Pregenerated sensors for IL13RA2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000031289Ensembl transcript IDs: ENSMUST00000033646.9, ENSMUST00000112827.2
Found 32 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CCA 90 bp | GAGATATATATCCAGCACTTTAGTCAAAAACCCAACACTATTAGGACAAACACTATGACTCCTGCTGGCTaGCTCTATGTCAAGAAATTG | + |
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Preference number: 2 (lower is better) Translates to: EIYIQHFSQKPNTIRTNTMTPAG*LYVKKL Trigger: CAATTTCTTGACATAGAGCCAGCCAGCAGGAGTCAT...AGTGTTTGTCCTAATAGTGTTGGGTTTTTGACTAAAGTGCTGGATATATATCTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033646.9 ENSMUST00000112827.2 |
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| CDS-3UTR TCA 90 bp | TTCGAAATTTTAAGAGAAATTGAGTTTAATATGACTCCTGCTGGCTGGCTCTATGCACACTGTAAGGCATaGTCCAAGCCCTCATACCAG | + |
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Preference number: 4 (lower is better) Translates to: FEILREIEFNMTPAGWLYAHCKA*SKPSYQ Trigger: CTGGTATGAGGGCTTGGATCATGCCTTACAGTGTGC...ATAGAGCCAGCCAGCAGGAGTCATATTAAACTCAATTTCTCTTAAAATTTCGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033646.9 ENSMUST00000112827.2 |
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| CDS-3UTR TCA 90 bp | GAGATATATATCCAGCACTTTAGTCAAAAACCCAACACTATTAGGACAAACACTGCACACTGTAAGGCATaGTCCAAGCCCTCATACCAG | + |
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Preference number: 4 (lower is better) Translates to: EIYIQHFSQKPNTIRTNTAHCKA*SKPSYQ Trigger: CTGGTATGAGGGCTTGGATCATGCCTTACAGTGTGC...AGTGTTTGTCCTAATAGTGTTGGGTTTTTGACTAAAGTGCTGGATATATATCTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033646.9 ENSMUST00000112827.2 |
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| CDS-3UTR CCA 90 bp | GTATTCGAAATTTTAAGAGAAATTGAGTTTAATATGACTCCTGCTGGCTGGCTCATAAGTGTAACACCTTaGTGGAATGGGTCCTCCAGG | + |
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Preference number: 4 (lower is better) Translates to: VFEILREIEFNMTPAGWLISVTP*WNGSSR Trigger: CCTGGAGGACCCATTCCACCAAGGTGTTACACTTAT...GAGCCAGCCAGCAGGAGTCATATTAAACTCAATTTCTCTTAAAATTTCGAATAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033646.9 ENSMUST00000112827.2 |
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| CDS-3UTR CCA 90 bp | ATTTTAAGAGAAATTGAGTTTAATATGACTCCTGCTGGCTGGCTCTATGTCAAGATAAGTGTAACACCTTaGTGGAATGGGTCCTCCAGG | + |
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Preference number: 4 (lower is better) Translates to: ILREIEFNMTPAGWLYVKISVTP*WNGSSR Trigger: CCTGGAGGACCCATTCCACCAAGGTGTTACACTTAT...CTTGACATAGAGCCAGCCAGCAGGAGTCATATTAAACTCAATTTCTCTTAAAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033646.9 ENSMUST00000112827.2 |
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| CDS-3UTR TCA 90 bp | GTATTCGAAATTTTAAGAGAAATTGAGTTTAATATGACTCCTGCTGGCTGGCTCGATGGGTTCCAACTTTaGAGATCCATTAACACAGAT | + |
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Preference number: 4 (lower is better) Translates to: VFEILREIEFNMTPAGWLDGFQL*RSINTD Trigger: ATCTGTGTTAATGGATCTTCAAAGTTGGAACCCATC...GAGCCAGCCAGCAGGAGTCATATTAAACTCAATTTCTCTTAAAATTTCGAATAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033646.9 ENSMUST00000112827.2 |
