGTGCAGGGAGGGAGGGCGGCGCACCGGCACCTaGCTGAACACTGGCACGCTC | + |
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Preference number: 4 (lower is better) Translates to: QRLLFISLEGHSGCREGGRRTGT*LNTGTL Trigger: GAGCGTGCCAGTGTTCAGCCAGGTGCCGGTGCGCCG...CCCTCCCTCCCTGCACCCACTGTGACCCTCAAGGCTGATAAACAGTAAACGCTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025471.4 |
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| 3UTR CAA 72 bp | GTGCAGGGAGGGAGGGTTGTTGCAGAGGCCACCGGGTaGGTGGTTGGCTCAGAAGATGCAGGTGCAACCCAC | + |
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Preference number: 4 (lower is better) Translates to: VQGGRVVAEATG*VVGSEDAGATH Trigger: GTGGGTTGCACCTGCATCTTCTGAGCCAACCACCAACCCGGTGGCCTCTGCAACAACCCTCCCTCCCTGCAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235713.2 |
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| CDS-3UTR TCA 90 bp | CAGCGTTTACTGTTTATCAGCCTTGAGGGTCACAGTGGGTGCAGGGAGGGAGGGGGCTGGGGTCGTGGTTaGTGCTGTAGCCCCATGGGG | + |
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Preference number: 4 (lower is better) Translates to: QRLLFISLEGHSGCREGGGWGRG*CCSPMG Trigger: CCCCATGGGGCTACAGCATCAACCACGACCCCAGCC...CCCTCCCTCCCTGCACCCACTGTGACCCTCAAGGCTGATAAACAGTAAACGCTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000025471.4 |
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| 3UTR CAA 72 bp | GAGGGAGGGTTGTTGCAGAGGCCACCGGGTTGGTGGTaGGCTCAGAAGATGCAGGTGCAACCCACAGCGATG | + |
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Preference number: 4 (lower is better) Translates to: EGGLLQRPPGWW*AQKMQVQPTAM Trigger: CATCGCTGTGGGTTGCACCTGCATCTTCTGAGCCAACCACCAACCCGGTGGCCTCTGCAACAACCCTCCCTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235713.2 |
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| CDS-3UTR GCA 90 bp | ACAGTGGGTGCAGGGAGGGAGGGTTGTTGCAGAGGCCACCGGGTTGGTGGTTGGGGACTGGGCCTCCCTTaGCCTTTTCTTTTGCCTTTG | + |
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Preference number: 4 (lower is better) Translates to: TVGAGREGCCRGHRVGGWGLGLP*PFLLPL Trigger: CAAAGGCAAAAGAAAAGGGCAAGGGAGGCCCAGTCC...CCAACCACCAACCCGGTGGCCTCTGCAACAACCCTCCCTCCCTGCACCCACTGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000025471.4 ENSMUST00000235713.2 |
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| CDS-3UTR CCA 90 bp | CAGCGTTTACTGTTTATCAGCCTTGAGGGTCACAGTGGGTGCAGGGAGGGAGGGCAGGGGCCAAGGGACTaGGCCTCCCTTGCCCTTTTC | + |
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Preference number: 4 (lower is better) Translates to: QRLLFISLEGHSGCREGGQGPRD*ASLALF Trigger: GAAAAGGGCAAGGGAGGCCCAGTCCCTTGGCCCCTG...CCCTCCCTCCCTGCACCCACTGTGACCCTCAAGGCTGATAAACAGTAAACGCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025471.4 ENSMUST00000235713.2 |
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| CDS-3UTR CCA 90 bp | ACCGGGTTGGTGGTTGGCTCAGAAGATGCAGGTGCAACCCACAGCGATGGTCTCGAGAGAAGGTGGAGGTaGGGTAGGGGAGCACCACGT | + |
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Preference number: 4 (lower is better) Translates to: TGLVVGSEDAGATHSDGLERRWR*GRGAPR Trigger: ACGTGGTGCTCCCCTACCCCACCTCCACCTTCTCTC...GAGACCATCGCTGTGGGTTGCACCTGCATCTTCTGAGCCAACCACCAACCCGGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235713.2 |
