Pregenerated sensors for IL15RA (Mus musculus)
Ensembl gene IDs: ENSMUSG00000023206Ensembl transcript IDs: ENSMUST00000078834.12, ENSMUST00000114831.9, ENSMUST00000114832.3, ENSMUST00000114833.10, ENSMUST00000114834.10, ENSMUST00000123600.5, ENSMUST00000128156.9, ENSMUST00000135341.8, ENSMUST00000138349.8, ENSMUST00000138856.2, ENSMUST00000148748.8
Found 232 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TTGTACTCTGGGAAGTTGGCCTCTGTGATGAACCAGGAAGAAAGGTaGTGTCCTTCCGGACTCCGGGGATCCAGGCCTGAATATGGGAGG | + |
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Preference number: 1 (lower is better) Translates to: LYSGKLASVMNQEER*CPSGLRGSRPEYGR Trigger: CCTCCCATATTCAGGCCTGGATCCCCGGAGTCCGGAAGGACACCACCTTTCTTCCTGGTTCATCACAGAGGCCAACTTCCCAGAGTACAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000078834.12 ENSMUST00000114833.10 ENSMUST00000128156.9 ENSMUST00000135341.8 ENSMUST00000138349.8 ENSMUST00000148748.8 |
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| 3UTR CCA 90 bp | GGCTCCTGTGTCTTCATCCTCCTTGCTGCTGGCCCTCACAGTCATTaGTACTGTTTCCATGGTTTCCACCTCAACACGGCACGGCTGAGA | + |
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Preference number: 1 (lower is better) Translates to: GSCVFILLAAGPHSH*YCFHGFHLNTARLR Trigger: TCTCAGCCGTGCCGTGTTGAGGTGGAAACCATGGAAACAGTACCAATGACTGTGAGGGCCAGCAGCAAGGAGGATGAAGACACAGGAGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000123600.5 ENSMUST00000148748.8 |
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| 3UTR GCA 90 bp | TATCACATTGGGCTTTCTCCTGTGTCCAGGCGCAGCTGGACTAACTaGCCTTGTATCTTCTCTTCAGGATCAGCTGGGCAGGTCTCCCTG | + |
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Preference number: 1 (lower is better) Translates to: YHIGLSPVSRRSWTN*PCIFSSGSAGQVSL Trigger: CAGGGAGACCTGCCCAGCTGATCCTGAAGAGAAGATACAAGGGCAGTTAGTCCAGCTGCGCCTGGACACAGGAGAAAGCCCAATGTGATA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENSMUST00000078834.12 ENSMUST00000114831.9 ENSMUST00000114833.10 ENSMUST00000114834.10 ENSMUST00000123600.5 ENSMUST00000128156.9 ENSMUST00000135341.8 ENSMUST00000138349.8 ENSMUST00000148748.8 |
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| 3UTR GCA 90 bp | GTGGAACTCGAGGCTTTTAATGGAGACTCCCAGGAGAGCTCAGGCTaGTTGTACTCTGGGAAGTTGGCCTCTGTGATGAACCAGGAAGAA | + |
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Preference number: 1 (lower is better) Translates to: VELEAFNGDSQESSG*LYSGKLASVMNQEE Trigger: TTCTTCCTGGTTCATCACAGAGGCCAACTTCCCAGAGTACAAGCAGCCTGAGCTCTCCTGGGAGTCTCCATTAAAAGCCTCGAGTTCCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000078834.12 ENSMUST00000114833.10 ENSMUST00000128156.9 ENSMUST00000135341.8 ENSMUST00000138349.8 ENSMUST00000148748.8 |
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| 3UTR TCA 90 bp | ACTGCCCTTGTATCTTCTCTTCAGGATCAGCTGGGCAGGTCTCCCTaGGTTTCTGAAATCGTGTGGTTAGGCTCCTGTGTCTTCATCCTC | + |
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Preference number: 1 (lower is better) Translates to: TALVSSLQDQLGRSP*VSEIVWLGSCVFIL Trigger: GAGGATGAAGACACAGGAGCCTAACCACACGATTTCAGAAACTCAGGGAGACCTGCCCAGCTGATCCTGAAGAGAAGATACAAGGGCAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000123600.5 ENSMUST00000148748.8 |
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| 3UTR GCA 90 bp | CTTCAGGAGCTCAAATGTTGCTGTCTTCTTTACAGACATCTCCTGTaGCAGAGGAGCCTTGGAAGACAATGGGAGCCTTGTCAATCTCTG | + |
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Preference number: 1 (lower is better) Translates to: LQELKCCCLLYRHLL*QRSLGRQWEPCQSL Trigger: CAGAGATTGACAAGGCTCCCATTGTCTTCCAAGGCTCCTCTGGCACAGGAGATGTCTGTAAAGAAGACAGCAACATTTGAGCTCCTGAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000078834.12 ENSMUST00000114833.10 ENSMUST00000128156.9 ENSMUST00000135341.8 ENSMUST00000138349.8 ENSMUST00000148748.8 |
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| 3UTR CCA 90 bp | ATGTTGCTGTCTTCTTTACAGACATCTCCTGTGCCAGAGGAGCCTTaGAAGACAATGGGAGCCTTGTCAATCTCTGTAAACTGCAAGTCA | + |
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Preference number: 1 (lower is better) Translates to: MLLSSLQTSPVPEEP*KTMGALSISVNCKS Trigger: TGACTTGCAGTTTACAGAGATTGACAAGGCTCCCATTGTCTTCCAAGGCTCCTCTGGCACAGGAGATGTCTGTAAAGAAGACAGCAACAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000078834.12 ENSMUST00000114833.10 ENSMUST00000128156.9 ENSMUST00000135341.8 ENSMUST00000138349.8 ENSMUST00000148748.8 |
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| 3UTR-3UTR TCA 90 bp | AACTCGAGGCTTTTAATGGAGACTCCCAGGAGAGCTCAGGCTGCTTGTACTCTGCCGGGGATCCAGGCCTaGATATGGGAGGCACCCAGG | + |
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Preference number: 2 (lower is better) Translates to: NSRLLMETPRRAQAACTLPGIQA*IWEAPR Trigger: CCTGGGTGCCTCCCATATTCAGGCCTGGATCCCCGG...CAGAGTACAAGCAGCCTGAGCTCTCCTGGGAGTCTCCATTAAAAGCCTCGAGTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000078834.12 ENSMUST00000114833.10 ENSMUST00000128156.9 ENSMUST00000135341.8 ENSMUST00000138349.8 ENSMUST00000148748.8 |
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| 3UTR-3UTR TCA 90 bp | GCTCAAATGTTGCTGTCTTCTTTACAGACATCTCCTGTGCCAGAGGAGCCTTGGCCGGGGATCCAGGCCTaGATATGGGAGGCACCCAGG | + |
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Preference number: 2 (lower is better) Translates to: AQMLLSSLQTSPVPEEPWPGIQA*IWEAPR Trigger: CCTGGGTGCCTCCCATATTCAGGCCTGGATCCCCGG...CCAAGGCTCCTCTGGCACAGGAGATGTCTGTAAAGAAGACAGCAACATTTGAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000078834.12 ENSMUST00000114833.10 ENSMUST00000128156.9 ENSMUST00000135341.8 ENSMUST00000138349.8 ENSMUST00000148748.8 |
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| 3UTR CAA 90 bp | AGGCTCCTGTGTCTTCATCCTCCTTGCTGCTGGCCCTCACAGTCATaGGTACTGTTTCCATGGTTTCCACCTCAACACGGCACGGCTGAG | + |
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Preference number: 2 (lower is better) Translates to: RLLCLHPPCCWPSQS*VLFPWFPPQHGTAE Trigger: CTCAGCCGTGCCGTGTTGAGGTGGAAACCATGGAAACAGTACCAATGACTGTGAGGGCCAGCAGCAAGGAGGATGAAGACACAGGAGCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000123600.5 ENSMUST00000148748.8 |
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| 3UTR-3UTR TCA 90 bp | TGTTGCTGTCTTCTTTACAGACATCTCCTGTGCCAGAGGAGCCTTGGAAGACAACCGGGGATCCAGGCCTaGATATGGGAGGCACCCAGG | + |
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Preference number: 2 (lower is better) Translates to: CCCLLYRHLLCQRSLGRQPGIQA*IWEAPR Trigger: CCTGGGTGCCTCCCATATTCAGGCCTGGATCCCCGG...TTGTCTTCCAAGGCTCCTCTGGCACAGGAGATGTCTGTAAAGAAGACAGCAACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000078834.12 ENSMUST00000114833.10 ENSMUST00000128156.9 ENSMUST00000135341.8 ENSMUST00000138349.8 ENSMUST00000148748.8 |
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| 3UTR-3UTR TCA 90 bp | TCAGGAGCTCAAATGTTGCTGTCTTCTTTACAGACATCTCCTGTGCCAGAGGAGCCGGGGATCCAGGCCTaGATATGGGAGGCACCCAGG | + |
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Preference number: 2 (lower is better) Translates to: SGAQMLLSSLQTSPVPEEPGIQA*IWEAPR Trigger: CCTGGGTGCCTCCCATATTCAGGCCTGGATCCCCGG...CTCCTCTGGCACAGGAGATGTCTGTAAAGAAGACAGCAACATTTGAGCTCCTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000078834.12 ENSMUST00000114833.10 ENSMUST00000128156.9 ENSMUST00000135341.8 ENSMUST00000138349.8 ENSMUST00000148748.8 |
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| 3UTR-3UTR TCA 90 bp | GTTGCTGTCTTCTTTACAGACATCTCCTGTGCCAGAGGAGCCTTGGAAGACAATCCGGGGATCCAGGCCTaGATATGGGAGGCACCCAGG | + |
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Preference number: 2 (lower is better) Translates to: VAVFFTDISCARGALEDNPGIQA*IWEAPR Trigger: CCTGGGTGCCTCCCATATTCAGGCCTGGATCCCCGG...ATTGTCTTCCAAGGCTCCTCTGGCACAGGAGATGTCTGTAAAGAAGACAGCAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000078834.12 ENSMUST00000114833.10 ENSMUST00000128156.9 ENSMUST00000135341.8 ENSMUST00000138349.8 ENSMUST00000148748.8 |
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| 3UTR-3UTR CCA 90 bp | GGGAAGTTGGCCTCTGTGATGAACCAGGAAGAAAGGTGGTGTCCTTCCGGACTCAACCAGGAAGAAAGGTaGTGTCCTTCCGGACTCCGG | + |
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Preference number: 2 (lower is better) Translates to: GKLASVMNQEERWCPSGLNQEER*CPSGLR Trigger: CCGGAGTCCGGAAGGACACCACCTTTCTTCCTGGTT...GAGTCCGGAAGGACACCACCTTTCTTCCTGGTTCATCACAGAGGCCAACTTCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000078834.12 ENSMUST00000114833.10 ENSMUST00000128156.9 ENSMUST00000135341.8 ENSMUST00000138349.8 ENSMUST00000148748.8 |
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| 3UTR CAA 90 bp | AATGGAGACTCCCAGGAGAGCTCAGGCTGCTTGTACTCTGGGAAGTaGGCCTCTGTGATGAACCAGGAAGAAAGGTGGTGTCCTTCCGGA | + |
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Preference number: 2 (lower is better) Translates to: NGDSQESSGCLYSGK*ASVMNQEERWCPSG Trigger: TCCGGAAGGACACCACCTTTCTTCCTGGTTCATCACAGAGGCCAACTTCCCAGAGTACAAGCAGCCTGAGCTCTCCTGGGAGTCTCCATT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000078834.12 ENSMUST00000114833.10 ENSMUST00000128156.9 ENSMUST00000135341.8 ENSMUST00000138349.8 ENSMUST00000148748.8 |
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| 3UTR-3UTR TCA 90 bp | GAGAGCTCAGGCTGCTTGTACTCTGGGAAGTTGGCCTCTGTGATGAACCAGGAACTGGGCAGGTCTCCCTaGGTTTCTGAAATCGTGTGG | + |
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Preference number: 2 (lower is better) Translates to: ESSGCLYSGKLASVMNQELGRSP*VSEIVW Trigger: CCACACGATTTCAGAAACTCAGGGAGACCTGCCCAG...TTCCTGGTTCATCACAGAGGCCAACTTCCCAGAGTACAAGCAGCCTGAGCTCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000078834.12 ENSMUST00000114833.10 ENSMUST00000128156.9 ENSMUST00000135341.8 ENSMUST00000138349.8 ENSMUST00000148748.8 |
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| 3UTR-3UTR TCA 90 bp | CTTCTCTTCAGGATCAGCTGGGCAGGTCTCCCTGAGTTTCTGAAATCGTGTGGTCTGGGCAGGTCTCCCTaGGTTTCTGAAATCGTGTGG | + |
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Preference number: 2 (lower is better) Translates to: LLFRISWAGLPEFLKSCGLGRSP*VSEIVW Trigger: CCACACGATTTCAGAAACTCAGGGAGACCTGCCCAG...ACCACACGATTTCAGAAACTCAGGGAGACCTGCCCAGCTGATCCTGAAGAGAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000123600.5 ENSMUST00000148748.8 |
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| 3UTR-3UTR TCA 90 bp | TTGGGCTTTCTCCTGTGTCCAGGCGCAGCTGGACTAACTGCCCTTGTATCTTCTCTGAGAAGGCTGCCTTaGTTTGATGTACCAGGCCAG | + |
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Preference number: 2 (lower is better) Translates to: LGFLLCPGAAGLTALVSSLRRLP*FDVPGQ Trigger: CTGGCCTGGTACATCAAATCAAGGCAGCCTTCTCAG...AGAAGATACAAGGGCAGTTAGTCCAGCTGCGCCTGGACACAGGAGAAAGCCCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000123600.5 ENSMUST00000148748.8 |
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| 3UTR-3UTR CCA 90 bp | AACTCGAGGCTTTTAATGGAGACTCCCAGGAGAGCTCAGGCTGCTTGTACTCTGAACCAGGAAGAAAGGTaGTGTCCTTCCGGACTCCGG | + |
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Preference number: 2 (lower is better) Translates to: NSRLLMETPRRAQAACTLNQEER*CPSGLR Trigger: CCGGAGTCCGGAAGGACACCACCTTTCTTCCTGGTT...CAGAGTACAAGCAGCCTGAGCTCTCCTGGGAGTCTCCATTAAAAGCCTCGAGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000078834.12 ENSMUST00000114833.10 ENSMUST00000128156.9 ENSMUST00000135341.8 ENSMUST00000138349.8 ENSMUST00000148748.8 |
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| 3UTR CAA 90 bp | GAACTCGAGGCTTTTAATGGAGACTCCCAGGAGAGCTCAGGCTGCTaGTACTCTGGGAAGTTGGCCTCTGTGATGAACCAGGAAGAAAGG | + |
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Preference number: 2 (lower is better) Translates to: ELEAFNGDSQESSGC*YSGKLASVMNQEER Trigger: CCTTTCTTCCTGGTTCATCACAGAGGCCAACTTCCCAGAGTACAAGCAGCCTGAGCTCTCCTGGGAGTCTCCATTAAAAGCCTCGAGTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000078834.12 ENSMUST00000114833.10 ENSMUST00000128156.9 ENSMUST00000135341.8 ENSMUST00000138349.8 ENSMUST00000148748.8 |
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| 3UTR-3UTR CCA 90 bp | CCTCCAATAGGTGCAAAGCAGCAAAGGGCCAAGTCTTCAGGAGCTCAAATGTTGGTGCCAGAGGAGCCTTaGAAGACAATGGGAGCCTTG | + |
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Preference number: 2 (lower is better) Translates to: PPIGAKQQRAKSSGAQMLVPEEP*KTMGAL Trigger: CAAGGCTCCCATTGTCTTCCAAGGCTCCTCTGGCAC...CAACATTTGAGCTCCTGAAGACTTGGCCCTTTGCTGCTTTGCACCTATTGGAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000078834.12 ENSMUST00000114833.10 ENSMUST00000128156.9 ENSMUST00000135341.8 ENSMUST00000138349.8 ENSMUST00000148748.8 |
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| 3UTR-3UTR TCA 90 bp | TCTCCTCCAATAGGTGCAAAGCAGCAAAGGGCCAAGTCTTCAGGAGCTCAAATGCTGAGAAGGCTGCCTTaGTTTGATGTACCAGGCCAG | + |
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Preference number: 2 (lower is better) Translates to: SPPIGAKQQRAKSSGAQMLRRLP*FDVPGQ Trigger: CTGGCCTGGTACATCAAATCAAGGCAGCCTTCTCAG...CATTTGAGCTCCTGAAGACTTGGCCCTTTGCTGCTTTGCACCTATTGGAGGAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148748.8 |
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| 3UTR-3UTR CCA 90 bp | TCATACCAGAGACCTCTATTATCACATTGGGCTTTCTCCTGTGTCCAGGCGCAGCTCTTCAGGATCAGCTaGGCAGGTCTCCCTGAGTTT | + |
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Preference number: 2 (lower is better) Translates to: SYQRPLLSHWAFSCVQAQLFRIS*AGLPEF Trigger: AAACTCAGGGAGACCTGCCCAGCTGATCCTGAAGAG...CTGCGCCTGGACACAGGAGAAAGCCCAATGTGATAATAGAGGTCTCTGGTATGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENSMUST00000078834.12 ENSMUST00000114831.9 ENSMUST00000114833.10 ENSMUST00000114834.10 ENSMUST00000123600.5 ENSMUST00000128156.9 ENSMUST00000135341.8 ENSMUST00000138349.8 ENSMUST00000148748.8 |
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| 3UTR-3UTR CCA 90 bp | CCTCCAATAGGTGCAAAGCAGCAAAGGGCCAAGTCTTCAGGAGCTCAAATGTTGCTCTTCAGGATCAGCTaGGCAGGTCTCCCTGAGTTT | + |
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Preference number: 2 (lower is better) Translates to: PPIGAKQQRAKSSGAQMLLFRIS*AGLPEF Trigger: AAACTCAGGGAGACCTGCCCAGCTGATCCTGAAGAG...CAACATTTGAGCTCCTGAAGACTTGGCCCTTTGCTGCTTTGCACCTATTGGAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000078834.12 ENSMUST00000114833.10 ENSMUST00000128156.9 ENSMUST00000135341.8 ENSMUST00000138349.8 ENSMUST00000148748.8 |
