Pregenerated sensors for IL12RB2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000018341Ensembl transcript IDs: ENSMUST00000018485.4, ENSMUST00000117441.8
Found 203 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CCA 90 bp | AGAGAAAATCCATCAAGAGTACATCAATTCATGACATTGCTGGTGAATTGGCCCAACATCAGCAAGGTATaGGTTCTTGTAGACCAGAGA | + |
|
Preference number: 2 (lower is better) Translates to: RENPSRVHQFMTLLVNWPNISKV*VLVDQR Trigger: TCTCTGGTCTACAAGAACCCATACCTTGCTGATGTT...GGGCCAATTCACCAGCAATGTCATGAATTGATGTACTCTTGATGGATTTTCTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117441.8 |
||
| 3UTR CCA 72 bp | GTACCTATGGTGAAGCTAATTTTATCCAGAGACAGCTaGCTTGTCTTCACTGTCACAGACCTTTGGAGTAGG | + |
|
Preference number: 3 (lower is better) Translates to: VPMVKLILSRDS*LVFTVTDLWSR Trigger: CCTACTCCAAAGGTCTGTGACAGTGAAGACAAGCCAGCTGTCTCTGGATAAAATTAGCTTCACCATAGGTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018485.4 ENSMUST00000117441.8 |
||
| 3UTR CCA 72 bp | CTTGTCTTCACTGTCACAGACCTTTGGAGTAGGAACTaGGCAGATAAAATGAGGTACGTTGGCTTTCTAGTA | + |
|
Preference number: 3 (lower is better) Translates to: LVFTVTDLWSRN*ADKMRYVGFLV Trigger: TACTAGAAAGCCAACGTACCTCATTTTATCTGCCCAGTTCCTACTCCAAAGGTCTGTGACAGTGAAGACAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018485.4 ENSMUST00000117441.8 |
||
| 3UTR TCA 72 bp | AGCACAGAGGCAATTTTCCATCAAACCGATAGAGATTaGCAGATGTTGAAACTGTGTGTGTGTGTGTGTGTG | + |
|
Preference number: 3 (lower is better) Translates to: STEAIFHQTDRD*QMLKLCVCVCV Trigger: CACACACACACACACACACAGTTTCAACATCTGTCAATCTCTATCGGTTTGATGGAAAATTGCCTCTGTGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117441.8 |
||
| CDS-3UTR TCA 90 bp | TGGCTTGTCTTCACTGTCACAGACCTTTGGAGTAGGAACTGGGCAGATAAAATGCCCCAGTTCGGGGGATaGCCCTGGTCCAGGAGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: WLVFTVTDLWSRNWADKMPQFGG*PWSRRC Trigger: ACACCTCCTGGACCAGGGTCATCCCCCGAACTGGGG...CATTTTATCTGCCCAGTTCCTACTCCAAAGGTCTGTGACAGTGAAGACAAGCCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000018485.4 ENSMUST00000117441.8 |
||
| CDS-3UTR TCA 90 bp | ACAGACCTTTGGAGTAGGAACTGGGCAGATAAAATGAGGTACGTTGGCTTTCTACCCCAGTTCGGGGGATaGCCCTGGTCCAGGAGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: TDLWSRNWADKMRYVGFLPQFGG*PWSRRC Trigger: ACACCTCCTGGACCAGGGTCATCCCCCGAACTGGGG...TAGAAAGCCAACGTACCTCATTTTATCTGCCCAGTTCCTACTCCAAAGGTCTGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000018485.4 ENSMUST00000117441.8 |
||
| CDS-3UTR CCA 90 bp | GCTGGCTTGTCTTCACTGTCACAGACCTTTGGAGTAGGAACTGGGCAGATAAAAATCACAGGGGCAGGCTaGACGGTCACAGTGCCAAGC | + |
|
Preference number: 4 (lower is better) Translates to: AGLSSLSQTFGVGTGQIKITGAG*TVTVPS Trigger: GCTTGGCACTGTGACCGTCCAGCCTGCCCCTGTGAT...TTTTATCTGCCCAGTTCCTACTCCAAAGGTCTGTGACAGTGAAGACAAGCCAGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000018485.4 |
||
| CDS-3UTR GCA 90 bp | ACAGACCTTTGGAGTAGGAACTGGGCAGATAAAATGAGGTACGTTGGCTTTCTACACCCCGGATGGAGCTaGACCCTCCTTGGCTCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: TDLWSRNWADKMRYVGFLHPGWS*TLLGSL Trigger: CAGAGAGCCAAGGAGGGTGCAGCTCCATCCGGGGTG...TAGAAAGCCAACGTACCTCATTTTATCTGCCCAGTTCCTACTCCAAAGGTCTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018485.4 ENSMUST00000117441.8 |
||
| CDS-3UTR TCA 90 bp | TGGCTTGTCTTCACTGTCACAGACCTTTGGAGTAGGAACTGGGCAGATAAAATGTTTGCAGAGACCTGGTaGGGAGCCAGCAACCCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: WLVFTVTDLWSRNWADKMFAETW*GASNPV Trigger: CACTGGGTTGCTGGCTCCTCACCAGGTCTCTGCAAA...CATTTTATCTGCCCAGTTCCTACTCCAAAGGTCTGTGACAGTGAAGACAAGCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018485.4 ENSMUST00000117441.8 |
||
| CDS-3UTR TCA 90 bp | GCTGGCTTGTCTTCACTGTCACAGACCTTTGGAGTAGGAACTGGGCAGATAAAAGTGATGGCAGTAATGTaGGGGCCACTCACTGGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: AGLSSLSQTFGVGTGQIKVMAVM*GPLTGA Trigger: AGCACCAGTGAGTGGCCCTCACATTACTGCCATCAC...TTTTATCTGCCCAGTTCCTACTCCAAAGGTCTGTGACAGTGAAGACAAGCCAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018485.4 ENSMUST00000117441.8 |
||
| CDS-3UTR GCA 90 bp | GCTGGCTTGTCTTCACTGTCACAGACCTTTGGAGTAGGAACTGGGCAGATAAAACATGTTCTCCGACTTTaGAGAGACCTGGTGAGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: AGLSSLSQTFGVGTGQIKHVLRL*RDLVRS Trigger: GCTCCTCACCAGGTCTCTGCAAAGTCGGAGAACATG...TTTTATCTGCCCAGTTCCTACTCCAAAGGTCTGTGACAGTGAAGACAAGCCAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018485.4 ENSMUST00000117441.8 |
||
| CDS-3UTR GCA 90 bp | AGCATGACTATCTTGGGGTCCTTTCTATATGATATCAGTGTTGGTGTATTGCCACACCCCGGATGGAGCTaGACCCTCCTTGGCTCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: SMTILGSFLYDISVGVLPHPGWS*TLLGSL Trigger: CAGAGAGCCAAGGAGGGTGCAGCTCCATCCGGGGTG...TGGCAATACACCAACACTGATATCATATAGAAAGGACCCCAAGATAGTCATGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018485.4 ENSMUST00000117441.8 |
||
| CDS-3UTR CCA 90 bp | ACAGACCTTTGGAGTAGGAACTGGGCAGATAAAATGAGGTACGTTGGCTTTCTAGAGCTGCACCCTCCTTaGCTCTCTGACAGTGCATGC | + |
|
Preference number: 4 (lower is better) Translates to: TDLWSRNWADKMRYVGFLELHPP*LSDSAC Trigger: GCATGCACTGTCAGAGAGCCAAGGAGGGTGCAGCTC...TAGAAAGCCAACGTACCTCATTTTATCTGCCCAGTTCCTACTCCAAAGGTCTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018485.4 ENSMUST00000117441.8 |
||
| CDS-3UTR CCA 90 bp | ACAGACCTTTGGAGTAGGAACTGGGCAGATAAAATGAGGTACGTTGGCTTTCTACTGGTGCTTTGTGCTTaGAGTCACCCCGGATGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: TDLWSRNWADKMRYVGFLLVLCA*SHPGWS Trigger: GCTCCATCCGGGGTGACTCCAAGCACAAAGCACCAG...TAGAAAGCCAACGTACCTCATTTTATCTGCCCAGTTCCTACTCCAAAGGTCTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018485.4 ENSMUST00000117441.8 |
||
| CDS-3UTR CCA 90 bp | GAGAGCATGCTAAGTCAGGCCATAGTTAGGAAGAAACATCAGCAAGGTATGGGTAGGGGCTGGTCAGGTTaGCCAGTTTTGAGTCAGGGT | + |
|
Preference number: 4 (lower is better) Translates to: ESMLSQAIVRKKHQQGMGRGWSG*PVLSQG Trigger: ACCCTGACTCAAAACTGGCCAACCTGACCAGCCCCT...ACCCATACCTTGCTGATGTTTCTTCCTAACTATGGCCTGACTTAGCATGCTCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117441.8 |
||
| CDS-3UTR TCA 90 bp | GCTGGCTTGTCTTCACTGTCACAGACCTTTGGAGTAGGAACTGGGCAGATAAAAGGAAATATTGGCAGCTaGCCCAAGAGGAATCACAGG | + |
|
Preference number: 4 (lower is better) Translates to: AGLSSLSQTFGVGTGQIKGNIGS*PKRNHR Trigger: CCTGTGATTCCTCTTGGGTCAGCTGCCAATATTTCC...TTTTATCTGCCCAGTTCCTACTCCAAAGGTCTGTGACAGTGAAGACAAGCCAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018485.4 |
||
| CDS-3UTR TCA 90 bp | GAGAGCATGCTAAGTCAGGCCATAGTTAGGAAGAAACATCAGCAAGGTATGGGTCAGGTTGGCCAGTTTTaGGTCAGGGTCTCTGCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: ESMLSQAIVRKKHQQGMGQVGQF*VRVSAF Trigger: GAAAGCAGAGACCCTGACTCAAAACTGGCCAACCTG...ACCCATACCTTGCTGATGTTTCTTCCTAACTATGGCCTGACTTAGCATGCTCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117441.8 |
||
| CDS-3UTR GCA 90 bp | ACAGACCTTTGGAGTAGGAACTGGGCAGATAAAATGAGGTACGTTGGCTTTCTAAGGATGCAGCCCCTTTaGTCCGGGAATGGAATGTGG | + |
|
