Pregenerated sensors for IL13RA1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000017057Ensembl transcript IDs: ENSMUST00000033418.8
Found 99 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TTGGTGGAGAAGTTGCCCATGACTTTTCTGTATGTGTCATTGCCTTaGCCCAAGATGATTTCTGGAAATTTCAAAGCAGAGGAAAATGCT | + |
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Preference number: 1 (lower is better) Translates to: LVEKLPMTFLYVSLP*PKMISGNFKAEENA Trigger: AGCATTTTCCTCTGCTTTGAAATTTCCAGAAATCATCTTGGGCCAAGGCAATGACACATACAGAAAAGTCATGGGCAACTTCTCCACCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033418.8 |
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| 3UTR TCA 90 bp | TTATGCATCCCTTCAGTGCCCAGATTCAGAAAAAGGTCATCTGAATaGAAGAAAAGGAATGGTCCTCCTTATGTTGGGTTTACTTATGTA | + |
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Preference number: 1 (lower is better) Translates to: LCIPSVPRFRKRSSE*KKRNGPPYVGFTYV Trigger: TACATAAGTAAACCCAACATAAGGAGGACCATTCCTTTTCTTTCATTCAGATGACCTTTTTCTGAATCTGGGCACTGAAGGGATGCATAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033418.8 |
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| 3UTR GCA 90 bp | CTGAAAGAGAATTTGAAGCAAAATATGATGTCTTTGTTCCCATGCTaGAAGACTGTCAGCATAGATGGTTTCCACAGCATTTCAAAACAT | + |
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Preference number: 1 (lower is better) Translates to: LKENLKQNMMSLFPC*KTVSIDGFHSISKH Trigger: ATGTTTTGAAATGCTGTGGAAACCATCTATGCTGACAGTCTTGCAGCATGGGAACAAAGACATCATATTTTGCTTCAAATTCTCTTTCAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033418.8 |
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| 3UTR CCA 90 bp | AAATATGATGTCTTTGTTCCCATGCTGCAAGACTGTCAGCATAGATaGTTTCCACAGCATTTCAAAACATGCTCTTTACCACCATTAAAA | + |
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Preference number: 1 (lower is better) Translates to: KYDVFVPMLQDCQHR*FPQHFKTCSLPPLK Trigger: TTTTAATGGTGGTAAAGAGCATGTTTTGAAATGCTGTGGAAACCATCTATGCTGACAGTCTTGCAGCATGGGAACAAAGACATCATATTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033418.8 |
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| 3UTR GCA 90 bp | AGTTTCAGTTTCTATTTAACAAGTCCCCAGATAACAAATGGAGAATaGAATAAATCTTCACAGGGTCACATTGAAGGCAAGAAAGAAATC | + |
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Preference number: 1 (lower is better) Translates to: SFSFYLTSPQITNGE*NKSSQGHIEGKKEI Trigger: GATTTCTTTCTTGCCTTCAATGTGACCCTGTGAAGATTTATTGCATTCTCCATTTGTTATCTGGGGACTTGTTAAATAGAAACTGAAACT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033418.8 |
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| 3UTR-3UTR GCA 90 bp | CCTGTGGAGAGCAGGGTCTCTTATCTTCCCTGCTTAAGAACAAAAGACACAAGTTGGTTCCAACTCGAATaGTACCTCATTCTGCATCCA | + |
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Preference number: 2 (lower is better) Translates to: PVESRVSYLPCLRTKDTSWFQLE*YLILHP Trigger: TGGATGCAGAATGAGGTAGCATTCGAGTTGGAACCA...ACTTGTGTCTTTTGTTCTTAAGCAGGGAAGATAAGAGACCCTGCTCTCCACAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033418.8 |
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| 3UTR-3UTR CCA 90 bp | CAGGCACAGTGGGACATAAGCATAGAAGATGGGAAGTTCAAAAGTCCAGGAAATATATATGTAAACCCATaGGTGGGGGTCCTATCCCTC | + |
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Preference number: 2 (lower is better) Translates to: QAQWDISIEDGKFKSPGNIYVNP*VGVLSL Trigger: GAGGGATAGGACCCCCACCCATGGGTTTACATATAT...ATTTCCTGGACTTTTGAACTTCCCATCTTCTATGCTTATGTCCCACTGTGCCTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033418.8 |
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| 3UTR CAA 90 bp | TCAGCCTTGGTGGAGAAGTTGCCCATGACTTTTCTGTATGTGTCATaGCCTTGGCCCAAGATGATTTCTGGAAATTTCAAAGCAGAGGAA | + |
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Preference number: 2 (lower is better) Translates to: SALVEKLPMTFLYVS*PWPKMISGNFKAEE Trigger: TTCCTCTGCTTTGAAATTTCCAGAAATCATCTTGGGCCAAGGCAATGACACATACAGAAAAGTCATGGGCAACTTCTCCACCAAGGCTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033418.8 |
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| 3UTR-3UTR TCA 90 bp | AAACTGCAATATCTAAGATGCCTGTATCCCAGCTGCAAGCTGATACCCAAAAGGGAACTCTGCTTTTCTTaGAGAGCTCCTTTGGTTTGG | + |
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Preference number: 2 (lower is better) Translates to: KLQYLRCLYPSCKLIPKRELCFS*RAPLVW Trigger: CCAAACCAAAGGAGCTCTTCAAGAAAAGCAGAGTTC...CCTTTTGGGTATCAGCTTGCAGCTGGGATACAGGCATCTTAGATATTGCAGTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033418.8 |
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| 3UTR CAA 90 bp | CTTGGTGGAGAAGTTGCCCATGACTTTTCTGTATGTGTCATTGCCTaGGCCCAAGATGATTTCTGGAAATTTCAAAGCAGAGGAAAATGC | + |
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Preference number: 2 (lower is better) Translates to: LGGEVAHDFSVCVIA*AQDDFWKFQSRGKC Trigger: GCATTTTCCTCTGCTTTGAAATTTCCAGAAATCATCTTGGGCCAAGGCAATGACACATACAGAAAAGTCATGGGCAACTTCTCCACCAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033418.8 |
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| 3UTR-3UTR TCA 90 bp | CAGGCACAGTGGGACATAAGCATAGAAGATGGGAAGTTCAAAAGTCCAGGAAATTGGAGAAGTTGCCCATaGCTTTTCTGTATGTGTCAT | + |