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| 3UTR-3UTR CCA 90 bp | CTGCTCTCCTCCAATAGGTGCAAAGCAGCAAAGGGCCAAGTCTTCAGGAGCTCAAGCCTTGGAAGACAATaGGAGCCTTGTCAATCTCTG | + |
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Preference number: 2 (lower is better) Translates to: LLSSNRCKAAKGQVFRSSSLGRQ*EPCQSL Trigger: CAGAGATTGACAAGGCTCCCATTGTCTTCCAAGGCT...TGAGCTCCTGAAGACTTGGCCCTTTGCTGCTTTGCACCTATTGGAGGAGAGCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000078834.12 ENSMUST00000114833.10 ENSMUST00000128156.9 ENSMUST00000135341.8 ENSMUST00000138349.8 ENSMUST00000148748.8 |
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| 3UTR-3UTR TCA 90 bp | AATGCTAGCTGGGCTCAGACTTGCCATTGTTTAGTTCACGTTGCTTCTACTCACCTGGGCAGGTCTCCCTaGGTTTCTGAAATCGTGTGG | + |
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Preference number: 2 (lower is better) Translates to: NASWAQTCHCLVHVASTHLGRSP*VSEIVW Trigger: CCACACGATTTCAGAAACTCAGGGAGACCTGCCCAG...GTGAGTAGAAGCAACGTGAACTAAACAATGGCAAGTCTGAGCCCAGCTAGCATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114833.10 ENSMUST00000138349.8 |
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| 3UTR-3UTR TCA 90 bp | GATCATACCAGAGACCTCTATTATCACATTGGGCTTTCTCCTGTGTCCAGGCGCAAGGCTGCCTTGATTTaGTGTACCAGGCCAGGAAAG | + |
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Preference number: 2 (lower is better) Translates to: DHTRDLYYHIGLSPVSRRKAALI*CTRPGK Trigger: CTTTCCTGGCCTGGTACATCAAATCAAGGCAGCCTT...GCGCCTGGACACAGGAGAAAGCCCAATGTGATAATAGAGGTCTCTGGTATGATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000123600.5 ENSMUST00000148748.8 |
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| 3UTR-3UTR GCA 90 bp | CCAATAGGTGCAAAGCAGCAAAGGGCCAAGTCTTCAGGAGCTCAAATGTTGCTGCTCTCCTCCAATAGGTaGAAAGCAGCAAAGGGCCAA | + |
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Preference number: 2 (lower is better) Translates to: PIGAKQQRAKSSGAQMLLLSSNR*KAAKGQ Trigger: TTGGCCCTTTGCTGCTTTGCACCTATTGGAGGAGAG...CAGCAACATTTGAGCTCCTGAAGACTTGGCCCTTTGCTGCTTTGCACCTATTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000078834.12 ENSMUST00000114833.10 ENSMUST00000128156.9 ENSMUST00000135341.8 ENSMUST00000138349.8 ENSMUST00000148748.8 |
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| 3UTR-3UTR GCA 90 bp | GTTGCTGTCTTCTTTACAGACATCTCCTGTGCCAGAGGAGCCTTGGAAGACAATCTTCATCCTCCTTGCTaGTGGCCCTCACAGTCATTG | + |
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Preference number: 2 (lower is better) Translates to: VAVFFTDISCARGALEDNLHPPC*WPSQSL Trigger: CAATGACTGTGAGGGCCAGCAGCAAGGAGGATGAAG...ATTGTCTTCCAAGGCTCCTCTGGCACAGGAGATGTCTGTAAAGAAGACAGCAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148748.8 |
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| 3UTR-3UTR CCA 90 bp | GGGCAGTGGTGGTGTGACTCTGTTTTTGAAAGAGAACCTGAGATCTCTTTCACAGTGCCAGAGGAGCCTTaGAAGACAATGGGAGCCTTG | + |
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Preference number: 2 (lower is better) Translates to: GQWWCDSVFEREPEISFTVPEEP*KTMGAL Trigger: CAAGGCTCCCATTGTCTTCCAAGGCTCCTCTGGCAC...TGTGAAAGAGATCTCAGGTTCTCTTTCAAAAACAGAGTCACACCACCACTGCCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000114833.10 ENSMUST00000138349.8 |
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| 3UTR-3UTR GCA 90 bp | GTTGCTGTCTTCTTTACAGACATCTCCTGTGCCAGAGGAGCCTTGGAAGACAATCTCTCCTCCAATAGGTaGAAAGCAGCAAAGGGCCAA | + |
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Preference number: 2 (lower is better) Translates to: VAVFFTDISCARGALEDNLSSNR*KAAKGQ Trigger: TTGGCCCTTTGCTGCTTTGCACCTATTGGAGGAGAG...ATTGTCTTCCAAGGCTCCTCTGGCACAGGAGATGTCTGTAAAGAAGACAGCAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000078834.12 ENSMUST00000114833.10 ENSMUST00000128156.9 ENSMUST00000135341.8 ENSMUST00000138349.8 ENSMUST00000148748.8 |
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| 3UTR-3UTR TCA 90 bp | AAAACAGATCATACCAGAGACCTCTATTATCACATTGGGCTTTCTCCTGTGTCCCTGGGCAGGTCTCCCTaGGTTTCTGAAATCGTGTGG | + |
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Preference number: 2 (lower is better) Translates to: KTDHTRDLYYHIGLSPVSLGRSP*VSEIVW Trigger: CCACACGATTTCAGAAACTCAGGGAGACCTGCCCAG...GGACACAGGAGAAAGCCCAATGTGATAATAGAGGTCTCTGGTATGATCTGTTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 9 transcripts: ENSMUST00000078834.12 ENSMUST00000114831.9 ENSMUST00000114833.10 ENSMUST00000114834.10 ENSMUST00000123600.5 ENSMUST00000128156.9 ENSMUST00000135341.8 ENSMUST00000138349.8 ENSMUST00000148748.8 |
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| 3UTR-3UTR CCA 90 bp | AACAGATCATACCAGAGACCTCTATTATCACATTGGGCTTTCTCCTGTGTCCAGCTCTTCAGGATCAGCTaGGCAGGTCTCCCTGAGTTT | + |
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Preference number: 2 (lower is better) Translates to: NRSYQRPLLSHWAFSCVQLFRIS*AGLPEF Trigger: AAACTCAGGGAGACCTGCCCAGCTGATCCTGAAGAG...CTGGACACAGGAGAAAGCCCAATGTGATAATAGAGGTCTCTGGTATGATCTGTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENSMUST00000078834.12 ENSMUST00000114831.9 ENSMUST00000114833.10 ENSMUST00000114834.10 ENSMUST00000123600.5 ENSMUST00000128156.9 ENSMUST00000135341.8 ENSMUST00000138349.8 ENSMUST00000148748.8 |
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| 3UTR-3UTR CCA 90 bp | GGGAGCCTTGTCAATCTCTGTAAACTGCAAGTCAGAGTAGGGAATAGAAAAAGAAACCAGGAAGAAAGGTaGTGTCCTTCCGGACTCCGG | + |
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Preference number: 2 (lower is better) Translates to: GSLVNLCKLQVRVGNRKRNQEER*CPSGLR Trigger: CCGGAGTCCGGAAGGACACCACCTTTCTTCCTGGTT...TCTTTTTCTATTCCCTACTCTGACTTGCAGTTTACAGAGATTGACAAGGCTCCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000078834.12 ENSMUST00000114833.10 ENSMUST00000128156.9 ENSMUST00000135341.8 ENSMUST00000138349.8 ENSMUST00000148748.8 |
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| 3UTR CAA 90 bp | AATGTTGCTGTCTTCTTTACAGACATCTCCTGTGCCAGAGGAGCCTaGGAAGACAATGGGAGCCTTGTCAATCTCTGTAAACTGCAAGTC | + |
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Preference number: 2 (lower is better) Translates to: NVAVFFTDISCARGA*EDNGSLVNLCKLQV Trigger: GACTTGCAGTTTACAGAGATTGACAAGGCTCCCATTGTCTTCCAAGGCTCCTCTGGCACAGGAGATGTCTGTAAAGAAGACAGCAACATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000078834.12 ENSMUST00000114833.10 ENSMUST00000128156.9 ENSMUST00000135341.8 ENSMUST00000138349.8 ENSMUST00000148748.8 |
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| 3UTR-3UTR TCA 90 bp | AGTAAAACAGATCATACCAGAGACCTCTATTATCACATTGGGCTTTCTCCTGTGCTGGGCAGGTCTCCCTaGGTTTCTGAAATCGTGTGG | + |
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Preference number: 2 (lower is better) Translates to: SKTDHTRDLYYHIGLSPVLGRSP*VSEIVW Trigger: CCACACGATTTCAGAAACTCAGGGAGACCTGCCCAG...CACAGGAGAAAGCCCAATGTGATAATAGAGGTCTCTGGTATGATCTGTTTTACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 9 transcripts: ENSMUST00000078834.12 ENSMUST00000114831.9 ENSMUST00000114833.10 ENSMUST00000114834.10 ENSMUST00000123600.5 ENSMUST00000128156.9 ENSMUST00000135341.8 ENSMUST00000138349.8 ENSMUST00000148748.8 |
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| 3UTR-3UTR GCA 90 bp | GTTGCTGTCTTCTTTACAGACATCTCCTGTGCCAGAGGAGCCTTGGAAGACAATTCTTCTTCTGTTCTCTaGTCTCCTCCAATAGGTGCA | + |
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Preference number: 2 (lower is better) Translates to: VAVFFTDISCARGALEDNSSSVL*SPPIGA Trigger: TGCACCTATTGGAGGAGAGCAGAGAACAGAAGAAGA...ATTGTCTTCCAAGGCTCCTCTGGCACAGGAGATGTCTGTAAAGAAGACAGCAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000078834.12 ENSMUST00000114833.10 ENSMUST00000128156.9 ENSMUST00000135341.8 ENSMUST00000138349.8 ENSMUST00000148748.8 |
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| 3UTR-3UTR CCA 90 bp | AAAACAGATCATACCAGAGACCTCTATTATCACATTGGGCTTTCTCCTGTGTCCCTCTTCAGGATCAGCTaGGCAGGTCTCCCTGAGTTT | + |
|
Preference number: 2 (lower is better) Translates to: KTDHTRDLYYHIGLSPVSLFRIS*AGLPEF Trigger: AAACTCAGGGAGACCTGCCCAGCTGATCCTGAAGAG...GGACACAGGAGAAAGCCCAATGTGATAATAGAGGTCTCTGGTATGATCTGTTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 9 transcripts: ENSMUST00000078834.12 ENSMUST00000114831.9 ENSMUST00000114833.10 ENSMUST00000114834.10 ENSMUST00000123600.5 ENSMUST00000128156.9 ENSMUST00000135341.8 ENSMUST00000138349.8 ENSMUST00000148748.8 |
||
| 3UTR-3UTR CCA 90 bp | AGTAAAACAGATCATACCAGAGACCTCTATTATCACATTGGGCTTTCTCCTGTGAACCAGGAAGAAAGGTaGTGTCCTTCCGGACTCCGG | + |
|
Preference number: 2 (lower is better) Translates to: SKTDHTRDLYYHIGLSPVNQEER*CPSGLR Trigger: CCGGAGTCCGGAAGGACACCACCTTTCTTCCTGGTT...CACAGGAGAAAGCCCAATGTGATAATAGAGGTCTCTGGTATGATCTGTTTTACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000078834.12 ENSMUST00000114833.10 ENSMUST00000128156.9 ENSMUST00000135341.8 ENSMUST00000138349.8 ENSMUST00000148748.8 |
||
| 3UTR-3UTR GCA 90 bp | AGTAAAACAGATCATACCAGAGACCTCTATTATCACATTGGGCTTTCTCCTGTGTGTCTTCATCCTCCTTaGTGCTGGCCCTCACAGTCA | + |
|
Preference number: 2 (lower is better) Translates to: SKTDHTRDLYYHIGLSPVCLHPP*CWPSQS Trigger: TGACTGTGAGGGCCAGCAGCAAGGAGGATGAAGACA...CACAGGAGAAAGCCCAATGTGATAATAGAGGTCTCTGGTATGATCTGTTTTACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000123600.5 ENSMUST00000148748.8 |
||
| 3UTR-3UTR CCA 90 bp | GTAAAACAGATCATACCAGAGACCTCTATTATCACATTGGGCTTTCTCCTGTGTCTCTTCAGGATCAGCTaGGCAGGTCTCCCTGAGTTT | + |
|
Preference number: 2 (lower is better) Translates to: VKQIIPETSIITLGFLLCLFRIS*AGLPEF Trigger: AAACTCAGGGAGACCTGCCCAGCTGATCCTGAAGAG...ACACAGGAGAAAGCCCAATGTGATAATAGAGGTCTCTGGTATGATCTGTTTTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 9 transcripts: ENSMUST00000078834.12 ENSMUST00000114831.9 ENSMUST00000114833.10 ENSMUST00000114834.10 ENSMUST00000123600.5 ENSMUST00000128156.9 ENSMUST00000135341.8 ENSMUST00000138349.8 ENSMUST00000148748.8 |
||
| 3UTR-3UTR CCA 90 bp | AAAGCAGCAAAGGGCCAAGTCTTCAGGAGCTCAAATGTTGCTGTCTTCTTTACAAGCCTTGGAAGACAATaGGAGCCTTGTCAATCTCTG | + |
|
Preference number: 2 (lower is better) Translates to: KAAKGQVFRSSNVAVFFTSLGRQ*EPCQSL Trigger: CAGAGATTGACAAGGCTCCCATTGTCTTCCAAGGCT...TGTAAAGAAGACAGCAACATTTGAGCTCCTGAAGACTTGGCCCTTTGCTGCTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000078834.12 ENSMUST00000114833.10 ENSMUST00000128156.9 ENSMUST00000135341.8 ENSMUST00000138349.8 ENSMUST00000148748.8 |
||
| 3UTR-3UTR CCA 90 bp | TCTCCTCCAATAGGTGCAAAGCAGCAAAGGGCCAAGTCTTCAGGAGCTCAAATGTACGAAAGGGTTCATTaGCTCAGTATCTCTTCTTCT | + |
|
Preference number: 2 (lower is better) Translates to: SPPIGAKQQRAKSSGAQMYERVH*LSISSS Trigger: AGAAGAAGAGATACTGAGCCAATGAACCCTTTCGTA...CATTTGAGCTCCTGAAGACTTGGCCCTTTGCTGCTTTGCACCTATTGGAGGAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000078834.12 ENSMUST00000114833.10 ENSMUST00000128156.9 ENSMUST00000135341.8 ENSMUST00000138349.8 ENSMUST00000148748.8 |
||
| 3UTR-3UTR CCA 90 bp | AGTAAAACAGATCATACCAGAGACCTCTATTATCACATTGGGCTTTCTCCTGTGCATCCTCCTTGCTGCTaGCCCTCACAGTCATTGGTA | + |
|
Preference number: 2 (lower is better) Translates to: SKTDHTRDLYYHIGLSPVHPPCC*PSQSLV Trigger: TACCAATGACTGTGAGGGCCAGCAGCAAGGAGGATG...CACAGGAGAAAGCCCAATGTGATAATAGAGGTCTCTGGTATGATCTGTTTTACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000123600.5 ENSMUST00000148748.8 |
||
| 3UTR-3UTR TCA 90 bp | CTCAGTAAAACAGATCATACCAGAGACCTCTATTATCACATTGGGCTTTCTCCTAAGGCTGCCTTGATTTaGTGTACCAGGCCAGGAAAG | + |
|
Preference number: 2 (lower is better) Translates to: LSKTDHTRDLYYHIGLSPKAALI*CTRPGK Trigger: CTTTCCTGGCCTGGTACATCAAATCAAGGCAGCCTT...AGGAGAAAGCCCAATGTGATAATAGAGGTCTCTGGTATGATCTGTTTTACTGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000123600.5 ENSMUST00000148748.8 |
||
| 3UTR-3UTR CCA 90 bp | GGGAGCCTTGTCAATCTCTGTAAACTGCAAGTCAGAGTAGGGAATAGAAAAAGATTGGTACTGTTTCCATaGTTTCCACCTCAACACGGC | + |
|
Preference number: 2 (lower is better) Translates to: GSLVNLCKLQVRVGNRKRLVLFP*FPPQHG Trigger: GCCGTGTTGAGGTGGAAACCATGGAAACAGTACCAA...TCTTTTTCTATTCCCTACTCTGACTTGCAGTTTACAGAGATTGACAAGGCTCCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000148748.8 |
||
| 3UTR-3UTR CCA 90 bp | AGTAAAACAGATCATACCAGAGACCTCTATTATCACATTGGGCTTTCTCCTGTGTTGGTACTGTTTCCATaGTTTCCACCTCAACACGGC | + |
|
Preference number: 2 (lower is better) Translates to: SKTDHTRDLYYHIGLSPVLVLFP*FPPQHG Trigger: GCCGTGTTGAGGTGGAAACCATGGAAACAGTACCAA...CACAGGAGAAAGCCCAATGTGATAATAGAGGTCTCTGGTATGATCTGTTTTACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000123600.5 ENSMUST00000148748.8 |
||
| 3UTR CCA 72 bp | GGGAAGTTGGCCTCTGTGATGAACCAGGAAGAAAGGTaGTGTCCTTCCGGACTCCGGGGATCCAGGCCTGAA | + |
|
Preference number: 3 (lower is better) Translates to: GKLASVMNQEER*CPSGLRGSRPE Trigger: TTCAGGCCTGGATCCCCGGAGTCCGGAAGGACACCACCTTTCTTCCTGGTTCATCACAGAGGCCAACTTCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000078834.12 ENSMUST00000114833.10 ENSMUST00000128156.9 ENSMUST00000135341.8 ENSMUST00000138349.8 ENSMUST00000148748.8 |
||
| 3UTR GCA 72 bp | GGGCTTTCTCCTGTGTCCAGGCGCAGCTGGACTAACTaGCCTTGTATCTTCTCTTCAGGATCAGCTGGGCAG | + |
|
Preference number: 3 (lower is better) Translates to: GLSPVSRRSWTN*PCIFSSGSAGQ Trigger: CTGCCCAGCTGATCCTGAAGAGAAGATACAAGGGCAGTTAGTCCAGCTGCGCCTGGACACAGGAGAAAGCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENSMUST00000078834.12 ENSMUST00000114831.9 ENSMUST00000114833.10 ENSMUST00000114834.10 ENSMUST00000123600.5 ENSMUST00000128156.9 ENSMUST00000135341.8 ENSMUST00000138349.8 ENSMUST00000148748.8 |
||
| 3UTR-3UTR CAA 90 bp | TGTCCTTCCGGACTCCGGGGATCCAGGCCTGAATATGGGAGGCACCCAGGCTCAACCTCTATTATCACATaGGGCTTTCTCCTGTGTCCA | + |
|
Preference number: 3 (lower is better) Translates to: CPSGLRGSRPEYGRHPGSTSIIT*GFLLCP Trigger: TGGACACAGGAGAAAGCCCAATGTGATAATAGAGGT...TGAGCCTGGGTGCCTCCCATATTCAGGCCTGGATCCCCGGAGTCCGGAAGGACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000078834.12 ENSMUST00000114833.10 ENSMUST00000128156.9 ENSMUST00000135341.8 ENSMUST00000138349.8 ENSMUST00000148748.8 |
||