Preference number: 4 (lower is better) Translates to: TDLWSRNWADKMRYVGFLRMQPL*SGNGMW Trigger: CCACATTCCATTCCCGGAGCAAAGGGGCTGCATCCT...TAGAAAGCCAACGTACCTCATTTTATCTGCCCAGTTCCTACTCCAAAGGTCTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018485.4 ENSMUST00000117441.8 |
||
| CDS-3UTR CCA 90 bp | TGGCTTGTCTTCACTGTCACAGACCTTTGGAGTAGGAACTGGGCAGATAAAATGAAGCGCCTTTTGAGTTaGCTGCAGACACTGATGCCG | + |
|
Preference number: 4 (lower is better) Translates to: WLVFTVTDLWSRNWADKMKRLLS*LQTLMP Trigger: CGGCATCAGTGTCTGCAGCCAACTCAAAAGGCGCTT...CATTTTATCTGCCCAGTTCCTACTCCAAAGGTCTGTGACAGTGAAGACAAGCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018485.4 ENSMUST00000117441.8 |
||
| CDS-3UTR CCA 90 bp | AGTACCTATGGTGAAGCTAATTTTATCCAGAGACAGCTGGCTTGTCTTCACTGTGAGCTGCACCCTCCTTaGCTCTCTGACAGTGCATGC | + |
|
Preference number: 4 (lower is better) Translates to: STYGEANFIQRQLACLHCELHPP*LSDSAC Trigger: GCATGCACTGTCAGAGAGCCAAGGAGGGTGCAGCTC...ACAGTGAAGACAAGCCAGCTGTCTCTGGATAAAATTAGCTTCACCATAGGTACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018485.4 ENSMUST00000117441.8 |
||
| CDS-3UTR CCA 90 bp | AAAACTGTCTTGAACCTTTCAAGTGGCACTGGACGTAATCAGTGGTATGATAGGCTGGTGCTTTGTGCTTaGAGTCACCCCGGATGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: KTVLNLSSGTGRNQWYDRLVLCA*SHPGWS Trigger: GCTCCATCCGGGGTGACTCCAAGCACAAAGCACCAG...CCTATCATACCACTGATTACGTCCAGTGCCACTTGAAAGGTTCAAGACAGTTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117441.8 |
||
| CDS-3UTR CCA 90 bp | ACAGACCTTTGGAGTAGGAACTGGGCAGATAAAATGAGGTACGTTGGCTTTCTAGTGAGGGCCACTCACTaGTGCTTTGTGCTTGGAGTC | + |
|
Preference number: 4 (lower is better) Translates to: TDLWSRNWADKMRYVGFLVRATH*CFVLGV Trigger: GACTCCAAGCACAAAGCACCAGTGAGTGGCCCTCAC...TAGAAAGCCAACGTACCTCATTTTATCTGCCCAGTTCCTACTCCAAAGGTCTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018485.4 ENSMUST00000117441.8 |
||
| CDS-3UTR TCA 90 bp | AGTACCTATGGTGAAGCTAATTTTATCCAGAGACAGCTGGCTTGTCTTCACTGTGTGATGGCAGTAATGTaGGGGCCACTCACTGGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: STYGEANFIQRQLACLHCVMAVM*GPLTGA Trigger: AGCACCAGTGAGTGGCCCTCACATTACTGCCATCAC...ACAGTGAAGACAAGCCAGCTGTCTCTGGATAAAATTAGCTTCACCATAGGTACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018485.4 ENSMUST00000117441.8 |
||
| CDS-3UTR TCA 90 bp | ACAGACCTTTGGAGTAGGAACTGGGCAGATAAAATGAGGTACGTTGGCTTTCTACAGGTTGGCCAGTTTTaGGTCAGGGTCTCTGCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: TDLWSRNWADKMRYVGFLQVGQF*VRVSAF Trigger: GAAAGCAGAGACCCTGACTCAAAACTGGCCAACCTG...TAGAAAGCCAACGTACCTCATTTTATCTGCCCAGTTCCTACTCCAAAGGTCTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018485.4 ENSMUST00000117441.8 |
||
| CDS-3UTR GCA 90 bp | AAAACTGTCTTGAACCTTTCAAGTGGCACTGGACGTAATCAGTGGTATGATAGGAGGATGCAGCCCCTTTaGTCCGGGAATGGAATGTGG | + |
|
Preference number: 4 (lower is better) Translates to: KTVLNLSSGTGRNQWYDRRMQPL*SGNGMW Trigger: CCACATTCCATTCCCGGAGCAAAGGGGCTGCATCCT...CCTATCATACCACTGATTACGTCCAGTGCCACTTGAAAGGTTCAAGACAGTTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117441.8 |
||
| CDS-3UTR CCA 90 bp | AGTCAGGCCATAGTTAGGAAGAAACATCAGCAAGGTATGGGTTCTTGTAGACCAAAGCGCCTTTTGAGTTaGCTGCAGACACTGATGCCG | + |
|
Preference number: 4 (lower is better) Translates to: SQAIVRKKHQQGMGSCRPKRLLS*LQTLMP Trigger: CGGCATCAGTGTCTGCAGCCAACTCAAAAGGCGCTT...TGGTCTACAAGAACCCATACCTTGCTGATGTTTCTTCCTAACTATGGCCTGACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117441.8 |
||
| CDS-3UTR CCA 90 bp | AGTACCTATGGTGAAGCTAATTTTATCCAGAGACAGCTGGCTTGTCTTCACTGTCAGGCTCTTCAGGAGTaGGCCATGCCATCAGGAGAT | + |
|
Preference number: 4 (lower is better) Translates to: STYGEANFIQRQLACLHCQALQE*AMPSGD Trigger: ATCTCCTGATGGCATGGCCCACTCCTGAAGAGCCTG...ACAGTGAAGACAAGCCAGCTGTCTCTGGATAAAATTAGCTTCACCATAGGTACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018485.4 ENSMUST00000117441.8 |
||
| CDS-3UTR TCA 90 bp | TGGCTTGTCTTCACTGTCACAGACCTTTGGAGTAGGAACTGGGCAGATAAAATGTCCTTCCTGGACACATaGTATGTTTTGAGGTGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: WLVFTVTDLWSRNWADKMSFLDT*YVLRWL Trigger: GAGCCACCTCAAAACATATCATGTGTCCAGGAAGGA...CATTTTATCTGCCCAGTTCCTACTCCAAAGGTCTGTGACAGTGAAGACAAGCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018485.4 |
||
| CDS-3UTR TCA 90 bp | AAATCCATCAAGAGTACATCAATTCATGACATTGCTGGTGAATTGGCCCAAGAATTTGCAGAGACCTGGTaGGGAGCCAGCAACCCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: KSIKSTSIHDIAGELAQEFAETW*GASNPV Trigger: CACTGGGTTGCTGGCTCCTCACCAGGTCTCTGCAAA...TTCTTGGGCCAATTCACCAGCAATGTCATGAATTGATGTACTCTTGATGGATTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117441.8 |
||
| CDS-3UTR CCA 90 bp | AAAACTGTCTTGAACCTTTCAAGTGGCACTGGACGTAATCAGTGGTATGATAGGCTTCGTGATGCTCCCTaGTTGGAGAGCTCTCCATTC | + |
|
Preference number: 4 (lower is better) Translates to: KTVLNLSSGTGRNQWYDRLRDAP*LESSPF Trigger: GAATGGAGAGCTCTCCAACCAGGGAGCATCACGAAG...CCTATCATACCACTGATTACGTCCAGTGCCACTTGAAAGGTTCAAGACAGTTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117441.8 |
||
| CDS-3UTR CCA 90 bp | ACAGACCTTTGGAGTAGGAACTGGGCAGATAAAATGAGGTACGTTGGCTTTCTAGGACATATGTCACCCTaGGCTGTAGGCTGCTTATTG | + |
|
Preference number: 4 (lower is better) Translates to: TDLWSRNWADKMRYVGFLGHMSP*AVGCLL Trigger: CAATAAGCAGCCTACAGCCCAGGGTGACATATGTCC...TAGAAAGCCAACGTACCTCATTTTATCTGCCCAGTTCCTACTCCAAAGGTCTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018485.4 ENSMUST00000117441.8 |
||
| CDS-3UTR CCA 90 bp | TGGCTTGTCTTCACTGTCACAGACCTTTGGAGTAGGAACTGGGCAGATAAAATGTCCCTTTCATTTCCTTaGGGACTTTCACCAGCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: WLVFTVTDLWSRNWADKMSLSFP*GLSPAA Trigger: AGCTGCTGGTGAAAGTCCCCAAGGAAATGAAAGGGA...CATTTTATCTGCCCAGTTCCTACTCCAAAGGTCTGTGACAGTGAAGACAAGCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018485.4 ENSMUST00000117441.8 |
||
| CDS-3UTR CCA 90 bp | GCTGGCTTGTCTTCACTGTCACAGACCTTTGGAGTAGGAACTGGGCAGATAAAAGCTGTTTGCTGGATCTaGAATGGTTCTGCTATACCA | + |
|
Preference number: 4 (lower is better) Translates to: AGLSSLSQTFGVGTGQIKAVCWI*NGSAIP Trigger: TGGTATAGCAGAACCATTCCAGATCCAGCAAACAGC...TTTTATCTGCCCAGTTCCTACTCCAAAGGTCTGTGACAGTGAAGACAAGCCAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018485.4 ENSMUST00000117441.8 |
||
| CDS-3UTR CCA 90 bp | GCTGGCTTGTCTTCACTGTCACAGACCTTTGGAGTAGGAACTGGGCAGATAAAATTATCCGTAGGTAGCTaGATCTTCTCCTCCAGAATG | + |
|
Preference number: 4 (lower is better) Translates to: AGLSSLSQTFGVGTGQIKLSVGS*IFSSRM Trigger: CATTCTGGAGGAGAAGATCCAGCTACCTACGGATAA...TTTTATCTGCCCAGTTCCTACTCCAAAGGTCTGTGACAGTGAAGACAAGCCAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018485.4 ENSMUST00000117441.8 |
||
| CDS-3UTR CCA 90 bp | AGCATGACTATCTTGGGGTCCTTTCTATATGATATCAGTGTTGGTGTATTGCCAAGGGGCTGGTCAGGTTaGCCAGTTTTGAGTCAGGGT | + |
|
Preference number: 4 (lower is better) Translates to: SMTILGSFLYDISVGVLPRGWSG*PVLSQG Trigger: ACCCTGACTCAAAACTGGCCAACCTGACCAGCCCCT...TGGCAATACACCAACACTGATATCATATAGAAAGGACCCCAAGATAGTCATGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000018485.4 ENSMUST00000117441.8 |
||
| 3UTR CAA 72 bp | AGGGAGGGAGAGAGGAGGACGATGAGCATGACTATCTaGGGGTCCTTTCTATATGATATCAGTGTTGGTGTA | + |