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| CDS-3UTR TCA 90 bp | ATTTTAAGAGAAATTGAGTTTAATATGACTCCTGCTGGCTGGCTCTATGTCAAGTATGAAAATAATCTTTaGGTCTGGCCCTGTGTAACC | + |
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Preference number: 4 (lower is better) Translates to: ILREIEFNMTPAGWLYVKYENNL*VWPCVT Trigger: GGTTACACAGGGCCAGACTCAAAGATTATTTTCATA...CTTGACATAGAGCCAGCCAGCAGGAGTCATATTAAACTCAATTTCTCTTAAAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033646.9 ENSMUST00000112827.2 |
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| CDS-3UTR TCA 90 bp | GAAATTTTAAGAGAAATTGAGTTTAATATGACTCCTGCTGGCTGGCTCTATGTCTATGAAAATAATCTTTaGGTCTGGCCCTGTGTAACC | + |
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Preference number: 4 (lower is better) Translates to: EILREIEFNMTPAGWLYVYENNL*VWPCVT Trigger: GGTTACACAGGGCCAGACTCAAAGATTATTTTCATA...GACATAGAGCCAGCCAGCAGGAGTCATATTAAACTCAATTTCTCTTAAAATTTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033646.9 ENSMUST00000112827.2 |
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| CDS-3UTR TCA 90 bp | GATGTATTCGAAATTTTAAGAGAAATTGAGTTTAATATGACTCCTGCTGGCTGGGATGGGTTCCAACTTTaGAGATCCATTAACACAGAT | + |
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Preference number: 4 (lower is better) Translates to: DVFEILREIEFNMTPAGWDGFQL*RSINTD Trigger: ATCTGTGTTAATGGATCTTCAAAGTTGGAACCCATC...CCAGCCAGCAGGAGTCATATTAAACTCAATTTCTCTTAAAATTTCGAATACATC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033646.9 ENSMUST00000112827.2 |
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| CDS-3UTR TCA 90 bp | GAGATATATATCCAGCACTTTAGTCAAAAACCCAACACTATTAGGACAAACACTTTCTCCACACTAATATaGAGGAATTCTGGTGGCAAT | + |
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Preference number: 4 (lower is better) Translates to: EIYIQHFSQKPNTIRTNTFSTLI*RNSGGN Trigger: ATTGCCACCAGAATTCCTTCATATTAGTGTGGAGAA...AGTGTTTGTCCTAATAGTGTTGGGTTTTTGACTAAAGTGCTGGATATATATCTC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033646.9 ENSMUST00000112827.2 |
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| CDS-3UTR GCA 90 bp | GAGATATATATCCAGCACTTTAGTCAAAAACCCAACACTATTAGGACAAACACTCAATGCTCTGACAAATaGGTACGTATCTTTCCTTCA | + |
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Preference number: 4 (lower is better) Translates to: EIYIQHFSQKPNTIRTNTQCSDK*VRIFPS Trigger: TGAAGGAAAGATACGTACGCATTTGTCAGAGCATTG...AGTGTTTGTCCTAATAGTGTTGGGTTTTTGACTAAAGTGCTGGATATATATCTC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033646.9 ENSMUST00000112827.2 |
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| CDS-3UTR GCA 90 bp | GATGTATTCGAAATTTTAAGAGAAATTGAGTTTAATATGACTCCTGCTGGCTGGCAATGCTCTGACAAATaGGTACGTATCTTTCCTTCA | + |
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Preference number: 4 (lower is better) Translates to: DVFEILREIEFNMTPAGWQCSDK*VRIFPS Trigger: TGAAGGAAAGATACGTACGCATTTGTCAGAGCATTG...CCAGCCAGCAGGAGTCATATTAAACTCAATTTCTCTTAAAATTTCGAATACATC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033646.9 ENSMUST00000112827.2 |
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| CDS-3UTR GCA 90 bp | TTCGAAATTTTAAGAGAAATTGAGTTTAATATGACTCCTGCTGGCTGGCTCTATGATCCATTTGTACAATaGTCTGACAAATGCGTACGT | + |