| 3UTR CCA 72 bp | TGCTGCTGGCCCTCACAGTCATTGGTACTGTTTCCATaGTTTCCACCTCAACACGGCACGGCTGAGAAGGCT | + |
|
Preference number: 3 (lower is better) Translates to: CCWPSQSLVLFP*FPPQHGTAEKA Trigger: AGCCTTCTCAGCCGTGCCGTGTTGAGGTGGAAACCATGGAAACAGTACCAATGACTGTGAGGGCCAGCAGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000123600.5 ENSMUST00000148748.8 |
||
| 3UTR-3UTR CAA 90 bp | CTGCTCTCCTCCAATAGGTGCAAAGCAGCAAAGGGCCAAGTCTTCAGGAGCTCATGTGCCAGAGGAGCCTaGGAAGACAATGGGAGCCTT | + |
|
Preference number: 3 (lower is better) Translates to: LLSSNRCKAAKGQVFRSSCARGA*EDNGSL Trigger: AAGGCTCCCATTGTCTTCCAAGGCTCCTCTGGCACA...TGAGCTCCTGAAGACTTGGCCCTTTGCTGCTTTGCACCTATTGGAGGAGAGCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000078834.12 ENSMUST00000114833.10 ENSMUST00000128156.9 ENSMUST00000135341.8 ENSMUST00000138349.8 ENSMUST00000148748.8 |
||
| 3UTR-3UTR CAA 90 bp | GGGAAGTTGGCCTCTGTGATGAACCAGGAAGAAAGGTGGTGTCCTTCCGGACTCTTGTACTCTGGGAAGTaGGCCTCTGTGATGAACCAG | + |
|
Preference number: 3 (lower is better) Translates to: GKLASVMNQEERWCPSGLLYSGK*ASVMNQ Trigger: CTGGTTCATCACAGAGGCCAACTTCCCAGAGTACAA...GAGTCCGGAAGGACACCACCTTTCTTCCTGGTTCATCACAGAGGCCAACTTCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000078834.12 ENSMUST00000114833.10 ENSMUST00000128156.9 ENSMUST00000135341.8 ENSMUST00000138349.8 ENSMUST00000148748.8 |
||
| 3UTR GCA 72 bp | GAGGCTTTTAATGGAGACTCCCAGGAGAGCTCAGGCTaGTTGTACTCTGGGAAGTTGGCCTCTGTGATGAAC | + |
|
Preference number: 3 (lower is better) Translates to: EAFNGDSQESSG*LYSGKLASVMN Trigger: GTTCATCACAGAGGCCAACTTCCCAGAGTACAAGCAGCCTGAGCTCTCCTGGGAGTCTCCATTAAAAGCCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000078834.12 ENSMUST00000114833.10 ENSMUST00000128156.9 ENSMUST00000135341.8 ENSMUST00000138349.8 ENSMUST00000148748.8 |
||
| 3UTR-3UTR CAA 90 bp | GTTGCTGTCTTCTTTACAGACATCTCCTGTGCCAGAGGAGCCTTGGAAGACAATTGTGCCAGAGGAGCCTaGGAAGACAATGGGAGCCTT | + |
|
Preference number: 3 (lower is better) Translates to: VAVFFTDISCARGALEDNCARGA*EDNGSL Trigger: AAGGCTCCCATTGTCTTCCAAGGCTCCTCTGGCACA...ATTGTCTTCCAAGGCTCCTCTGGCACAGGAGATGTCTGTAAAGAAGACAGCAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000078834.12 ENSMUST00000114833.10 ENSMUST00000128156.9 ENSMUST00000135341.8 ENSMUST00000138349.8 ENSMUST00000148748.8 |
||
| 3UTR TCA 72 bp | GTATCTTCTCTTCAGGATCAGCTGGGCAGGTCTCCCTaGGTTTCTGAAATCGTGTGGTTAGGCTCCTGTGTC | + |
|
Preference number: 3 (lower is better) Translates to: VSSLQDQLGRSP*VSEIVWLGSCV Trigger: GACACAGGAGCCTAACCACACGATTTCAGAAACTCAGGGAGACCTGCCCAGCTGATCCTGAAGAGAAGATAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000123600.5 ENSMUST00000148748.8 |
||
| 3UTR CCA 72 bp | GTGGTTAGGCTCCTGTGTCTTCATCCTCCTTGCTGCTaGCCCTCACAGTCATTGGTACTGTTTCCATGGTTT | + |
|
Preference number: 3 (lower is better) Translates to: VVRLLCLHPPCC*PSQSLVLFPWF Trigger: AAACCATGGAAACAGTACCAATGACTGTGAGGGCCAGCAGCAAGGAGGATGAAGACACAGGAGCCTAACCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000123600.5 ENSMUST00000148748.8 |
||
| 3UTR-3UTR CAA 90 bp | AGGAGCTCAAATGTTGCTGTCTTCTTTACAGACATCTCCTGTGCCAGAGGAGCCTTGTACTCTGGGAAGTaGGCCTCTGTGATGAACCAG | + |
|
Preference number: 3 (lower is better) Translates to: RSSNVAVFFTDISCARGALYSGK*ASVMNQ Trigger: CTGGTTCATCACAGAGGCCAACTTCCCAGAGTACAA...GGCTCCTCTGGCACAGGAGATGTCTGTAAAGAAGACAGCAACATTTGAGCTCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000078834.12 ENSMUST00000114833.10 ENSMUST00000128156.9 ENSMUST00000135341.8 ENSMUST00000138349.8 ENSMUST00000148748.8 |
||
| 3UTR-3UTR CAA 90 bp | GATCATACCAGAGACCTCTATTATCACATTGGGCTTTCTCCTGTGTCCAGGCGCGAAGGCTGCCTTGATTaGATGTACCAGGCCAGGAAA | + |
|
Preference number: 3 (lower is better) Translates to: DHTRDLYYHIGLSPVSRREGCLD*MYQARK Trigger: TTTCCTGGCCTGGTACATCAAATCAAGGCAGCCTTC...GCGCCTGGACACAGGAGAAAGCCCAATGTGATAATAGAGGTCTCTGGTATGATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000123600.5 ENSMUST00000148748.8 |
||
| 3UTR GCA 72 bp | AGGGTTCATTGGCTCAGTATCTCTTCTTCTGTTCTCTaGTCTCCTCCAATAGGTGCAAAGCAGCAAAGGGCC | + |
|
Preference number: 3 (lower is better) Translates to: RVHWLSISSSVL*SPPIGAKQQRA Trigger: GGCCCTTTGCTGCTTTGCACCTATTGGAGGAGAGCAGAGAACAGAAGAAGAGATACTGAGCCAATGAACCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000078834.12 ENSMUST00000114833.10 ENSMUST00000128156.9 ENSMUST00000135341.8 ENSMUST00000138349.8 ENSMUST00000148748.8 |
||
| 3UTR GCA 72 bp | CTCAAATGTTGCTGTCTTCTTTACAGACATCTCCTGTaGCAGAGGAGCCTTGGAAGACAATGGGAGCCTTGT | + |
|
Preference number: 3 (lower is better) Translates to: LKCCCLLYRHLL*QRSLGRQWEPC Trigger: ACAAGGCTCCCATTGTCTTCCAAGGCTCCTCTGGCACAGGAGATGTCTGTAAAGAAGACAGCAACATTTGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000078834.12 ENSMUST00000114833.10 ENSMUST00000128156.9 ENSMUST00000135341.8 ENSMUST00000138349.8 ENSMUST00000148748.8 |
||
| 3UTR-3UTR CAA 90 bp | CCTCCAATAGGTGCAAAGCAGCAAAGGGCCAAGTCTTCAGGAGCTCAAATGTTGACCTCTATTATCACATaGGGCTTTCTCCTGTGTCCA | + |
|
Preference number: 3 (lower is better) Translates to: PPIGAKQQRAKSSGAQMLTSIIT*GFLLCP Trigger: TGGACACAGGAGAAAGCCCAATGTGATAATAGAGGT...CAACATTTGAGCTCCTGAAGACTTGGCCCTTTGCTGCTTTGCACCTATTGGAGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000078834.12 ENSMUST00000114833.10 ENSMUST00000128156.9 ENSMUST00000135341.8 ENSMUST00000138349.8 ENSMUST00000148748.8 |
||
| 3UTR-3UTR CAA 90 bp | GGCCAAGTCTTCAGGAGCTCAAATGTTGCTGTCTTCTTTACAGACATCTCCTGTTTGTACTCTGGGAAGTaGGCCTCTGTGATGAACCAG | + |
|
Preference number: 3 (lower is better) Translates to: GQVFRSSNVAVFFTDISCLYSGK*ASVMNQ Trigger: CTGGTTCATCACAGAGGCCAACTTCCCAGAGTACAA...ACAGGAGATGTCTGTAAAGAAGACAGCAACATTTGAGCTCCTGAAGACTTGGCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000078834.12 ENSMUST00000114833.10 ENSMUST00000128156.9 ENSMUST00000135341.8 ENSMUST00000138349.8 ENSMUST00000148748.8 |
||
| 3UTR-3UTR CAA 90 bp | TCCCACCAAAAGCAGGGCAGTGGTGGTGTGACTCTGTTTTTGAAAGAGAACCTGTCAGGAGCTCAAATGTaGCTGTCTTCTTTACAGACA | + |
|
Preference number: 3 (lower is better) Translates to: SHQKQGSGGVTLFLKENLSGAQM*LSSLQT Trigger: TGTCTGTAAAGAAGACAGCAACATTTGAGCTCCTGA...CAGGTTCTCTTTCAAAAACAGAGTCACACCACCACTGCCCTGCTTTTGGTGGGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000114833.10 ENSMUST00000138349.8 |
||
| 3UTR-3UTR CAA 90 bp | TGCTTTGAGTTAATCTCTGAGTGGAACTCGAGGCTTTTAATGGAGACTCCCAGGACCTCTATTATCACATaGGGCTTTCTCCTGTGTCCA | + |
|
Preference number: 3 (lower is better) Translates to: CFELISEWNSRLLMETPRTSIIT*GFLLCP Trigger: TGGACACAGGAGAAAGCCCAATGTGATAATAGAGGT...CCTGGGAGTCTCCATTAAAAGCCTCGAGTTCCACTCAGAGATTAACTCAAAGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000078834.12 ENSMUST00000114833.10 ENSMUST00000128156.9 ENSMUST00000135341.8 ENSMUST00000138349.8 ENSMUST00000148748.8 |
||
| 3UTR-3UTR CAA 90 bp | TTTGAGTTAATCTCTGAGTGGAACTCGAGGCTTTTAATGGAGACTCCCAGGAGATGGCCCTCACAGTCATaGGTACTGTTTCCATGGTTT | + |
|
Preference number: 3 (lower is better) Translates to: FELISEWNSRLLMETPRRWPSQS*VLFPWF Trigger: AAACCATGGAAACAGTACCAATGACTGTGAGGGCCA...TCTCCTGGGAGTCTCCATTAAAAGCCTCGAGTTCCACTCAGAGATTAACTCAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148748.8 |
||
| 3UTR-3UTR CAA 90 bp | CAAAGGGCCAAGTCTTCAGGAGCTCAAATGTTGCTGTCTTCTTTACAGACATCTACCTCTATTATCACATaGGGCTTTCTCCTGTGTCCA | + |
|
Preference number: 3 (lower is better) Translates to: QRAKSSGAQMLLSSLQTSTSIIT*GFLLCP Trigger: TGGACACAGGAGAAAGCCCAATGTGATAATAGAGGT...AGATGTCTGTAAAGAAGACAGCAACATTTGAGCTCCTGAAGACTTGGCCCTTTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000078834.12 ENSMUST00000114833.10 ENSMUST00000128156.9 ENSMUST00000135341.8 ENSMUST00000138349.8 ENSMUST00000148748.8 |
||
| 3UTR-3UTR CAA 90 bp | AGGCTCAGTAAAACAGATCATACCAGAGACCTCTATTATCACATTGGGCTTTCTGAAGGCTGCCTTGATTaGATGTACCAGGCCAGGAAA | + |
|
Preference number: 3 (lower is better) Translates to: RLSKTDHTRDLYYHIGLSEGCLD*MYQARK Trigger: TTTCCTGGCCTGGTACATCAAATCAAGGCAGCCTTC...AGAAAGCCCAATGTGATAATAGAGGTCTCTGGTATGATCTGTTTTACTGAGCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000123600.5 ENSMUST00000148748.8 |
||
| 3UTR-3UTR CAA 90 bp | AGTAAAACAGATCATACCAGAGACCTCTATTATCACATTGGGCTTTCTCCTGTGACCTCTATTATCACATaGGGCTTTCTCCTGTGTCCA | + |
|
Preference number: 3 (lower is better) Translates to: SKTDHTRDLYYHIGLSPVTSIIT*GFLLCP Trigger: TGGACACAGGAGAAAGCCCAATGTGATAATAGAGGT...CACAGGAGAAAGCCCAATGTGATAATAGAGGTCTCTGGTATGATCTGTTTTACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 9 transcripts: ENSMUST00000078834.12 ENSMUST00000114831.9 ENSMUST00000114833.10 ENSMUST00000114834.10 ENSMUST00000123600.5 ENSMUST00000128156.9 ENSMUST00000135341.8 ENSMUST00000138349.8 ENSMUST00000148748.8 |
||
| 3UTR-3UTR CAA 90 bp | CGTTGCTTCTACTCACTAGGAAATTTGGTTAAAAATCCCACCAAAAGCAGGGCATCAGGAGCTCAAATGTaGCTGTCTTCTTTACAGACA | + |
|
Preference number: 3 (lower is better) Translates to: RCFYSLGNLVKNPTKSRASGAQM*LSSLQT Trigger: TGTCTGTAAAGAAGACAGCAACATTTGAGCTCCTGA...TGCCCTGCTTTTGGTGGGATTTTTAACCAAATTTCCTAGTGAGTAGAAGCAACG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000114833.10 ENSMUST00000138349.8 |
||
| 3UTR-3UTR CAA 90 bp | GAATCCTATACGAAAGGGTTCATTGGCTCAGTATCTCTTCTTCTGTTCTCTGCTATACGAAAGGGTTCATaGGCTCAGTATCTCTTCTTC | + |
|
Preference number: 3 (lower is better) Translates to: ESYTKGFIGSVSLLLFSAIRKGS*AQYLFF Trigger: GAAGAAGAGATACTGAGCCAATGAACCCTTTCGTAT...AGCAGAGAACAGAAGAAGAGATACTGAGCCAATGAACCCTTTCGTATAGGATTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000078834.12 ENSMUST00000114833.10 ENSMUST00000128156.9 ENSMUST00000135341.8 ENSMUST00000138349.8 ENSMUST00000148748.8 |
||
| CDS-3UTR TCA 90 bp | TTGGGCTTTCTCCTGTGTCCAGGCGCAGCTGGACTAACTGCCCTTGTATCTTCTGGGGCTCTCTGGCTGTaGGGTCACCTTTGGTGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: LGFLLCPGAAGLTALVSSGALWL*GHLWCH Trigger: GTGACACCAAAGGTGACCTCACAGCCAGAGAGCCCC...AGAAGATACAAGGGCAGTTAGTCCAGCTGCGCCTGGACACAGGAGAAAGCCCAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078834.12 ENSMUST00000114831.9 ENSMUST00000114834.10 ENSMUST00000123600.5 |
||
| CDS-3UTR CCA 90 bp | CTGCTCTCCTCCAATAGGTGCAAAGCAGCAAAGGGCCAAGTCTTCAGGAGCTCAGCAGCAACACAGGAATaGCCTGGACTCCATAGCCCC | + |
|
Preference number: 4 (lower is better) Translates to: LLSSNRCKAAKGQVFRSSAATQE*PGLHSP Trigger: GGGGCTATGGAGTCCAGGCCATTCCTGTGTTGCTGC...TGAGCTCCTGAAGACTTGGCCCTTTGCTGCTTTGCACCTATTGGAGGAGAGCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078834.12 ENSMUST00000114833.10 |
||
| CDS-3UTR CCA 90 bp | ATTGGGCTTTCTCCTGTGTCCAGGCGCAGCTGGACTAACTGCCCTTGTATCTTCGCAGCAACACAGGAATaGCCTGGACTCCATAGCCCC | + |
|
Preference number: 4 (lower is better) Translates to: IGLSPVSRRSWTNCPCIFAATQE*PGLHSP Trigger: GGGGCTATGGAGTCCAGGCCATTCCTGTGTTGCTGC...GAAGATACAAGGGCAGTTAGTCCAGCTGCGCCTGGACACAGGAGAAAGCCCAAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078834.12 ENSMUST00000114831.9 ENSMUST00000114833.10 ENSMUST00000114834.10 |
||
| CDS-3UTR CCA 90 bp | CTCCCAGGAGAGCTCAGGCTGCTTGTACTCTGGGAAGTTGGCCTCTGTGATGAATGTTGCTGCAAGAGATaGGGCTCGGGAGGACTTGTG | + |
|
Preference number: 4 (lower is better) Translates to: LPGELRLLVLWEVGLCDECCCKR*GSGGLV Trigger: CACAAGTCCTCCCGAGCCCCATCTCTTGCAGCAACA...TTCATCACAGAGGCCAACTTCCCAGAGTACAAGCAGCCTGAGCTCTCCTGGGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000078834.12 ENSMUST00000128156.9 ENSMUST00000135341.8 ENSMUST00000138349.8 ENSMUST00000148748.8 |
||
| CDS-3UTR TCA 90 bp | GGGAAGTTGGCCTCTGTGATGAACCAGGAAGAAAGGTGGTGTCCTTCCGGACTCCTGAGAAGGCTGCCTTaGTTTGATGTACCAGGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: GKLASVMNQEERWCPSGLLRRLP*FDVPGQ Trigger: CTGGCCTGGTACATCAAATCAAGGCAGCCTTCTCAG...GAGTCCGGAAGGACACCACCTTTCTTCCTGGTTCATCACAGAGGCCAACTTCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000078834.12 ENSMUST00000114833.10 ENSMUST00000128156.9 ENSMUST00000135341.8 ENSMUST00000138349.8 |
||
| CDS-3UTR GCA 90 bp | GGGAAGTTGGCCTCTGTGATGAACCAGGAAGAAAGGTGGTGTCCTTCCGGACTCTGTCTTCATCCTCCTTaGTGCTGGCCCTCACAGTCA | + |
|
Preference number: 4 (lower is better) Translates to: GKLASVMNQEERWCPSGLCLHPP*CWPSQS Trigger: TGACTGTGAGGGCCAGCAGCAAGGAGGATGAAGACA...GAGTCCGGAAGGACACCACCTTTCTTCCTGGTTCATCACAGAGGCCAACTTCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000078834.12 ENSMUST00000114833.10 ENSMUST00000128156.9 ENSMUST00000135341.8 ENSMUST00000138349.8 |
||
| 3UTR CAA 72 bp | TCCCAGGAGAGCTCAGGCTGCTTGTACTCTGGGAAGTaGGCCTCTGTGATGAACCAGGAAGAAAGGTGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: SQESSGCLYSGK*ASVMNQEERWC Trigger: ACACCACCTTTCTTCCTGGTTCATCACAGAGGCCAACTTCCCAGAGTACAAGCAGCCTGAGCTCTCCTGGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000078834.12 ENSMUST00000114833.10 ENSMUST00000128156.9 ENSMUST00000135341.8 ENSMUST00000138349.8 ENSMUST00000148748.8 |
||
| CDS-3UTR TCA 90 bp | GAGCTCAAATGTTGCTGTCTTCTTTACAGACATCTCCTGTGCCAGAGGAGCCTTGGGGCTCTCTGGCTGTaGGGTCACCTTTGGTGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: ELKCCCLLYRHLLCQRSLGALWL*GHLWCH Trigger: GTGACACCAAAGGTGACCTCACAGCCAGAGAGCCCC...AAGGCTCCTCTGGCACAGGAGATGTCTGTAAAGAAGACAGCAACATTTGAGCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078834.12 |
||
| CDS-3UTR TCA 90 bp | CCTCCAATAGGTGCAAAGCAGCAAAGGGCCAAGTCTTCAGGAGCTCAAATGTTGGCTCGGGAGGACTTGTaGCTGCCTGTCCCTGTAGTT | + |
|
Preference number: 4 (lower is better) Translates to: PPIGAKQQRAKSSGAQMLAREDL*LPVPVV Trigger: AACTACAGGGACAGGCAGTCACAAGTCCTCCCGAGC...CAACATTTGAGCTCCTGAAGACTTGGCCCTTTGCTGCTTTGCACCTATTGGAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000078834.12 ENSMUST00000128156.9 ENSMUST00000135341.8 ENSMUST00000138349.8 ENSMUST00000148748.8 |
||
| CDS-3UTR GCA 90 bp | TTGGGCTTTCTCCTGTGTCCAGGCGCAGCTGGACTAACTGCCCTTGTATCTTCTCTTCATCCTCCTTGCTaGTGGCCCTCACAGTCATTG | + |
|
Preference number: 4 (lower is better) Translates to: LGFLLCPGAAGLTALVSSLHPPC*WPSQSL Trigger: CAATGACTGTGAGGGCCAGCAGCAAGGAGGATGAAG...AGAAGATACAAGGGCAGTTAGTCCAGCTGCGCCTGGACACAGGAGAAAGCCCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000078834.12 ENSMUST00000114831.9 ENSMUST00000114833.10 ENSMUST00000114834.10 ENSMUST00000128156.9 ENSMUST00000135341.8 ENSMUST00000138349.8 |
||
| CDS-3UTR CCA 90 bp | GATCATACCAGAGACCTCTATTATCACATTGGGCTTTCTCCTGTGTCCAGGCGCGCAGCAACACAGGAATaGCCTGGACTCCATAGCCCC | + |