|
Preference number: 4 (lower is better) Translates to: REGERRTMSMTI*GSFLYDISVGV Trigger: TACACCAACACTGATATCATATAGAAAGGACCCCAAGATAGTCATGCTCATCGTCCTCCTCTCTCCCTCCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117441.8 |
||
| CDS-3UTR TCA 90 bp | GAGAGCATGCTAAGTCAGGCCATAGTTAGGAAGAAACATCAGCAAGGTATGGGTTGTGGGTCCAGGAAATaGAAAGGCGTTCCTTTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: ESMLSQAIVRKKHQQGMGCGSRK*KGVPFS Trigger: AGAAAAAGGAACGCCTTTTCATTTCCTGGACCCACA...ACCCATACCTTGCTGATGTTTCTTCCTAACTATGGCCTGACTTAGCATGCTCTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000117441.8 |
||
| CDS-3UTR GCA 90 bp | AGAGAAAATCCATCAAGAGTACATCAATTCATGACATTGCTGGTGAATTGGCCCCATGTTCTCCGACTTTaGAGAGACCTGGTGAGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: RENPSRVHQFMTLLVNWPHVLRL*RDLVRS Trigger: GCTCCTCACCAGGTCTCTGCAAAGTCGGAGAACATG...GGGCCAATTCACCAGCAATGTCATGAATTGATGTACTCTTGATGGATTTTCTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117441.8 |
||
| CDS-3UTR GCA 90 bp | GCTGGCTTGTCTTCACTGTCACAGACCTTTGGAGTAGGAACTGGGCAGATAAAAACTTCTTTACCCAAGTaGTGTTTGCTGGATCTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: AGLSSLSQTFGVGTGQIKTSLPK*CLLDLE Trigger: TTCCAGATCCAGCAAACAGCACTTGGGTAAAGAAGT...TTTTATCTGCCCAGTTCCTACTCCAAAGGTCTGTGACAGTGAAGACAAGCCAGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000018485.4 ENSMUST00000117441.8 |
||
| CDS-3UTR CCA 90 bp | ACAGACCTTTGGAGTAGGAACTGGGCAGATAAAATGAGGTACGTTGGCTTTCTAGTGAACAGCCTTGCTTaGGATTCAAGGAGCAGGAAA | + |
|
Preference number: 4 (lower is better) Translates to: TDLWSRNWADKMRYVGFLVNSLA*DSRSRK Trigger: TTTCCTGCTCCTTGAATCCCAAGCAAGGCTGTTCAC...TAGAAAGCCAACGTACCTCATTTTATCTGCCCAGTTCCTACTCCAAAGGTCTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018485.4 |
||
| CDS-3UTR CCA 90 bp | AGCATGACTATCTTGGGGTCCTTTCTATATGATATCAGTGTTGGTGTATTGCCACTTCGTGATGCTCCCTaGTTGGAGAGCTCTCCATTC | + |
|
Preference number: 4 (lower is better) Translates to: SMTILGSFLYDISVGVLPLRDAP*LESSPF Trigger: GAATGGAGAGCTCTCCAACCAGGGAGCATCACGAAG...TGGCAATACACCAACACTGATATCATATAGAAAGGACCCCAAGATAGTCATGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018485.4 ENSMUST00000117441.8 |
||
| CDS-3UTR CCA 90 bp | AGTCAGGCCATAGTTAGGAAGAAACATCAGCAAGGTATGGGTTCTTGTAGACCATCCCTTTCATTTCCTTaGGGACTTTCACCAGCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: SQAIVRKKHQQGMGSCRPSLSFP*GLSPAA Trigger: AGCTGCTGGTGAAAGTCCCCAAGGAAATGAAAGGGA...TGGTCTACAAGAACCCATACCTTGCTGATGTTTCTTCCTAACTATGGCCTGACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117441.8 |
||
| CDS-3UTR CCA 90 bp | GCTGGCTTGTCTTCACTGTCACAGACCTTTGGAGTAGGAACTGGGCAGATAAAATTGCTGGATCTGGAATaGTTCTGCTATACCATTGAG | + |
|
Preference number: 4 (lower is better) Translates to: AGLSSLSQTFGVGTGQIKLLDLE*FCYTIE Trigger: CTCAATGGTATAGCAGAACCATTCCAGATCCAGCAA...TTTTATCTGCCCAGTTCCTACTCCAAAGGTCTGTGACAGTGAAGACAAGCCAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018485.4 ENSMUST00000117441.8 |
||
| CDS-3UTR CCA 90 bp | TGGCTTGTCTTCACTGTCACAGACCTTTGGAGTAGGAACTGGGCAGATAAAATGGCTGTTTGCTGGATCTaGAATGGTTCTGCTATACCA | + |
|
Preference number: 4 (lower is better) Translates to: WLVFTVTDLWSRNWADKMAVCWI*NGSAIP Trigger: TGGTATAGCAGAACCATTCCAGATCCAGCAAACAGC...CATTTTATCTGCCCAGTTCCTACTCCAAAGGTCTGTGACAGTGAAGACAAGCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018485.4 ENSMUST00000117441.8 |
||
| CDS-3UTR CCA 90 bp | AAATCCATCAAGAGTACATCAATTCATGACATTGCTGGTGAATTGGCCCAAGAACAGGCTCTTCAGGAGTaGGCCATGCCATCAGGAGAT | + |
|
Preference number: 4 (lower is better) Translates to: KSIKSTSIHDIAGELAQEQALQE*AMPSGD Trigger: ATCTCCTGATGGCATGGCCCACTCCTGAAGAGCCTG...TTCTTGGGCCAATTCACCAGCAATGTCATGAATTGATGTACTCTTGATGGATTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117441.8 |
||
| CDS-3UTR CCA 90 bp | ACAGACCTTTGGAGTAGGAACTGGGCAGATAAAATGAGGTACGTTGGCTTTCTATGGTTGTCTGACAACTaGGATCATGTGGTAGAGGAC | + |
|
Preference number: 4 (lower is better) Translates to: TDLWSRNWADKMRYVGFLWLSDN*DHVVED Trigger: GTCCTCTACCACATGATCCCAGTTGTCAGACAACCA...TAGAAAGCCAACGTACCTCATTTTATCTGCCCAGTTCCTACTCCAAAGGTCTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018485.4 ENSMUST00000117441.8 |
||
| CDS-3UTR TCA 90 bp | AGCATGACTATCTTGGGGTCCTTTCTATATGATATCAGTGTTGGTGTATTGCCACAAGGGACAGGTTGGTaGCTTGAAAAGTGGAGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: SMTILGSFLYDISVGVLPQGTGW*LEKWRS Trigger: ACTCCTCCACTTTTCAAGTCACCAACCTGTCCCTTG...TGGCAATACACCAACACTGATATCATATAGAAAGGACCCCAAGATAGTCATGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018485.4 |
||
| CDS-3UTR TCA 90 bp | TGGCTTGTCTTCACTGTCACAGACCTTTGGAGTAGGAACTGGGCAGATAAAATGGAACGTATGCGGAAGTaGAGAAGAATTTCCAAGATC | + |
|
Preference number: 4 (lower is better) Translates to: WLVFTVTDLWSRNWADKMERMRK*RRISKI Trigger: GATCTTGGAAATTCTTCTTCACTTCCGCATACGTTC...CATTTTATCTGCCCAGTTCCTACTCCAAAGGTCTGTGACAGTGAAGACAAGCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018485.4 |
||
| CDS-3UTR TCA 90 bp | GAGAGCATGCTAAGTCAGGCCATAGTTAGGAAGAAACATCAGCAAGGTATGGGTACAGTGCATGCACCCTaGTTTCATAACAGATATAGG | + |
|
Preference number: 4 (lower is better) Translates to: ESMLSQAIVRKKHQQGMGTVHAP*FHNRYR Trigger: CCTATATCTGTTATGAAATCAGGGTGCATGCACTGT...ACCCATACCTTGCTGATGTTTCTTCCTAACTATGGCCTGACTTAGCATGCTCTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117441.8 |
||
| CDS-3UTR TCA 90 bp | AGTCAGGCCATAGTTAGGAAGAAACATCAGCAAGGTATGGGTTCTTGTAGACCATGGGCGGAGAGAACTTaGTGCAAAAATGGAAAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: SQAIVRKKHQQGMGSCRPWAERT*CKNGKR Trigger: TCTCTTTCCATTTTTGCATCAAGTTCTCTCCGCCCA...TGGTCTACAAGAACCCATACCTTGCTGATGTTTCTTCCTAACTATGGCCTGACT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000117441.8 |
||
| CDS-3UTR GCA 90 bp | AAAACTGTCTTGAACCTTTCAAGTGGCACTGGACGTAATCAGTGGTATGATAGGCTTTCCAGTTGGCTTTaGCCTGTGGACAAAATTCCC | + |
|
Preference number: 4 (lower is better) Translates to: KTVLNLSSGTGRNQWYDRLSSWL*PVDKIP Trigger: GGGAATTTTGTCCACAGGGCAAAGCCAACTGGAAAG...CCTATCATACCACTGATTACGTCCAGTGCCACTTGAAAGGTTCAAGACAGTTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117441.8 |
||
| CDS-3UTR CCA 90 bp | AAAACTGTCTTGAACCTTTCAAGTGGCACTGGACGTAATCAGTGGTATGATAGGTCCGGGAATGGAATGTaGGTCCAGGAAATGAAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: KTVLNLSSGTGRNQWYDRSGNGM*VQEMKR Trigger: CCTTTTCATTTCCTGGACCCACATTCCATTCCCGGA...CCTATCATACCACTGATTACGTCCAGTGCCACTTGAAAGGTTCAAGACAGTTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117441.8 |
||
| CDS-3UTR CCA 90 bp | AGCATGACTATCTTGGGGTCCTTTCTATATGATATCAGTGTTGGTGTATTGCCAGGACATATGTCACCCTaGGCTGTAGGCTGCTTATTG | + |
|
Preference number: 4 (lower is better) Translates to: SMTILGSFLYDISVGVLPGHMSP*AVGCLL Trigger: CAATAAGCAGCCTACAGCCCAGGGTGACATATGTCC...TGGCAATACACCAACACTGATATCATATAGAAAGGACCCCAAGATAGTCATGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018485.4 ENSMUST00000117441.8 |
||
| CDS-3UTR CCA 90 bp | GAGAGCATGCTAAGTCAGGCCATAGTTAGGAAGAAACATCAGCAAGGTATGGGTGTTGGCTTTGCCCTGTaGACAAAATTCCCTTTCATT | + |