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| CDS-3UTR GCA 90 bp | CAGCGTTTACTGTTTATCAGCCTTGAGGGTCACAGTGGGTGCAGGGAGGGAGGGCTGGCACGCTCACCATaGTACGGTCCTCCTGCATGG | + |
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Preference number: 4 (lower is better) Translates to: QRLLFISLEGHSGCREGGLARSP*YGPPAW Trigger: CCATGCAGGAGGACCGTAGCATGGTGAGCGTGCCAG...CCCTCCCTCCCTGCACCCACTGTGACCCTCAAGGCTGATAAACAGTAAACGCTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025471.4 |
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| CDS-3UTR CCA 90 bp | CAGCGTTTACTGTTTATCAGCCTTGAGGGTCACAGTGGGTGCAGGGAGGGAGGGGAGCTGTTCCTCAGCTaGGCCACCATCTCCCCAAGG | + |
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Preference number: 4 (lower is better) Translates to: QRLLFISLEGHSGCREGGELFLS*ATISPR Trigger: CCTTGGGGAGATGGTGGCCCAGCTGAGGAACAGCTC...CCCTCCCTCCCTGCACCCACTGTGACCCTCAAGGCTGATAAACAGTAAACGCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025471.4 |
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| CDS-3UTR CCA 90 bp | ACAGTGGGTGCAGGGAGGGAGGGTTGTTGCAGAGGCCACCGGGTTGGTGGTTGGCTTCACATTTCTTCTTaGCTGGCTCGGAGCTGTTCC | + |
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Preference number: 4 (lower is better) Translates to: TVGAGREGCCRGHRVGGWLHISS*LARSCS Trigger: GGAACAGCTCCGAGCCAGCCAAGAAGAAATGTGAAG...CCAACCACCAACCCGGTGGCCTCTGCAACAACCCTCCCTCCCTGCACCCACTGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025471.4 |
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| CDS-3UTR TCA 90 bp | CAGCGTTTACTGTTTATCAGCCTTGAGGGTCACAGTGGGTGCAGGGAGGGAGGGGGTCCTCCTGCATGGTaGAGGGATTCACGCAACCCA | + |
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Preference number: 4 (lower is better) Translates to: QRLLFISLEGHSGCREGGGPPAW*RDSRNP Trigger: TGGGTTGCGTGAATCCCTTCACCATGCAGGAGGACC...CCCTCCCTCCCTGCACCCACTGTGACCCTCAAGGCTGATAAACAGTAAACGCTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025471.4 |
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| CDS-3UTR CCA 90 bp | ACAGTGGGTGCAGGGAGGGAGGGTTGTTGCAGAGGCCACCGGGTTGGTGGTTGGACAGGCTCCTCTTGTTaGACAACCACAGCTGTAGAT | + |
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Preference number: 4 (lower is better) Translates to: TVGAGREGCCRGHRVGGWTGSSC*TTTAVD Trigger: ATCTACAGCTGTGGTTGTCCAACAAGAGGAGCCTGT...CCAACCACCAACCCGGTGGCCTCTGCAACAACCCTCCCTCCCTGCACCCACTGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025471.4 |
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| CDS-3UTR CCA 90 bp | CAGCGTTTACTGTTTATCAGCCTTGAGGGTCACAGTGGGTGCAGGGAGGGAGGGGATGCTGTAGCCCCATaGGGACAGGCTCCTCTTGTT | + |
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Preference number: 4 (lower is better) Translates to: QRLLFISLEGHSGCREGGDAVAP*GQAPLV Trigger: AACAAGAGGAGCCTGTCCCCATGGGGCTACAGCATC...CCCTCCCTCCCTGCACCCACTGTGACCCTCAAGGCTGATAAACAGTAAACGCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025471.4 |
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| CDS-3UTR GCA 90 bp | CAGCGTTTACTGTTTATCAGCCTTGAGGGTCACAGTGGGTGCAGGGAGGGAGGGATGCTACGGTCCTCCTaGATGGTGAAGGGATTCACG | + |
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Preference number: 4 (lower is better) Translates to: QRLLFISLEGHSGCREGGMLRSS*MVKGFT Trigger: CGTGAATCCCTTCACCATGCAGGAGGACCGTAGCAT...CCCTCCCTCCCTGCACCCACTGTGACCCTCAAGGCTGATAAACAGTAAACGCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025471.4 |