|
Preference number: 4 (lower is better) Translates to: DHTRDLYYHIGLSPVSRRAATQE*PGLHSP Trigger: GGGGCTATGGAGTCCAGGCCATTCCTGTGTTGCTGC...GCGCCTGGACACAGGAGAAAGCCCAATGTGATAATAGAGGTCTCTGGTATGATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078834.12 ENSMUST00000114831.9 ENSMUST00000114833.10 ENSMUST00000114834.10 |
||
| CDS-3UTR CCA 90 bp | TTGGGCTTTCTCCTGTGTCCAGGCGCAGCTGGACTAACTGCCCTTGTATCTTCTCATCCTCCTTGCTGCTaGCCCTCACAGTCATTGGTA | + |
|
Preference number: 4 (lower is better) Translates to: LGFLLCPGAAGLTALVSSHPPCC*PSQSLV Trigger: TACCAATGACTGTGAGGGCCAGCAGCAAGGAGGATG...AGAAGATACAAGGGCAGTTAGTCCAGCTGCGCCTGGACACAGGAGAAAGCCCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000078834.12 ENSMUST00000114831.9 ENSMUST00000114833.10 ENSMUST00000114834.10 ENSMUST00000128156.9 ENSMUST00000135341.8 ENSMUST00000138349.8 |
||
| 3UTR CAA 72 bp | GCTTTTAATGGAGACTCCCAGGAGAGCTCAGGCTGCTaGTACTCTGGGAAGTTGGCCTCTGTGATGAACCAG | + |
|
Preference number: 4 (lower is better) Translates to: AFNGDSQESSGC*YSGKLASVMNQ Trigger: CTGGTTCATCACAGAGGCCAACTTCCCAGAGTACAAGCAGCCTGAGCTCTCCTGGGAGTCTCCATTAAAAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000078834.12 ENSMUST00000114833.10 ENSMUST00000128156.9 ENSMUST00000135341.8 ENSMUST00000138349.8 ENSMUST00000148748.8 |
||
| 3UTR CAA 72 bp | TGTCTTCATCCTCCTTGCTGCTGGCCCTCACAGTCATaGGTACTGTTTCCATGGTTTCCACCTCAACACGGC | + |
|
Preference number: 4 (lower is better) Translates to: CLHPPCCWPSQS*VLFPWFPPQHG Trigger: GCCGTGTTGAGGTGGAAACCATGGAAACAGTACCAATGACTGTGAGGGCCAGCAGCAAGGAGGATGAAGACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000123600.5 ENSMUST00000148748.8 |
||
| CDS-3UTR TCA 90 bp | GAGAGCTCAGGCTGCTTGTACTCTGGGAAGTTGGCCTCTGTGATGAACCAGGAAAAGGCTGCCTTGATTTaGTGTACCAGGCCAGGAAAG | + |
|
Preference number: 4 (lower is better) Translates to: ESSGCLYSGKLASVMNQEKAALI*CTRPGK Trigger: CTTTCCTGGCCTGGTACATCAAATCAAGGCAGCCTT...TTCCTGGTTCATCACAGAGGCCAACTTCCCAGAGTACAAGCAGCCTGAGCTCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000078834.12 ENSMUST00000114833.10 ENSMUST00000128156.9 ENSMUST00000135341.8 ENSMUST00000138349.8 |
||
| CDS-3UTR GCA 90 bp | CTTCTCTTCAGGATCAGCTGGGCAGGTCTCCCTGAGTTTCTGAAATCGTGTGGTCAAGGTCATTGTTGCTaGAAGAGATGGGGCTCGGGA | + |
|
Preference number: 4 (lower is better) Translates to: LLFRISWAGLPEFLKSCGQGHCC*KRWGSG Trigger: TCCCGAGCCCCATCTCTTGCAGCAACAATGACCTTG...ACCACACGATTTCAGAAACTCAGGGAGACCTGCCCAGCTGATCCTGAAGAGAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000123600.5 ENSMUST00000148748.8 |
||
| CDS-3UTR CCA 90 bp | CTGCTCTCCTCCAATAGGTGCAAAGCAGCAAAGGGCCAAGTCTTCAGGAGCTCACACACTCAATCAGGGTaGATGTTCCAGCTTTCCGCT | + |
|
Preference number: 4 (lower is better) Translates to: LLSSNRCKAAKGQVFRSSHTQSG*MFQLSA Trigger: AGCGGAAAGCTGGAACATCCACCCTGATTGAGTGTG...TGAGCTCCTGAAGACTTGGCCCTTTGCTGCTTTGCACCTATTGGAGGAGAGCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078834.12 ENSMUST00000114833.10 |
||
| CDS-3UTR CCA 90 bp | CTCTCCTCCAATAGGTGCAAAGCAGCAAAGGGCCAAGTCTTCAGGAGCTCAAATTGTTGCTGCAAGAGATaGGGCTCGGGAGGACTTGTG | + |
|
Preference number: 4 (lower is better) Translates to: LSSNRCKAAKGQVFRSSNCCCKR*GSGGLV Trigger: CACAAGTCCTCCCGAGCCCCATCTCTTGCAGCAACA...ATTTGAGCTCCTGAAGACTTGGCCCTTTGCTGCTTTGCACCTATTGGAGGAGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000078834.12 ENSMUST00000128156.9 ENSMUST00000135341.8 ENSMUST00000138349.8 ENSMUST00000148748.8 |
||
| CDS-3UTR CCA 90 bp | GATCATACCAGAGACCTCTATTATCACATTGGGCTTTCTCCTGTGTCCAGGCGCTGTTGCTGCAAGAGATaGGGCTCGGGAGGACTTGTG | + |
|
Preference number: 4 (lower is better) Translates to: DHTRDLYYHIGLSPVSRRCCCKR*GSGGLV Trigger: CACAAGTCCTCCCGAGCCCCATCTCTTGCAGCAACA...GCGCCTGGACACAGGAGAAAGCCCAATGTGATAATAGAGGTCTCTGGTATGATC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000078834.12 ENSMUST00000114831.9 ENSMUST00000123600.5 ENSMUST00000128156.9 ENSMUST00000135341.8 ENSMUST00000138349.8 ENSMUST00000148748.8 |
||
| CDS-3UTR CCA 90 bp | CCTCCAATAGGTGCAAAGCAGCAAAGGGCCAAGTCTTCAGGAGCTCAAATGTTGTGTTGCTGCAAGAGATaGGGCTCGGGAGGACTTGTG | + |
|
Preference number: 4 (lower is better) Translates to: PPIGAKQQRAKSSGAQMLCCCKR*GSGGLV Trigger: CACAAGTCCTCCCGAGCCCCATCTCTTGCAGCAACA...CAACATTTGAGCTCCTGAAGACTTGGCCCTTTGCTGCTTTGCACCTATTGGAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000078834.12 ENSMUST00000128156.9 ENSMUST00000135341.8 ENSMUST00000138349.8 ENSMUST00000148748.8 |
||
| CDS-3UTR CCA 90 bp | AACTCGAGGCTTTTAATGGAGACTCCCAGGAGAGCTCAGGCTGCTTGTACTCTGCATCCTCCTTGCTGCTaGCCCTCACAGTCATTGGTA | + |
|
Preference number: 4 (lower is better) Translates to: NSRLLMETPRRAQAACTLHPPCC*PSQSLV Trigger: TACCAATGACTGTGAGGGCCAGCAGCAAGGAGGATG...CAGAGTACAAGCAGCCTGAGCTCTCCTGGGAGTCTCCATTAAAAGCCTCGAGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000078834.12 ENSMUST00000114833.10 ENSMUST00000128156.9 ENSMUST00000135341.8 ENSMUST00000138349.8 |
||
| CDS-3UTR TCA 90 bp | AACAGATCATACCAGAGACCTCTATTATCACATTGGGCTTTCTCCTGTGTCCAGGGGGCTCTCTGGCTGTaGGGTCACCTTTGGTGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: NRSYQRPLLSHWAFSCVQGALWL*GHLWCH Trigger: GTGACACCAAAGGTGACCTCACAGCCAGAGAGCCCC...CTGGACACAGGAGAAAGCCCAATGTGATAATAGAGGTCTCTGGTATGATCTGTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000078834.12 ENSMUST00000114831.9 ENSMUST00000114834.10 ENSMUST00000123600.5 |
||
| CDS-3UTR TCA 90 bp | GCTCAAATGTTGCTGTCTTCTTTACAGACATCTCCTGTGCCAGAGGAGCCTTGGCTGAGAAGGCTGCCTTaGTTTGATGTACCAGGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: AQMLLSSLQTSPVPEEPWLRRLP*FDVPGQ Trigger: CTGGCCTGGTACATCAAATCAAGGCAGCCTTCTCAG...CCAAGGCTCCTCTGGCACAGGAGATGTCTGTAAAGAAGACAGCAACATTTGAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000078834.12 ENSMUST00000114833.10 ENSMUST00000128156.9 ENSMUST00000135341.8 ENSMUST00000138349.8 |
||
| CDS-3UTR TCA 90 bp | TCATACCAGAGACCTCTATTATCACATTGGGCTTTCTCCTGTGTCCAGGCGCAGCTGAGAAGGCTGCCTTaGTTTGATGTACCAGGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: SYQRPLLSHWAFSCVQAQLRRLP*FDVPGQ Trigger: CTGGCCTGGTACATCAAATCAAGGCAGCCTTCTCAG...CTGCGCCTGGACACAGGAGAAAGCCCAATGTGATAATAGAGGTCTCTGGTATGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000078834.12 ENSMUST00000114831.9 ENSMUST00000114833.10 ENSMUST00000114834.10 ENSMUST00000128156.9 ENSMUST00000135341.8 ENSMUST00000138349.8 |
||
| CDS-3UTR TCA 90 bp | AGGAGCTCAAATGTTGCTGTCTTCTTTACAGACATCTCCTGTGCCAGAGGAGCCCTGAGAAGGCTGCCTTaGTTTGATGTACCAGGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: RSSNVAVFFTDISCARGALRRLP*FDVPGQ Trigger: CTGGCCTGGTACATCAAATCAAGGCAGCCTTCTCAG...GGCTCCTCTGGCACAGGAGATGTCTGTAAAGAAGACAGCAACATTTGAGCTCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000078834.12 ENSMUST00000114833.10 ENSMUST00000128156.9 ENSMUST00000135341.8 ENSMUST00000138349.8 |
||
| CDS-3UTR GCA 90 bp | GATCATACCAGAGACCTCTATTATCACATTGGGCTTTCTCCTGTGTCCAGGCGCCAAGGTCATTGTTGCTaGAAGAGATGGGGCTCGGGA | + |
|
Preference number: 4 (lower is better) Translates to: DHTRDLYYHIGLSPVSRRQGHCC*KRWGSG Trigger: TCCCGAGCCCCATCTCTTGCAGCAACAATGACCTTG...GCGCCTGGACACAGGAGAAAGCCCAATGTGATAATAGAGGTCTCTGGTATGATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000078834.12 ENSMUST00000114831.9 ENSMUST00000123600.5 ENSMUST00000128156.9 ENSMUST00000135341.8 ENSMUST00000138349.8 ENSMUST00000148748.8 |
||
| CDS-3UTR GCA 90 bp | TCATACCAGAGACCTCTATTATCACATTGGGCTTTCTCCTGTGTCCAGGCGCAGCTTCATCCTCCTTGCTaGTGGCCCTCACAGTCATTG | + |
|
Preference number: 4 (lower is better) Translates to: SYQRPLLSHWAFSCVQAQLHPPC*WPSQSL Trigger: CAATGACTGTGAGGGCCAGCAGCAAGGAGGATGAAG...CTGCGCCTGGACACAGGAGAAAGCCCAATGTGATAATAGAGGTCTCTGGTATGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000078834.12 ENSMUST00000114831.9 ENSMUST00000114833.10 ENSMUST00000114834.10 ENSMUST00000128156.9 ENSMUST00000135341.8 ENSMUST00000138349.8 |
||
| CDS-3UTR GCA 90 bp | CCAATAGGTGCAAAGCAGCAAAGGGCCAAGTCTTCAGGAGCTCAAATGTTGCTGCTTCATCCTCCTTGCTaGTGGCCCTCACAGTCATTG | + |
|
Preference number: 4 (lower is better) Translates to: PIGAKQQRAKSSGAQMLLLHPPC*WPSQSL Trigger: CAATGACTGTGAGGGCCAGCAGCAAGGAGGATGAAG...CAGCAACATTTGAGCTCCTGAAGACTTGGCCCTTTGCTGCTTTGCACCTATTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000078834.12 ENSMUST00000114833.10 ENSMUST00000128156.9 ENSMUST00000135341.8 ENSMUST00000138349.8 |
||
| CDS-3UTR GCA 90 bp | GGTGCAAAGCAGCAAAGGGCCAAGTCTTCAGGAGCTCAAATGTTGCTGTCTTCTCTTCATCCTCCTTGCTaGTGGCCCTCACAGTCATTG | + |
|
Preference number: 4 (lower is better) Translates to: GAKQQRAKSSGAQMLLSSLHPPC*WPSQSL Trigger: CAATGACTGTGAGGGCCAGCAGCAAGGAGGATGAAG...AGAAGACAGCAACATTTGAGCTCCTGAAGACTTGGCCCTTTGCTGCTTTGCACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000078834.12 ENSMUST00000114833.10 ENSMUST00000128156.9 ENSMUST00000135341.8 ENSMUST00000138349.8 |
||
| CDS-3UTR GCA 90 bp | TCATACCAGAGACCTCTATTATCACATTGGGCTTTCTCCTGTGTCCAGGCGCAGTGTCTTCATCCTCCTTaGTGCTGGCCCTCACAGTCA | + |
|
Preference number: 4 (lower is better) Translates to: SYQRPLLSHWAFSCVQAQCLHPP*CWPSQS Trigger: TGACTGTGAGGGCCAGCAGCAAGGAGGATGAAGACA...CTGCGCCTGGACACAGGAGAAAGCCCAATGTGATAATAGAGGTCTCTGGTATGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000078834.12 ENSMUST00000114831.9 ENSMUST00000114833.10 ENSMUST00000114834.10 ENSMUST00000128156.9 ENSMUST00000135341.8 ENSMUST00000138349.8 |
||
| CDS-3UTR CCA 90 bp | TGCTTTGAGTTAATCTCTGAGTGGAACTCGAGGCTTTTAATGGAGACTCCCAGGGCAGCAACACAGGAATaGCCTGGACTCCATAGCCCC | + |
|
Preference number: 4 (lower is better) Translates to: CFELISEWNSRLLMETPRAATQE*PGLHSP Trigger: GGGGCTATGGAGTCCAGGCCATTCCTGTGTTGCTGC...CCTGGGAGTCTCCATTAAAAGCCTCGAGTTCCACTCAGAGATTAACTCAAAGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000078834.12 ENSMUST00000114833.10 |
||
| CDS-3UTR CCA 90 bp | TCCCACCAAAAGCAGGGCAGTGGTGGTGTGACTCTGTTTTTGAAAGAGAACCTGCCTGCAGAAGTTGTTTaGGATGGTGTCAGCCTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: SHQKQGSGGVTLFLKENLPAEVV*DGVSLE Trigger: CTCCAGGCTGACACCATCCCAAACAACTTCTGCAGG...CAGGTTCTCTTTCAAAAACAGAGTCACACCACCACTGCCCTGCTTTTGGTGGGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000138349.8 |
||
| CDS-3UTR CCA 90 bp | TGTTGCTGTCTTCTTTACAGACATCTCCTGTGCCAGAGGAGCCTTGGAAGACAATGTTGCTGCAAGAGATaGGGCTCGGGAGGACTTGTG | + |
|
Preference number: 4 (lower is better) Translates to: CCCLLYRHLLCQRSLGRQCCCKR*GSGGLV Trigger: CACAAGTCCTCCCGAGCCCCATCTCTTGCAGCAACA...TTGTCTTCCAAGGCTCCTCTGGCACAGGAGATGTCTGTAAAGAAGACAGCAACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000078834.12 ENSMUST00000128156.9 ENSMUST00000135341.8 ENSMUST00000138349.8 ENSMUST00000148748.8 |
||
| CDS-3UTR CCA 90 bp | CCAATAGGTGCAAAGCAGCAAAGGGCCAAGTCTTCAGGAGCTCAAATGTTGCTGCATCCTCCTTGCTGCTaGCCCTCACAGTCATTGGTA | + |
|
Preference number: 4 (lower is better) Translates to: PIGAKQQRAKSSGAQMLLHPPCC*PSQSLV Trigger: TACCAATGACTGTGAGGGCCAGCAGCAAGGAGGATG...CAGCAACATTTGAGCTCCTGAAGACTTGGCCCTTTGCTGCTTTGCACCTATTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000078834.12 ENSMUST00000114833.10 ENSMUST00000128156.9 ENSMUST00000135341.8 ENSMUST00000138349.8 |
||
| CDS-3UTR TCA 90 bp | GCTCAAATGTTGCTGTCTTCTTTACAGACATCTCCTGTGCCAGAGGAGCCTTGGAAGGCTGCCTTGATTTaGTGTACCAGGCCAGGAAAG | + |
|
Preference number: 4 (lower is better) Translates to: AQMLLSSLQTSPVPEEPWKAALI*CTRPGK Trigger: CTTTCCTGGCCTGGTACATCAAATCAAGGCAGCCTT...CCAAGGCTCCTCTGGCACAGGAGATGTCTGTAAAGAAGACAGCAACATTTGAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000078834.12 ENSMUST00000114833.10 ENSMUST00000128156.9 ENSMUST00000135341.8 ENSMUST00000138349.8 |
||
| CDS-3UTR TCA 90 bp | TGTTGCTGTCTTCTTTACAGACATCTCCTGTGCCAGAGGAGCCTTGGAAGACAACTGAGAAGGCTGCCTTaGTTTGATGTACCAGGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: CCCLLYRHLLCQRSLGRQLRRLP*FDVPGQ Trigger: CTGGCCTGGTACATCAAATCAAGGCAGCCTTCTCAG...TTGTCTTCCAAGGCTCCTCTGGCACAGGAGATGTCTGTAAAGAAGACAGCAACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000078834.12 ENSMUST00000114833.10 ENSMUST00000128156.9 ENSMUST00000135341.8 ENSMUST00000138349.8 |
||
| CDS-3UTR GCA 90 bp | TGTTGCTGTCTTCTTTACAGACATCTCCTGTGCCAGAGGAGCCTTGGAAGACAACAAGGTCATTGTTGCTaGAAGAGATGGGGCTCGGGA | + |
|
Preference number: 4 (lower is better) Translates to: CCCLLYRHLLCQRSLGRQQGHCC*KRWGSG Trigger: TCCCGAGCCCCATCTCTTGCAGCAACAATGACCTTG...TTGTCTTCCAAGGCTCCTCTGGCACAGGAGATGTCTGTAAAGAAGACAGCAACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000078834.12 ENSMUST00000128156.9 ENSMUST00000135341.8 ENSMUST00000138349.8 ENSMUST00000148748.8 |
||
| CDS-3UTR GCA 90 bp | GAGCTCAAATGTTGCTGTCTTCTTTACAGACATCTCCTGTGCCAGAGGAGCCTTCAAGGTCATTGTTGCTaGAAGAGATGGGGCTCGGGA | + |
|
Preference number: 4 (lower is better) Translates to: ELKCCCLLYRHLLCQRSLQGHCC*KRWGSG Trigger: TCCCGAGCCCCATCTCTTGCAGCAACAATGACCTTG...AAGGCTCCTCTGGCACAGGAGATGTCTGTAAAGAAGACAGCAACATTTGAGCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000078834.12 ENSMUST00000128156.9 ENSMUST00000135341.8 ENSMUST00000138349.8 ENSMUST00000148748.8 |
||
| CDS-3UTR GCA 90 bp | TGTTGCTGTCTTCTTTACAGACATCTCCTGTGCCAGAGGAGCCTTGGAAGACAACTTCATCCTCCTTGCTaGTGGCCCTCACAGTCATTG | + |
|
Preference number: 4 (lower is better) Translates to: CCCLLYRHLLCQRSLGRQLHPPC*WPSQSL Trigger: CAATGACTGTGAGGGCCAGCAGCAAGGAGGATGAAG...TTGTCTTCCAAGGCTCCTCTGGCACAGGAGATGTCTGTAAAGAAGACAGCAACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000078834.12 ENSMUST00000114833.10 ENSMUST00000128156.9 ENSMUST00000135341.8 ENSMUST00000138349.8 |
||
| CDS-3UTR CCA 90 bp | TTGGGCTTTCTCCTGTGTCCAGGCGCAGCTGGACTAACTGCCCTTGTATCTTCTTTGCGGTATCTGATTTaGGAGAGAAAGCTTCTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: LGFLLCPGAAGLTALVSSLRYLI*ERKLLA Trigger: AGCCAGAAGCTTTCTCTCCCAAATCAGATACCGCAA...AGAAGATACAAGGGCAGTTAGTCCAGCTGCGCCTGGACACAGGAGAAAGCCCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078834.12 ENSMUST00000123600.5 |
||
| CDS-3UTR CCA 90 bp | TGGAGACTCCCAGGAGAGCTCAGGCTGCTTGTACTCTGGGAAGTTGGCCTCTGTGTCATTTTGGAACTGTaGGGAGAAATCTCTGTTATC | + |
|
Preference number: 4 (lower is better) Translates to: WRLPGELRLLVLWEVGLCVILEL*GEISVI Trigger: GATAACAGAGATTTCTCCCCACAGTTCCAAAATGAC...ACAGAGGCCAACTTCCCAGAGTACAAGCAGCCTGAGCTCTCCTGGGAGTCTCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000078834.12 ENSMUST00000128156.9 ENSMUST00000135341.8 ENSMUST00000138349.8 ENSMUST00000148748.8 |