|
Preference number: 4 (lower is better) Translates to: ESMLSQAIVRKKHQQGMGVGFAL*TKFPFI Trigger: AATGAAAGGGAATTTTGTCCACAGGGCAAAGCCAAC...ACCCATACCTTGCTGATGTTTCTTCCTAACTATGGCCTGACTTAGCATGCTCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117441.8 |
||
| CDS-3UTR CCA 90 bp | AGATTGACAGATGTTGAAACTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTATCCGTAGGTAGCTaGATCTTCTCCTCCAGAATG | + |
|
Preference number: 4 (lower is better) Translates to: RLTDVETVCVCVCVCVCVLSVGS*IFSSRM Trigger: CATTCTGGAGGAGAAGATCCAGCTACCTACGGATAA...CACACACACACACACACACACACACACACACACAGTTTCAACATCTGTCAATCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117441.8 |
||
| CDS-3UTR TCA 90 bp | AGTACCTATGGTGAAGCTAATTTTATCCAGAGACAGCTGGCTTGTCTTCACTGTACACATGATATGTTTTaGGGTGGCTCTGGAGCAACA | + |
|
Preference number: 4 (lower is better) Translates to: STYGEANFIQRQLACLHCTHDMF*GGSGAT Trigger: TGTTGCTCCAGAGCCACCTCAAAACATATCATGTGT...ACAGTGAAGACAAGCCAGCTGTCTCTGGATAAAATTAGCTTCACCATAGGTACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018485.4 |
||
| CDS-3UTR TCA 90 bp | GCTGGCTTGTCTTCACTGTCACAGACCTTTGGAGTAGGAACTGGGCAGATAAAAGAAAAACATTGTTTCTaGCAGGTCAGATTGTTTGGT | + |
|
Preference number: 4 (lower is better) Translates to: AGLSSLSQTFGVGTGQIKEKHCF*QVRLFG Trigger: ACCAAACAATCTGACCTGTCAGAAACAATGTTTTTC...TTTTATCTGCCCAGTTCCTACTCCAAAGGTCTGTGACAGTGAAGACAAGCCAGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000018485.4 |
||
| CDS-3UTR TCA 90 bp | AGTACCTATGGTGAAGCTAATTTTATCCAGAGACAGCTGGCTTGTCTTCACTGTTGTGGGTCCAGGAAATaGAAAGGCGTTCCTTTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: STYGEANFIQRQLACLHCCGSRK*KGVPFS Trigger: AGAAAAAGGAACGCCTTTTCATTTCCTGGACCCACA...ACAGTGAAGACAAGCCAGCTGTCTCTGGATAAAATTAGCTTCACCATAGGTACT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000018485.4 ENSMUST00000117441.8 |
||
| CDS-3UTR GCA 90 bp | TGGCTTGTCTTCACTGTCACAGACCTTTGGAGTAGGAACTGGGCAGATAAAATGTGCTACAGTTTAGCTTaGAGACAAACAAGGTCATAC | + |
|
Preference number: 4 (lower is better) Translates to: WLVFTVTDLWSRNWADKMCYSLA*RQTRSY Trigger: GTATGACCTTGTTTGTCTGCAAGCTAAACTGTAGCA...CATTTTATCTGCCCAGTTCCTACTCCAAAGGTCTGTGACAGTGAAGACAAGCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018485.4 |
||
| CDS-3UTR GCA 90 bp | TGGCTTGTCTTCACTGTCACAGACCTTTGGAGTAGGAACTGGGCAGATAAAATGGCTTCTTTTGAGAGTTaGTACAGTTTAGCTTGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: WLVFTVTDLWSRNWADKMASFES*YSLACR Trigger: TCTGCAAGCTAAACTGTAGCAACTCTCAAAAGAAGC...CATTTTATCTGCCCAGTTCCTACTCCAAAGGTCTGTGACAGTGAAGACAAGCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018485.4 |
||
| CDS-3UTR GCA 90 bp | CTATCTTGGGGTCCTTTCTATATGATATCAGTGTTGGTGTATTGCCACCTTATCCCCTGGGCTGTAGGCTaGTTATTGGATGTGAGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: LSWGPFYMISVLVYCHLIPWAVG*LLDVSF Trigger: AAAACTCACATCCAATAAGCAGCCTACAGCCCAGGG...GATAAGGTGGCAATACACCAACACTGATATCATATAGAAAGGACCCCAAGATAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018485.4 ENSMUST00000117441.8 |
||
| CDS-3UTR GCA 90 bp | ATCTTGGGGTCCTTTCTATATGATATCAGTGTTGGTGTATTGCCACCTTATCCACCCTGGGCTGTAGGCTaGTTATTGGATGTGAGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: ILGSFLYDISVGVLPPYPPWAVG*LLDVSF Trigger: AAAACTCACATCCAATAAGCAGCCTACAGCCCAGGG...TGGATAAGGTGGCAATACACCAACACTGATATCATATAGAAAGGACCCCAAGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018485.4 ENSMUST00000117441.8 |
||
| CDS-3UTR GCA 90 bp | CTATCTTGGGGTCCTTTCTATATGATATCAGTGTTGGTGTATTGCCACCTTATCCTTTCCAGTTGGCTTTaGCCTGTGGACAAAATTCCC | + |
|
Preference number: 4 (lower is better) Translates to: LSWGPFYMISVLVYCHLILSSWL*PVDKIP Trigger: GGGAATTTTGTCCACAGGGCAAAGCCAACTGGAAAG...GATAAGGTGGCAATACACCAACACTGATATCATATAGAAAGGACCCCAAGATAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018485.4 ENSMUST00000117441.8 |
||
| CDS-3UTR GCA 90 bp | ACAGACCTTTGGAGTAGGAACTGGGCAGATAAAATGAGGTACGTTGGCTTTCTAACTTCTTTACCCAAGTaGTGTTTGCTGGATCTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: TDLWSRNWADKMRYVGFLTSLPK*CLLDLE Trigger: TTCCAGATCCAGCAAACAGCACTTGGGTAAAGAAGT...TAGAAAGCCAACGTACCTCATTTTATCTGCCCAGTTCCTACTCCAAAGGTCTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018485.4 ENSMUST00000117441.8 |
||
| CDS-3UTR CCA 90 bp | TGGCTTGTCTTCACTGTCACAGACCTTTGGAGTAGGAACTGGGCAGATAAAATGTGGACTTTCTTGCCATaGAGATTTTCAACAAGGACA | + |
|
Preference number: 4 (lower is better) Translates to: WLVFTVTDLWSRNWADKMWTFLP*RFSTRT Trigger: TGTCCTTGTTGAAAATCTCCATGGCAAGAAAGTCCA...CATTTTATCTGCCCAGTTCCTACTCCAAAGGTCTGTGACAGTGAAGACAAGCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018485.4 |
||
| CDS-3UTR CCA 90 bp | AGCATGACTATCTTGGGGTCCTTTCTATATGATATCAGTGTTGGTGTATTGCCATCCGGGAATGGAATGTaGGTCCAGGAAATGAAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: SMTILGSFLYDISVGVLPSGNGM*VQEMKR Trigger: CCTTTTCATTTCCTGGACCCACATTCCATTCCCGGA...TGGCAATACACCAACACTGATATCATATAGAAAGGACCCCAAGATAGTCATGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018485.4 ENSMUST00000117441.8 |
||
| CDS-3UTR CCA 90 bp | AGCATGACTATCTTGGGGTCCTTTCTATATGATATCAGTGTTGGTGTATTGCCACGAATGCTTTCCAGTTaGCTTTGCCCTGTGGACAAA | + |
|
Preference number: 4 (lower is better) Translates to: SMTILGSFLYDISVGVLPRMLSS*LCPVDK Trigger: TTTGTCCACAGGGCAAAGCCAACTGGAAAGCATTCG...TGGCAATACACCAACACTGATATCATATAGAAAGGACCCCAAGATAGTCATGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018485.4 ENSMUST00000117441.8 |
||
| CDS-3UTR CCA 90 bp | CTATCTTGGGGTCCTTTCTATATGATATCAGTGTTGGTGTATTGCCACCTTATCCGAATGCTTTCCAGTTaGCTTTGCCCTGTGGACAAA | + |
|
Preference number: 4 (lower is better) Translates to: LSWGPFYMISVLVYCHLIRMLSS*LCPVDK Trigger: TTTGTCCACAGGGCAAAGCCAACTGGAAAGCATTCG...GATAAGGTGGCAATACACCAACACTGATATCATATAGAAAGGACCCCAAGATAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018485.4 ENSMUST00000117441.8 |
||
| CDS-3UTR CCA 90 bp | CTATCTTGGGGTCCTTTCTATATGATATCAGTGTTGGTGTATTGCCACCTTATCTGGTTGTCTGACAACTaGGATCATGTGGTAGAGGAC | + |
|
Preference number: 4 (lower is better) Translates to: LSWGPFYMISVLVYCHLIWLSDN*DHVVED Trigger: GTCCTCTACCACATGATCCCAGTTGTCAGACAACCA...GATAAGGTGGCAATACACCAACACTGATATCATATAGAAAGGACCCCAAGATAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018485.4 ENSMUST00000117441.8 |
||
| CDS-3UTR TCA 90 bp | ATCTTGGGGTCCTTTCTATATGATATCAGTGTTGGTGTATTGCCACCTTATCCAACTGGTGGCTTCTTTTaGGAGTTGCTACAGTTTAGC | + |
|
Preference number: 4 (lower is better) Translates to: ILGSFLYDISVGVLPPYPTGGFF*ELLQFS Trigger: GCTAAACTGTAGCAACTCTCAAAAGAAGCCACCAGT...TGGATAAGGTGGCAATACACCAACACTGATATCATATAGAAAGGACCCCAAGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018485.4 |
||
| CDS-3UTR TCA 90 bp | AGTACCTATGGTGAAGCTAATTTTATCCAGAGACAGCTGGCTTGTCTTCACTGTACAGTGCATGCACCCTaGTTTCATAACAGATATAGG | + |
|
Preference number: 4 (lower is better) Translates to: STYGEANFIQRQLACLHCTVHAP*FHNRYR Trigger: CCTATATCTGTTATGAAATCAGGGTGCATGCACTGT...ACAGTGAAGACAAGCCAGCTGTCTCTGGATAAAATTAGCTTCACCATAGGTACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018485.4 ENSMUST00000117441.8 |