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Preference number: 2 (lower is better) Translates to: QAQWDISIEDGKFKSPGNWRSCP*LFCMCH Trigger: ATGACACATACAGAAAAGTCATGGGCAACTTCTCCA...ATTTCCTGGACTTTTGAACTTCCCATCTTCTATGCTTATGTCCCACTGTGCCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033418.8 |
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| 3UTR-3UTR CCA 90 bp | AAACTGCAATATCTAAGATGCCTGTATCCCAGCTGCAAGCTGATACCCAAAAGGTATGTGTCATTGCCTTaGCCCAAGATGATTTCTGGA | + |
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Preference number: 2 (lower is better) Translates to: KLQYLRCLYPSCKLIPKRYVSLP*PKMISG Trigger: TCCAGAAATCATCTTGGGCCAAGGCAATGACACATA...CCTTTTGGGTATCAGCTTGCAGCTGGGATACAGGCATCTTAGATATTGCAGTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033418.8 |
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| 3UTR-3UTR CCA 90 bp | TACCAACCTGTGGAGAGCAGGGTCTCTTATCTTCCCTGCTTAAGAACAAAAGACCAAAAGTCCAGGAAATaGCTATCCGGAGATAAAGAA | + |
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Preference number: 2 (lower is better) Translates to: YQPVESRVSYLPCLRTKDQKSRK*LSGDKE Trigger: TTCTTTATCTCCGGATAGCCATTTCCTGGACTTTTG...GTCTTTTGTTCTTAAGCAGGGAAGATAAGAGACCCTGCTCTCCACAGGTTGGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033418.8 |
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| 3UTR-3UTR TCA 90 bp | CAGGCACAGTGGGACATAAGCATAGAAGATGGGAAGTTCAAAAGTCCAGGAAATAGCCATCACAATTCCTaGTTAGATGAATTGATGGTC | + |
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Preference number: 2 (lower is better) Translates to: QAQWDISIEDGKFKSPGNSHHNS*LDELMV Trigger: GACCATCAATTCATCTAATCAGGAATTGTGATGGCT...ATTTCCTGGACTTTTGAACTTCCCATCTTCTATGCTTATGTCCCACTGTGCCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033418.8 |
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| 3UTR-3UTR TCA 90 bp | CCTGTGGAGAGCAGGGTCTCTTATCTTCCCTGCTTAAGAACAAAAGACACAAGTAATAAAACACAGAATTaGCAGGACCACTTACAGCAT | + |
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Preference number: 2 (lower is better) Translates to: PVESRVSYLPCLRTKDTSNKTQN*QDHLQH Trigger: ATGCTGTAAGTGGTCCTGTCAATTCTGTGTTTTATT...ACTTGTGTCTTTTGTTCTTAAGCAGGGAAGATAAGAGACCCTGCTCTCCACAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033418.8 |
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| 3UTR-3UTR CCA 90 bp | AAACTGCAATATCTAAGATGCCTGTATCCCAGCTGCAAGCTGATACCCAAAAGGAGCAGAAATGAAAGGTaGGCATACATCATTAGAGTC | + |
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Preference number: 2 (lower is better) Translates to: KLQYLRCLYPSCKLIPKRSRNER*AYIIRV Trigger: GACTCTAATGATGTATGCCCACCTTTCATTTCTGCT...CCTTTTGGGTATCAGCTTGCAGCTGGGATACAGGCATCTTAGATATTGCAGTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033418.8 |
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| 3UTR-3UTR TCA 90 bp | TTTTGTTTGCTAGATGTTCTGTGGGAATCTAGTACAGCATTAGTGTACACACCCTTCACAGGGTCACATTaGAGGCAAGAAAGAAATCAC | + |
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Preference number: 2 (lower is better) Translates to: FCLLDVLWESSTALVYTPFTGSH*RQERNH Trigger: GTGATTTCTTTCTTGCCTTCAATGTGACCCTGTGAA...GGGTGTGTACACTAATGCTGTACTAGATTCCCACAGAACATCTAGCAAACAAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033418.8 |
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| 3UTR-3UTR GCA 90 bp | CAAACAATAGGCAGCAGATTGTATCAGTTTTGTTTGCTAGATGTTCTGTGGGAAGTGGCTCTTAGGAGCTaGCTGTTTTTCAAGAGTAGT | + |
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Preference number: 2 (lower is better) Translates to: QTIGSRLYQFCLLDVLWEVALRS*LFFKSS Trigger: ACTACTCTTGAAAAACAGGCAGCTCCTAAGAGCCAC...TTCCCACAGAACATCTAGCAAACAAAACTGATACAATCTGCTGCCTATTGTTTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033418.8 |
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| 3UTR-3UTR GCA 90 bp | CAGGCACAGTGGGACATAAGCATAGAAGATGGGAAGTTCAAAAGTCCAGGAAATGGTTTGGATTTTCAATaGAAAAGTCACATCAAGACC | + |
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Preference number: 2 (lower is better) Translates to: QAQWDISIEDGKFKSPGNGLDFQ*KSHIKT Trigger: GGTCTTGATGTGACTTTTGCATTGAAAATCCAAACC...ATTTCCTGGACTTTTGAACTTCCCATCTTCTATGCTTATGTCCCACTGTGCCTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000033418.8 |
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| 3UTR-3UTR CCA 90 bp | AAACTGCAATATCTAAGATGCCTGTATCCCAGCTGCAAGCTGATACCCAAAAGGAGAGCTCCTTTGGTTTaGATTTTCAATGCAAAAGTC | + |
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Preference number: 2 (lower is better) Translates to: KLQYLRCLYPSCKLIPKRRAPLV*IFNAKV Trigger: GACTTTTGCATTGAAAATCCAAACCAAAGGAGCTCT...CCTTTTGGGTATCAGCTTGCAGCTGGGATACAGGCATCTTAGATATTGCAGTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000033418.8 |
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| 3UTR-3UTR CCA 90 bp | TACCAACCTGTGGAGAGCAGGGTCTCTTATCTTCCCTGCTTAAGAACAAAAGACATTTGCAGAAATGGTTaGAATGGGGATATATATGCT | + |
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Preference number: 2 (lower is better) Translates to: YQPVESRVSYLPCLRTKDICRNG*NGDIYA Trigger: AGCATATATATCCCCATTCCAACCATTTCTGCAAAT...GTCTTTTGTTCTTAAGCAGGGAAGATAAGAGACCCTGCTCTCCACAGGTTGGTA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033418.8 |
