RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for IL13 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000020383

Ensembl transcript IDs: ENSMUST00000020650.2

Found 35 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp AAGAAGAAATGTGCTCAAGCTGCTGCCTGCCTCAGTTGCCCTGTGTaGACCAGGCCACAGGCTGGACTCACGGTCTTGCTGCAGTTTTCT +
Preference number: 1 (lower is better)
Translates to: KKKCAQAAACLSCPV*TRPQAGLTVLLQFS
Trigger: AGAAAACTGCAGCAAGACCGTGAGTCCAGCCTGTGGCCTGGTCCACACAGGGCAACTGAGGCAGGCAGCAGCTTGAGCACATTTCTTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000020650.2
3UTR GCA 90 bp AATAAGATCAAGAAGAAATGTGCTCAAGCTGCTGCCTGCCTCAGTTaGCCTGTGTGGACCAGGCCACAGGCTGGACTCACGGTCTTGCTG +
Preference number: 1 (lower is better)
Translates to: NKIKKKCAQAAACLS*PVWTRPQAGLTVLL
Trigger: CAGCAAGACCGTGAGTCCAGCCTGTGGCCTGGTCCACACAGGGCAACTGAGGCAGGCAGCAGCTTGAGCACATTTCTTCTTGATCTTATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000020650.2
3UTR CCA 90 bp AACAAAACAATAAGTTATTTCATGGCTGAGGGCTGGTTGCTGCCGTaGCAGACAGGAGTGTTGCTCTGGCCTCCCCTCCCATCTCCTGCC +
Preference number: 1 (lower is better)
Translates to: NKTISYFMAEGWLLP*QTGVLLWPPLPSPA
Trigger: GGCAGGAGATGGGAGGGGAGGCCAGAGCAACACTCCTGTCTGCCACGGCAGCAACCAGCCCTCAGCCATGAAATAACTTATTGTTTTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000020650.2
3UTR-3UTR TCA 90 bp GCTGGACTCACGGTCTTGCTGCAGTTTTCTGTAGGGATGGGATGGGGCGGCGGGGCCAGGCTGAGACCCTaGGCACTAGGCAGGCAGTGC +
Preference number: 2 (lower is better)
Translates to: AGLTVLLQFSVGMGWGGGARLRP*ALGRQC
Trigger: GCACTGCCTGCCTAGTGCTCAGGGTCTCAGCCTGGC...CCCGCCGCCCCATCCCATCCCTACAGAAAACTGCAGCAAGACCGTGAGTCCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000020650.2
3UTR-3UTR GCA 90 bp TTGCCAGGGACCCCAGAGCCCACTGCTTCAATGCTGGAGCCCCCAGGGCATAGGGCACTAGGCAGGCAGTaGAGGCTGAGGCCAAAGCTG +
Preference number: 2 (lower is better)
Translates to: LPGTPEPTASMLEPPGHRALGRQ*RLRPKL
Trigger: CAGCTTTGGCCTCAGCCTGCACTGCCTGCCTAGTGC...CCTATGCCCTGGGGGCTCCAGCATTGAAGCAGTGGGCTCTGGGGTCCCTGGCAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000020650.2
3UTR-3UTR GCA 90 bp CTGGTTGCTGCCGTGGCAGACAGGAGTGTTGCTCTGGCCTCCCCTCCCATCTCCGCTCAAGCTGCTGCCTaGCTCAGTTGCCCTGTGTGG +
Preference number: 2 (lower is better)
Translates to: LVAAVADRSVALASPPISAQAAA*LSCPVW
Trigger: CCACACAGGGCAACTGAGGCAGGCAGCAGCTTGAGC...GGAGATGGGAGGGGAGGCCAGAGCAACACTCCTGTCTGCCACGGCAGCAACCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000020650.2
3UTR-3UTR GCA 90 bp CTGGTTGCTGCCGTGGCAGACAGGAGTGTTGCTCTGGCCTCCCCTCCCATCTCCATGTGCTCAAGCTGCTaGCTGCCTCAGTTGCCCTGT +