||
| CDS-3UTR TCA 90 bp | TGGCTTGTCTTCACTGTCACAGACCTTTGGAGTAGGAACTGGGCAGATAAAATGGAAAGAGAAATATGTTaGTGCTCCAGGTCAAAAGAA | + |
|
Preference number: 4 (lower is better) Translates to: WLVFTVTDLWSRNWADKMEREIC*CSRSKE Trigger: TTCTTTTGACCTGGAGCATCAACATATTTCTCTTTC...CATTTTATCTGCCCAGTTCCTACTCCAAAGGTCTGTGACAGTGAAGACAAGCCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018485.4 ENSMUST00000117441.8 |
||
| CDS-3UTR TCA 90 bp | AGCATGACTATCTTGGGGTCCTTTCTATATGATATCAGTGTTGGTGTATTGCCATGGGCGGAGAGAACTTaGTGCAAAAATGGAAAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: SMTILGSFLYDISVGVLPWAERT*CKNGKR Trigger: TCTCTTTCCATTTTTGCATCAAGTTCTCTCCGCCCA...TGGCAATACACCAACACTGATATCATATAGAAAGGACCCCAAGATAGTCATGCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000018485.4 ENSMUST00000117441.8 |
||
| CDS-3UTR CCA 90 bp | AGTACCTATGGTGAAGCTAATTTTATCCAGAGACAGCTGGCTTGTCTTCACTGTGTTGGCTTTGCCCTGTaGACAAAATTCCCTTTCATT | + |
|
Preference number: 4 (lower is better) Translates to: STYGEANFIQRQLACLHCVGFAL*TKFPFI Trigger: AATGAAAGGGAATTTTGTCCACAGGGCAAAGCCAAC...ACAGTGAAGACAAGCCAGCTGTCTCTGGATAAAATTAGCTTCACCATAGGTACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018485.4 ENSMUST00000117441.8 |
||
| CDS-3UTR CCA 90 bp | GCTGGCTTGTCTTCACTGTCACAGACCTTTGGAGTAGGAACTGGGCAGATAAAATCTTTTGAAGTAATATaGTTGTCTGACAACTGGGAT | + |
|
Preference number: 4 (lower is better) Translates to: AGLSSLSQTFGVGTGQIKSFEVI*LSDNWD Trigger: ATCCCAGTTGTCAGACAACCATATTACTTCAAAAGA...TTTTATCTGCCCAGTTCCTACTCCAAAGGTCTGTGACAGTGAAGACAAGCCAGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018485.4 ENSMUST00000117441.8 |
||
| CDS-3UTR TCA 90 bp | AGTACCTATGGTGAAGCTAATTTTATCCAGAGACAGCTGGCTTGTCTTCACTGTAAAAAGAAGTGCCAATaGGCATTCTCTAACAGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: STYGEANFIQRQLACLHCKKKCQ*AFSNSL Trigger: CAGACTGTTAGAGAATGCTCATTGGCACTTCTTTTT...ACAGTGAAGACAAGCCAGCTGTCTCTGGATAAAATTAGCTTCACCATAGGTACT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000018485.4 |
||
| CDS-3UTR TCA 90 bp | ATCTTGGGGTCCTTTCTATATGATATCAGTGTTGGTGTATTGCCACCTTATCCAAGTAATATGGTTGTCTaGCAACTGGGATCATGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: ILGSFLYDISVGVLPPYPSNMVV*QLGSCG Trigger: ACCACATGATCCCAGTTGTCAGACAACCATATTACT...TGGATAAGGTGGCAATACACCAACACTGATATCATATAGAAAGGACCCCAAGAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018485.4 ENSMUST00000117441.8 |
||
| CDS-3UTR GCA 90 bp | ACAGACCTTTGGAGTAGGAACTGGGCAGATAAAATGAGGTACGTTGGCTTTCTAATTGGCAATATACATTaGATCTTGCTTGGAGGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: TDLWSRNWADKMRYVGFLIGNIH*ILLGGR Trigger: TCTACCTCCAAGCAAGATGCAATGTATATTGCCAAT...TAGAAAGCCAACGTACCTCATTTTATCTGCCCAGTTCCTACTCCAAAGGTCTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018485.4 ENSMUST00000117441.8 |
||
| CDS-3UTR CCA 90 bp | CTATCTTGGGGTCCTTTCTATATGATATCAGTGTTGGTGTATTGCCACCTTATCTTGCTGGATCTGGAATaGTTCTGCTATACCATTGAG | + |
|
Preference number: 4 (lower is better) Translates to: LSWGPFYMISVLVYCHLILLDLE*FCYTIE Trigger: CTCAATGGTATAGCAGAACCATTCCAGATCCAGCAA...GATAAGGTGGCAATACACCAACACTGATATCATATAGAAAGGACCCCAAGATAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018485.4 ENSMUST00000117441.8 |
||
| CDS-3UTR CCA 90 bp | ATCTTGGGGTCCTTTCTATATGATATCAGTGTTGGTGTATTGCCACCTTATCCATCTTCTCCTCCAGAATaGGATACTTCTTTACCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: ILGSFLYDISVGVLPPYPSSPPE*DTSLPK Trigger: CTTGGGTAAAGAAGTATCCCATTCTGGAGGAGAAGA...TGGATAAGGTGGCAATACACCAACACTGATATCATATAGAAAGGACCCCAAGAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018485.4 ENSMUST00000117441.8 |
||
| CDS-3UTR CCA 90 bp | AGAGAAAATCCATCAAGAGTACATCAATTCATGACATTGCTGGTGAATTGGCCCTCTTCTCCTCCAGAATaGGATACTTCTTTACCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: RENPSRVHQFMTLLVNWPSSPPE*DTSLPK Trigger: CTTGGGTAAAGAAGTATCCCATTCTGGAGGAGAAGA...GGGCCAATTCACCAGCAATGTCATGAATTGATGTACTCTTGATGGATTTTCTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117441.8 |
||
| CDS-3UTR GCA 90 bp | CTATCTTGGGGTCCTTTCTATATGATATCAGTGTTGGTGTATTGCCACCTTATCGGTCATGGACTTTCTTaGCATGGAGATTTTCAACAA | + |
|
Preference number: 4 (lower is better) Translates to: LSWGPFYMISVLVYCHLIGHGLS*HGDFQQ Trigger: TTGTTGAAAATCTCCATGGCAAGAAAGTCCATGACC...GATAAGGTGGCAATACACCAACACTGATATCATATAGAAAGGACCCCAAGATAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018485.4 |
||
| CDS-3UTR GCA 90 bp | AGTACCTATGGTGAAGCTAATTTTATCCAGAGACAGCTGGCTTGTCTTCACTGTAAGAACGTGAACGTATaGGGAAGTGAAGAAGAATTT | + |
|
Preference number: 4 (lower is better) Translates to: STYGEANFIQRQLACLHCKNVNV*GSEEEF Trigger: AAATTCTTCTTCACTTCCGCATACGTTCACGTTCTT...ACAGTGAAGACAAGCCAGCTGTCTCTGGATAAAATTAGCTTCACCATAGGTACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018485.4 |
||
| CDS-3UTR GCA 90 bp | ACAGACCTTTGGAGTAGGAACTGGGCAGATAAAATGAGGTACGTTGGCTTTCTATGTCTTGTAGTATTCTaGAGTGTTGTTTTCTTTGTC | + |
|
Preference number: 4 (lower is better) Translates to: TDLWSRNWADKMRYVGFLCLVVF*SVVFFV Trigger: GACAAAGAAAACAACACTGCAGAATACTACAAGACA...TAGAAAGCCAACGTACCTCATTTTATCTGCCCAGTTCCTACTCCAAAGGTCTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018485.4 ENSMUST00000117441.8 |
||
| CDS-3UTR TCA 90 bp | ATCTTGGGGTCCTTTCTATATGATATCAGTGTTGGTGTATTGCCACCTTATCCAGAAAGAGAAATATGTTaGTGCTCCAGGTCAAAAGAA | + |
|
Preference number: 4 (lower is better) Translates to: ILGSFLYDISVGVLPPYPEREIC*CSRSKE Trigger: TTCTTTTGACCTGGAGCATCAACATATTTCTCTTTC...TGGATAAGGTGGCAATACACCAACACTGATATCATATAGAAAGGACCCCAAGAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018485.4 ENSMUST00000117441.8 |
||
| CDS-3UTR GCA 90 bp | ATCTTGGGGTCCTTTCTATATGATATCAGTGTTGGTGTATTGCCACCTTATCCAGCACACATCTATATTTaGTTTAATCAGCAGCCACAT | + |
|
Preference number: 4 (lower is better) Translates to: ILGSFLYDISVGVLPPYPAHIYI*FNQQPH Trigger: ATGTGGCTGCTGATTAAAGCAAATATAGATGTGTGC...TGGATAAGGTGGCAATACACCAACACTGATATCATATAGAAAGGACCCCAAGAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018485.4 |
||
| CDS-3UTR GCA 90 bp | CTATCTTGGGGTCCTTTCTATATGATATCAGTGTTGGTGTATTGCCACCTTATCATTGGCAATATACATTaGATCTTGCTTGGAGGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: LSWGPFYMISVLVYCHLIIGNIH*ILLGGR Trigger: TCTACCTCCAAGCAAGATGCAATGTATATTGCCAAT...GATAAGGTGGCAATACACCAACACTGATATCATATAGAAAGGACCCCAAGATAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018485.4 ENSMUST00000117441.8 |
||
| CDS-3UTR CCA 90 bp | AGTACCTATGGTGAAGCTAATTTTATCCAGAGACAGCTGGCTTGTCTTCACTGTTCTTTTGAAGTAATATaGTTGTCTGACAACTGGGAT | + |
|
Preference number: 4 (lower is better) Translates to: STYGEANFIQRQLACLHCSFEVI*LSDNWD Trigger: ATCCCAGTTGTCAGACAACCATATTACTTCAAAAGA...ACAGTGAAGACAAGCCAGCTGTCTCTGGATAAAATTAGCTTCACCATAGGTACT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018485.4 ENSMUST00000117441.8 |
||
| CDS-3UTR CCA 90 bp | ATCTTGGGGTCCTTTCTATATGATATCAGTGTTGGTGTATTGCCACCTTATCCAACAGATCTTCTATGTTaGAGGGTAAATAGCCTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: ILGSFLYDISVGVLPPYPTDLLC*RVNSLH Trigger: ATGAAGGCTATTTACCCTCCAACATAGAAGATCTGT...TGGATAAGGTGGCAATACACCAACACTGATATCATATAGAAAGGACCCCAAGAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018485.4 ENSMUST00000117441.8 |