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Preference number: 4 (lower is better) Translates to: FEILREIEFNMTPAGWLYDPFVQ*SDKCVR Trigger: ACGTACGCATTTGTCAGAGCATTGTACAAATGGATC...ATAGAGCCAGCCAGCAGGAGTCATATTAAACTCAATTTCTCTTAAAATTTCGAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033646.9 ENSMUST00000112827.2 |
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| CDS-3UTR GCA 90 bp | GATGTATTCGAAATTTTAAGAGAAATTGAGTTTAATATGACTCCTGCTGGCTGGGATCCATTTGTACAATaGTCTGACAAATGCGTACGT | + |
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Preference number: 4 (lower is better) Translates to: DVFEILREIEFNMTPAGWDPFVQ*SDKCVR Trigger: ACGTACGCATTTGTCAGAGCATTGTACAAATGGATC...CCAGCCAGCAGGAGTCATATTAAACTCAATTTCTCTTAAAATTTCGAATACATC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033646.9 ENSMUST00000112827.2 |
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| CDS CCA 90 bp | CACTTTCATTTGCTCTCCTCTTCAACTTCATATCGTTTTTGTCTGTaGCAGACTCCCAGGAAATATCGTCTTCTCGGATCACAATTTCAT | + |
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Preference number: 5 (lower is better) Translates to: HFHLLSSSTSYRFCL*QTPRKYRLLGSQFH Trigger: ATGAAATTGTGATCCGAGAAGACGATATTTCCTGGGAGTCTGCCACAGACAAAAACGATATGAAGTTGAAGAGGAGAGCAAATGAAAGTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033646.9 ENSMUST00000112827.2 |
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| CDS-3UTR CAA 90 bp | ATTTTAAGAGAAATTGAGTTTAATATGACTCCTGCTGGCTGGCTCTATGTCAAGTCAGAATATACTGTCTaGCCAGGTTTCCAAGAGCAG | + |
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Preference number: 5 (lower is better) Translates to: ILREIEFNMTPAGWLYVKSEYTV*PGFQEQ Trigger: CTGCTCTTGGAAACCTGGCAAGACAGTATATTCTGA...CTTGACATAGAGCCAGCCAGCAGGAGTCATATTAAACTCAATTTCTCTTAAAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033646.9 ENSMUST00000112827.2 |
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| CDS-3UTR CAA 90 bp | GTATTCGAAATTTTAAGAGAAATTGAGTTTAATATGACTCCTGCTGGCTGGCTCCACAGGAGGTTTCCATaGCAAATAGAGATAACCAAG | + |
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Preference number: 5 (lower is better) Translates to: VFEILREIEFNMTPAGWLHRRFP*QIEITK Trigger: CTTGGTTATCTCTATTTGCAATGGAAACCTCCTGTG...GAGCCAGCCAGCAGGAGTCATATTAAACTCAATTTCTCTTAAAATTTCGAATAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033646.9 ENSMUST00000112827.2 |
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| CDS GCA 90 bp | CATGGACTTTGTACTTCTGATCCATTTGTACAATGCTCTGACAAATaGGTACGTATCTTTCCTTCAATGCCTTTATTAAGATCAAACCCA | + |
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Preference number: 5 (lower is better) Translates to: HGLCTSDPFVQCSDK*VRIFPSMPLLRSNP Trigger: TGGGTTTGATCTTAATAAAGGCATTGAAGGAAAGATACGTACGCATTTGTCAGAGCATTGTACAAATGGATCAGAAGTACAAAGTCCATG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033646.9 ENSMUST00000112827.2 |
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| CDS GCA 90 bp | GAAGCTTCTATCCATGGACTTTGTACTTCTGATCCATTTGTACAATaGTCTGACAAATGCGTACGTATCTTTCCTTCAATGCCTTTATTA | + |
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Preference number: 5 (lower is better) Translates to: EASIHGLCTSDPFVQ*SDKCVRIFPSMPLL Trigger: TAATAAAGGCATTGAAGGAAAGATACGTACGCATTTGTCAGAGCATTGTACAAATGGATCAGAAGTACAAAGTCCATGGATAGAAGCTTC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033646.9 ENSMUST00000112827.2 |