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| 3UTR CAA 90 bp | GCTATTGTACTACTGAAAGAGAATTTGAAGCAAAATATGATGTCTTaGTTCCCATGCTGCAAGACTGTCAGCATAGATGGTTTCCACAGC | + |
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Preference number: 2 (lower is better) Translates to: AIVLLKENLKQNMMS*FPCCKTVSIDGFHS Trigger: GCTGTGGAAACCATCTATGCTGACAGTCTTGCAGCATGGGAACAAAGACATCATATTTTGCTTCAAATTCTCTTTCAGTAGTACAATAGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033418.8 |
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| 3UTR-3UTR GCA 90 bp | AAAGGTCATCTGAATGAAAGAAAAGGAATGGTCCTCCTTATGTTGGGTTTACTTTCTTTGTTCCCATGCTaGAAGACTGTCAGCATAGAT | + |
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Preference number: 2 (lower is better) Translates to: KGHLNERKGMVLLMLGLLSLFPC*KTVSID Trigger: ATCTATGCTGACAGTCTTGCAGCATGGGAACAAAGA...AAGTAAACCCAACATAAGGAGGACCATTCCTTTTCTTTCATTCAGATGACCTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033418.8 |
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| 3UTR-3UTR CCA 90 bp | AAAGGTCATCTGAATGAAAGAAAAGGAATGGTCCTCCTTATGTTGGGTTTACTTGCCCAAGATGATTTCTaGAAATTTCAAAGCAGAGGA | + |
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Preference number: 2 (lower is better) Translates to: KGHLNERKGMVLLMLGLLAQDDF*KFQSRG Trigger: TCCTCTGCTTTGAAATTTCCAGAAATCATCTTGGGC...AAGTAAACCCAACATAAGGAGGACCATTCCTTTTCTTTCATTCAGATGACCTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033418.8 |
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| 3UTR-3UTR CCA 90 bp | AAAGGTCATCTGAATGAAAGAAAAGGAATGGTCCTCCTTATGTTGGGTTTACTTCTTTGTCCTCTAGTTTaGAGATTTGGCAAAACATCT | + |
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Preference number: 2 (lower is better) Translates to: KGHLNERKGMVLLMLGLLLCPLV*RFGKTS Trigger: AGATGTTTTGCCAAATCTCCAAACTAGAGGACAAAG...AAGTAAACCCAACATAAGGAGGACCATTCCTTTTCTTTCATTCAGATGACCTTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033418.8 |
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| 3UTR-3UTR TCA 90 bp | CCTCTCACTGTTTTAAATTTGCAGAAATGGTTGGAATGGGGATATATATGCTTATGTACACACCCCAAATaGATTTCCTCACAAGAAAAA | + |
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Preference number: 2 (lower is better) Translates to: PLTVLNLQKWLEWGYICLCTHPK*ISSQEK Trigger: TTTTTCTTGTGAGGAAATTCATTTGGGGTGTGTACA...TAAGCATATATATCCCCATTCCAACCATTTCTGCAAATTTAAAACAGTGAGAGG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000033418.8 |
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| 3UTR CCA 72 bp | GGGGGAGCAGGCACAGTGGGACATAAGCATAGAAGATaGGAAGTTCAAAAGTCCAGGAAATGGCTATCCGGA | + |
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Preference number: 3 (lower is better) Translates to: GGAGTVGHKHRR*EVQKSRKWLSG Trigger: TCCGGATAGCCATTTCCTGGACTTTTGAACTTCCCATCTTCTATGCTTATGTCCCACTGTGCCTGCTCCCCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033418.8 |
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| 3UTR TCA 72 bp | ACCTGTGCATCAATTGTGCCGTGCTCCAATAGTTCCTaGAATTCCAGGCACAATGCTCCTCTACTACCACAG | + |
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Preference number: 3 (lower is better) Translates to: TCASIVPCSNSS*NSRHNAPLLPQ Trigger: CTGTGGTAGTAGAGGAGCATTGTGCCTGGAATTTCAGGAACTATTGGAGCACGGCACAATTGATGCACAGGT 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033418.8 |
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| 3UTR CCA 72 bp | AAGGCTACAAGAAAGAGGATGGGGGAGCAGGCACAGTaGGACATAAGCATAGAAGATGGGAAGTTCAAAAGT | + |
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Preference number: 3 (lower is better) Translates to: KATRKRMGEQAQ*DISIEDGKFKS Trigger: ACTTTTGAACTTCCCATCTTCTATGCTTATGTCCCACTGTGCCTGCTCCCCCATCCTCTTTCTTGTAGCCTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033418.8 |
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| 3UTR TCA 72 bp | AATAACATAAATCAGCCTTGGTGGAGAAGTTGCCCATaGCTTTTCTGTATGTGTCATTGCCTTGGCCCAAGA | + |
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Preference number: 3 (lower is better) Translates to: NNINQPWWRSCP*LFCMCHCLGPR Trigger: TCTTGGGCCAAGGCAATGACACATACAGAAAAGTCATGGGCAACTTCTCCACCAAGGCTGATTTATGTTATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033418.8 |
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| 3UTR TCA 72 bp | AGCTCCATTTGTCTCCCTCTCAATAAAACACAGAATTaGCAGGACCACTTACAGCATAGAAAACAGCCATCC | + |
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Preference number: 3 (lower is better) Translates to: SSICLPLNKTQN*QDHLQHRKQPS Trigger: GGATGGCTGTTTTCTATGCTGTAAGTGGTCCTGTCAATTCTGTGTTTTATTGAGAGGGAGACAAATGGAGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033418.8 |
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| 3UTR GCA 72 bp | TACCAACCTGTGGAGAGCAGGGTCTCTTATCTTCCCTaGTTAAGAACAAAAGACACAAGTGGCATCATTTTA | + |
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Preference number: 3 (lower is better) Translates to: YQPVESRVSYLP*LRTKDTSGIIL Trigger: TAAAATGATGCCACTTGTGTCTTTTGTTCTTAAGCAGGGAAGATAAGAGACCCTGCTCTCCACAGGTTGGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033418.8 |
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| 3UTR CCA 72 bp | GAAATGAAAGGTGGGCATACATCATTAGAGTCTTCTTaGTTCCAACTCGAATGCTACCTCATTCTGCATCCA | + |