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| CDS-3UTR GCA 90 bp | TTGGTGGTTGGCTCAGAAGATGCAGGTGCAACCCACAGCGATGGTCTCCATGACGGACTGGGCCTCCCTTaGCCTTTTCTTTTGCCTTTG | + |
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Preference number: 4 (lower is better) Translates to: LVVGSEDAGATHSDGLHDGLGLP*PFLLPL Trigger: CAAAGGCAAAAGAAAAGGGCAAGGGAGGCCCAGTCC...GTCATGGAGACCATCGCTGTGGGTTGCACCTGCATCTTCTGAGCCAACCACCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000235713.2 |
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| 3UTR CAA 72 bp | GACAACCACAGCTGTAGATTGACTTCACATTTCTTCTaGGCTGGCTCGGAGCTGTTCCTCAGCTGGGCCACC | + |
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Preference number: 4 (lower is better) Translates to: DNHSCRLTSHFF*AGSELFLSWAT Trigger: GGTGGCCCAGCTGAGGAACAGCTCCGAGCCAGCCAAGAAGAAATGTGAAGTCAATCTACAGCTGTGGTTGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235713.2 |
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| CDS-3UTR CCA 90 bp | GACAGGCTCCTCTTGTTGGACAACCACAGCTGTAGATTGACTTCACATTTCTTCCAGGGGCCAAGGGACTaGGCCTCCCTTGCCCTTTTC | + |
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Preference number: 4 (lower is better) Translates to: DRLLLLDNHSCRLTSHFFQGPRD*ASLALF Trigger: GAAAAGGGCAAGGGAGGCCCAGTCCCTTGGCCCCTG...GAAGAAATGTGAAGTCAATCTACAGCTGTGGTTGTCCAACAAGAGGAGCCTGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000235713.2 |
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| CDS-3UTR CAA 90 bp | ACAGTGGGTGCAGGGAGGGAGGGTTGTTGCAGAGGCCACCGGGTTGGTGGTTGGTGTTCCGGGGGTGGCTaGGCGCCAGGAAGATGGAGA | + |
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Preference number: 5 (lower is better) Translates to: TVGAGREGCCRGHRVGGWCSGGG*APGRWR Trigger: TCTCCATCTTCCTGGCGCCAAGCCACCCCCGGAACA...CCAACCACCAACCCGGTGGCCTCTGCAACAACCCTCCCTCCCTGCACCCACTGT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000025471.4 ENSMUST00000235713.2 |
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| CDS-3UTR CAA 90 bp | AGGGAGGGAGGGTTGTTGCAGAGGCCACCGGGTTGGTGGTTGGCTCAGAAGATGTGTTCCGGGGGTGGCTaGGCGCCAGGAAGATGGAGA | + |
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Preference number: 5 (lower is better) Translates to: REGGLLQRPPGWWLAQKMCSGGG*APGRWR Trigger: TCTCCATCTTCCTGGCGCCAAGCCACCCCCGGAACA...CATCTTCTGAGCCAACCACCAACCCGGTGGCCTCTGCAACAACCCTCCCTCCCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000235713.2 |
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| CDS-3UTR CAA 90 bp | ACAGTGGGTGCAGGGAGGGAGGGTTGTTGCAGAGGCCACCGGGTTGGTGGTTGGCCTTGCCCTTTTCTTTaGCCTTTGGTGTTCCGGGGG | + |
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Preference number: 5 (lower is better) Translates to: TVGAGREGCCRGHRVGGWPCPFL*PLVFRG Trigger: CCCCCGGAACACCAAAGGCAAAAGAAAAGGGCAAGG...CCAACCACCAACCCGGTGGCCTCTGCAACAACCCTCCCTCCCTGCACCCACTGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025471.4 ENSMUST00000235713.2 |
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| CDS-3UTR CAA 90 bp | ACAGTGGGTGCAGGGAGGGAGGGTTGTTGCAGAGGCCACCGGGTTGGTGGTTGGGGGACTGGGCCTCCCTaGCCCTTTTCTTTTGCCTTT | + |