Preference number: 2 (lower is better)
Translates to: LVAAVADRSVALASPPISMCSSC*LPQLPC
Trigger: ACAGGGCAACTGAGGCAGGCAGCAGCTTGAGCACAT...GGAGATGGGAGGGGAGGCCAGAGCAACACTCCTGTCTGCCACGGCAGCAACCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000020650.2
3UTR-3UTR GCA 90 bp AGGCAGGCAGTGCAGGCTGAGGCCAAAGCTGAGGCATCTCCCTTCCTCCTCAACAGTCCACAGCTGAGATaGCCAGGGATGGTCTCTCCT +
Preference number: 2 (lower is better)
Translates to: RQAVQAEAKAEASPFLLNSPQLR*PGMVSP
Trigger: AGGAGAGACCATCCCTGGGCATCTCAGCTGTGGACT...GTTGAGGAGGAAGGGAGATGCCTCAGCTTTGGCCTCAGCCTGCACTGCCTGCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000020650.2
3UTR-3UTR GCA 90 bp AGTAATATTGCCAGGGACCCCAGAGCCCACTGCTTCAATGCTGGAGCCCCCAGGGAAATGTGCTCAAGCTaGTGCCTGCCTCAGTTGCCC +
Preference number: 2 (lower is better)
Translates to: SNIARDPRAHCFNAGAPREMCSS*CLPQLP
Trigger: GGGCAACTGAGGCAGGCAGCAGCTTGAGCACATTTC...CCTGGGGGCTCCAGCATTGAAGCAGTGGGCTCTGGGGTCCCTGGCAATATTACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000020650.2
3UTR-3UTR TCA 90 bp GAGACCCTGAGCACTAGGCAGGCAGTGCAGGCTGAGGCCAAAGCTGAGGCATCTCAGCAAAGTCTGATGTaGGAAAGGAAAATGAGTCCA +
Preference number: 2 (lower is better)
Translates to: ETLSTRQAVQAEAKAEASQQSLM*ERKMSP
Trigger: TGGACTCATTTTCCTTTCTCACATCAGACTTTGCTG...AGATGCCTCAGCTTTGGCCTCAGCCTGCACTGCCTGCCTAGTGCTCAGGGTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000020650.2
3UTR CCA 72 bp CTGCCTCAGTTGCCCTGTGTGGACCAGGCCACAGGCTaGACTCACGGTCTTGCTGCAGTTTTCTGTAGGGAT +
Preference number: 3 (lower is better)
Translates to: LPQLPCVDQATG*THGLAAVFCRD
Trigger: ATCCCTACAGAAAACTGCAGCAAGACCGTGAGTCCAGCCTGTGGCCTGGTCCACACAGGGCAACTGAGGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000020650.2
3UTR CCA 72 bp ATAAGTTATTTCATGGCTGAGGGCTGGTTGCTGCCGTaGCAGACAGGAGTGTTGCTCTGGCCTCCCCTCCCA +
Preference number: 3 (lower is better)
Translates to: ISYFMAEGWLLP*QTGVLLWPPLP
Trigger: TGGGAGGGGAGGCCAGAGCAACACTCCTGTCTGCCACGGCAGCAACCAGCCCTCAGCCATGAAATAACTTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000020650.2
3UTR GCA 72 bp AATAAGATCAAGAAGAAATGTGCTCAAGCTGCTGCCTaGCTCAGTTGCCCTGTGTGGACCAGGCCACAGGCT +
Preference number: 3 (lower is better)
Translates to: NKIKKKCAQAAA*LSCPVWTRPQA
Trigger: AGCCTGTGGCCTGGTCCACACAGGGCAACTGAGGCAGGCAGCAGCTTGAGCACATTTCTTCTTGATCTTATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000020650.2
3UTR TCA 72 bp CCATCTCCTGCCTGGGGTGAGACCTGGAGGCTACAGTaGGGTAGCAGAGTTATGTATACAGTAATATTGCCA +
Preference number: 3 (lower is better)
Translates to: PSPAWGETWRLQ*GSRVMYTVILP