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Preference number: 3 (lower is better) Translates to: EMKGGHTSLESS*FQLECYLILHP Trigger: TGGATGCAGAATGAGGTAGCATTCGAGTTGGAACCAAGAAGACTCTAATGATGTATGCCCACCTTTCATTTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033418.8 |
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| 3UTR CCA 72 bp | GTCTTTGTTCCCATGCTGCAAGACTGTCAGCATAGATaGTTTCCACAGCATTTCAAAACATGCTCTTTACCA | + |
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Preference number: 3 (lower is better) Translates to: VFVPMLQDCQHR*FPQHFKTCSLP Trigger: TGGTAAAGAGCATGTTTTGAAATGCTGTGGAAACCATCTATGCTGACAGTCTTGCAGCATGGGAACAAAGAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033418.8 |
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| 3UTR-3UTR CAA 90 bp | TACCAACCTGTGGAGAGCAGGGTCTCTTATCTTCCCTGCTTAAGAACAAAAGACTTGTATCAGTTTTGTTaGCTAGATGTTCTGTGGGAA | + |
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Preference number: 3 (lower is better) Translates to: YQPVESRVSYLPCLRTKDLYQFC*LDVLWE Trigger: TTCCCACAGAACATCTAGCAAACAAAACTGATACAA...GTCTTTTGTTCTTAAGCAGGGAAGATAAGAGACCCTGCTCTCCACAGGTTGGTA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033418.8 |
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| 3UTR-3UTR CAA 90 bp | CCTGTGGAGAGCAGGGTCTCTTATCTTCCCTGCTTAAGAACAAAAGACACAAGTCTCACTGTTTTAAATTaGCAGAAATGGTTGGAATGG | + |
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Preference number: 3 (lower is better) Translates to: PVESRVSYLPCLRTKDTSLTVLN*QKWLEW Trigger: CCATTCCAACCATTTCTGCAAATTTAAAACAGTGAG...ACTTGTGTCTTTTGTTCTTAAGCAGGGAAGATAAGAGACCCTGCTCTCCACAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033418.8 |
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| 3UTR TCA 72 bp | AGATTCCTTAGGAAGCCATCACAATTCCTGATTAGATaGATTGATGGTCATTGTCCCCTTGTCTTTGTCCTC | + |
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Preference number: 3 (lower is better) Translates to: RFLRKPSQFLIR*IDGHCPLVFVL Trigger: GAGGACAAAGACAAGGGGACAATGACCATCAATTCATCTAATCAGGAATTGTGATGGCTTCCTAAGGAATCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033418.8 |
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| 3UTR GCA 72 bp | AACAAAGGTACTCCTGTTACCTGTCCCCTTTCCCCCTaGTATTGTACTACTGAAAGAGAATTTGAAGCAAAA | + |
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Preference number: 3 (lower is better) Translates to: NKGTPVTCPLSP*YCTTEREFEAK Trigger: TTTTGCTTCAAATTCTCTTTCAGTAGTACAATAGCAGGGGGAAAGGGGACAGGTAACAGGAGTACCTTTGTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033418.8 |
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| 3UTR-3UTR CAA 90 bp | AGTCTTCTTGGTTCCAACTCGAATGCTACCTCATTCTGCATCCATTGTCCTAAAACAATAGGCAGCAGATaGTATCAGTTTTGTTTGCTA | + |
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Preference number: 3 (lower is better) Translates to: SLLGSNSNATSFCIHCPKTIGSR*YQFCLL Trigger: TAGCAAACAAAACTGATACAATCTGCTGCCTATTGT...TTTAGGACAATGGATGCAGAATGAGGTAGCATTCGAGTTGGAACCAAGAAGACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033418.8 |
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| 3UTR CCA 72 bp | CTCTTATCTTCCCTGCTTAAGAACAAAAGACACAAGTaGCATCATTTTATTAACCCGAACTGGTACATGCCT | + |
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Preference number: 3 (lower is better) Translates to: LLSSLLKNKRHK*HHFINPNWYMP Trigger: AGGCATGTACCAGTTCGGGTTAATAAAATGATGCCACTTGTGTCTTTTGTTCTTAAGCAGGGAAGATAAGAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033418.8 |
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| 3UTR-3UTR CAA 90 bp | AAAGGTCATCTGAATGAAAGAAAAGGAATGGTCCTCCTTATGTTGGGTTTACTTCATCTGCTTTTAGGATaGAACAAGAACGAGAAGAAC | + |
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Preference number: 3 (lower is better) Translates to: KGHLNERKGMVLLMLGLLHLLLG*NKNEKN Trigger: GTTCTTCTCGTTCTTGTTCAATCCTAAAAGCAGATG...AAGTAAACCCAACATAAGGAGGACCATTCCTTTTCTTTCATTCAGATGACCTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033418.8 |
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| 3UTR-3UTR CAA 90 bp | GGTACCTCTCACTGTTTTAAATTTGCAGAAATGGTTGGAATGGGGATATATATGATCATTAGAGTCTTCTaGGTTCCAACTCGAATGCTA | + |
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Preference number: 3 (lower is better) Translates to: GTSHCFKFAEMVGMGIYMIIRVF*VPTRML Trigger: TAGCATTCGAGTTGGAACCAAGAAGACTCTAATGAT...CATATATATCCCCATTCCAACCATTTCTGCAAATTTAAAACAGTGAGAGGTACC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033418.8 |
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| 3UTR-3UTR CAA 90 bp | AAAGGTCATCTGAATGAAAGAAAAGGAATGGTCCTCCTTATGTTGGGTTTACTTAAGAGCTCCTTTGGTTaGGATTTTCAATGCAAAAGT | + |
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Preference number: 3 (lower is better) Translates to: KGHLNERKGMVLLMLGLLKSSFG*DFQCKS Trigger: ACTTTTGCATTGAAAATCCAAACCAAAGGAGCTCTT...AAGTAAACCCAACATAAGGAGGACCATTCCTTTTCTTTCATTCAGATGACCTTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000033418.8 |
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| 3UTR-3UTR CAA 90 bp | AAAGGTCATCTGAATGAAAGAAAAGGAATGGTCCTCCTTATGTTGGGTTTACTTAATTTGCAGAAATGGTaGGAATGGGGATATATATGC | + |