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| CDS-3UTR CAA 90 bp | GAGATATATATCCAGCACTTTAGTCAAAAACCCAACACTATTAGGACAAACACTCACAGGAGGTTTCCATaGCAAATAGAGATAACCAAG | + |
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Preference number: 5 (lower is better) Translates to: EIYIQHFSQKPNTIRTNTHRRFP*QIEITK Trigger: CTTGGTTATCTCTATTTGCAATGGAAACCTCCTGTG...AGTGTTTGTCCTAATAGTGTTGGGTTTTTGACTAAAGTGCTGGATATATATCTC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033646.9 ENSMUST00000112827.2 |
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| CDS-3UTR CAA 90 bp | GTATTCGAAATTTTAAGAGAAATTGAGTTTAATATGACTCCTGCTGGCTGGCTCGTACTTCTGATCCATTaGTACAATGCTCTGACAAAT | + |
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Preference number: 5 (lower is better) Translates to: VFEILREIEFNMTPAGWLVLLIH*YNALTN Trigger: ATTTGTCAGAGCATTGTACAAATGGATCAGAAGTAC...GAGCCAGCCAGCAGGAGTCATATTAAACTCAATTTCTCTTAAAATTTCGAATAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033646.9 ENSMUST00000112827.2 |
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| CDS-3UTR CAA 90 bp | TTCGAAATTTTAAGAGAAATTGAGTTTAATATGACTCCTGCTGGCTGGCTCTATGTACTTCTGATCCATTaGTACAATGCTCTGACAAAT | + |
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Preference number: 5 (lower is better) Translates to: FEILREIEFNMTPAGWLYVLLIH*YNALTN Trigger: ATTTGTCAGAGCATTGTACAAATGGATCAGAAGTAC...ATAGAGCCAGCCAGCAGGAGTCATATTAAACTCAATTTCTCTTAAAATTTCGAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033646.9 ENSMUST00000112827.2 |
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| CDS CCA 72 bp | GTCTTCTCGGATCACAATTTCATAAGTGTAACACCTTaGTGGAATGGGTCCTCCAGGTGTGCTCCATTTCAT | + |
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Preference number: 6 (lower is better) Translates to: VFSDHNFISVTP*WNGSSRCAPFH Trigger: ATGAAATGGAGCACACCTGGAGGACCCATTCCACCAAGGTGTTACACTTATGAAATTGTGATCCGAGAAGAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033646.9 ENSMUST00000112827.2 |
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| CDS CCA 72 bp | TTGCTCTCCTCTTCAACTTCATATCGTTTTTGTCTGTaGCAGACTCCCAGGAAATATCGTCTTCTCGGATCA | + |
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Preference number: 6 (lower is better) Translates to: LLSSSTSYRFCL*QTPRKYRLLGS Trigger: TGATCCGAGAAGACGATATTTCCTGGGAGTCTGCCACAGACAAAAACGATATGAAGTTGAAGAGGAGAGCAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033646.9 ENSMUST00000112827.2 |
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| CDS CAA 90 bp | AGGTCTTCACTTTCATTTGCTCTCCTCTTCAACTTCATATCGTTTTaGTCTGTGGCAGACTCCCAGGAAATATCGTCTTCTCGGATCACA | + |
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Preference number: 6 (lower is better) Translates to: RSSLSFALLFNFISF*SVADSQEISSSRIT Trigger: TGTGATCCGAGAAGACGATATTTCCTGGGAGTCTGCCACAGACAAAAACGATATGAAGTTGAAGAGGAGAGCAAATGAAAGTGAAGACCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033646.9 ENSMUST00000112827.2 |
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| CDS CAA 90 bp | TCCCATAAGAAGCTTCTATCCATGGACTTTGTACTTCTGATCCATTaGTACAATGCTCTGACAAATGCGTACGTATCTTTCCTTCAATGC | + |