Trigger: TGGCAATATTACTGTATACATAACTCTGCTACCTCACTGTAGCCTCCAGGTCTCACCCCAGGCAGGAGATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000020650.2
3UTR CCA 72 bp AAGAACAAAACAATAAGTTATTTCATGGCTGAGGGCTaGTTGCTGCCGTGGCAGACAGGAGTGTTGCTCTGG +
Preference number: 3 (lower is better)
Translates to: KNKTISYFMAEG*LLPWQTGVLLW
Trigger: CCAGAGCAACACTCCTGTCTGCCACGGCAGCAACCAGCCCTCAGCCATGAAATAACTTATTGTTTTGTTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000020650.2
3UTR CAA 72 bp GCTGAGGGCTGGTTGCTGCCGTGGCAGACAGGAGTGTaGCTCTGGCCTCCCCTCCCATCTCCTGCCTGGGGT +
Preference number: 4 (lower is better)
Translates to: AEGWLLPWQTGV*LWPPLPSPAWG
Trigger: ACCCCAGGCAGGAGATGGGAGGGGAGGCCAGAGCAACACTCCTGTCTGCCACGGCAGCAACCAGCCCTCAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000020650.2
3UTR CAA 72 bp CCTGTGTGGACCAGGCCACAGGCTGGACTCACGGTCTaGCTGCAGTTTTCTGTAGGGATGGGATGGGGCGGC +
Preference number: 4 (lower is better)
Translates to: PVWTRPQAGLTV*LQFSVGMGWGG
Trigger: GCCGCCCCATCCCATCCCTACAGAAAACTGCAGCAAGACCGTGAGTCCAGCCTGTGGCCTGGTCCACACAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000020650.2
CDS-3UTR GCA 90 bp GCTGGACTCACGGTCTTGCTGCAGTTTTCTGTAGGGATGGGATGGGGCGGCGGGCACTCCATACCATGCTaGCGTTGCACAGGGGAGTCT +
Preference number: 4 (lower is better)
Translates to: AGLTVLLQFSVGMGWGGGHSIPC*RCTGES
Trigger: AGACTCCCCTGTGCAACGGCAGCATGGTATGGAGTG...CCCGCCGCCCCATCCCATCCCTACAGAAAACTGCAGCAAGACCGTGAGTCCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000020650.2
CDS-3UTR GCA 90 bp CTGGTTGCTGCCGTGGCAGACAGGAGTGTTGCTCTGGCCTCCCCTCCCATCTCCCGGTTACAGAGGCCATaGAATATCCTCTGGGTCCTG +
Preference number: 4 (lower is better)
Translates to: LVAAVADRSVALASPPISRLQRP*NILWVL
Trigger: CAGGACCCAGAGGATATTGCATGGCCTCTGTAACCG...GGAGATGGGAGGGGAGGCCAGAGCAACACTCCTGTCTGCCACGGCAGCAACCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000020650.2
CDS-3UTR CCA 90 bp GGGACCCCAGAGCCCACTGCTTCAATGCTGGAGCCCCCAGGGCATAGGCAGCAATGCAATTGGAGATGTTaGTCAGGGAATCCAGGGCTA +
Preference number: 4 (lower is better)
Translates to: GTPEPTASMLEPPGHRQQCNWRC*SGNPGL
Trigger: TAGCCCTGGATTCCCTGACCAACATCTCCAATTGCA...TTGCTGCCTATGCCCTGGGGGCTCCAGCATTGAAGCAGTGGGCTCTGGGGTCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000020650.2
CDS-3UTR TCA 90 bp AGTAATATTGCCAGGGACCCCAGAGCCCACTGCTTCAATGCTGGAGCCCCCAGGGAGTCTGGTCTTGTGTaGTGTTGCTCAGCTCCTCAA +
Preference number: 4 (lower is better)
Translates to: SNIARDPRAHCFNAGAPRESGLV*CCSAPQ