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Preference number: 3 (lower is better) Translates to: KGHLNERKGMVLLMLGLLNLQKW*EWGYIC Trigger: GCATATATATCCCCATTCCAACCATTTCTGCAAATT...AAGTAAACCCAACATAAGGAGGACCATTCCTTTTCTTTCATTCAGATGACCTTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033418.8 |
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| 3UTR-3UTR CAA 90 bp | CCTCTCACTGTTTTAAATTTGCAGAAATGGTTGGAATGGGGATATATATGCTTACATCCTAAGGCTTATTaGCAAACAAAGAGAAACAGA | + |
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Preference number: 3 (lower is better) Translates to: PLTVLNLQKWLEWGYICLHPKAY*QTKRNR Trigger: TCTGTTTCTCTTTGTTTGCAAATAAGCCTTAGGATG...TAAGCATATATATCCCCATTCCAACCATTTCTGCAAATTTAAAACAGTGAGAGG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033418.8 |
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| 3UTR TCA 72 bp | AAGGGTTTTGCACAAGCTAGATACATAGTCAAAACTTaGATAGCAGAAATGAAAGGTGGGCATACATCATTA | + |
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Preference number: 3 (lower is better) Translates to: KGFAQARYIVKT*IAEMKGGHTSL Trigger: TAATGATGTATGCCCACCTTTCATTTCTGCTATTCAAGTTTTGACTATGTATCTAGCTTGTGCAAAACCCTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033418.8 |
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| 3UTR TCA 72 bp | TACAAGTTTCCAATAAGCAATGTACTCATATCTTTATaGGTCCCTAAGGCCTGGAGATTACTTTTGTCTGTT | + |
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Preference number: 3 (lower is better) Translates to: YKFPISNVLISL*VPKAWRLLLSV Trigger: AACAGACAAAAGTAATCTCCAGGCCTTAGGGACTCATAAAGATATGAGTACATTGCTTATTGGAAACTTGTA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033418.8 |
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| 3UTR CCA 72 bp | ATACATAGTCAAAACTTGAATAGCAGAAATGAAAGGTaGGCATACATCATTAGAGTCTTCTTGGTTCCAACT | + |
|
Preference number: 3 (lower is better) Translates to: IHSQNLNSRNER*AYIIRVFLVPT Trigger: AGTTGGAACCAAGAAGACTCTAATGATGTATGCCCACCTTTCATTTCTGCTATTCAAGTTTTGACTATGTAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033418.8 |
||
| 3UTR CCA 72 bp | AGGAAGGTACCTCTCACTGTTTTAAATTTGCAGAAATaGTTGGAATGGGGATATATATGCTTATATTGTGAG | + |
|
Preference number: 3 (lower is better) Translates to: RKVPLTVLNLQK*LEWGYICLYCE Trigger: CTCACAATATAAGCATATATATCCCCATTCCAACCATTTCTGCAAATTTAAAACAGTGAGAGGTACCTTCCT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033418.8 |
||
| CDS-3UTR GCA 90 bp | AGAAAGAGGATGGGGGAGCAGGCACAGTGGGACATAAGCATAGAAGATGGGAAGGACTTTTCTCCAGGCTaGTGTACCAATAGTACAGAG | + |
|
Preference number: 4 (lower is better) Translates to: RKRMGEQAQWDISIEDGKDFSPG*CTNSTE Trigger: CTCTGTACTATTGGTACAGCAGCCTGGAGAAAAGTC...CTTCCCATCTTCTATGCTTATGTCCCACTGTGCCTGCTCCCCCATCCTCTTTCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033418.8 |
||
| 3UTR CAA 72 bp | AATGCTCCTCTACTACCACAGAAGCAAGGTTCCCCTTaGTACCAACCTGTGGAGAGCAGGGTCTCTTATCTT | + |
|
Preference number: 4 (lower is better) Translates to: NAPLLPQKQGSP*YQPVESRVSYL Trigger: AAGATAAGAGACCCTGCTCTCCACAGGTTGGTACAAAGGGGAACCTTGCTTCTGTGGTAGTAGAGGAGCATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033418.8 |
||
| CDS-3UTR TCA 90 bp | GAAGAGCTCCTTTGGTTTGGATTTTCAATGCAAAAGTCACATCAAGACCTGTGGTCATTGGCACTACACTaGGAGCCCACCTGCAGACAG | + |
|
Preference number: 4 (lower is better) Translates to: EELLWFGFSMQKSHQDLWSLALH*EPTCRQ Trigger: CTGTCTGCAGGTGGGCTCTCAGTGTAGTGCCAATGA...CCACAGGTCTTGATGTGACTTTTGCATTGAAAATCCAAACCAAAGGAGCTCTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033418.8 |
||
| CDS-3UTR TCA 90 bp | AGAAAGAGGATGGGGGAGCAGGCACAGTGGGACATAAGCATAGAAGATGGGAAGAATTCCTCTTTACGATaGGTTTCTGGAGCAATTTTC | + |
|
Preference number: 4 (lower is better) Translates to: RKRMGEQAQWDISIEDGKNSSLR*VSGAIF Trigger: GAAAATTGCTCCAGAAACTCATCGTAAAGAGGAATT...CTTCCCATCTTCTATGCTTATGTCCCACTGTGCCTGCTCCCCCATCCTCTTTCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033418.8 |
||
| CDS-3UTR CCA 90 bp | TACCAACCTGTGGAGAGCAGGGTCTCTTATCTTCCCTGCTTAAGAACAAAAGACTCAGATTCGGAATTCTaGCATTTGTCCTCTTCAACC | + |
|
Preference number: 4 (lower is better) Translates to: YQPVESRVSYLPCLRTKDSDSEF*HLSSST Trigger: GGTTGAAGAGGACAAATGCCAGAATTCCGAATCTGA...GTCTTTTGTTCTTAAGCAGGGAAGATAAGAGACCCTGCTCTCCACAGGTTGGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033418.8 |
||
| CDS-3UTR TCA 90 bp | CAAACAATAGGCAGCAGATTGTATCAGTTTTGTTTGCTAGATGTTCTGTGGGAATATGCCAAATGCACTTaGGCTCAGTCACAGCGGACT | + |
|
Preference number: 4 (lower is better) Translates to: QTIGSRLYQFCLLDVLWEYAKCT*AQSQRT Trigger: AGTCCGCTGTGACTGAGCTCAAGTGCATTTGGCATA...TTCCCACAGAACATCTAGCAAACAAAACTGATACAATCTGCTGCCTATTGTTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033418.8 |
||
| 3UTR CAA 72 bp | AGAAATGAAAGGTGGGCATACATCATTAGAGTCTTCTaGGTTCCAACTCGAATGCTACCTCATTCTGCATCC | + |
|
Preference number: 4 (lower is better) Translates to: RNERWAYIIRVF*VPTRMLPHSAS Trigger: GGATGCAGAATGAGGTAGCATTCGAGTTGGAACCAAGAAGACTCTAATGATGTATGCCCACCTTTCATTTCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033418.8 |
||
| 3UTR CAA 72 bp | CATTACTCAGTGGGTCCTCAAACAATAGGCAGCAGATaGTATCAGTTTTGTTTGCTAGATGTTCTGTGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: HYSVGPQTIGSR*YQFCLLDVLWE Trigger: TTCCCACAGAACATCTAGCAAACAAAACTGATACAATCTGCTGCCTATTGTTTGAGGACCCACTGAGTAATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033418.8 |
||