||
| CDS-3UTR GCA 90 bp | AAATCCATCAAGAGTACATCAATTCATGACATTGCTGGTGAATTGGCCCAAGAATGTCTTGTAGTATTCTaGAGTGTTGTTTTCTTTGTC | + |
|
Preference number: 4 (lower is better) Translates to: KSIKSTSIHDIAGELAQECLVVF*SVVFFV Trigger: GACAAAGAAAACAACACTGCAGAATACTACAAGACA...TTCTTGGGCCAATTCACCAGCAATGTCATGAATTGATGTACTCTTGATGGATTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117441.8 |
||
| CDS-3UTR CCA 90 bp | CATAGAAAGTTTGGTAAACAAAGACAAGTTTATAGGACTGGGTTATATGGGCATACAGATCTTCTATGTTaGAGGGTAAATAGCCTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: HRKFGKQRQVYRTGLYGHTDLLC*RVNSLH Trigger: ATGAAGGCTATTTACCCTCCAACATAGAAGATCTGT...ATGCCCATATAACCCAGTCCTATAAACTTGTCTTTGTTTACCAAACTTTCTATG 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117441.8 |
||
| CDS TCA 90 bp | GTGCTTGGAGTCACCCCGGATGGAGCTGCACCCTCCTTGGCTCTCTaGCAGTGCATGCACCCTGATTTCATAACAGATATAGGGCTTTAT | + |
|
Preference number: 5 (lower is better) Translates to: VLGVTPDGAAPSLAL*QCMHPDFITDIGLY Trigger: ATAAAGCCCTATATCTGTTATGAAATCAGGGTGCATGCACTGTCAGAGAGCCAAGGAGGGTGCAGCTCCATCCGGGGTGACTCCAAGCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018485.4 ENSMUST00000117441.8 |
||
| CDS CCA 90 bp | CACCAGCAGCTGTCACAGCTGTCATCCATAGGACATATGTCACCCTaGGCTGTAGGCTGCTTATTGGATGTGAGTTTTGAGAGCGTCGGT | + |
|
Preference number: 5 (lower is better) Translates to: HQQLSQLSSIGHMSP*AVGCLLDVSFESVG Trigger: ACCGACGCTCTCAAAACTCACATCCAATAAGCAGCCTACAGCCCAGGGTGACATATGTCCTATGGATGACAGCTGTGACAGCTGCTGGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018485.4 ENSMUST00000117441.8 |
||
| CDS-3UTR CAA 90 bp | TGGCTTGTCTTCACTGTCACAGACCTTTGGAGTAGGAACTGGGCAGATAAAATGCCACTCACTGGTGCTTaGTGCTTGGAGTCACCCCGG | + |
|
Preference number: 5 (lower is better) Translates to: WLVFTVTDLWSRNWADKMPLTGA*CLESPR Trigger: CCGGGGTGACTCCAAGCACAAAGCACCAGTGAGTGG...CATTTTATCTGCCCAGTTCCTACTCCAAAGGTCTGTGACAGTGAAGACAAGCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018485.4 ENSMUST00000117441.8 |
||
| CDS-3UTR CAA 90 bp | GCTGGCTTGTCTTCACTGTCACAGACCTTTGGAGTAGGAACTGGGCAGATAAAAGAGGATGCAGCCCCTTaGCTCCGGGAATGGAATGTG | + |
|
Preference number: 5 (lower is better) Translates to: AGLSSLSQTFGVGTGQIKEDAAP*LREWNV Trigger: CACATTCCATTCCCGGAGCAAAGGGGCTGCATCCTC...TTTTATCTGCCCAGTTCCTACTCCAAAGGTCTGTGACAGTGAAGACAAGCCAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018485.4 ENSMUST00000117441.8 |
||
| CDS-3UTR CAA 90 bp | ACAGACCTTTGGAGTAGGAACTGGGCAGATAAAATGAGGTACGTTGGCTTTCTACCACTCACTGGTGCTTaGTGCTTGGAGTCACCCCGG | + |
|
Preference number: 5 (lower is better) Translates to: TDLWSRNWADKMRYVGFLPLTGA*CLESPR Trigger: CCGGGGTGACTCCAAGCACAAAGCACCAGTGAGTGG...TAGAAAGCCAACGTACCTCATTTTATCTGCCCAGTTCCTACTCCAAAGGTCTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018485.4 ENSMUST00000117441.8 |
||
| CDS CCA 90 bp | CAGGAAATATTGGCAGCTGACCCAAGAGGAATCACAGGGGCAGGCTaGACGGTCACAGTGCCAAGCTTGCACACATCTATATTTGCTTTA | + |
|
Preference number: 5 (lower is better) Translates to: QEILAADPRGITGAG*TVTVPSLHTSIFAL Trigger: TAAAGCAAATATAGATGTGTGCAAGCTTGGCACTGTGACCGTCCAGCCTGCCCCTGTGATTCCTCTTGGGTCAGCTGCCAATATTTCCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018485.4 |
||
| CDS-3UTR CAA 90 bp | GCTGGCTTGTCTTCACTGTCACAGACCTTTGGAGTAGGAACTGGGCAGATAAAAGGACAGGTTGGTGACTaGAAAAGTGGAGGAGTGACC | + |
|
Preference number: 5 (lower is better) Translates to: AGLSSLSQTFGVGTGQIKGQVGD*KSGGVT Trigger: GGTCACTCCTCCACTTTTCAAGTCACCAACCTGTCC...TTTTATCTGCCCAGTTCCTACTCCAAAGGTCTGTGACAGTGAAGACAAGCCAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018485.4 |
||
| CDS-3UTR CAA 90 bp | AGTCAGGCCATAGTTAGGAAGAAACATCAGCAAGGTATGGGTTCTTGTAGACCAGAGGATGCAGCCCCTTaGCTCCGGGAATGGAATGTG | + |
|
Preference number: 5 (lower is better) Translates to: SQAIVRKKHQQGMGSCRPEDAAP*LREWNV Trigger: CACATTCCATTCCCGGAGCAAAGGGGCTGCATCCTC...TGGTCTACAAGAACCCATACCTTGCTGATGTTTCTTCCTAACTATGGCCTGACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117441.8 |
||
| CDS GCA 90 bp | TCACAGCTGTCATCCATAGGACATATGTCACCCTGGGCTGTAGGCTaGTTATTGGATGTGAGTTTTGAGAGCGTCGGTACTGAATTTCGC | + |
|
Preference number: 5 (lower is better) Translates to: SQLSSIGHMSPWAVG*LLDVSFESVGTEFR Trigger: GCGAAATTCAGTACCGACGCTCTCAAAACTCACATCCAATAAGCAGCCTACAGCCCAGGGTGACATATGTCCTATGGATGACAGCTGTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018485.4 ENSMUST00000117441.8 |
||
| CDS-3UTR CAA 90 bp | AGTCAGGCCATAGTTAGGAAGAAACATCAGCAAGGTATGGGTTCTTGTAGACCAGGAGGATCTTCCCCCTaGCCTCTGATGGATTCAGAC | + |
|
Preference number: 5 (lower is better) Translates to: SQAIVRKKHQQGMGSCRPGGSSP*PLMDSD Trigger: GTCTGAATCCATCAGAGGCAAGGGGGAAGATCCTCC...TGGTCTACAAGAACCCATACCTTGCTGATGTTTCTTCCTAACTATGGCCTGACT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000117441.8 |
||
| CDS-3UTR CAA 90 bp | AGTCAGGCCATAGTTAGGAAGAAACATCAGCAAGGTATGGGTTCTTGTAGACCACCATGTTCTCCGACTTaGCAGAGACCTGGTGAGGAG | + |
|
Preference number: 5 (lower is better) Translates to: SQAIVRKKHQQGMGSCRPPCSPT*QRPGEE Trigger: CTCCTCACCAGGTCTCTGCAAAGTCGGAGAACATGG...TGGTCTACAAGAACCCATACCTTGCTGATGTTTCTTCCTAACTATGGCCTGACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117441.8 |
||
| CDS-3UTR CAA 90 bp | GCTGGCTTGTCTTCACTGTCACAGACCTTTGGAGTAGGAACTGGGCAGATAAAATTCCCTTTCATTTCCTaGGGGACTTTCACCAGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: AGLSSLSQTFGVGTGQIKFPFIS*GTFTSS Trigger: GCTGCTGGTGAAAGTCCCCAAGGAAATGAAAGGGAA...TTTTATCTGCCCAGTTCCTACTCCAAAGGTCTGTGACAGTGAAGACAAGCCAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018485.4 ENSMUST00000117441.8 |
||
| CDS-3UTR CAA 90 bp | GCTGGCTTGTCTTCACTGTCACAGACCTTTGGAGTAGGAACTGGGCAGATAAAATCAGGTTGGCCAGTTTaGAGTCAGGGTCTCTGCTTT | + |
|
Preference number: 5 (lower is better) Translates to: AGLSSLSQTFGVGTGQIKSGWPV*SQGLCF Trigger: AAAGCAGAGACCCTGACTCAAAACTGGCCAACCTGA...TTTTATCTGCCCAGTTCCTACTCCAAAGGTCTGTGACAGTGAAGACAAGCCAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018485.4 ENSMUST00000117441.8 |
||
| CDS TCA 90 bp | CCAACTGAGATCTCCACCCCACATACTGGGACTGGTGGCTTCTTTTaGGAGTTGCTACAGTTTAGCTTGCAGACAAACAAGGTCATACCA | + |
|
Preference number: 5 (lower is better) Translates to: PTEISTPHTGTGGFF*ELLQFSLQTNKVIP Trigger: TGGTATGACCTTGTTTGTCTGCAAGCTAAACTGTAGCAACTCTCAAAAGAAGCCACCAGTCCCAGTATGTGGGGTGGAGATCTCAGTTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018485.4 |
||
| CDS TCA 90 bp | GGATGGAGCTGCACCCTCCTTGGCTCTCTGACAGTGCATGCACCCTaGTTTCATAACAGATATAGGGCTTTATGTTCTCTGAAATCAGAG | + |
|
Preference number: 5 (lower is better) Translates to: GWSCTLLGSLTVHAP*FHNRYRALCSLKSE Trigger: CTCTGATTTCAGAGAACATAAAGCCCTATATCTGTTATGAAATCAGGGTGCATGCACTGTCAGAGAGCCAAGGAGGGTGCAGCTCCATCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018485.4 ENSMUST00000117441.8 |
||
| CDS GCA 90 bp | AGATCTCCACCCCACATACTGGGACTGGTGGCTTCTTTTGAGAGTTaGTACAGTTTAGCTTGCAGACAAACAAGGTCATACCAAGGGACA | + |