||
| CDS-3UTR CCA 90 bp | AATGGAGACTCCCAGGAGAGCTCAGGCTGCTTGTACTCTGGGAAGTTGGCCTCTCCACTTTCGTCATTTTaGAACTGTGGGGAGAAATCT | + |
|
Preference number: 4 (lower is better) Translates to: NGDSQESSGCLYSGKLASPLSSF*NCGEKS Trigger: AGATTTCTCCCCACAGTTCCAAAATGACGAAAGTGG...AGAGGCCAACTTCCCAGAGTACAAGCAGCCTGAGCTCTCCTGGGAGTCTCCATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000078834.12 ENSMUST00000114833.10 ENSMUST00000128156.9 ENSMUST00000135341.8 ENSMUST00000138349.8 |
||
| CDS-3UTR TCA 90 bp | AGGCTCAGTAAAACAGATCATACCAGAGACCTCTATTATCACATTGGGCTTTCTGGGGCTCTCTGGCTGTaGGGTCACCTTTGGTGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: RLSKTDHTRDLYYHIGLSGALWL*GHLWCH Trigger: GTGACACCAAAGGTGACCTCACAGCCAGAGAGCCCC...AGAAAGCCCAATGTGATAATAGAGGTCTCTGGTATGATCTGTTTTACTGAGCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000078834.12 ENSMUST00000114831.9 ENSMUST00000114834.10 ENSMUST00000123600.5 |
||
| CDS-3UTR TCA 90 bp | TGTTGCTGTCTTCTTTACAGACATCTCCTGTGCCAGAGGAGCCTTGGAAGACAAAAGGCTGCCTTGATTTaGTGTACCAGGCCAGGAAAG | + |
|
Preference number: 4 (lower is better) Translates to: CCCLLYRHLLCQRSLGRQKAALI*CTRPGK Trigger: CTTTCCTGGCCTGGTACATCAAATCAAGGCAGCCTT...TTGTCTTCCAAGGCTCCTCTGGCACAGGAGATGTCTGTAAAGAAGACAGCAACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000078834.12 ENSMUST00000114833.10 ENSMUST00000128156.9 ENSMUST00000135341.8 ENSMUST00000138349.8 |
||
| CDS-3UTR CCA 90 bp | CTGCTCTCCTCCAATAGGTGCAAAGCAGCAAAGGGCCAAGTCTTCAGGAGCTCAAGACATACCTCTCCCTaGAGTTCACACTGTAATTCT | + |
|
Preference number: 4 (lower is better) Translates to: LLSSNRCKAAKGQVFRSSRHTSP*SSHCNS Trigger: AGAATTACAGTGTGAACTCCAGGGAGAGGTATGTCT...TGAGCTCCTGAAGACTTGGCCCTTTGCTGCTTTGCACCTATTGGAGGAGAGCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078834.12 ENSMUST00000114833.10 |
||
| CDS-3UTR CCA 90 bp | ATGTTGCTGTCTTCTTTACAGACATCTCCTGTGCCAGAGGAGCCTTGGAAGACACACACTCAATCAGGGTaGATGTTCCAGCTTTCCGCT | + |
|
Preference number: 4 (lower is better) Translates to: MLLSSLQTSPVPEEPWKTHTQSG*MFQLSA Trigger: AGCGGAAAGCTGGAACATCCACCCTGATTGAGTGTG...TGTCTTCCAAGGCTCCTCTGGCACAGGAGATGTCTGTAAAGAAGACAGCAACAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078834.12 ENSMUST00000114833.10 |
||
| CDS-3UTR CCA 90 bp | GGCCAAGTCTTCAGGAGCTCAAATGTTGCTGTCTTCTTTACAGACATCTCCTGTCCTGCAGAAGTTGTTTaGGATGGTGTCAGCCTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: GQVFRSSNVAVFFTDISCPAEVV*DGVSLE Trigger: CTCCAGGCTGACACCATCCCAAACAACTTCTGCAGG...ACAGGAGATGTCTGTAAAGAAGACAGCAACATTTGAGCTCCTGAAGACTTGGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000078834.12 ENSMUST00000128156.9 ENSMUST00000135341.8 ENSMUST00000138349.8 ENSMUST00000148748.8 |
||
| CDS-3UTR CCA 90 bp | AACAGATCATACCAGAGACCTCTATTATCACATTGGGCTTTCTCCTGTGTCCAGTGTTGCTGCAAGAGATaGGGCTCGGGAGGACTTGTG | + |
|
Preference number: 4 (lower is better) Translates to: NRSYQRPLLSHWAFSCVQCCCKR*GSGGLV Trigger: CACAAGTCCTCCCGAGCCCCATCTCTTGCAGCAACA...CTGGACACAGGAGAAAGCCCAATGTGATAATAGAGGTCTCTGGTATGATCTGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000078834.12 ENSMUST00000114831.9 ENSMUST00000123600.5 ENSMUST00000128156.9 ENSMUST00000135341.8 ENSMUST00000138349.8 ENSMUST00000148748.8 |
||
| CDS-3UTR CCA 90 bp | CAAAGGGCCAAGTCTTCAGGAGCTCAAATGTTGCTGTCTTCTTTACAGACATCTTGTTGCTGCAAGAGATaGGGCTCGGGAGGACTTGTG | + |
|
Preference number: 4 (lower is better) Translates to: QRAKSSGAQMLLSSLQTSCCCKR*GSGGLV Trigger: CACAAGTCCTCCCGAGCCCCATCTCTTGCAGCAACA...AGATGTCTGTAAAGAAGACAGCAACATTTGAGCTCCTGAAGACTTGGCCCTTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000078834.12 ENSMUST00000128156.9 ENSMUST00000135341.8 ENSMUST00000138349.8 ENSMUST00000148748.8 |
||
| CDS-3UTR CCA 90 bp | AACCAGGAAGAAAGGTGGTGTCCTTCCGGACTCCGGGGATCCAGGCCTGAATATGTCATTTTGGAACTGTaGGGAGAAATCTCTGTTATC | + |
|
Preference number: 4 (lower is better) Translates to: NQEERWCPSGLRGSRPEYVILEL*GEISVI Trigger: GATAACAGAGATTTCTCCCCACAGTTCCAAAATGAC...ATATTCAGGCCTGGATCCCCGGAGTCCGGAAGGACACCACCTTTCTTCCTGGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000078834.12 ENSMUST00000128156.9 ENSMUST00000135341.8 ENSMUST00000138349.8 ENSMUST00000148748.8 |
||
| CDS-3UTR CCA 90 bp | CCAATAGGTGCAAAGCAGCAAAGGGCCAAGTCTTCAGGAGCTCAAATGTTGCTGTTGGTACTGTTTCCATaGTTTCCACCTCAACACGGC | + |
|
Preference number: 4 (lower is better) Translates to: PIGAKQQRAKSSGAQMLLLVLFP*FPPQHG Trigger: GCCGTGTTGAGGTGGAAACCATGGAAACAGTACCAA...CAGCAACATTTGAGCTCCTGAAGACTTGGCCCTTTGCTGCTTTGCACCTATTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000078834.12 ENSMUST00000114833.10 ENSMUST00000128156.9 ENSMUST00000135341.8 ENSMUST00000138349.8 |
||
| CDS-3UTR CCA 90 bp | TTGGGCTTTCTCCTGTGTCCAGGCGCAGCTGGACTAACTGCCCTTGTATCTTCTTGGCTTTCGTCATTTTaGAACTGTGGGGAGAAATCT | + |
|
Preference number: 4 (lower is better) Translates to: LGFLLCPGAAGLTALVSSWLSSF*NCGEKS Trigger: AGATTTCTCCCCACAGTTCCAAAATGACGAAAGCCA...AGAAGATACAAGGGCAGTTAGTCCAGCTGCGCCTGGACACAGGAGAAAGCCCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000123600.5 ENSMUST00000148748.8 |
||
| 3UTR CAA 72 bp | AAGCAGCAAAGGGCCAAGTCTTCAGGAGCTCAAATGTaGCTGTCTTCTTTACAGACATCTCCTGTGCCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: KQQRAKSSGAQM*LSSLQTSPVPE Trigger: CTCTGGCACAGGAGATGTCTGTAAAGAAGACAGCAACATTTGAGCTCCTGAAGACTTGGCCCTTTGCTGCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000078834.12 ENSMUST00000114833.10 ENSMUST00000128156.9 ENSMUST00000135341.8 ENSMUST00000138349.8 ENSMUST00000148748.8 |
||
| CDS-3UTR GCA 90 bp | TACTCACTAGGAAATTTGGTTAAAAATCCCACCAAAAGCAGGGCAGTGGTGGTGTGTCTTCATCCTCCTTaGTGCTGGCCCTCACAGTCA | + |
|
Preference number: 4 (lower is better) Translates to: YSLGNLVKNPTKSRAVVVCLHPP*CWPSQS Trigger: TGACTGTGAGGGCCAGCAGCAAGGAGGATGAAGACA...CACCACCACTGCCCTGCTTTTGGTGGGATTTTTAACCAAATTTCCTAGTGAGTA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000114833.10 ENSMUST00000138349.8 |
||
| CDS-3UTR CCA 90 bp | CAAAGGGCCAAGTCTTCAGGAGCTCAAATGTTGCTGTCTTCTTTACAGACATCTCCTGCAGAAGTTGTTTaGGATGGTGTCAGCCTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: QRAKSSGAQMLLSSLQTSPAEVV*DGVSLE Trigger: CTCCAGGCTGACACCATCCCAAACAACTTCTGCAGG...AGATGTCTGTAAAGAAGACAGCAACATTTGAGCTCCTGAAGACTTGGCCCTTTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000078834.12 ENSMUST00000128156.9 ENSMUST00000135341.8 ENSMUST00000138349.8 ENSMUST00000148748.8 |
||
| CDS-3UTR CCA 90 bp | TTTGAGTTAATCTCTGAGTGGAACTCGAGGCTTTTAATGGAGACTCCCAGGAGACCTGCAGAAGTTGTTTaGGATGGTGTCAGCCTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: FELISEWNSRLLMETPRRPAEVV*DGVSLE Trigger: CTCCAGGCTGACACCATCCCAAACAACTTCTGCAGG...TCTCCTGGGAGTCTCCATTAAAAGCCTCGAGTTCCACTCAGAGATTAACTCAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000078834.12 ENSMUST00000128156.9 ENSMUST00000135341.8 ENSMUST00000138349.8 ENSMUST00000148748.8 |
||
| CDS-3UTR CCA 90 bp | ATTGGGCTTTCTCCTGTGTCCAGGCGCAGCTGGACTAACTGCCCTTGTATCTTCGTCATTTTGGAACTGTaGGGAGAAATCTCTGTTATC | + |
|
Preference number: 4 (lower is better) Translates to: IGLSPVSRRSWTNCPCIFVILEL*GEISVI Trigger: GATAACAGAGATTTCTCCCCACAGTTCCAAAATGAC...GAAGATACAAGGGCAGTTAGTCCAGCTGCGCCTGGACACAGGAGAAAGCCCAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000078834.12 ENSMUST00000114831.9 ENSMUST00000123600.5 ENSMUST00000128156.9 ENSMUST00000135341.8 ENSMUST00000138349.8 ENSMUST00000148748.8 |
||
| CDS-3UTR CCA 90 bp | TGTTGCTGTCTTCTTTACAGACATCTCCTGTGCCAGAGGAGCCTTGGAAGACAATTGGTACTGTTTCCATaGTTTCCACCTCAACACGGC | + |
|
Preference number: 4 (lower is better) Translates to: CCCLLYRHLLCQRSLGRQLVLFP*FPPQHG Trigger: GCCGTGTTGAGGTGGAAACCATGGAAACAGTACCAA...TTGTCTTCCAAGGCTCCTCTGGCACAGGAGATGTCTGTAAAGAAGACAGCAACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000078834.12 ENSMUST00000114833.10 ENSMUST00000128156.9 ENSMUST00000135341.8 ENSMUST00000138349.8 |
||
| CDS-3UTR CCA 90 bp | AACAGATCATACCAGAGACCTCTATTATCACATTGGGCTTTCTCCTGTGTCCAGCATCCTCCTTGCTGCTaGCCCTCACAGTCATTGGTA | + |
|
Preference number: 4 (lower is better) Translates to: NRSYQRPLLSHWAFSCVQHPPCC*PSQSLV Trigger: TACCAATGACTGTGAGGGCCAGCAGCAAGGAGGATG...CTGGACACAGGAGAAAGCCCAATGTGATAATAGAGGTCTCTGGTATGATCTGTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000078834.12 ENSMUST00000114831.9 ENSMUST00000114833.10 ENSMUST00000114834.10 ENSMUST00000128156.9 ENSMUST00000135341.8 ENSMUST00000138349.8 |
||
| CDS-3UTR CCA 90 bp | CAAAGGGCCAAGTCTTCAGGAGCTCAAATGTTGCTGTCTTCTTTACAGACATCTCATCCTCCTTGCTGCTaGCCCTCACAGTCATTGGTA | + |
|
Preference number: 4 (lower is better) Translates to: QRAKSSGAQMLLSSLQTSHPPCC*PSQSLV Trigger: TACCAATGACTGTGAGGGCCAGCAGCAAGGAGGATG...AGATGTCTGTAAAGAAGACAGCAACATTTGAGCTCCTGAAGACTTGGCCCTTTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000078834.12 ENSMUST00000114833.10 ENSMUST00000128156.9 ENSMUST00000135341.8 ENSMUST00000138349.8 |
||
| CDS-3UTR CCA 90 bp | TTTGAGTTAATCTCTGAGTGGAACTCGAGGCTTTTAATGGAGACTCCCAGGAGACATCCTCCTTGCTGCTaGCCCTCACAGTCATTGGTA | + |
|
Preference number: 4 (lower is better) Translates to: FELISEWNSRLLMETPRRHPPCC*PSQSLV Trigger: TACCAATGACTGTGAGGGCCAGCAGCAAGGAGGATG...TCTCCTGGGAGTCTCCATTAAAAGCCTCGAGTTCCACTCAGAGATTAACTCAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000078834.12 ENSMUST00000114833.10 ENSMUST00000128156.9 ENSMUST00000135341.8 ENSMUST00000138349.8 |
||
| CDS-3UTR TCA 90 bp | CAAAGGGCCAAGTCTTCAGGAGCTCAAATGTTGCTGTCTTCTTTACAGACATCTAAGGCTGCCTTGATTTaGTGTACCAGGCCAGGAAAG | + |
|
Preference number: 4 (lower is better) Translates to: QRAKSSGAQMLLSSLQTSKAALI*CTRPGK Trigger: CTTTCCTGGCCTGGTACATCAAATCAAGGCAGCCTT...AGATGTCTGTAAAGAAGACAGCAACATTTGAGCTCCTGAAGACTTGGCCCTTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000078834.12 ENSMUST00000114833.10 ENSMUST00000128156.9 ENSMUST00000135341.8 ENSMUST00000138349.8 |
||
| CDS-3UTR GCA 90 bp | AAACAGATCATACCAGAGACCTCTATTATCACATTGGGCTTTCTCCTGTGTCCACTTCATCCTCCTTGCTaGTGGCCCTCACAGTCATTG | + |
|
Preference number: 4 (lower is better) Translates to: KQIIPETSIITLGFLLCPLHPPC*WPSQSL Trigger: CAATGACTGTGAGGGCCAGCAGCAAGGAGGATGAAG...TGGACACAGGAGAAAGCCCAATGTGATAATAGAGGTCTCTGGTATGATCTGTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000078834.12 ENSMUST00000114831.9 ENSMUST00000114833.10 ENSMUST00000114834.10 ENSMUST00000128156.9 ENSMUST00000135341.8 ENSMUST00000138349.8 |
||
| CDS-3UTR GCA 90 bp | GGGAGCCTTGTCAATCTCTGTAAACTGCAAGTCAGAGTAGGGAATAGAAAAAGATGTCTTCATCCTCCTTaGTGCTGGCCCTCACAGTCA | + |
|
Preference number: 4 (lower is better) Translates to: GSLVNLCKLQVRVGNRKRCLHPP*CWPSQS Trigger: TGACTGTGAGGGCCAGCAGCAAGGAGGATGAAGACA...TCTTTTTCTATTCCCTACTCTGACTTGCAGTTTACAGAGATTGACAAGGCTCCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000078834.12 ENSMUST00000114833.10 ENSMUST00000128156.9 ENSMUST00000135341.8 ENSMUST00000138349.8 |
||
| CDS-3UTR GCA 90 bp | AAAACAGATCATACCAGAGACCTCTATTATCACATTGGGCTTTCTCCTGTGTCCTGTCTTCATCCTCCTTaGTGCTGGCCCTCACAGTCA | + |
|
Preference number: 4 (lower is better) Translates to: KTDHTRDLYYHIGLSPVSCLHPP*CWPSQS Trigger: TGACTGTGAGGGCCAGCAGCAAGGAGGATGAAGACA...GGACACAGGAGAAAGCCCAATGTGATAATAGAGGTCTCTGGTATGATCTGTTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000078834.12 ENSMUST00000114831.9 ENSMUST00000114833.10 ENSMUST00000114834.10 ENSMUST00000128156.9 ENSMUST00000135341.8 ENSMUST00000138349.8 |
||
| CDS-3UTR GCA 90 bp | AAACAGATCATACCAGAGACCTCTATTATCACATTGGGCTTTCTCCTGTGTCCATGTCTTCATCCTCCTTaGTGCTGGCCCTCACAGTCA | + |
|
Preference number: 4 (lower is better) Translates to: KQIIPETSIITLGFLLCPCLHPP*CWPSQS Trigger: TGACTGTGAGGGCCAGCAGCAAGGAGGATGAAGACA...TGGACACAGGAGAAAGCCCAATGTGATAATAGAGGTCTCTGGTATGATCTGTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000078834.12 ENSMUST00000114831.9 ENSMUST00000114833.10 ENSMUST00000114834.10 ENSMUST00000128156.9 ENSMUST00000135341.8 ENSMUST00000138349.8 |
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| CDS-3UTR CCA 90 bp | GATCATACCAGAGACCTCTATTATCACATTGGGCTTTCTCCTGTGTCCAGGCGCCCACTTTCGTCATTTTaGAACTGTGGGGAGAAATCT | + |
|
Preference number: 4 (lower is better) Translates to: DHTRDLYYHIGLSPVSRRPLSSF*NCGEKS Trigger: AGATTTCTCCCCACAGTTCCAAAATGACGAAAGTGG...GCGCCTGGACACAGGAGAAAGCCCAATGTGATAATAGAGGTCTCTGGTATGATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000078834.12 ENSMUST00000114831.9 ENSMUST00000114833.10 ENSMUST00000114834.10 ENSMUST00000128156.9 ENSMUST00000135341.8 ENSMUST00000138349.8 |
||
| CDS-3UTR TCA 90 bp | GGGAGCCTTGTCAATCTCTGTAAACTGCAAGTCAGAGTAGGGAATAGAAAAAGAAAGGCTGCCTTGATTTaGTGTACCAGGCCAGGAAAG | + |
|
Preference number: 4 (lower is better) Translates to: GSLVNLCKLQVRVGNRKRKAALI*CTRPGK Trigger: CTTTCCTGGCCTGGTACATCAAATCAAGGCAGCCTT...TCTTTTTCTATTCCCTACTCTGACTTGCAGTTTACAGAGATTGACAAGGCTCCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000078834.12 ENSMUST00000114833.10 ENSMUST00000128156.9 ENSMUST00000135341.8 ENSMUST00000138349.8 |
||
| CDS-3UTR TCA 90 bp | AAAACAGATCATACCAGAGACCTCTATTATCACATTGGGCTTTCTCCTGTGTCCAAGGCTGCCTTGATTTaGTGTACCAGGCCAGGAAAG | + |
|
Preference number: 4 (lower is better) Translates to: KTDHTRDLYYHIGLSPVSKAALI*CTRPGK Trigger: CTTTCCTGGCCTGGTACATCAAATCAAGGCAGCCTT...GGACACAGGAGAAAGCCCAATGTGATAATAGAGGTCTCTGGTATGATCTGTTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000078834.12 ENSMUST00000114831.9 ENSMUST00000114833.10 ENSMUST00000114834.10 ENSMUST00000128156.9 ENSMUST00000135341.8 ENSMUST00000138349.8 |
||
| CDS-3UTR TCA 90 bp | AGGCTCAGTAAAACAGATCATACCAGAGACCTCTATTATCACATTGGGCTTTCTCTGAGAAGGCTGCCTTaGTTTGATGTACCAGGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: RLSKTDHTRDLYYHIGLSLRRLP*FDVPGQ Trigger: CTGGCCTGGTACATCAAATCAAGGCAGCCTTCTCAG...AGAAAGCCCAATGTGATAATAGAGGTCTCTGGTATGATCTGTTTTACTGAGCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000078834.12 ENSMUST00000114831.9 ENSMUST00000114833.10 ENSMUST00000114834.10 ENSMUST00000128156.9 ENSMUST00000135341.8 ENSMUST00000138349.8 |
||
| CDS-3UTR GCA 90 bp | GTAAAACAGATCATACCAGAGACCTCTATTATCACATTGGGCTTTCTCCTGTGTCAAGGTCATTGTTGCTaGAAGAGATGGGGCTCGGGA | + |