| 3UTR CAA 72 bp | GAAGTTGCCCATGACTTTTCTGTATGTGTCATTGCCTaGGCCCAAGATGATTTCTGGAAATTTCAAAGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: EVAHDFSVCVIA*AQDDFWKFQSR Trigger: TCTGCTTTGAAATTTCCAGAAATCATCTTGGGCCAAGGCAATGACACATACAGAAAAGTCATGGGCAACTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033418.8 |
||
| 3UTR CAA 72 bp | GTGGAGAAGTTGCCCATGACTTTTCTGTATGTGTCATaGCCTTGGCCCAAGATGATTTCTGGAAATTTCAAA | + |
|
Preference number: 4 (lower is better) Translates to: VEKLPMTFLYVS*PWPKMISGNFK Trigger: TTTGAAATTTCCAGAAATCATCTTGGGCCAAGGCAATGACACATACAGAAAAGTCATGGGCAACTTCTCCAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033418.8 |
||
| CDS-3UTR GCA 90 bp | CCTCTCACTGTTTTAAATTTGCAGAAATGGTTGGAATGGGGATATATATGCTTACTTCAGGGGGTGAGATaGACTTTTTCACCAAAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: PLTVLNLQKWLEWGYICLLQGVR*TFSPKG Trigger: GCCCTTTGGTGAAAAAGTGCATCTCACCCCCTGAAG...TAAGCATATATATCCCCATTCCAACCATTTCTGCAAATTTAAAACAGTGAGAGG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000033418.8 |
||
| CDS-3UTR CCA 90 bp | CAAACAATAGGCAGCAGATTGTATCAGTTTTGTTTGCTAGATGTTCTGTGGGAACACTATTTTGCAGGATaGCCTAATTTTCCCAGCATT | + |
|
Preference number: 4 (lower is better) Translates to: QTIGSRLYQFCLLDVLWEHYFAG*PNFPSI Trigger: AATGCTGGGAAAATTAGGCCATCCTGCAAAATAGTG...TTCCCACAGAACATCTAGCAAACAAAACTGATACAATCTGCTGCCTATTGTTTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000033418.8 |
||
| CDS-3UTR CCA 90 bp | CTAGTTTGGAGATTTGGCAAAACATCTGCTTTTAGGATTGAACAAGAACGAGAAGCCAGGATCAGGAATTaGAGGAAATATAATGATCTT | + |
|
Preference number: 4 (lower is better) Translates to: LVWRFGKTSAFRIEQEREARIRN*RKYNDL Trigger: AAGATCATTATATTTCCTCCAATTCCTGATCCTGGC...TTCTCGTTCTTGTTCAATCCTAAAAGCAGATGTTTTGCCAAATCTCCAAACTAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033418.8 |
||
| CDS-3UTR TCA 90 bp | CCTCTCACTGTTTTAAATTTGCAGAAATGGTTGGAATGGGGATATATATGCTTATGTTGGTCATCAAAGTaGCTAAAATATCTGAGAGTG | + |
|
Preference number: 4 (lower is better) Translates to: PLTVLNLQKWLEWGYICLCWSSK*LKYLRV Trigger: CACTCTCAGATATTTTAGTCACTTTGATGACCAACA...TAAGCATATATATCCCCATTCCAACCATTTCTGCAAATTTAAAACAGTGAGAGG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000033418.8 |
||
| CDS-3UTR CCA 90 bp | GGTACCTCTCACTGTTTTAAATTTGCAGAAATGGTTGGAATGGGGATATATATGTTTACGATGAGTTTCTaGAGCAATTTTCTTATCCTG | + |
|
Preference number: 4 (lower is better) Translates to: GTSHCFKFAEMVGMGIYMFTMSF*SNFLIL Trigger: CAGGATAAGAAAATTGCTCCAGAAACTCATCGTAAA...CATATATATCCCCATTCCAACCATTTCTGCAAATTTAAAACAGTGAGAGGTACC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000033418.8 |
||
| CDS TCA 90 bp | GTGCAGAGATTTTCGACAGAGACGCTCAAATTCGTCACAGGTGGCTaGACTTCTGTGGCCGCGGCAACTTGGCCCACGGTGGCGGTCCAC | + |
|
Preference number: 5 (lower is better) Translates to: VQRFSTETLKFVTGG*TSVAAATWPTVAVH Trigger: GTGGACCGCCACCGTGGGCCAAGTTGCCGCGGCCACAGAAGTTCAGCCACCTGTGACGAATTTGAGCGTCTCTGTCGAAAATCTCTGCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033418.8 |
||
| CDS CCA 90 bp | TTTCGACAGAGACGCTCAAATTCGTCACAGGTGGCTGAACTTCTGTaGCCGCGGCAACTTGGCCCACGGTGGCGGTCCACAGTAGCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: FRQRRSNSSQVAELL*PRQLGPRWRSTVAA Trigger: TGCTGCTACTGTGGACCGCCACCGTGGGCCAAGTTGCCGCGGCCACAGAAGTTCAGCCACCTGTGACGAATTTGAGCGTCTCTGTCGAAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033418.8 |
||
| CDS TCA 90 bp | GGAGCCAGGAACACTTCATATAGCTCAGGTTATGCCAAATGCACTTaGGCTCAGTCACAGCGGACTCAGGATCACCTTCAGGGGGTGAGA | + |
|
Preference number: 5 (lower is better) Translates to: GARNTSYSSGYAKCT*AQSQRTQDHLQGVR Trigger: TCTCACCCCCTGAAGGTGATCCTGAGTCCGCTGTGACTGAGCTCAAGTGCATTTGGCATAACCTGAGCTATATGAAGTGTTCCTGGCTCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033418.8 |
||
| CDS-3UTR CAA 90 bp | AGAAAGAGGATGGGGGAGCAGGCACAGTGGGACATAAGCATAGAAGATGGGAAGTTATGCCAAATGCACTaGAGCTCAGTCACAGCGGAC | + |
|
Preference number: 5 (lower is better) Translates to: RKRMGEQAQWDISIEDGKLCQMH*SSVTAD Trigger: GTCCGCTGTGACTGAGCTCAAGTGCATTTGGCATAA...CTTCCCATCTTCTATGCTTATGTCCCACTGTGCCTGCTCCCCCATCCTCTTTCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033418.8 |
||
| CDS-3UTR CAA 90 bp | TACCAACCTGTGGAGAGCAGGGTCTCTTATCTTCCCTGCTTAAGAACAAAAGACAGTGTGTGTCAGGGCTaGTATTCCTTCCAGGGAGCC | + |
|
Preference number: 5 (lower is better) Translates to: YQPVESRVSYLPCLRTKDSVCQG*YSFQGA Trigger: GGCTCCCTGGAAGGAATACAAGCCCTGACACACACT...GTCTTTTGTTCTTAAGCAGGGAAGATAAGAGACCCTGCTCTCCACAGGTTGGTA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033418.8 |
||
| CDS GCA 90 bp | AATTTGGACTGGCTCCTTCAGGAGGACTCCACGTCCATATTATCGTaGAGAGATTTTCGACAGAGACGCTCAAATTCGTCACAGGTGGCT | + |
|
Preference number: 5 (lower is better) Translates to: NLDWLLQEDSTSILS*RDFRQRRSNSSQVA Trigger: AGCCACCTGTGACGAATTTGAGCGTCTCTGTCGAAAATCTCTGCACGATAATATGGACGTGGAGTCCTCCTGAAGGAGCCAGTCCAAATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033418.8 |
||
| CDS-3UTR CAA 90 bp | AGAAAGAGGATGGGGGAGCAGGCACAGTGGGACATAAGCATAGAAGATGGGAAGCAATCACTCCACAGTTaGTTGTCATCAAAGCATAAC | + |
|
Preference number: 5 (lower is better) Translates to: RKRMGEQAQWDISIEDGKQSLHS*LSSKHN Trigger: GTTATGCTTTGATGACAACAAACTGTGGAGTGATTG...CTTCCCATCTTCTATGCTTATGTCCCACTGTGCCTGCTCCCCCATCCTCTTTCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033418.8 |