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Preference number: 6 (lower is better) Translates to: SHKKLLSMDFVLLIH*YNALTNAYVSFLQC Trigger: GCATTGAAGGAAAGATACGTACGCATTTGTCAGAGCATTGTACAAATGGATCAGAAGTACAAAGTCCATGGATAGAAGCTTCTTATGGGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033646.9 ENSMUST00000112827.2 |
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| CDS GCA 72 bp | AAAACATGGTATAGTTGGTATCAGAATATACTGTCTTaGCAGGTTTCCAAGAGCAGACCAAATACTGCCAGT | + |
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Preference number: 6 (lower is better) Translates to: KTWYSWYQNILS*QVSKSRPNTAS Trigger: ACTGGCAGTATTTGGTCTGCTCTTGGAAACCTGGCAAGACAGTATATTCTGATACCAACTATACCATGTTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033646.9 ENSMUST00000112827.2 |
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| CDS CAA 72 bp | AAGCTTCTATCCATGGACTTTGTACTTCTGATCCATTaGTACAATGCTCTGACAAATGCGTACGTATCTTTC | + |
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Preference number: 6 (lower is better) Translates to: KLLSMDFVLLIH*YNALTNAYVSF Trigger: GAAAGATACGTACGCATTTGTCAGAGCATTGTACAAATGGATCAGAAGTACAAAGTCCATGGATAGAAGCTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033646.9 ENSMUST00000112827.2 |
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| CDS TCA 72 bp | CATGTCCTGAATTTTAGTTTCCAAACTTCCTTCATCTaGTATCCCATAAGAAGCTTCTATCCATGGACTTTG | + |
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Preference number: 6 (lower is better) Translates to: HVLNFSFQTSFI*YPIRSFYPWTL Trigger: CAAAGTCCATGGATAGAAGCTTCTTATGGGATATCAGATGAAGGAAGTTTGGAAACTAAAATTCAGGACATG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033646.9 ENSMUST00000112827.2 |
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| CDS CAA 90 bp | CACACTAATATGAAGGAATTCTGGTGGCAATGGTTTAACTATATTTaGAAGTTGAAAAACTGTATAGCTGGATCTGATGGGTTCCAACTT | + |
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Preference number: 6 (lower is better) Translates to: HTNMKEFWWQWFNYI*KLKNCIAGSDGFQL Trigger: AAGTTGGAACCCATCAGATCCAGCTATACAGTTTTTCAACTTCAAAATATAGTTAAACCATTGCCACCAGAATTCCTTCATATTAGTGTG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033646.9 ENSMUST00000112827.2 |
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| CDS GCA 72 bp | TGTACTTCTGATCCATTTGTACAATGCTCTGACAAATaGGTACGTATCTTTCCTTCAATGCCTTTATTAAGA | + |
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Preference number: 6 (lower is better) Translates to: CTSDPFVQCSDK*VRIFPSMPLLR Trigger: TCTTAATAAAGGCATTGAAGGAAAGATACGTACGCATTTGTCAGAGCATTGTACAAATGGATCAGAAGTACA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033646.9 ENSMUST00000112827.2 |
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| CDS CAA 72 bp | ATGAAGGAATTCTGGTGGCAATGGTTTAACTATATTTaGAAGTTGAAAAACTGTATAGCTGGATCTGATGGG | + |
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Preference number: 6 (lower is better) Translates to: MKEFWWQWFNYI*KLKNCIAGSDG Trigger: CCCATCAGATCCAGCTATACAGTTTTTCAACTTCAAAATATAGTTAAACCATTGCCACCAGAATTCCTTCAT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033646.9 ENSMUST00000112827.2 |
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