|
Preference number: 4 (lower is better) Translates to: VKQIIPETSIITLGFLLCQGHCC*KRWGSG Trigger: TCCCGAGCCCCATCTCTTGCAGCAACAATGACCTTG...ACACAGGAGAAAGCCCAATGTGATAATAGAGGTCTCTGGTATGATCTGTTTTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000078834.12 ENSMUST00000114831.9 ENSMUST00000123600.5 ENSMUST00000128156.9 ENSMUST00000135341.8 ENSMUST00000138349.8 ENSMUST00000148748.8 |
||
| CDS-3UTR CCA 90 bp | AAAACAGATCATACCAGAGACCTCTATTATCACATTGGGCTTTCTCCTGTGTCCCACACTCAATCAGGGTaGATGTTCCAGCTTTCCGCT | + |
|
Preference number: 4 (lower is better) Translates to: KTDHTRDLYYHIGLSPVSHTQSG*MFQLSA Trigger: AGCGGAAAGCTGGAACATCCACCCTGATTGAGTGTG...GGACACAGGAGAAAGCCCAATGTGATAATAGAGGTCTCTGGTATGATCTGTTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078834.12 ENSMUST00000114831.9 ENSMUST00000114833.10 ENSMUST00000114834.10 |
||
| CDS-3UTR CCA 90 bp | AGTAAAACAGATCATACCAGAGACCTCTATTATCACATTGGGCTTTCTCCTGTGCCTGCAGAAGTTGTTTaGGATGGTGTCAGCCTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: SKTDHTRDLYYHIGLSPVPAEVV*DGVSLE Trigger: CTCCAGGCTGACACCATCCCAAACAACTTCTGCAGG...CACAGGAGAAAGCCCAATGTGATAATAGAGGTCTCTGGTATGATCTGTTTTACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000078834.12 ENSMUST00000123600.5 ENSMUST00000128156.9 ENSMUST00000135341.8 ENSMUST00000138349.8 ENSMUST00000148748.8 |
||
| CDS-3UTR CCA 90 bp | GTAAAACAGATCATACCAGAGACCTCTATTATCACATTGGGCTTTCTCCTGTGTCCTGCAGAAGTTGTTTaGGATGGTGTCAGCCTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: VKQIIPETSIITLGFLLCPAEVV*DGVSLE Trigger: CTCCAGGCTGACACCATCCCAAACAACTTCTGCAGG...ACACAGGAGAAAGCCCAATGTGATAATAGAGGTCTCTGGTATGATCTGTTTTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000078834.12 ENSMUST00000123600.5 ENSMUST00000128156.9 ENSMUST00000135341.8 ENSMUST00000138349.8 ENSMUST00000148748.8 |
||
| CDS-3UTR CCA 90 bp | GGTGCAAAGCAGCAAAGGGCCAAGTCTTCAGGAGCTCAAATGTTGCTGTCTTCTGTCATTTTGGAACTGTaGGGAGAAATCTCTGTTATC | + |
|
Preference number: 4 (lower is better) Translates to: GAKQQRAKSSGAQMLLSSVILEL*GEISVI Trigger: GATAACAGAGATTTCTCCCCACAGTTCCAAAATGAC...AGAAGACAGCAACATTTGAGCTCCTGAAGACTTGGCCCTTTGCTGCTTTGCACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000078834.12 ENSMUST00000128156.9 ENSMUST00000135341.8 ENSMUST00000138349.8 ENSMUST00000148748.8 |
||
| CDS-3UTR CCA 90 bp | GATCATACCAGAGACCTCTATTATCACATTGGGCTTTCTCCTGTGTCCAGGCGCGTCATTTTGGAACTGTaGGGAGAAATCTCTTTTGCA | + |
|
Preference number: 4 (lower is better) Translates to: DHTRDLYYHIGLSPVSRRVILEL*GEISFA Trigger: TGCAAAAGAGATTTCTCCCCACAGTTCCAAAATGAC...GCGCCTGGACACAGGAGAAAGCCCAATGTGATAATAGAGGTCTCTGGTATGATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114834.10 |
||
| CDS-3UTR TCA 90 bp | AGTAAAACAGATCATACCAGAGACCTCTATTATCACATTGGGCTTTCTCCTGTGAAGGCTGCCTTGATTTaGTGTACCAGGCCAGGAAAG | + |
|
Preference number: 4 (lower is better) Translates to: SKTDHTRDLYYHIGLSPVKAALI*CTRPGK Trigger: CTTTCCTGGCCTGGTACATCAAATCAAGGCAGCCTT...CACAGGAGAAAGCCCAATGTGATAATAGAGGTCTCTGGTATGATCTGTTTTACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000078834.12 ENSMUST00000114831.9 ENSMUST00000114833.10 ENSMUST00000114834.10 ENSMUST00000128156.9 ENSMUST00000135341.8 ENSMUST00000138349.8 |
||
| CDS-3UTR CCA 90 bp | AGGCTCAGTAAAACAGATCATACCAGAGACCTCTATTATCACATTGGGCTTTCTCACACTCAATCAGGGTaGATGTTCCAGCTTTCCGCT | + |
|
Preference number: 4 (lower is better) Translates to: RLSKTDHTRDLYYHIGLSHTQSG*MFQLSA Trigger: AGCGGAAAGCTGGAACATCCACCCTGATTGAGTGTG...AGAAAGCCCAATGTGATAATAGAGGTCTCTGGTATGATCTGTTTTACTGAGCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078834.12 ENSMUST00000114831.9 ENSMUST00000114833.10 ENSMUST00000114834.10 |
||
| CDS-3UTR CCA 90 bp | AAACAGATCATACCAGAGACCTCTATTATCACATTGGGCTTTCTCCTGTGTCCATTGGTACTGTTTCCATaGTTTCCACCTCAACACGGC | + |
|
Preference number: 4 (lower is better) Translates to: KQIIPETSIITLGFLLCPLVLFP*FPPQHG Trigger: GCCGTGTTGAGGTGGAAACCATGGAAACAGTACCAA...TGGACACAGGAGAAAGCCCAATGTGATAATAGAGGTCTCTGGTATGATCTGTTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000078834.12 ENSMUST00000114831.9 ENSMUST00000114833.10 ENSMUST00000114834.10 ENSMUST00000128156.9 ENSMUST00000135341.8 ENSMUST00000138349.8 |
||
| CDS-3UTR CCA 90 bp | AAAACAGATCATACCAGAGACCTCTATTATCACATTGGGCTTTCTCCTGTGTCCTTGGTACTGTTTCCATaGTTTCCACCTCAACACGGC | + |
|
Preference number: 4 (lower is better) Translates to: KTDHTRDLYYHIGLSPVSLVLFP*FPPQHG Trigger: GCCGTGTTGAGGTGGAAACCATGGAAACAGTACCAA...GGACACAGGAGAAAGCCCAATGTGATAATAGAGGTCTCTGGTATGATCTGTTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000078834.12 ENSMUST00000114831.9 ENSMUST00000114833.10 ENSMUST00000114834.10 ENSMUST00000128156.9 ENSMUST00000135341.8 ENSMUST00000138349.8 |
||
| CDS-3UTR CCA 90 bp | GGCCAAGTCTTCAGGAGCTCAAATGTTGCTGTCTTCTTTACAGACATCTCCTGTTGGCTTTCGTCATTTTaGAACTGTGGGGAGAAATCT | + |
|
Preference number: 4 (lower is better) Translates to: GQVFRSSNVAVFFTDISCWLSSF*NCGEKS Trigger: AGATTTCTCCCCACAGTTCCAAAATGACGAAAGCCA...ACAGGAGATGTCTGTAAAGAAGACAGCAACATTTGAGCTCCTGAAGACTTGGCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000148748.8 |
||
| CDS-3UTR CCA 90 bp | AAACAGATCATACCAGAGACCTCTATTATCACATTGGGCTTTCTCCTGTGTCCATTGCGGTATCTGATTTaGGAGAGAAAGCTTCTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: KQIIPETSIITLGFLLCPLRYLI*ERKLLA Trigger: AGCCAGAAGCTTTCTCTCCCAAATCAGATACCGCAA...TGGACACAGGAGAAAGCCCAATGTGATAATAGAGGTCTCTGGTATGATCTGTTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078834.12 ENSMUST00000123600.5 |
||
| CDS-3UTR CCA 90 bp | AGGCTCAGTAAAACAGATCATACCAGAGACCTCTATTATCACATTGGGCTTTCTTTGGTACTGTTTCCATaGTTTCCACCTCAACACGGC | + |
|
Preference number: 4 (lower is better) Translates to: RLSKTDHTRDLYYHIGLSLVLFP*FPPQHG Trigger: GCCGTGTTGAGGTGGAAACCATGGAAACAGTACCAA...AGAAAGCCCAATGTGATAATAGAGGTCTCTGGTATGATCTGTTTTACTGAGCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000078834.12 ENSMUST00000114831.9 ENSMUST00000114833.10 ENSMUST00000114834.10 ENSMUST00000128156.9 ENSMUST00000135341.8 ENSMUST00000138349.8 |
||
| CDS-3UTR CCA 90 bp | AAACAGATCATACCAGAGACCTCTATTATCACATTGGGCTTTCTCCTGTGTCCACCACTTTCGTCATTTTaGAACTGTGGGGAGAAATCT | + |
|
Preference number: 4 (lower is better) Translates to: KQIIPETSIITLGFLLCPPLSSF*NCGEKS Trigger: AGATTTCTCCCCACAGTTCCAAAATGACGAAAGTGG...TGGACACAGGAGAAAGCCCAATGTGATAATAGAGGTCTCTGGTATGATCTGTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000078834.12 ENSMUST00000114831.9 ENSMUST00000114833.10 ENSMUST00000114834.10 ENSMUST00000128156.9 ENSMUST00000135341.8 ENSMUST00000138349.8 |
||
| CDS-3UTR CCA 90 bp | AAAACAGATCATACCAGAGACCTCTATTATCACATTGGGCTTTCTCCTGTGTCCGTCATTTTGGAACTGTaGGGAGAAATCTTGATGCAC | + |
|
Preference number: 4 (lower is better) Translates to: KTDHTRDLYYHIGLSPVSVILEL*GEILMH Trigger: GTGCATCAAGATTTCTCCCCACAGTTCCAAAATGAC...GGACACAGGAGAAAGCCCAATGTGATAATAGAGGTCTCTGGTATGATCTGTTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114833.10 |
||
| 3UTR CAA 72 bp | TTTGGTTTTGTCATGAATCCTATACGAAAGGGTTCATaGGCTCAGTATCTCTTCTTCTGTTCTCTGCTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: FGFVMNPIRKGS*AQYLFFCSLLS Trigger: GGAGAGCAGAGAACAGAAGAAGAGATACTGAGCCAATGAACCCTTTCGTATAGGATTCATGACAAAACCAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000078834.12 ENSMUST00000114833.10 ENSMUST00000128156.9 ENSMUST00000135341.8 ENSMUST00000138349.8 ENSMUST00000148748.8 |
||
| 3UTR CAA 72 bp | TTGTTTAGTTCACGTTGCTTCTACTCACTAGGAAATTaGGTTAAAAATCCCACCAAAAGCAGGGCAGTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: LFSSRCFYSLGN*VKNPTKSRAVV Trigger: CACCACTGCCCTGCTTTTGGTGGGATTTTTAACCAAATTTCCTAGTGAGTAGAAGCAACGTGAACTAAACAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000114833.10 ENSMUST00000138349.8 |
||
| CDS-3UTR CCA 90 bp | AAACAGATCATACCAGAGACCTCTATTATCACATTGGGCTTTCTCCTGTGTCCAGTCATTTTGGAACTGTaGGGAGAAATCTCTGTTATC | + |
|
Preference number: 4 (lower is better) Translates to: KQIIPETSIITLGFLLCPVILEL*GEISVI Trigger: GATAACAGAGATTTCTCCCCACAGTTCCAAAATGAC...TGGACACAGGAGAAAGCCCAATGTGATAATAGAGGTCTCTGGTATGATCTGTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000078834.12 ENSMUST00000114831.9 ENSMUST00000123600.5 ENSMUST00000128156.9 ENSMUST00000135341.8 ENSMUST00000138349.8 ENSMUST00000148748.8 |
||
| CDS-3UTR CCA 90 bp | AAAACAGATCATACCAGAGACCTCTATTATCACATTGGGCTTTCTCCTGTGTCCGTCATTTTGGAACTGTaGGGAGAAATCTCTGTTATC | + |
|
Preference number: 4 (lower is better) Translates to: KTDHTRDLYYHIGLSPVSVILEL*GEISVI Trigger: GATAACAGAGATTTCTCCCCACAGTTCCAAAATGAC...GGACACAGGAGAAAGCCCAATGTGATAATAGAGGTCTCTGGTATGATCTGTTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000078834.12 ENSMUST00000114831.9 ENSMUST00000123600.5 ENSMUST00000128156.9 ENSMUST00000135341.8 ENSMUST00000138349.8 ENSMUST00000148748.8 |
||
| CDS-3UTR CCA 90 bp | GGGAGCCTTGTCAATCTCTGTAAACTGCAAGTCAGAGTAGGGAATAGAAAAAGAGTCATTTTGGAACTGTaGGGAGAAATCTCTGTTATC | + |
|
Preference number: 4 (lower is better) Translates to: GSLVNLCKLQVRVGNRKRVILEL*GEISVI Trigger: GATAACAGAGATTTCTCCCCACAGTTCCAAAATGAC...TCTTTTTCTATTCCCTACTCTGACTTGCAGTTTACAGAGATTGACAAGGCTCCC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000078834.12 ENSMUST00000128156.9 ENSMUST00000135341.8 ENSMUST00000138349.8 ENSMUST00000148748.8 |
||
| CDS-3UTR CCA 90 bp | AGGCTCAGTAAAACAGATCATACCAGAGACCTCTATTATCACATTGGGCTTTCTCCACTTTCGTCATTTTaGAACTGTGGGGAGAAATCT | + |
|
Preference number: 4 (lower is better) Translates to: RLSKTDHTRDLYYHIGLSPLSSF*NCGEKS Trigger: AGATTTCTCCCCACAGTTCCAAAATGACGAAAGTGG...AGAAAGCCCAATGTGATAATAGAGGTCTCTGGTATGATCTGTTTTACTGAGCCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 7 transcripts: ENSMUST00000078834.12 ENSMUST00000114831.9 ENSMUST00000114833.10 ENSMUST00000114834.10 ENSMUST00000128156.9 ENSMUST00000135341.8 ENSMUST00000138349.8 |
||
| CDS-3UTR CCA 90 bp | AGTAAAACAGATCATACCAGAGACCTCTATTATCACATTGGGCTTTCTCCTGTGCCACTTTCGTCATTTTaGAACTGTGGGGAGAAATCT | + |
|
Preference number: 4 (lower is better) Translates to: SKTDHTRDLYYHIGLSPVPLSSF*NCGEKS Trigger: AGATTTCTCCCCACAGTTCCAAAATGACGAAAGTGG...CACAGGAGAAAGCCCAATGTGATAATAGAGGTCTCTGGTATGATCTGTTTTACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 7 transcripts: ENSMUST00000078834.12 ENSMUST00000114831.9 ENSMUST00000114833.10 ENSMUST00000114834.10 ENSMUST00000128156.9 ENSMUST00000135341.8 ENSMUST00000138349.8 |
||
| CDS-3UTR CCA 90 bp | CTCAGTAAAACAGATCATACCAGAGACCTCTATTATCACATTGGGCTTTCTCCTCCACTTTCGTCATTTTaGAACTGTGGGGAGAAATCT | + |
|
Preference number: 4 (lower is better) Translates to: LSKTDHTRDLYYHIGLSPPLSSF*NCGEKS Trigger: AGATTTCTCCCCACAGTTCCAAAATGACGAAAGTGG...AGGAGAAAGCCCAATGTGATAATAGAGGTCTCTGGTATGATCTGTTTTACTGAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 7 transcripts: ENSMUST00000078834.12 ENSMUST00000114831.9 ENSMUST00000114833.10 ENSMUST00000114834.10 ENSMUST00000128156.9 ENSMUST00000135341.8 ENSMUST00000138349.8 |
||
| CDS-3UTR CCA 90 bp | TCAGTAAAACAGATCATACCAGAGACCTCTATTATCACATTGGGCTTTCTCCTGCCACTTTCGTCATTTTaGAACTGTGGGGAGAAATCT | + |
|
Preference number: 4 (lower is better) Translates to: SVKQIIPETSIITLGFLLPLSSF*NCGEKS Trigger: AGATTTCTCCCCACAGTTCCAAAATGACGAAAGTGG...CAGGAGAAAGCCCAATGTGATAATAGAGGTCTCTGGTATGATCTGTTTTACTGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 7 transcripts: ENSMUST00000078834.12 ENSMUST00000114831.9 ENSMUST00000114833.10 ENSMUST00000114834.10 ENSMUST00000128156.9 ENSMUST00000135341.8 ENSMUST00000138349.8 |
||
| CDS TCA 90 bp | TGGTTTCCACCTCAACACGGCACGGCTGAGAAGGCTGCCTTGATTTaGTGTACCAGGCCAGGAAAGCCATCACAACCCCTGCACCAACCA | + |
|
Preference number: 5 (lower is better) Translates to: WFPPQHGTAEKAALI*CTRPGKPSQPLHQP Trigger: TGGTTGGTGCAGGGGTTGTGATGGCTTTCCTGGCCTGGTACATCAAATCAAGGCAGCCTTCTCAGCCGTGCCGTGTTGAGGTGGAAACCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000078834.12 ENSMUST00000114831.9 ENSMUST00000114832.3 ENSMUST00000114833.10 ENSMUST00000114834.10 ENSMUST00000128156.9 ENSMUST00000135341.8 ENSMUST00000138349.8 |
||
| CDS GCA 90 bp | AGATGGGGCTCGGGAGGACTTGTGACTGCCTGTCCCTGTAGTTCCTaGAGAAGTTGTTTGGGATGGTGTCAGCCTGGAGCCAGGCATAAT | + |
|
Preference number: 5 (lower is better) Translates to: RWGSGGLVTACPCSS*RSCLGWCQPGARHN Trigger: ATTATGCCTGGCTCCAGGCTGACACCATCCCAAACAACTTCTGCAGGAACTACAGGGACAGGCAGTCACAAGTCCTCCCGAGCCCCATCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000078834.12 ENSMUST00000123600.5 ENSMUST00000128156.9 ENSMUST00000135341.8 ENSMUST00000138349.8 ENSMUST00000148748.8 |
||
| CDS-3UTR CAA 90 bp | CTCCCAGGAGAGCTCAGGCTGCTTGTACTCTGGGAAGTTGGCCTCTGTGATGAAGCTCCAAGGTCATTGTaGCTGCAAGAGATGGGGCTC | + |
|
Preference number: 5 (lower is better) Translates to: LPGELRLLVLWEVGLCDEAPRSL*LQEMGL Trigger: GAGCCCCATCTCTTGCAGCAACAATGACCTTGGAGC...TTCATCACAGAGGCCAACTTCCCAGAGTACAAGCAGCCTGAGCTCTCCTGGGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000078834.12 ENSMUST00000128156.9 ENSMUST00000135341.8 ENSMUST00000138349.8 ENSMUST00000148748.8 |
||
| CDS-3UTR CAA 90 bp | AACCAGGAAGAAAGGTGGTGTCCTTCCGGACTCCGGGGATCCAGGCCTGAATATTCCTGCAGAAGTTGTTaGGGATGGTGTCAGCCTGGA | + |
|
Preference number: 5 (lower is better) Translates to: NQEERWCPSGLRGSRPEYSCRSC*GWCQPG Trigger: TCCAGGCTGACACCATCCCAAACAACTTCTGCAGGA...ATATTCAGGCCTGGATCCCCGGAGTCCGGAAGGACACCACCTTTCTTCCTGGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000078834.12 ENSMUST00000128156.9 ENSMUST00000135341.8 ENSMUST00000138349.8 ENSMUST00000148748.8 |
||
| CDS-3UTR CAA 90 bp | ATTGGGCTTTCTCCTGTGTCCAGGCGCAGCTGGACTAACTGCCCTTGTATCTTCGCTCCAAGGTCATTGTaGCTGCAAGAGATGGGGCTC | + |
|
Preference number: 5 (lower is better) Translates to: IGLSPVSRRSWTNCPCIFAPRSL*LQEMGL Trigger: GAGCCCCATCTCTTGCAGCAACAATGACCTTGGAGC...GAAGATACAAGGGCAGTTAGTCCAGCTGCGCCTGGACACAGGAGAAAGCCCAAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000078834.12 ENSMUST00000114831.9 ENSMUST00000123600.5 ENSMUST00000128156.9 ENSMUST00000135341.8 ENSMUST00000138349.8 ENSMUST00000148748.8 |
||
| CDS-3UTR CAA 90 bp | CTGCTCTCCTCCAATAGGTGCAAAGCAGCAAAGGGCCAAGTCTTCAGGAGCTCAGCTCCAAGGTCATTGTaGCTGCAAGAGATGGGGCTC | + |
|