||
| CDS-3UTR CAA 90 bp | CAGGCACAGTGGGACATAAGCATAGAAGATGGGAAGTTCAAAAGTCCAGGAAATAAGAACACCAGGGAGTaGGAAACAACTTGTACCCTC | + |
|
Preference number: 5 (lower is better) Translates to: QAQWDISIEDGKFKSPGNKNTRE*ETTCTL Trigger: GAGGGTACAAGTTGTTTCCAACTCCCTGGTGTTCTT...ATTTCCTGGACTTTTGAACTTCCCATCTTCTATGCTTATGTCCCACTGTGCCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033418.8 |
||
| CDS-3UTR CAA 90 bp | CCTGTGGAGAGCAGGGTCTCTTATCTTCCCTGCTTAAGAACAAAAGACACAAGTTCTGCTTCTAAAATTTaGTGGATTCTTCCACTGCAC | + |
|
Preference number: 5 (lower is better) Translates to: PVESRVSYLPCLRTKDTSSASKI*WILPLH Trigger: GTGCAGTGGAAGAATCCACAAAATTTTAGAAGCAGA...ACTTGTGTCTTTTGTTCTTAAGCAGGGAAGATAAGAGACCCTGCTCTCCACAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033418.8 |
||
| CDS-3UTR CAA 90 bp | CAGGCACAGTGGGACATAAGCATAGAAGATGGGAAGTTCAAAAGTCCAGGAAATTCGGAATTCTGGCATTaGTCCTCTTCAACCTCTAAA | + |
|
Preference number: 5 (lower is better) Translates to: QAQWDISIEDGKFKSPGNSEFWH*SSSTSK Trigger: TTTAGAGGTTGAAGAGGACAAATGCCAGAATTCCGA...ATTTCCTGGACTTTTGAACTTCCCATCTTCTATGCTTATGTCCCACTGTGCCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033418.8 |
||
| CDS-3UTR CAA 90 bp | GAAGAGCTCCTTTGGTTTGGATTTTCAATGCAAAAGTCACATCAAGACCTGTGGTCACTCCACAGTTTGTaGTCATCAAAGCATAACTTG | + |
|
Preference number: 5 (lower is better) Translates to: EELLWFGFSMQKSHQDLWSLHSL*SSKHNL Trigger: CAAGTTATGCTTTGATGACAACAAACTGTGGAGTGA...CCACAGGTCTTGATGTGACTTTTGCATTGAAAATCCAAACCAAAGGAGCTCTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033418.8 |
||
| CDS CCA 90 bp | TGGAAACAACTTGTACCCTCCATGTTTCTATCAGATTCGGAATTCTaGCATTTGTCCTCTTCAACCTCTAAAATATTATGTCGGTCGGTT | + |
|
Preference number: 5 (lower is better) Translates to: WKQLVPSMFLSDSEF*HLSSSTSKILCRSV Trigger: AACCGACCGACATAATATTTTAGAGGTTGAAGAGGACAAATGCCAGAATTCCGAATCTGATAGAAACATGGAGGGTACAAGTTGTTTCCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033418.8 |
||
| CDS-3UTR CAA 90 bp | TTTTGTTTGCTAGATGTTCTGTGGGAATCTAGTACAGCATTAGTGTACACACCCGGAACAAGCAATGTGTaGACCTTCTCTATAGATGTT | + |
|
Preference number: 5 (lower is better) Translates to: FCLLDVLWESSTALVYTPGTSNV*TFSIDV Trigger: AACATCTATAGAGAAGGTCAACACATTGCTTGTTCC...GGGTGTGTACACTAATGCTGTACTAGATTCCCACAGAACATCTAGCAAACAAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033418.8 |
||
| CDS-3UTR CAA 90 bp | TTTTGTTTGCTAGATGTTCTGTGGGAATCTAGTACAGCATTAGTGTACACACCCGTTAAAGACACTATTTaGCAGGATGGCCTAATTTTC | + |
|
Preference number: 5 (lower is better) Translates to: FCLLDVLWESSTALVYTPVKDTI*QDGLIF Trigger: GAAAATTAGGCCATCCTGCAAAATAGTGTCTTTAAC...GGGTGTGTACACTAATGCTGTACTAGATTCCCACAGAACATCTAGCAAACAAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033418.8 |
||
| CDS-3UTR CAA 90 bp | GGTACCTCTCACTGTTTTAAATTTGCAGAAATGGTTGGAATGGGGATATATATGCATAACTTGTTTGTTTaGACTCTTACTCTGACTGTG | + |
|
Preference number: 5 (lower is better) Translates to: GTSHCFKFAEMVGMGIYMHNLFV*TLTLTV Trigger: CACAGTCAGAGTAAGAGTCAAAACAAACAAGTTATG...CATATATATCCCCATTCCAACCATTTCTGCAAATTTAAAACAGTGAGAGGTACC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033418.8 |
||
| CDS CCA 72 bp | GCTGAACTTCTGTGGCCGCGGCAACTTGGCCCACGGTaGCGGTCCACAGTAGCAGCACCAACAGCTCGCCCA | + |
|
Preference number: 6 (lower is better) Translates to: AELLWPRQLGPR*RSTVAAPTARP Trigger: TGGGCGAGCTGTTGGTGCTGCTACTGTGGACCGCCACCGTGGGCCAAGTTGCCGCGGCCACAGAAGTTCAGC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033418.8 |
||
| CDS CCA 72 bp | AGACGCTCAAATTCGTCACAGGTGGCTGAACTTCTGTaGCCGCGGCAACTTGGCCCACGGTGGCGGTCCACA | + |
|
Preference number: 6 (lower is better) Translates to: RRSNSSQVAELL*PRQLGPRWRST Trigger: TGTGGACCGCCACCGTGGGCCAAGTTGCCGCGGCCACAGAAGTTCAGCCACCTGTGACGAATTTGAGCGTCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033418.8 |
||
| CDS TCA 72 bp | TTTTCGACAGAGACGCTCAAATTCGTCACAGGTGGCTaGACTTCTGTGGCCGCGGCAACTTGGCCCACGGTG | + |
|
Preference number: 6 (lower is better) Translates to: FSTETLKFVTGG*TSVAAATWPTV Trigger: CACCGTGGGCCAAGTTGCCGCGGCCACAGAAGTTCAGCCACCTGTGACGAATTTGAGCGTCTCTGTCGAAAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033418.8 |
||
| CDS TCA 72 bp | AAAGGGCTAGGCTTCTCACTTTCATTGGCACTACACTaGGAGCCCACCTGCAGACAGATTTTCTCATCCAGG | + |
|
Preference number: 6 (lower is better) Translates to: KGLGFSLSLALH*EPTCRQIFSSR Trigger: CCTGGATGAGAAAATCTGTCTGCAGGTGGGCTCTCAGTGTAGTGCCAATGAAAGTGAGAAGCCTAGCCCTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033418.8 |
||
| CDS CAA 90 bp | CCAGGCTGCTGTACCAATAGTACAGAGTATAGTGTGTGTCAGGGCTaGTATTCCTTCCAGGGAGCCAGGAACACTTCATATAGCTCAGGT | + |
|
Preference number: 6 (lower is better) Translates to: PGCCTNSTEYSVCQG*YSFQGARNTSYSSG Trigger: ACCTGAGCTATATGAAGTGTTCCTGGCTCCCTGGAAGGAATACAAGCCCTGACACACACTATACTCTGTACTATTGGTACAGCAGCCTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033418.8 |
||
| CDS CAA 72 bp | GACTGTGTAGACAGCGTCGGCAAGAACACCAGGGAGTaGGAAACAACTTGTACCCTCCATGTTTCTATCAGA | + |
|
Preference number: 6 (lower is better) Translates to: DCVDSVGKNTRE*ETTCTLHVSIR Trigger: TCTGATAGAAACATGGAGGGTACAAGTTGTTTCCAACTCCCTGGTGTTCTTGCCGACGCTGTCTACACAGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033418.8 |
||
| CDS CAA 90 bp | CTGTGTAGACAGCGTCGGCAAGAACACCAGGGAGTTGGAAACAACTaGTACCCTCCATGTTTCTATCAGATTCGGAATTCTGGCATTTGT | + |