|
Preference number: 5 (lower is better) Translates to: RSPPHILGLVASFES*YSLACRQTRSYQGT Trigger: TGTCCCTTGGTATGACCTTGTTTGTCTGCAAGCTAAACTGTAGCAACTCTCAAAAGAAGCCACCAGTCCCAGTATGTGGGGTGGAGATCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018485.4 |
||
| CDS GCA 90 bp | CTCAGCTGTGAGAGTTCCTGTAGCTTGTGGATTGGCAATATACATTaGATCTTGCTTGGAGGTAGAGTAGCCTTGGAATCCTTGGCCTCT | + |
|
Preference number: 5 (lower is better) Translates to: LSCESSCSLWIGNIH*ILLGGRVALESLAS Trigger: AGAGGCCAAGGATTCCAAGGCTACTCTACCTCCAAGCAAGATGCAATGTATATTGCCAATCCACAAGCTACAGGAACTCTCACAGCTGAG 48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018485.4 ENSMUST00000117441.8 |
||
| CDS-3UTR CAA 90 bp | AGTACCTATGGTGAAGCTAATTTTATCCAGAGACAGCTGGCTTGTCTTCACTGTCCATGTTCTCCGACTTaGCAGAGACCTGGTGAGGAG | + |
|
Preference number: 5 (lower is better) Translates to: STYGEANFIQRQLACLHCPCSPT*QRPGEE Trigger: CTCCTCACCAGGTCTCTGCAAAGTCGGAGAACATGG...ACAGTGAAGACAAGCCAGCTGTCTCTGGATAAAATTAGCTTCACCATAGGTACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018485.4 ENSMUST00000117441.8 |
||
| CDS-3UTR CAA 90 bp | ATCTTGGGGTCCTTTCTATATGATATCAGTGTTGGTGTATTGCCACCTTATCCAACTGGTGCTTTGTGCTaGGAGTCACCCCGGATGGAG | + |
|
Preference number: 5 (lower is better) Translates to: ILGSFLYDISVGVLPPYPTGALC*ESPRME Trigger: CTCCATCCGGGGTGACTCCAAGCACAAAGCACCAGT...TGGATAAGGTGGCAATACACCAACACTGATATCATATAGAAAGGACCCCAAGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018485.4 ENSMUST00000117441.8 |
||
| CDS-3UTR CAA 90 bp | TGGCTTGTCTTCACTGTCACAGACCTTTGGAGTAGGAACTGGGCAGATAAAATGTTCCCTTTCATTTCCTaGGGGACTTTCACCAGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: WLVFTVTDLWSRNWADKMFPFIS*GTFTSS Trigger: GCTGCTGGTGAAAGTCCCCAAGGAAATGAAAGGGAA...CATTTTATCTGCCCAGTTCCTACTCCAAAGGTCTGTGACAGTGAAGACAAGCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018485.4 ENSMUST00000117441.8 |
||
| CDS-3UTR CAA 90 bp | TGGCTTGTCTTCACTGTCACAGACCTTTGGAGTAGGAACTGGGCAGATAAAATGGGAGGTAGAGTAGCCTaGGAATCCTTGGCCTCTTTT | + |
|
Preference number: 5 (lower is better) Translates to: WLVFTVTDLWSRNWADKMGGRVA*ESLASF Trigger: AAAAGAGGCCAAGGATTCCAAGGCTACTCTACCTCC...CATTTTATCTGCCCAGTTCCTACTCCAAAGGTCTGTGACAGTGAAGACAAGCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018485.4 ENSMUST00000117441.8 |
||
| CDS TCA 90 bp | ACCCAAGTGCTGTTTGCTGGATCTGGAATGGTTCTGCTATACCATTaGGGTTTGAGAGTAGACAGGAGAGTAAATGCCTTTTGCCGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: TQVLFAGSGMVLLYH*GLRVDRRVNAFCRK Trigger: CTTCCGGCAAAAGGCATTTACTCTCCTGTCTACTCTCAAACCTCAATGGTATAGCAGAACCATTCCAGATCCAGCAAACAGCACTTGGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018485.4 ENSMUST00000117441.8 |
||
| CDS GCA 90 bp | TCCCACGGAGGAAGAGGGATCACTATGTCCAAGAACGTGAACGTATaGGGAAGTGAAGAAGAATTTCCAAGATCGTTGATGGCAGTAACA | + |
|
Preference number: 5 (lower is better) Translates to: SHGGRGITMSKNVNV*GSEEEFPRSLMAVT Trigger: TGTTACTGCCATCAACGATCTTGGAAATTCTTCTTCACTTCCGCATACGTTCACGTTCTTGGACATAGTGATCCCTCTTCCTCCGTGGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018485.4 |
||
| CDS CCA 90 bp | TTGGAATCCTTGGCCTCTTTTGAAGTAATATGGTTGTCTGACAACTaGGATCATGTGGTAGAGGACTTCATGGATGATCAGGGGCTCAGG | + |
|
Preference number: 5 (lower is better) Translates to: LESLASFEVIWLSDN*DHVVEDFMDDQGLR Trigger: CCTGAGCCCCTGATCATCCATGAAGTCCTCTACCACATGATCCCAGTTGTCAGACAACCATATTACTTCAAAAGAGGCCAAGGATTCCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018485.4 ENSMUST00000117441.8 |
||
| CDS-3UTR CAA 90 bp | ACAGACCTTTGGAGTAGGAACTGGGCAGATAAAATGAGGTACGTTGGCTTTCTATGTGAACAGCCTTGCTaGGGATTCAAGGAGCAGGAA | + |
|
Preference number: 5 (lower is better) Translates to: TDLWSRNWADKMRYVGFLCEQPC*GFKEQE Trigger: TTCCTGCTCCTTGAATCCCAAGCAAGGCTGTTCACA...TAGAAAGCCAACGTACCTCATTTTATCTGCCCAGTTCCTACTCCAAAGGTCTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018485.4 |
||
| CDS-3UTR CAA 90 bp | CTATCTTGGGGTCCTTTCTATATGATATCAGTGTTGGTGTATTGCCACCTTATCGGAGGATCTTCCCCCTaGCCTCTGATGGATTCAGAC | + |
|
Preference number: 5 (lower is better) Translates to: LSWGPFYMISVLVYCHLIGGSSP*PLMDSD Trigger: GTCTGAATCCATCAGAGGCAAGGGGGAAGATCCTCC...GATAAGGTGGCAATACACCAACACTGATATCATATAGAAAGGACCCCAAGATAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000018485.4 ENSMUST00000117441.8 |
||
| CDS-3UTR CAA 90 bp | CTATCTTGGGGTCCTTTCTATATGATATCAGTGTTGGTGTATTGCCACCTTATCGTGCAGAAGCGCCTTTaGAGTTGGCTGCAGACACTG | + |
|
Preference number: 5 (lower is better) Translates to: LSWGPFYMISVLVYCHLIVQKRL*SWLQTL Trigger: CAGTGTCTGCAGCCAACTCAAAAGGCGCTTCTGCAC...GATAAGGTGGCAATACACCAACACTGATATCATATAGAAAGGACCCCAAGATAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018485.4 ENSMUST00000117441.8 |
||
| CDS-3UTR CAA 90 bp | AGAGAAAATCCATCAAGAGTACATCAATTCATGACATTGCTGGTGAATTGGCCCGTGCAGAAGCGCCTTTaGAGTTGGCTGCAGACACTG | + |
|
Preference number: 5 (lower is better) Translates to: RENPSRVHQFMTLLVNWPVQKRL*SWLQTL Trigger: CAGTGTCTGCAGCCAACTCAAAAGGCGCTTCTGCAC...GGGCCAATTCACCAGCAATGTCATGAATTGATGTACTCTTGATGGATTTTCTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117441.8 |
||
| CDS-3UTR CAA 90 bp | AAATCCATCAAGAGTACATCAATTCATGACATTGCTGGTGAATTGGCCCAAGAAACTGGTGCTTTGTGCTaGGAGTCACCCCGGATGGAG | + |
|
Preference number: 5 (lower is better) Translates to: KSIKSTSIHDIAGELAQETGALC*ESPRME Trigger: CTCCATCCGGGGTGACTCCAAGCACAAAGCACCAGT...TTCTTGGGCCAATTCACCAGCAATGTCATGAATTGATGTACTCTTGATGGATTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117441.8 |
||
| CDS-3UTR CAA 90 bp | ACAGACCTTTGGAGTAGGAACTGGGCAGATAAAATGAGGTACGTTGGCTTTCTAACGAATGCTTTCCAGTaGGCTTTGCCCTGTGGACAA | + |
|
Preference number: 5 (lower is better) Translates to: TDLWSRNWADKMRYVGFLTNAFQ*ALPCGQ Trigger: TTGTCCACAGGGCAAAGCCAACTGGAAAGCATTCGT...TAGAAAGCCAACGTACCTCATTTTATCTGCCCAGTTCCTACTCCAAAGGTCTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018485.4 ENSMUST00000117441.8 |
||
| CDS-3UTR CAA 90 bp | GAGAGCATGCTAAGTCAGGCCATAGTTAGGAAGAAACATCAGCAAGGTATGGGTTTACCCAAGTGCTGTTaGCTGGATCTGGAATGGTTC | + |
|
Preference number: 5 (lower is better) Translates to: ESMLSQAIVRKKHQQGMGLPKCC*LDLEWF Trigger: GAACCATTCCAGATCCAGCAAACAGCACTTGGGTAA...ACCCATACCTTGCTGATGTTTCTTCCTAACTATGGCCTGACTTAGCATGCTCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117441.8 |
||
| CDS-3UTR CAA 90 bp | AGTCAGGCCATAGTTAGGAAGAAACATCAGCAAGGTATGGGTTCTTGTAGACCAGGAGGTAGAGTAGCCTaGGAATCCTTGGCCTCTTTT | + |
|
Preference number: 5 (lower is better) Translates to: SQAIVRKKHQQGMGSCRPGGRVA*ESLASF Trigger: AAAAGAGGCCAAGGATTCCAAGGCTACTCTACCTCC...TGGTCTACAAGAACCCATACCTTGCTGATGTTTCTTCCTAACTATGGCCTGACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117441.8 |
||
| CDS GCA 90 bp | GTAGCTGGATCTTCTCCTCCAGAATGGGATACTTCTTTACCCAAGTaGTGTTTGCTGGATCTGGAATGGTTCTGCTATACCATTGAGGTT | + |
|
Preference number: 5 (lower is better) Translates to: VAGSSPPEWDTSLPK*CLLDLEWFCYTIEV Trigger: AACCTCAATGGTATAGCAGAACCATTCCAGATCCAGCAAACAGCACTTGGGTAAAGAAGTATCCCATTCTGGAGGAGAAGATCCAGCTAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018485.4 ENSMUST00000117441.8 |