Trigger: TTGAGGAGCTGAGCAACATCACACAAGACCAGACTC...CCTGGGGGCTCCAGCATTGAAGCAGTGGGCTCTGGGGTCCCTGGCAATATTACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000020650.2
CDS-3UTR GCA 90 bp CTCTCCCCAGCAAAGTCTGATGTGAGAAAGGAAAATGAGTCCACAGCTGAGATGAGCAAGAGCCAGGACTaGAGTCACCCAGAGCGCCAT +
Preference number: 4 (lower is better)
Translates to: LSPAKSDVRKENESTAEMSKSQD*SHPERH
Trigger: ATGGCGCTCTGGGTGACTGCAGTCCTGGCTCTTGCT...CATCTCAGCTGTGGACTCATTTTCCTTTCTCACATCAGACTTTGCTGGGGAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000020650.2
CDS-3UTR GCA 90 bp ACAGGCTGGACTCACGGTCTTGCTGCAGTTTTCTGTAGGGATGGGATGGGGCGGTCCTGTAGATGGCATTaGAATTGGAGATGTTGGTCA +
Preference number: 4 (lower is better)
Translates to: TGWTHGLAAVFCRDGMGRSCRWH*NWRCWS
Trigger: TGACCAACATCTCCAATTGCAATGCCATCTACAGGA...CCGCCCCATCCCATCCCTACAGAAAACTGCAGCAAGACCGTGAGTCCAGCCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000020650.2
3UTR CAA 72 bp AACAAAACAATAAGTTATTTCATGGCTGAGGGCTGGTaGCTGCCGTGGCAGACAGGAGTGTTGCTCTGGCCT +
Preference number: 4 (lower is better)
Translates to: NKTISYFMAEGW*LPWQTGVLLWP
Trigger: AGGCCAGAGCAACACTCCTGTCTGCCACGGCAGCAACCAGCCCTCAGCCATGAAATAACTTATTGTTTTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000020650.2
CDS-3UTR CAA 90 bp ACCCTGAGCACTAGGCAGGCAGTGCAGGCTGAGGCCAAAGCTGAGGCATCTCCCGCCGTGGCGAAACAGTaGCTTTGTGTAGCTGAGCAG +
Preference number: 5 (lower is better)
Translates to: TLSTRQAVQAEAKAEASPAVAKQ*LCVAEQ
Trigger: CTGCTCAGCTACACAAAGCAACTGTTTCGCCACGGC...GGGAGATGCCTCAGCTTTGGCCTCAGCCTGCACTGCCTGCCTAGTGCTCAGGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000020650.2
CDS-3UTR CAA 90 bp AGTAATATTGCCAGGGACCCCAGAGCCCACTGCTTCAATGCTGGAGCCCCCAGGCATACCATGCTGCCGTaGCACAGGGGAGTCTGGTCT +
Preference number: 5 (lower is better)
Translates to: SNIARDPRAHCFNAGAPRHTMLP*HRGVWS
Trigger: AGACCAGACTCCCCTGTGCAACGGCAGCATGGTATG...CCTGGGGGCTCCAGCATTGAAGCAGTGGGCTCTGGGGTCCCTGGCAATATTACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000020650.2
CDS CCA 90 bp GCAATATCCTCTGGGTCCTGTAGATGGCATTGCAATTGGAGATGTTaGTCAGGGAATCCAGGGCTACACAGAACCCGCCAGCGGCCAGGT +
Preference number: 5 (lower is better)
Translates to: AISSGSCRWHCNWRC*SGNPGLHRTRQRPG
Trigger: ACCTGGCCGCTGGCGGGTTCTGTGTAGCCCTGGATTCCCTGACCAACATCTCCAATTGCAATGCCATCTACAGGACCCAGAGGATATTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000020650.2
CDS-3UTR CAA 90 bp AGTAATATTGCCAGGGACCCCAGAGCCCACTGCTTCAATGCTGGAGCCCCCAGGTGGTCTTGTGTGATGTaGCTCAGCTCCTCAATAAGC +
Preference number: 5 (lower is better)
Translates to: SNIARDPRAHCFNAGAPRWSCVM*LSSSIS