|
Preference number: 6 (lower is better) Translates to: LCRQRRQEHQGVGNN*YPPCFYQIRNSGIC Trigger: ACAAATGCCAGAATTCCGAATCTGATAGAAACATGGAGGGTACAAGTTGTTTCCAACTCCCTGGTGTTCTTGCCGACGCTGTCTACACAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033418.8 |
||
| CDS TCA 72 bp | AACACTTCATATAGCTCAGGTTATGCCAAATGCACTTaGGCTCAGTCACAGCGGACTCAGGATCACCTTCAG | + |
|
Preference number: 6 (lower is better) Translates to: NTSYSSGYAKCT*AQSQRTQDHLQ Trigger: CTGAAGGTGATCCTGAGTCCGCTGTGACTGAGCTCAAGTGCATTTGGCATAACCTGAGCTATATGAAGTGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033418.8 |
||
| CDS CAA 72 bp | TGTACCAATAGTACAGAGTATAGTGTGTGTCAGGGCTaGTATTCCTTCCAGGGAGCCAGGAACACTTCATAT | + |
|
Preference number: 6 (lower is better) Translates to: CTNSTEYSVCQG*YSFQGARNTSY Trigger: ATATGAAGTGTTCCTGGCTCCCTGGAAGGAATACAAGCCCTGACACACACTATACTCTGTACTATTGGTACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033418.8 |
||
| CDS CAA 90 bp | TGCTCCTTACCTATACTCTGTGCTTCACTCCAATCACTCCACAGTTaGTTGTCATCAAAGCATAACTTGTTTGTTTTGACTCTTACTCTG | + |
|
Preference number: 6 (lower is better) Translates to: CSLPILCASLQSLHS*LSSKHNLFVLTLTL Trigger: CAGAGTAAGAGTCAAAACAAACAAGTTATGCTTTGATGACAACAAACTGTGGAGTGATTGGAGTGAAGCACAGAGTATAGGTAAGGAGCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033418.8 |
||
| CDS CAA 72 bp | AGCAATGTGTTGACCTTCTCTATAGATGTTTTCACATaGACGACTTTTCTCCAGGCTGCTGTACCAATAGTA | + |
|
Preference number: 6 (lower is better) Translates to: SNVLTFSIDVFT*TTFLQAAVPIV Trigger: TACTATTGGTACAGCAGCCTGGAGAAAAGTCGTCAATGTGAAAACATCTATAGAGAAGGTCAACACATTGCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033418.8 |
||
| CDS CAA 90 bp | AAAGGAACAAGCAATGTGTTGACCTTCTCTATAGATGTTTTCACATaGACGACTTTTCTCCAGGCTGCTGTACCAATAGTACAGAGTATA | + |
|
Preference number: 6 (lower is better) Translates to: KGTSNVLTFSIDVFT*TTFLQAAVPIVQSI Trigger: TATACTCTGTACTATTGGTACAGCAGCCTGGAGAAAAGTCGTCAATGTGAAAACATCTATAGAGAAGGTCAACACATTGCTTGTTCCTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033418.8 |
||
| CDS CAA 90 bp | TCCTTACCTATACTCTGTGCTTCACTCCAATCACTCCACAGTTTGTaGTCATCAAAGCATAACTTGTTTGTTTTGACTCTTACTCTGACT | + |
|
Preference number: 6 (lower is better) Translates to: SLPILCASLQSLHSL*SSKHNLFVLTLTLT Trigger: AGTCAGAGTAAGAGTCAAAACAAACAAGTTATGCTTTGATGACAACAAACTGTGGAGTGATTGGAGTGAAGCACAGAGTATAGGTAAGGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033418.8 |
||
| CDS TCA 72 bp | TCTGGAGCAATTTTCTTATCCTGTTGGTCATCAAAGTaGCTAAAATATCTGAGAGTGCAATTTGGACTGGCT | + |
|
Preference number: 6 (lower is better) Translates to: SGAIFLSCWSSK*LKYLRVQFGLA Trigger: AGCCAGTCCAAATTGCACTCTCAGATATTTTAGTCACTTTGATGACCAACAGGATAAGAAAATTGCTCCAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033418.8 |
||
| CDS CAA 72 bp | CCTATACTCTGTGCTTCACTCCAATCACTCCACAGTTaGTTGTCATCAAAGCATAACTTGTTTGTTTTGACT | + |
|
Preference number: 6 (lower is better) Translates to: PILCASLQSLHS*LSSKHNLFVLT Trigger: AGTCAAAACAAACAAGTTATGCTTTGATGACAACAAACTGTGGAGTGATTGGAGTGAAGCACAGAGTATAGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033418.8 |
||
| CDS CCA 72 bp | CTTGTACCCTCCATGTTTCTATCAGATTCGGAATTCTaGCATTTGTCCTCTTCAACCTCTAAAATATTATGT | + |
|
Preference number: 6 (lower is better) Translates to: LVPSMFLSDSEF*HLSSSTSKILC Trigger: ACATAATATTTTAGAGGTTGAAGAGGACAAATGCCAGAATTCCGAATCTGATAGAAACATGGAGGGTACAAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033418.8 |
||
| CDS CAA 72 bp | TGGCCTAATTTTCCCAGCATTATCCTTGACCATTATTaGAACGTTCTGATGTTCAAAACTAGGTTCCACTTT | + |
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Preference number: 6 (lower is better) Translates to: WPNFPSIILDHY*NVLMFKTRFHF Trigger: AAAGTGGAACCTAGTTTTGAACATCAGAACGTTCAAATAATGGTCAAGGATAATGCTGGGAAAATTAGGCCA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033418.8 |
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| CDS CAA 72 bp | ATACTCTGTGCTTCACTCCAATCACTCCACAGTTTGTaGTCATCAAAGCATAACTTGTTTGTTTTGACTCTT | + |
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Preference number: 6 (lower is better) Translates to: ILCASLQSLHSL*SSKHNLFVLTL Trigger: AAGAGTCAAAACAAACAAGTTATGCTTTGATGACAACAAACTGTGGAGTGATTGGAGTGAAGCACAGAGTAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033418.8 |
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| CDS CAA 90 bp | TTTGCAGGATGGCCTAATTTTCCCAGCATTATCCTTGACCATTATTaGAACGTTCTGATGTTCAAAACTAGGTTCCACTTTAGTCAATTT | + |
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Preference number: 6 (lower is better) Translates to: FAGWPNFPSIILDHY*NVLMFKTRFHFSQF Trigger: AAATTGACTAAAGTGGAACCTAGTTTTGAACATCAGAACGTTCAAATAATGGTCAAGGATAATGCTGGGAAAATTAGGCCATCCTGCAAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033418.8 |
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| CDS CAA 72 bp | TTCCACTTTAGTCAATTTAAAGGAACAAGCAATGTGTaGACCTTCTCTATAGATGTTTTCACATTGACGACT | + |
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Preference number: 6 (lower is better) Translates to: FHFSQFKGTSNV*TFSIDVFTLTT Trigger: AGTCGTCAATGTGAAAACATCTATAGAGAAGGTCAACACATTGCTTGTTCCTTTAAATTGACTAAAGTGGAA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033418.8 |
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