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Preference number: 5 (lower is better) Translates to: TVGAGREGCCRGHRVGGWGTGPP*PFSFAF Trigger: AAAGGCAAAAGAAAAGGGCAAGGGAGGCCCAGTCCC...CCAACCACCAACCCGGTGGCCTCTGCAACAACCCTCCCTCCCTGCACCCACTGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000025471.4 ENSMUST00000235713.2 |
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| CDS-3UTR CAA 90 bp | ACAGTGGGTGCAGGGAGGGAGGGTTGTTGCAGAGGCCACCGGGTTGGTGGTTGGGACAGGCTCCTCTTGTaGGACAACCACAGCTGTAGA | + |
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Preference number: 5 (lower is better) Translates to: TVGAGREGCCRGHRVGGWDRLLL*DNHSCR Trigger: TCTACAGCTGTGGTTGTCCAACAAGAGGAGCCTGTC...CCAACCACCAACCCGGTGGCCTCTGCAACAACCCTCCCTCCCTGCACCCACTGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025471.4 |
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| CDS-3UTR CAA 90 bp | CAGCGTTTACTGTTTATCAGCCTTGAGGGTCACAGTGGGTGCAGGGAGGGAGGGGGGGACAGGCTCCTCTaGTTGGACAACCACAGCTGT | + |
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Preference number: 5 (lower is better) Translates to: QRLLFISLEGHSGCREGGGDRLL*LDNHSC Trigger: ACAGCTGTGGTTGTCCAACAAGAGGAGCCTGTCCCC...CCCTCCCTCCCTGCACCCACTGTGACCCTCAAGGCTGATAAACAGTAAACGCTG 58% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt. Matches the following 1 transcripts: ENSMUST00000025471.4 |
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| CDS-3UTR CAA 90 bp | GAACACTGGCACGCTCACCATGCTACGGTCCTCCTGCATGGTGAAGGGATTCACCCTTGCCCTTTTCTTTaGCCTTTGGTGTTCCGGGGG | + |
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Preference number: 5 (lower is better) Translates to: EHWHAHHATVLLHGEGIHPCPFL*PLVFRG Trigger: CCCCCGGAACACCAAAGGCAAAAGAAAAGGGCAAGG...GTGAATCCCTTCACCATGCAGGAGGACCGTAGCATGGTGAGCGTGCCAGTGTTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235713.2 |
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| CDS CCA 90 bp | TTGACTTCACATTTCTTCTTGGCTGGCTCGGAGCTGTTCCTCAGCTaGGCCACCATCTCCCCAAGGTTCCGCTCATACTCTTCCATTCGA | + |
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Preference number: 5 (lower is better) Translates to: LTSHFFLAGSELFLS*ATISPRFRSYSSIR Trigger: TCGAATGGAAGAGTATGAGCGGAACCTTGGGGAGATGGTGGCCCAGCTGAGGAACAGCTCCGAGCCAGCCAAGAAGAAATGTGAAGTCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025471.4 |
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| CDS-3UTR CAA 90 bp | CAGCGTTTACTGTTTATCAGCCTTGAGGGTCACAGTGGGTGCAGGGAGGGAGGGAACCACAGCTGTAGATaGACTTCACATTTCTTCTTG | + |
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Preference number: 5 (lower is better) Translates to: QRLLFISLEGHSGCREGGNHSCR*TSHFFL Trigger: CAAGAAGAAATGTGAAGTCAATCTACAGCTGTGGTT...CCCTCCCTCCCTGCACCCACTGTGACCCTCAAGGCTGATAAACAGTAAACGCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025471.4 |
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| CDS CCA 72 bp | CATTTCTTCTTGGCTGGCTCGGAGCTGTTCCTCAGCTaGGCCACCATCTCCCCAAGGTTCCGCTCATACTCT | + |
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Preference number: 6 (lower is better) Translates to: HFFLAGSELFLS*ATISPRFRSYS Trigger: AGAGTATGAGCGGAACCTTGGGGAGATGGTGGCCCAGCTGAGGAACAGCTCCGAGCCAGCCAAGAAGAAATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025471.4 |
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