Trigger: GCTTATTGAGGAGCTGAGCAACATCACACAAGACCA...CCTGGGGGCTCCAGCATTGAAGCAGTGGGCTCTGGGGTCCCTGGCAATATTACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000020650.2
CDS CCA 90 bp AGAGGCCATGCAATATCCTCTGGGTCCTGTAGATGGCATTGCAATTaGAGATGTTGGTCAGGGAATCCAGGGCTACACAGAACCCGCCAG +
Preference number: 5 (lower is better)
Translates to: RGHAISSGSCRWHCN*RCWSGNPGLHRTRQ
Trigger: CTGGCGGGTTCTGTGTAGCCCTGGATTCCCTGACCAACATCTCCAATTGCAATGCCATCTACAGGACCCAGAGGATATTGCATGGCCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000020650.2
CDS CCA 90 bp CCTTGCGGTTACAGAGGCCATGCAATATCCTCTGGGTCCTGTAGATaGCATTGCAATTGGAGATGTTGGTCAGGGAATCCAGGGCTACAC +
Preference number: 5 (lower is better)
Translates to: PCGYRGHAISSGSCR*HCNWRCWSGNPGLH
Trigger: GTGTAGCCCTGGATTCCCTGACCAACATCTCCAATTGCAATGCCATCTACAGGACCCAGAGGATATTGCATGGCCTCTGTAACCGCAAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000020650.2
CDS GCA 90 bp GGTTACAGAGGCCATGCAATATCCTCTGGGTCCTGTAGATGGCATTaGAATTGGAGATGTTGGTCAGGGAATCCAGGGCTACACAGAACC +
Preference number: 5 (lower is better)
Translates to: GYRGHAISSGSCRWH*NWRCWSGNPGLHRT
Trigger: GGTTCTGTGTAGCCCTGGATTCCCTGACCAACATCTCCAATTGCAATGCCATCTACAGGACCCAGAGGATATTGCATGGCCTCTGTAACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000020650.2
CDS CAA 90 bp CAGAACCCGCCAGCGGCCAGGTCCACACTCCATACCATGCTGCCGTaGCACAGGGGAGTCTGGTCTTGTGTGATGTTGCTCAGCTCCTCA +
Preference number: 6 (lower is better)
Translates to: QNPPAARSTLHTMLP*HRGVWSCVMLLSSS
Trigger: TGAGGAGCTGAGCAACATCACACAAGACCAGACTCCCCTGTGCAACGGCAGCATGGTATGGAGTGTGGACCTGGCCGCTGGCGGGTTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000020650.2
CDS CAA 72 bp CCAGCGGCCAGGTCCACACTCCATACCATGCTGCCGTaGCACAGGGGAGTCTGGTCTTGTGTGATGTTGCTC +
Preference number: 6 (lower is better)
Translates to: PAARSTLHTMLP*HRGVWSCVMLL
Trigger: GAGCAACATCACACAAGACCAGACTCCCCTGTGCAACGGCAGCATGGTATGGAGTGTGGACCTGGCCGCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000020650.2
CDS CAA 72 bp CTGCCGTTGCACAGGGGAGTCTGGTCTTGTGTGATGTaGCTCAGCTCCTCAATAAGCTCCTTAAGGGTCAGA +
Preference number: 6 (lower is better)
Translates to: LPLHRGVWSCVM*LSSSISSLRVR
Trigger: TCTGACCCTTAAGGAGCTTATTGAGGAGCTGAGCAACATCACACAAGACCAGACTCCCCTGTGCAACGGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000020650.2
CDS CCA 72 bp GCAATATCCTCTGGGTCCTGTAGATGGCATTGCAATTaGAGATGTTGGTCAGGGAATCCAGGGCTACACAGA +
Preference number: 6 (lower is better)
Translates to: AISSGSCRWHCN*RCWSGNPGLHR
Trigger: TCTGTGTAGCCCTGGATTCCCTGACCAACATCTCCAATTGCAATGCCATCTACAGGACCCAGAGGATATTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000020650.2