Preference number: 5 (lower is better) Translates to: LLSSNRCKAAKGQVFRSSAPRSL*LQEMGL Trigger: GAGCCCCATCTCTTGCAGCAACAATGACCTTGGAGC...TGAGCTCCTGAAGACTTGGCCCTTTGCTGCTTTGCACCTATTGGAGGAGAGCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000078834.12 ENSMUST00000128156.9 ENSMUST00000135341.8 ENSMUST00000138349.8 ENSMUST00000148748.8 |
||
| CDS CCA 90 bp | CAGGGTACTCGCAGATCTTGGCTGGCTTTCGTCATTTTGGAACTGTaGGGAGAAATCTCTGTTATCCTGAGGGAGGTGGAGGCTGTAGGC | + |
|
Preference number: 5 (lower is better) Translates to: QGTRRSWLAFVILEL*GEISVILREVEAVG Trigger: GCCTACAGCCTCCACCTCCCTCAGGATAACAGAGATTTCTCCCCACAGTTCCAAAATGACGAAAGCCAGCCAAGATCTGCGAGTACCCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000123600.5 ENSMUST00000148748.8 |
||
| CDS-3UTR CAA 90 bp | CCAATAGGTGCAAAGCAGCAAAGGGCCAAGTCTTCAGGAGCTCAAATGTTGCTGAAGCTTCTGGCTCTTTaGCAGAGGGGGAGGGGCTCT | + |
|
Preference number: 5 (lower is better) Translates to: PIGAKQQRAKSSGAQMLLKLLAL*QRGRGS Trigger: AGAGCCCCTCCCCCTCTGCAAAAGAGCCAGAAGCTT...CAGCAACATTTGAGCTCCTGAAGACTTGGCCCTTTGCTGCTTTGCACCTATTGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000078834.12 |
||
| CDS-3UTR CAA 90 bp | TCAGGAGCTCAAATGTTGCTGTCTTCTTTACAGACATCTCCTGTGCCAGAGGAGGGGTCTCTGATGCACTaGAGGCTGGGAGTTGTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: SGAQMLLSSLQTSPVPEEGSLMH*RLGVVQ Trigger: CTGGACAACTCCCAGCCTCAAGTGCATCAGAGACCC...CTCCTCTGGCACAGGAGATGTCTGTAAAGAAGACAGCAACATTTGAGCTCCTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078834.12 |
||
| CDS-3UTR CAA 90 bp | TCCTGTGTCTTCATCCTCCTTGCTGCTGGCCCTCACAGTCATTGGTACTGTTTCTCCTGCAGAAGTTGTTaGGGATGGTGTCAGCCTGGA | + |
|
Preference number: 5 (lower is better) Translates to: SCVFILLAAGPHSHWYCFSCRSC*GWCQPG Trigger: TCCAGGCTGACACCATCCCAAACAACTTCTGCAGGA...GAAACAGTACCAATGACTGTGAGGGCCAGCAGCAAGGAGGATGAAGACACAGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000123600.5 ENSMUST00000148748.8 |
||
| CDS-3UTR CAA 90 bp | TCATACCAGAGACCTCTATTATCACATTGGGCTTTCTCCTGTGTCCAGGCGCAGGCTCCAAGGTCATTGTaGCTGCAAGAGATGGGGCTC | + |
|
Preference number: 5 (lower is better) Translates to: SYQRPLLSHWAFSCVQAQAPRSL*LQEMGL Trigger: GAGCCCCATCTCTTGCAGCAACAATGACCTTGGAGC...CTGCGCCTGGACACAGGAGAAAGCCCAATGTGATAATAGAGGTCTCTGGTATGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000078834.12 ENSMUST00000114831.9 ENSMUST00000123600.5 ENSMUST00000128156.9 ENSMUST00000135341.8 ENSMUST00000138349.8 ENSMUST00000148748.8 |
||
| CDS-3UTR CAA 90 bp | CCAATAGGTGCAAAGCAGCAAAGGGCCAAGTCTTCAGGAGCTCAAATGTTGCTGGCTCCAAGGTCATTGTaGCTGCAAGAGATGGGGCTC | + |
|
Preference number: 5 (lower is better) Translates to: PIGAKQQRAKSSGAQMLLAPRSL*LQEMGL Trigger: GAGCCCCATCTCTTGCAGCAACAATGACCTTGGAGC...CAGCAACATTTGAGCTCCTGAAGACTTGGCCCTTTGCTGCTTTGCACCTATTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000078834.12 ENSMUST00000128156.9 ENSMUST00000135341.8 ENSMUST00000138349.8 ENSMUST00000148748.8 |
||
| CDS-3UTR CAA 90 bp | AATGGAGACTCCCAGGAGAGCTCAGGCTGCTTGTACTCTGGGAAGTTGGCCTCTTGGCCCTCACAGTCATaGGTACTGTTTCCATGGTTT | + |
|
Preference number: 5 (lower is better) Translates to: NGDSQESSGCLYSGKLASWPSQS*VLFPWF Trigger: AAACCATGGAAACAGTACCAATGACTGTGAGGGCCA...AGAGGCCAACTTCCCAGAGTACAAGCAGCCTGAGCTCTCCTGGGAGTCTCCATT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000078834.12 ENSMUST00000114833.10 ENSMUST00000128156.9 ENSMUST00000135341.8 ENSMUST00000138349.8 |
||
| CDS CCA 90 bp | AAGAGGACCGATGTAGAGATGGCCACTTTCGTCATTTTGGAACTGTaGGGAGAAATCTCTGTTATCCTGAGGGAGGTGGAGGCTGTAGGC | + |
|
Preference number: 5 (lower is better) Translates to: KRTDVEMATFVILEL*GEISVILREVEAVG Trigger: GCCTACAGCCTCCACCTCCCTCAGGATAACAGAGATTTCTCCCCACAGTTCCAAAATGACGAAAGTGGCCATCTCTACATCGGTCCTCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000078834.12 ENSMUST00000114831.9 ENSMUST00000128156.9 ENSMUST00000135341.8 ENSMUST00000138349.8 |
||
| CDS-3UTR CAA 90 bp | GAGCTCAAATGTTGCTGTCTTCTTTACAGACATCTCCTGTGCCAGAGGAGCCTTGCTCCAAGGTCATTGTaGCTGCAAGAGATGGGGCTC | + |
|
Preference number: 5 (lower is better) Translates to: ELKCCCLLYRHLLCQRSLAPRSL*LQEMGL Trigger: GAGCCCCATCTCTTGCAGCAACAATGACCTTGGAGC...AAGGCTCCTCTGGCACAGGAGATGTCTGTAAAGAAGACAGCAACATTTGAGCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000078834.12 ENSMUST00000128156.9 ENSMUST00000135341.8 ENSMUST00000138349.8 ENSMUST00000148748.8 |
||
| CDS CCA 90 bp | AAGAGGACCGATGTAGAGATGGCCACTTTCGTCATTTTGGAACTGTaGGGAGAAATCTTGATGCACTTGAGGCTGGGAGTTGTCCAGTGG | + |
|
Preference number: 5 (lower is better) Translates to: KRTDVEMATFVILEL*GEILMHLRLGVVQW Trigger: CCACTGGACAACTCCCAGCCTCAAGTGCATCAAGATTTCTCCCCACAGTTCCAAAATGACGAAAGTGGCCATCTCTACATCGGTCCTCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114833.10 |
||
| CDS-3UTR CAA 90 bp | AACAGATCATACCAGAGACCTCTATTATCACATTGGGCTTTCTCCTGTGTCCAGGGGTCTCTGATGCACTaGAGGCTGGGAGTTGTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: NRSYQRPLLSHWAFSCVQGSLMH*RLGVVQ Trigger: CTGGACAACTCCCAGCCTCAAGTGCATCAGAGACCC...CTGGACACAGGAGAAAGCCCAATGTGATAATAGAGGTCTCTGGTATGATCTGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000078834.12 ENSMUST00000114831.9 ENSMUST00000114834.10 |
||
| CDS-3UTR CAA 90 bp | GTTGCTGTCTTCTTTACAGACATCTCCTGTGCCAGAGGAGCCTTGGAAGACAATTCCTGCAGAAGTTGTTaGGGATGGTGTCAGCCTGGA | + |
|
Preference number: 5 (lower is better) Translates to: VAVFFTDISCARGALEDNSCRSC*GWCQPG Trigger: TCCAGGCTGACACCATCCCAAACAACTTCTGCAGGA...ATTGTCTTCCAAGGCTCCTCTGGCACAGGAGATGTCTGTAAAGAAGACAGCAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000078834.12 ENSMUST00000128156.9 ENSMUST00000135341.8 ENSMUST00000138349.8 ENSMUST00000148748.8 |
||
| CDS-3UTR CAA 90 bp | TCTCCTCCAATAGGTGCAAAGCAGCAAAGGGCCAAGTCTTCAGGAGCTCAAATGGAAGGCTGCCTTGATTaGATGTACCAGGCCAGGAAA | + |
|
Preference number: 5 (lower is better) Translates to: SPPIGAKQQRAKSSGAQMEGCLD*MYQARK Trigger: TTTCCTGGCCTGGTACATCAAATCAAGGCAGCCTTC...CATTTGAGCTCCTGAAGACTTGGCCCTTTGCTGCTTTGCACCTATTGGAGGAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000078834.12 ENSMUST00000114833.10 ENSMUST00000128156.9 ENSMUST00000135341.8 ENSMUST00000138349.8 |
||
| CDS-3UTR CAA 90 bp | AACTCGAGGCTTTTAATGGAGACTCCCAGGAGAGCTCAGGCTGCTTGTACTCTGTGGCCCTCACAGTCATaGGTACTGTTTCCATGGTTT | + |
|
Preference number: 5 (lower is better) Translates to: NSRLLMETPRRAQAACTLWPSQS*VLFPWF Trigger: AAACCATGGAAACAGTACCAATGACTGTGAGGGCCA...CAGAGTACAAGCAGCCTGAGCTCTCCTGGGAGTCTCCATTAAAAGCCTCGAGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000078834.12 ENSMUST00000114833.10 ENSMUST00000128156.9 ENSMUST00000135341.8 ENSMUST00000138349.8 |
||
| CDS-3UTR CAA 90 bp | ATGTTGCTGTCTTCTTTACAGACATCTCCTGTGCCAGAGGAGCCTTGGAAGACACTGTGGGGAGAAATCTaGATGCACTTGAGGCTGGGA | + |
|
Preference number: 5 (lower is better) Translates to: MLLSSLQTSPVPEEPWKTLWGEI*MHLRLG Trigger: TCCCAGCCTCAAGTGCATCAAGATTTCTCCCCACAG...TGTCTTCCAAGGCTCCTCTGGCACAGGAGATGTCTGTAAAGAAGACAGCAACAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114833.10 |
||
| CDS-3UTR CAA 90 bp | CTCCCAGGAGAGCTCAGGCTGCTTGTACTCTGGGAAGTTGGCCTCTGTGATGAAGCAACATTTGTGTTCTaGTTGATCACACACTCAATC | + |
|
Preference number: 5 (lower is better) Translates to: LPGELRLLVLWEVGLCDEATFVF*LITHSI Trigger: GATTGAGTGTGTGATCAACAAGAACACAAATGTTGC...TTCATCACAGAGGCCAACTTCCCAGAGTACAAGCAGCCTGAGCTCTCCTGGGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078834.12 ENSMUST00000114833.10 |
||
| CDS-3UTR CAA 90 bp | CTCTCCTCCAATAGGTGCAAAGCAGCAAAGGGCCAAGTCTTCAGGAGCTCAAATGCCACTTTCGTCATTTaGGAACTGTGGGGAGAAATC | + |
|
Preference number: 5 (lower is better) Translates to: LSSNRCKAAKGQVFRSSNATFVI*ELWGEI Trigger: GATTTCTCCCCACAGTTCCAAAATGACGAAAGTGGC...ATTTGAGCTCCTGAAGACTTGGCCCTTTGCTGCTTTGCACCTATTGGAGGAGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000078834.12 ENSMUST00000114833.10 ENSMUST00000128156.9 ENSMUST00000135341.8 ENSMUST00000138349.8 |
||
| CDS-3UTR CAA 90 bp | TGTTGCTGTCTTCTTTACAGACATCTCCTGTGCCAGAGGAGCCTTGGAAGACAAGAAGGCTGCCTTGATTaGATGTACCAGGCCAGGAAA | + |
|
Preference number: 5 (lower is better) Translates to: CCCLLYRHLLCQRSLGRQEGCLD*MYQARK Trigger: TTTCCTGGCCTGGTACATCAAATCAAGGCAGCCTTC...TTGTCTTCCAAGGCTCCTCTGGCACAGGAGATGTCTGTAAAGAAGACAGCAACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000078834.12 ENSMUST00000114833.10 ENSMUST00000128156.9 ENSMUST00000135341.8 ENSMUST00000138349.8 |
||
| CDS-3UTR CAA 90 bp | GATCATACCAGAGACCTCTATTATCACATTGGGCTTTCTCCTGTGTCCAGGCGCTGGCCCTCACAGTCATaGGTACTGTTTCCATGGTTT | + |
|
Preference number: 5 (lower is better) Translates to: DHTRDLYYHIGLSPVSRRWPSQS*VLFPWF Trigger: AAACCATGGAAACAGTACCAATGACTGTGAGGGCCA...GCGCCTGGACACAGGAGAAAGCCCAATGTGATAATAGAGGTCTCTGGTATGATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000078834.12 ENSMUST00000114831.9 ENSMUST00000114833.10 ENSMUST00000114834.10 ENSMUST00000128156.9 ENSMUST00000135341.8 ENSMUST00000138349.8 |
||
| CDS-3UTR CAA 90 bp | CCTCCAATAGGTGCAAAGCAGCAAAGGGCCAAGTCTTCAGGAGCTCAAATGTTGTGGCCCTCACAGTCATaGGTACTGTTTCCATGGTTT | + |
|
Preference number: 5 (lower is better) Translates to: PPIGAKQQRAKSSGAQMLWPSQS*VLFPWF Trigger: AAACCATGGAAACAGTACCAATGACTGTGAGGGCCA...CAACATTTGAGCTCCTGAAGACTTGGCCCTTTGCTGCTTTGCACCTATTGGAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000078834.12 ENSMUST00000114833.10 ENSMUST00000128156.9 ENSMUST00000135341.8 ENSMUST00000138349.8 |
||
| CDS-3UTR CAA 90 bp | TTGGGCTTTCTCCTGTGTCCAGGCGCAGCTGGACTAACTGCCCTTGTATCTTCTACATTTGTGTTCTTGTaGATCACACACTCAATCAGG | + |
|
Preference number: 5 (lower is better) Translates to: LGFLLCPGAAGLTALVSSTFVFL*ITHSIR Trigger: CCTGATTGAGTGTGTGATCAACAAGAACACAAATGT...AGAAGATACAAGGGCAGTTAGTCCAGCTGCGCCTGGACACAGGAGAAAGCCCAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078834.12 ENSMUST00000114831.9 ENSMUST00000114833.10 ENSMUST00000114834.10 |
||
| CDS-3UTR CAA 90 bp | AGGCTCAGTAAAACAGATCATACCAGAGACCTCTATTATCACATTGGGCTTTCTGGGTCTCTGATGCACTaGAGGCTGGGAGTTGTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: RLSKTDHTRDLYYHIGLSGSLMH*RLGVVQ Trigger: CTGGACAACTCCCAGCCTCAAGTGCATCAGAGACCC...AGAAAGCCCAATGTGATAATAGAGGTCTCTGGTATGATCTGTTTTACTGAGCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000078834.12 ENSMUST00000114831.9 ENSMUST00000114834.10 |
||
| CDS-3UTR CAA 90 bp | AGTAAAACAGATCATACCAGAGACCTCTATTATCACATTGGGCTTTCTCCTGTGAAGCTTCTGGCTCTTTaGCAGAGGGGGAGGGGCTCT | + |
|
Preference number: 5 (lower is better) Translates to: SKTDHTRDLYYHIGLSPVKLLAL*QRGRGS Trigger: AGAGCCCCTCCCCCTCTGCAAAAGAGCCAGAAGCTT...CACAGGAGAAAGCCCAATGTGATAATAGAGGTCTCTGGTATGATCTGTTTTACT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000078834.12 ENSMUST00000123600.5 |
||
| CDS-3UTR CAA 90 bp | AATGCTAGCTGGGCTCAGACTTGCCATTGTTTAGTTCACGTTGCTTCTACTCACGAAGGCTGCCTTGATTaGATGTACCAGGCCAGGAAA | + |
|
Preference number: 5 (lower is better) Translates to: NASWAQTCHCLVHVASTHEGCLD*MYQARK Trigger: TTTCCTGGCCTGGTACATCAAATCAAGGCAGCCTTC...GTGAGTAGAAGCAACGTGAACTAAACAATGGCAAGTCTGAGCCCAGCTAGCATT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114833.10 ENSMUST00000138349.8 |
||
| CDS-3UTR CAA 90 bp | AATGCTAGCTGGGCTCAGACTTGCCATTGTTTAGTTCACGTTGCTTCTACTCACGAAATCTTGATGCACTaGAGGCTGGGAGTTGTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: NASWAQTCHCLVHVASTHEILMH*RLGVVQ Trigger: CTGGACAACTCCCAGCCTCAAGTGCATCAAGATTTC...GTGAGTAGAAGCAACGTGAACTAAACAATGGCAAGTCTGAGCCCAGCTAGCATT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114833.10 |
||
| CDS-3UTR CAA 90 bp | AACTCGAGGCTTTTAATGGAGACTCCCAGGAGAGCTCAGGCTGCTTGTACTCTGACATTTGTGTTCTTGTaGATCACACACTCAATCAGG | + |
|
Preference number: 5 (lower is better) Translates to: NSRLLMETPRRAQAACTLTFVFL*ITHSIR Trigger: CCTGATTGAGTGTGTGATCAACAAGAACACAAATGT...CAGAGTACAAGCAGCCTGAGCTCTCCTGGGAGTCTCCATTAAAAGCCTCGAGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000078834.12 ENSMUST00000114833.10 |
||
| CDS-3UTR CAA 90 bp | AAACAGATCATACCAGAGACCTCTATTATCACATTGGGCTTTCTCCTGTGTCCATCCTGCAGAAGTTGTTaGGGATGGTGTCAGCCTGGA | + |
|
Preference number: 5 (lower is better) Translates to: KQIIPETSIITLGFLLCPSCRSC*GWCQPG Trigger: TCCAGGCTGACACCATCCCAAACAACTTCTGCAGGA...TGGACACAGGAGAAAGCCCAATGTGATAATAGAGGTCTCTGGTATGATCTGTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000078834.12 ENSMUST00000123600.5 ENSMUST00000128156.9 ENSMUST00000135341.8 ENSMUST00000138349.8 ENSMUST00000148748.8 |
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| CDS-3UTR CAA 90 bp | TCAGTAAAACAGATCATACCAGAGACCTCTATTATCACATTGGGCTTTCTCCTGGCTCCAAGGTCATTGTaGCTGCAAGAGATGGGGCTC | + |
|
Preference number: 5 (lower is better) Translates to: SVKQIIPETSIITLGFLLAPRSL*LQEMGL Trigger: GAGCCCCATCTCTTGCAGCAACAATGACCTTGGAGC...CAGGAGAAAGCCCAATGTGATAATAGAGGTCTCTGGTATGATCTGTTTTACTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000078834.12 ENSMUST00000114831.9 ENSMUST00000123600.5 ENSMUST00000128156.9 ENSMUST00000135341.8 ENSMUST00000138349.8 ENSMUST00000148748.8 |
||
| CDS-3UTR CAA 90 bp | TGCTTTGAGTTAATCTCTGAGTGGAACTCGAGGCTTTTAATGGAGACTCCCAGGGCCACTTTCGTCATTTaGGAACTGTGGGGAGAAATC | + |
|
Preference number: 5 (lower is better) Translates to: CFELISEWNSRLLMETPRATFVI*ELWGEI Trigger: GATTTCTCCCCACAGTTCCAAAATGACGAAAGTGGC...CCTGGGAGTCTCCATTAAAAGCCTCGAGTTCCACTCAGAGATTAACTCAAAGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000078834.12 ENSMUST00000114833.10 ENSMUST00000128156.9 ENSMUST00000135341.8 ENSMUST00000138349.8 |
||
| CDS-3UTR CAA 90 bp | AAAGCAGCAAAGGGCCAAGTCTTCAGGAGCTCAAATGTTGCTGTCTTCTTTACAGAAGGCTGCCTTGATTaGATGTACCAGGCCAGGAAA | + |
|
Preference number: 5 (lower is better) Translates to: KAAKGQVFRSSNVAVFFTEGCLD*MYQARK Trigger: TTTCCTGGCCTGGTACATCAAATCAAGGCAGCCTTC...TGTAAAGAAGACAGCAACATTTGAGCTCCTGAAGACTTGGCCCTTTGCTGCTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000078834.12 ENSMUST00000114833.10 ENSMUST00000128156.9 ENSMUST00000135341.8 ENSMUST00000138349.8 |
||
| CDS-3UTR CAA 90 bp | TCTCCTCCAATAGGTGCAAAGCAGCAAAGGGCCAAGTCTTCAGGAGCTCAAATGACATTTGTGTTCTTGTaGATCACACACTCAATCAGG | + |
|
Preference number: 5 (lower is better) Translates to: SPPIGAKQQRAKSSGAQMTFVFL*ITHSIR Trigger: CCTGATTGAGTGTGTGATCAACAAGAACACAAATGT...CATTTGAGCTCCTGAAGACTTGGCCCTTTGCTGCTTTGCACCTATTGGAGGAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078834.12 ENSMUST00000114833.10 |
||
| CDS-3UTR CAA 90 bp | AACAGATCATACCAGAGACCTCTATTATCACATTGGGCTTTCTCCTGTGTCCAGCTGGCTTTCGTCATTTaGGAACTGTGGGGAGAAATC | + |
|
Preference number: 5 (lower is better) Translates to: NRSYQRPLLSHWAFSCVQLAFVI*ELWGEI Trigger: GATTTCTCCCCACAGTTCCAAAATGACGAAAGCCAG...CTGGACACAGGAGAAAGCCCAATGTGATAATAGAGGTCTCTGGTATGATCTGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000123600.5 ENSMUST00000148748.8 |
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| CDS-3UTR CAA 90 bp | AAAGCAGCAAAGGGCCAAGTCTTCAGGAGCTCAAATGTTGCTGTCTTCTTTACACTGGCTTTCGTCATTTaGGAACTGTGGGGAGAAATC | + |
|
Preference number: 5 (lower is better) Translates to: KAAKGQVFRSSNVAVFFTLAFVI*ELWGEI Trigger: GATTTCTCCCCACAGTTCCAAAATGACGAAAGCCAG...TGTAAAGAAGACAGCAACATTTGAGCTCCTGAAGACTTGGCCCTTTGCTGCTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148748.8 |
||
| CDS-3UTR CAA 90 bp | AAAACAGATCATACCAGAGACCTCTATTATCACATTGGGCTTTCTCCTGTGTCCGCCACTTTCGTCATTTaGGAACTGTGGGGAGAAATC | + |
|
Preference number: 5 (lower is better) Translates to: KTDHTRDLYYHIGLSPVSATFVI*ELWGEI Trigger: GATTTCTCCCCACAGTTCCAAAATGACGAAAGTGGC...GGACACAGGAGAAAGCCCAATGTGATAATAGAGGTCTCTGGTATGATCTGTTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000078834.12 ENSMUST00000114831.9 ENSMUST00000114833.10 ENSMUST00000114834.10 ENSMUST00000128156.9 ENSMUST00000135341.8 ENSMUST00000138349.8 |
||
| CDS-3UTR CAA 90 bp | GAATCCTATACGAAAGGGTTCATTGGCTCAGTATCTCTTCTTCTGTTCTCTGCTGCCACTTTCGTCATTTaGGAACTGTGGGGAGAAATC | + |
|
Preference number: 5 (lower is better) Translates to: ESYTKGFIGSVSLLLFSAATFVI*ELWGEI Trigger: GATTTCTCCCCACAGTTCCAAAATGACGAAAGTGGC...AGCAGAGAACAGAAGAAGAGATACTGAGCCAATGAACCCTTTCGTATAGGATTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000078834.12 ENSMUST00000114833.10 ENSMUST00000128156.9 ENSMUST00000135341.8 ENSMUST00000138349.8 |
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| CDS-3UTR CAA 90 bp | GTAAAACAGATCATACCAGAGACCTCTATTATCACATTGGGCTTTCTCCTGTGTGAAGGCTGCCTTGATTaGATGTACCAGGCCAGGAAA | + |
|
Preference number: 5 (lower is better) Translates to: VKQIIPETSIITLGFLLCEGCLD*MYQARK Trigger: TTTCCTGGCCTGGTACATCAAATCAAGGCAGCCTTC...ACACAGGAGAAAGCCCAATGTGATAATAGAGGTCTCTGGTATGATCTGTTTTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000078834.12 ENSMUST00000114831.9 ENSMUST00000114833.10 ENSMUST00000114834.10 ENSMUST00000128156.9 ENSMUST00000135341.8 ENSMUST00000138349.8 |
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| CDS-3UTR CAA 90 bp | TCAGTAAAACAGATCATACCAGAGACCTCTATTATCACATTGGGCTTTCTCCTGGAAGGCTGCCTTGATTaGATGTACCAGGCCAGGAAA | + |
|
Preference number: 5 (lower is better) Translates to: SVKQIIPETSIITLGFLLEGCLD*MYQARK Trigger: TTTCCTGGCCTGGTACATCAAATCAAGGCAGCCTTC...CAGGAGAAAGCCCAATGTGATAATAGAGGTCTCTGGTATGATCTGTTTTACTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000078834.12 ENSMUST00000114831.9 ENSMUST00000114833.10 ENSMUST00000114834.10 ENSMUST00000128156.9 ENSMUST00000135341.8 ENSMUST00000138349.8 |
||
| CDS-3UTR CAA 90 bp | AGTAAAACAGATCATACCAGAGACCTCTATTATCACATTGGGCTTTCTCCTGTGGCCACTTTCGTCATTTaGGAACTGTGGGGAGAAATC | + |
|
Preference number: 5 (lower is better) Translates to: SKTDHTRDLYYHIGLSPVATFVI*ELWGEI Trigger: GATTTCTCCCCACAGTTCCAAAATGACGAAAGTGGC...CACAGGAGAAAGCCCAATGTGATAATAGAGGTCTCTGGTATGATCTGTTTTACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000078834.12 ENSMUST00000114831.9 ENSMUST00000114833.10 ENSMUST00000114834.10 ENSMUST00000128156.9 ENSMUST00000135341.8 ENSMUST00000138349.8 |
||
| CDS-3UTR CAA 90 bp | TCAGTAAAACAGATCATACCAGAGACCTCTATTATCACATTGGGCTTTCTCCTGGCCACTTTCGTCATTTaGGAACTGTGGGGAGAAATC | + |
|
Preference number: 5 (lower is better) Translates to: SVKQIIPETSIITLGFLLATFVI*ELWGEI Trigger: GATTTCTCCCCACAGTTCCAAAATGACGAAAGTGGC...CAGGAGAAAGCCCAATGTGATAATAGAGGTCTCTGGTATGATCTGTTTTACTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000078834.12 ENSMUST00000114831.9 ENSMUST00000114833.10 ENSMUST00000114834.10 ENSMUST00000128156.9 ENSMUST00000135341.8 ENSMUST00000138349.8 |
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| CDS-3UTR CAA 90 bp | AGTAAAACAGATCATACCAGAGACCTCTATTATCACATTGGGCTTTCTCCTGTGTGGCCCTCACAGTCATaGGTACTGTTTCCATGGTTT | + |
|
Preference number: 5 (lower is better) Translates to: SKTDHTRDLYYHIGLSPVWPSQS*VLFPWF Trigger: AAACCATGGAAACAGTACCAATGACTGTGAGGGCCA...CACAGGAGAAAGCCCAATGTGATAATAGAGGTCTCTGGTATGATCTGTTTTACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000078834.12 ENSMUST00000114831.9 ENSMUST00000114833.10 ENSMUST00000114834.10 ENSMUST00000128156.9 ENSMUST00000135341.8 ENSMUST00000138349.8 |
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| CDS-3UTR CAA 90 bp | AGGCTCAGTAAAACAGATCATACCAGAGACCTCTATTATCACATTGGGCTTTCTTGGCCCTCACAGTCATaGGTACTGTTTCCATGGTTT | + |
|
Preference number: 5 (lower is better) Translates to: RLSKTDHTRDLYYHIGLSWPSQS*VLFPWF Trigger: AAACCATGGAAACAGTACCAATGACTGTGAGGGCCA...AGAAAGCCCAATGTGATAATAGAGGTCTCTGGTATGATCTGTTTTACTGAGCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000078834.12 ENSMUST00000114831.9 ENSMUST00000114833.10 ENSMUST00000114834.10 ENSMUST00000128156.9 ENSMUST00000135341.8 ENSMUST00000138349.8 |
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| CDS-3UTR CAA 90 bp | AAACAGATCATACCAGAGACCTCTATTATCACATTGGGCTTTCTCCTGTGTCCAACATTTGTGTTCTTGTaGATCACACACTCAATCAGG | + |
|
Preference number: 5 (lower is better) Translates to: KQIIPETSIITLGFLLCPTFVFL*ITHSIR Trigger: CCTGATTGAGTGTGTGATCAACAAGAACACAAATGT...TGGACACAGGAGAAAGCCCAATGTGATAATAGAGGTCTCTGGTATGATCTGTTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078834.12 ENSMUST00000114831.9 ENSMUST00000114833.10 ENSMUST00000114834.10 |
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| CDS CCA 72 bp | GGCTGTAGGCTCCAAGGTCATTGTTGCTGCAAGAGATaGGGCTCGGGAGGACTTGTGACTGCCTGTCCCTGT | + |
|
Preference number: 6 (lower is better) Translates to: GCRLQGHCCCKR*GSGGLVTACPC Trigger: ACAGGGACAGGCAGTCACAAGTCCTCCCGAGCCCCATCTCTTGCAGCAACAATGACCTTGGAGCCTACAGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000078834.12 ENSMUST00000114831.9 ENSMUST00000123600.5 ENSMUST00000128156.9 ENSMUST00000135341.8 ENSMUST00000138349.8 ENSMUST00000148748.8 |
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| CDS TCA 72 bp | CCTCAACACGGCACGGCTGAGAAGGCTGCCTTGATTTaGTGTACCAGGCCAGGAAAGCCATCACAACCCCTG | + |
|
Preference number: 6 (lower is better) Translates to: PQHGTAEKAALI*CTRPGKPSQPL Trigger: CAGGGGTTGTGATGGCTTTCCTGGCCTGGTACATCAAATCAAGGCAGCCTTCTCAGCCGTGCCGTGTTGAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000078834.12 ENSMUST00000114831.9 ENSMUST00000114832.3 ENSMUST00000114833.10 ENSMUST00000114834.10 ENSMUST00000128156.9 ENSMUST00000135341.8 ENSMUST00000138349.8 |
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| CDS GCA 72 bp | TCGGGAGGACTTGTGACTGCCTGTCCCTGTAGTTCCTaGAGAAGTTGTTTGGGATGGTGTCAGCCTGGAGCC | + |
|
Preference number: 6 (lower is better) Translates to: SGGLVTACPCSS*RSCLGWCQPGA Trigger: GGCTCCAGGCTGACACCATCCCAAACAACTTCTGCAGGAACTACAGGGACAGGCAGTCACAAGTCCTCCCGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000078834.12 ENSMUST00000123600.5 ENSMUST00000128156.9 ENSMUST00000135341.8 ENSMUST00000138349.8 ENSMUST00000148748.8 |
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| CDS CAA 72 bp | TCTCTGGCTGTGAGGTCACCTTTGGTGTCACTACTGTaGGCACTGGACTGTAGTGAGCTAGGGAGGGGTCTC | + |
|
Preference number: 6 (lower is better) Translates to: SLAVRSPLVSLL*ALDCSELGRGL Trigger: GAGACCCCTCCCTAGCTCACTACAGTCCAGTGCCAACAGTAGTGACACCAAAGGTGACCTCACAGCCAGAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000078834.12 ENSMUST00000114831.9 ENSMUST00000114834.10 ENSMUST00000123600.5 ENSMUST00000138856.2 |
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| CDS CAA 72 bp | GTGACTGCCTGTCCCTGTAGTTCCTGCAGAAGTTGTTaGGGATGGTGTCAGCCTGGAGCCAGGCATAATAGC | + |
|
Preference number: 6 (lower is better) Translates to: VTACPCSSCRSC*GWCQPGARHNS Trigger: GCTATTATGCCTGGCTCCAGGCTGACACCATCCCAAACAACTTCTGCAGGAACTACAGGGACAGGCAGTCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000078834.12 ENSMUST00000123600.5 ENSMUST00000128156.9 ENSMUST00000135341.8 ENSMUST00000138349.8 ENSMUST00000148748.8 |
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| CDS CAA 90 bp | GGAGGACTTGTGACTGCCTGTCCCTGTAGTTCCTGCAGAAGTTGTTaGGGATGGTGTCAGCCTGGAGCCAGGCATAATAGCTGTCTCTGT | + |
|
Preference number: 6 (lower is better) Translates to: GGLVTACPCSSCRSC*GWCQPGARHNSCLC Trigger: ACAGAGACAGCTATTATGCCTGGCTCCAGGCTGACACCATCCCAAACAACTTCTGCAGGAACTACAGGGACAGGCAGTCACAAGTCCTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000078834.12 ENSMUST00000123600.5 ENSMUST00000128156.9 ENSMUST00000135341.8 ENSMUST00000138349.8 ENSMUST00000148748.8 |
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| CDS CAA 90 bp | CCTGCACCAACCAAGAGGACCGATGTAGAGATGGCCATGATGCACTaGAGGCTGGGAGTTGTCCAGTGGGCAACATTTGTGTTCTTGTTG | + |
|
Preference number: 6 (lower is better) Translates to: PAPTKRTDVEMAMMH*RLGVVQWATFVFLL Trigger: CAACAAGAACACAAATGTTGCCCACTGGACAACTCCCAGCCTCAAGTGCATCATGGCCATCTCTACATCGGTCCTCTTGGTTGGTGCAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114832.3 |
||
| CDS CCA 72 bp | CGCAGATCTTGGCTGGCTTTCGTCATTTTGGAACTGTaGGGAGAAATCTCTGTTATCCTGAGGGAGGTGGAG | + |
|
Preference number: 6 (lower is better) Translates to: RRSWLAFVILEL*GEISVILREVE Trigger: CTCCACCTCCCTCAGGATAACAGAGATTTCTCCCCACAGTTCCAAAATGACGAAAGCCAGCCAAGATCTGCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000123600.5 ENSMUST00000148748.8 |
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| CDS CAA 90 bp | ATGCACTTGAGGCTGGGAGTTGTCCAGTGGGCAACATTTGTGTTCTaGTTGATCACACACTCAATCAGGGTGGATGTTCCAGCTTTCCGC | + |
|
Preference number: 6 (lower is better) Translates to: MHLRLGVVQWATFVF*LITHSIRVDVPAFR Trigger: GCGGAAAGCTGGAACATCCACCCTGATTGAGTGTGTGATCAACAAGAACACAAATGTTGCCCACTGGACAACTCCCAGCCTCAAGTGCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000078834.12 ENSMUST00000114831.9 ENSMUST00000114832.3 ENSMUST00000114833.10 ENSMUST00000114834.10 |
||
| CDS CAA 72 bp | CAGGGTACTCGCAGATCTTGGCTGGCTTTCGTCATTTaGGAACTGTGGGGAGAAATCTCTGTTATCCTGAGG | + |
|
Preference number: 6 (lower is better) Translates to: QGTRRSWLAFVI*ELWGEISVILR Trigger: CCTCAGGATAACAGAGATTTCTCCCCACAGTTCCAAAATGACGAAAGCCAGCCAAGATCTGCGAGTACCCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000123600.5 ENSMUST00000148748.8 |
||
| CDS CAA 90 bp | CACTTGAGGCTGGGAGTTGTCCAGTGGGCAACATTTGTGTTCTTGTaGATCACACACTCAATCAGGGTGGATGTTCCAGCTTTCCGCTTA | + |
|
Preference number: 6 (lower is better) Translates to: HLRLGVVQWATFVFL*ITHSIRVDVPAFRL Trigger: TAAGCGGAAAGCTGGAACATCCACCCTGATTGAGTGTGTGATCAACAAGAACACAAATGTTGCCCACTGGACAACTCCCAGCCTCAAGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000078834.12 ENSMUST00000114831.9 ENSMUST00000114832.3 ENSMUST00000114833.10 ENSMUST00000114834.10 |
||
| CDS CAA 72 bp | CTGGGAGTTGTCCAGTGGGCAACATTTGTGTTCTTGTaGATCACACACTCAATCAGGGTGGATGTTCCAGCT | + |
|
Preference number: 6 (lower is better) Translates to: LGVVQWATFVFL*ITHSIRVDVPA Trigger: AGCTGGAACATCCACCCTGATTGAGTGTGTGATCAACAAGAACACAAATGTTGCCCACTGGACAACTCCCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000078834.12 ENSMUST00000114831.9 ENSMUST00000114832.3 ENSMUST00000114833.10 ENSMUST00000114834.10 |
||
| CDS CAA 72 bp | AGGCTGGGAGTTGTCCAGTGGGCAACATTTGTGTTCTaGTTGATCACACACTCAATCAGGGTGGATGTTCCA | + |
|
Preference number: 6 (lower is better) Translates to: RLGVVQWATFVF*LITHSIRVDVP Trigger: TGGAACATCCACCCTGATTGAGTGTGTGATCAACAAGAACACAAATGTTGCCCACTGGACAACTCCCAGCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000078834.12 ENSMUST00000114831.9 ENSMUST00000114832.3 ENSMUST00000114833.10 ENSMUST00000114834.10 |
||
| CDS CAA 72 bp | AAGAGGACCGATGTAGAGATGGCCACTTTCGTCATTTaGGAACTGTGGGGAGAAATCTCTTTTGCAGAGGGG | + |
|
Preference number: 6 (lower is better) Translates to: KRTDVEMATFVI*ELWGEISFAEG Trigger: CCCCTCTGCAAAAGAGATTTCTCCCCACAGTTCCAAAATGACGAAAGTGGCCATCTCTACATCGGTCCTCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114834.10 |
||
| CDS CAA 72 bp | GTCATTTTGGAACTGTGGGGAGAAATCTTGATGCACTaGAGGCTGGGAGTTGTCCAGTGGGCAACATTTGTG | + |
|
Preference number: 6 (lower is better) Translates to: VILELWGEILMH*RLGVVQWATFV Trigger: CACAAATGTTGCCCACTGGACAACTCCCAGCCTCAAGTGCATCAAGATTTCTCCCCACAGTTCCAAAATGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114833.10 |
||
| CDS CAA 90 bp | GCCACTTTCGTCATTTTGGAACTGTGGGGAGAAATCTTGATGCACTaGAGGCTGGGAGTTGTCCAGTGGGCAACATTTGTGTTCTTGTTG | + |
|
Preference number: 6 (lower is better) Translates to: ATFVILELWGEILMH*RLGVVQWATFVFLL Trigger: CAACAAGAACACAAATGTTGCCCACTGGACAACTCCCAGCCTCAAGTGCATCAAGATTTCTCCCCACAGTTCCAAAATGACGAAAGTGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114833.10 |
||
| CDS TCA 72 bp | TGGGAGTTGTCCAGTGGGCAACATTTGTGTTCTTGTTaGTCACACACTCAATCAGGGTGGATGTTCCAGCTT | + |
|
Preference number: 6 (lower is better) Translates to: WELSSGQHLCSC*SHTQSGWMFQL Trigger: AAGCTGGAACATCCACCCTGATTGAGTGTGTGATCAACAAGAACACAAATGTTGCCCACTGGACAACTCCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000078834.12 ENSMUST00000114831.9 ENSMUST00000114832.3 ENSMUST00000114833.10 ENSMUST00000114834.10 |
||
| CDS CAA 72 bp | AAGAGGACCGATGTAGAGATGGCCACTTTCGTCATTTaGGAACTGTGGGGAGAAATCTCTGTTATCCTGAGG | + |
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Preference number: 6 (lower is better) Translates to: KRTDVEMATFVI*ELWGEISVILR Trigger: CCTCAGGATAACAGAGATTTCTCCCCACAGTTCCAAAATGACGAAAGTGGCCATCTCTACATCGGTCCTCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000078834.12 ENSMUST00000114831.9 ENSMUST00000128156.9 ENSMUST00000135341.8 ENSMUST00000138349.8 |
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| CDS TCA 72 bp | AGGCATAATAGCTGTCTCTGTGGTCATTGCGGTATCTaGTTTGGGAGAGAAAGCTTCTGGCTCTTTTGCAGA | + |
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Preference number: 6 (lower is better) Translates to: RHNSCLCGHCGI*FGRESFWLFCR Trigger: TCTGCAAAAGAGCCAGAAGCTTTCTCTCCCAAATCAGATACCGCAATGACCACAGAGACAGCTATTATGCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000078834.12 ENSMUST00000123600.5 |
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