||
| CDS CCA 90 bp | CTCCAGAATGGGATACTTCTTTACCCAAGTGCTGTTTGCTGGATCTaGAATGGTTCTGCTATACCATTGAGGTTTGAGAGTAGACAGGAG | + |
|
Preference number: 5 (lower is better) Translates to: LQNGILLYPSAVCWI*NGSAIPLRFESRQE Trigger: CTCCTGTCTACTCTCAAACCTCAATGGTATAGCAGAACCATTCCAGATCCAGCAAACAGCACTTGGGTAAAGAAGTATCCCATTCTGGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018485.4 ENSMUST00000117441.8 |
||
| CDS-3UTR CAA 90 bp | GCTGGCTTGTCTTCACTGTCACAGACCTTTGGAGTAGGAACTGGGCAGATAAAAAATATACATTGCATCTaGCTTGGAGGTAGAGTAGCC | + |
|
Preference number: 5 (lower is better) Translates to: AGLSSLSQTFGVGTGQIKNIHCI*LGGRVA Trigger: GGCTACTCTACCTCCAAGCAAGATGCAATGTATATT...TTTTATCTGCCCAGTTCCTACTCCAAAGGTCTGTGACAGTGAAGACAAGCCAGC 46% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 2 transcripts: ENSMUST00000018485.4 ENSMUST00000117441.8 |
||
| CDS-3UTR CAA 90 bp | GCTGGCTTGTCTTCACTGTCACAGACCTTTGGAGTAGGAACTGGGCAGATAAAACCTGTAGCTTGTGGATaGGCAATATACATTGCATCT | + |
|
Preference number: 5 (lower is better) Translates to: AGLSSLSQTFGVGTGQIKPVACG*AIYIAS Trigger: AGATGCAATGTATATTGCCAATCCACAAGCTACAGG...TTTTATCTGCCCAGTTCCTACTCCAAAGGTCTGTGACAGTGAAGACAAGCCAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018485.4 ENSMUST00000117441.8 |
||
| CDS-3UTR CAA 90 bp | ACAGACCTTTGGAGTAGGAACTGGGCAGATAAAATGAGGTACGTTGGCTTTCTAGTGGGCGGAGAGAACTaGATGCAAAAATGGAAAGAG | + |
|
Preference number: 5 (lower is better) Translates to: TDLWSRNWADKMRYVGFLVGGEN*MQKWKE Trigger: CTCTTTCCATTTTTGCATCAAGTTCTCTCCGCCCAC...TAGAAAGCCAACGTACCTCATTTTATCTGCCCAGTTCCTACTCCAAAGGTCTGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000018485.4 ENSMUST00000117441.8 |
||
| CDS TCA 90 bp | AGGAAGAGGGATCACTATGTCCAAGAACGTGAACGTATGCGGAAGTaGAGAAGAATTTCCAAGATCGTTGATGGCAGTAACACGGACTAT | + |
|
Preference number: 5 (lower is better) Translates to: RKRDHYVQERERMRK*RRISKIVDGSNTDY Trigger: ATAGTCCGTGTTACTGCCATCAACGATCTTGGAAATTCTTCTTCACTTCCGCATACGTTCACGTTCTTGGACATAGTGATCCCTCTTCCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018485.4 |
||
| CDS GCA 90 bp | GATCTTCTCCTCCAGAATGGGATACTTCTTTACCCAAGTGCTGTTTaGTGGATCTGGAATGGTTCTGCTATACCATTGAGGTTTGAGAGT | + |
|
Preference number: 5 (lower is better) Translates to: DLLLQNGILLYPSAV*WIWNGSAIPLRFES Trigger: ACTCTCAAACCTCAATGGTATAGCAGAACCATTCCAGATCCAGCAAACAGCACTTGGGTAAAGAAGTATCCCATTCTGGAGGAGAAGATC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018485.4 ENSMUST00000117441.8 |
||
| CDS-3UTR CAA 90 bp | CTATCTTGGGGTCCTTTCTATATGATATCAGTGTTGGTGTATTGCCACCTTATCAAGGAGCAGGAAATATaGGCAGCTGACCCAAGAGGA | + |
|
Preference number: 5 (lower is better) Translates to: LSWGPFYMISVLVYCHLIKEQEI*AADPRG Trigger: TCCTCTTGGGTCAGCTGCCAATATTTCCTGCTCCTT...GATAAGGTGGCAATACACCAACACTGATATCATATAGAAAGGACCCCAAGATAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018485.4 |
||
| CDS-3UTR CAA 90 bp | ATCTTGGGGTCCTTTCTATATGATATCAGTGTTGGTGTATTGCCACCTTATCCATTGATTGAGTACCACTaGCCCCTCATCTTCCCACTG | + |
|
Preference number: 5 (lower is better) Translates to: ILGSFLYDISVGVLPPYPLIEYH*PLIFPL Trigger: CAGTGGGAAGATGAGGGGCAAGTGGTACTCAATCAA...TGGATAAGGTGGCAATACACCAACACTGATATCATATAGAAAGGACCCCAAGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018485.4 |
||
| CDS-3UTR CAA 90 bp | AGTACCTATGGTGAAGCTAATTTTATCCAGAGACAGCTGGCTTGTCTTCACTGTTTACCCAAGTGCTGTTaGCTGGATCTGGAATGGTTC | + |
|
Preference number: 5 (lower is better) Translates to: STYGEANFIQRQLACLHCLPKCC*LDLEWF Trigger: GAACCATTCCAGATCCAGCAAACAGCACTTGGGTAA...ACAGTGAAGACAAGCCAGCTGTCTCTGGATAAAATTAGCTTCACCATAGGTACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018485.4 ENSMUST00000117441.8 |
||
| CDS-3UTR CAA 90 bp | TGGCTTGTCTTCACTGTCACAGACCTTTGGAGTAGGAACTGGGCAGATAAAATGCTGCTTTCTAGCACCTaGTATAGGTTCACTAGTTGT | + |
|
Preference number: 5 (lower is better) Translates to: WLVFTVTDLWSRNWADKMLLSST*YRFTSC Trigger: ACAACTAGTGAACCTATACAAGGTGCTAGAAAGCAG...CATTTTATCTGCCCAGTTCCTACTCCAAAGGTCTGTGACAGTGAAGACAAGCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018485.4 ENSMUST00000117441.8 |
||
| CDS-3UTR CAA 90 bp | CTATCTTGGGGTCCTTTCTATATGATATCAGTGTTGGTGTATTGCCACCTTATCTCAGGTTGGCCAGTTTaGAGTCAGGGTCTCTGCTTT | + |
|
Preference number: 5 (lower is better) Translates to: LSWGPFYMISVLVYCHLISGWPV*SQGLCF Trigger: AAAGCAGAGACCCTGACTCAAAACTGGCCAACCTGA...GATAAGGTGGCAATACACCAACACTGATATCATATAGAAAGGACCCCAAGATAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018485.4 ENSMUST00000117441.8 |
||
| CDS-3UTR CAA 90 bp | ACAGACCTTTGGAGTAGGAACTGGGCAGATAAAATGAGGTACGTTGGCTTTCTATGGTCATGGACTTTCTaGCCATGGAGATTTTCAACA | + |
|
Preference number: 5 (lower is better) Translates to: TDLWSRNWADKMRYVGFLWSWTF*PWRFST Trigger: TGTTGAAAATCTCCATGGCAAGAAAGTCCATGACCA...TAGAAAGCCAACGTACCTCATTTTATCTGCCCAGTTCCTACTCCAAAGGTCTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018485.4 |
||
| CDS-3UTR CAA 90 bp | CTATCTTGGGGTCCTTTCTATATGATATCAGTGTTGGTGTATTGCCACCTTATCGCTGTAGGCTGCTTATaGGATGTGAGTTTTGAGAGC | + |
|
Preference number: 5 (lower is better) Translates to: LSWGPFYMISVLVYCHLIAVGCL*DVSFES Trigger: GCTCTCAAAACTCACATCCAATAAGCAGCCTACAGC...GATAAGGTGGCAATACACCAACACTGATATCATATAGAAAGGACCCCAAGATAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018485.4 ENSMUST00000117441.8 |
||
| CDS-3UTR CAA 90 bp | ACAGACCTTTGGAGTAGGAACTGGGCAGATAAAATGAGGTACGTTGGCTTTCTAGAGAGTTCCTGTAGCTaGTGGATTGGCAATATACAT | + |
|
Preference number: 5 (lower is better) Translates to: TDLWSRNWADKMRYVGFLESSCS*WIGNIH Trigger: ATGTATATTGCCAATCCACAAGCTACAGGAACTCTC...TAGAAAGCCAACGTACCTCATTTTATCTGCCCAGTTCCTACTCCAAAGGTCTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018485.4 ENSMUST00000117441.8 |
||
| CDS-3UTR CAA 90 bp | ACAGACCTTTGGAGTAGGAACTGGGCAGATAAAATGAGGTACGTTGGCTTTCTACTGCTTTCTAGCACCTaGTATAGGTTCACTAGTTGT | + |
|
Preference number: 5 (lower is better) Translates to: TDLWSRNWADKMRYVGFLLLSST*YRFTSC Trigger: ACAACTAGTGAACCTATACAAGGTGCTAGAAAGCAG...TAGAAAGCCAACGTACCTCATTTTATCTGCCCAGTTCCTACTCCAAAGGTCTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018485.4 ENSMUST00000117441.8 |
||
| CDS-3UTR CAA 90 bp | TGGCTTGTCTTCACTGTCACAGACCTTTGGAGTAGGAACTGGGCAGATAAAATGGGAAAGAGAAATATGTaGATGCTCCAGGTCAAAAGA | + |
|
Preference number: 5 (lower is better) Translates to: WLVFTVTDLWSRNWADKMGKRNM*MLQVKR Trigger: TCTTTTGACCTGGAGCATCAACATATTTCTCTTTCC...CATTTTATCTGCCCAGTTCCTACTCCAAAGGTCTGTGACAGTGAAGACAAGCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018485.4 ENSMUST00000117441.8 |
||
| CDS-3UTR CAA 90 bp | AGCATGACTATCTTGGGGTCCTTTCTATATGATATCAGTGTTGGTGTATTGCCAGTGGGCGGAGAGAACTaGATGCAAAAATGGAAAGAG | + |
|
Preference number: 5 (lower is better) Translates to: SMTILGSFLYDISVGVLPVGGEN*MQKWKE Trigger: CTCTTTCCATTTTTGCATCAAGTTCTCTCCGCCCAC...TGGCAATACACCAACACTGATATCATATAGAAAGGACCCCAAGATAGTCATGCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000018485.4 ENSMUST00000117441.8 |
||
| CDS-3UTR CAA 90 bp | ACAGACCTTTGGAGTAGGAACTGGGCAGATAAAATGAGGTACGTTGGCTTTCTATTGCTACAGTTTAGCTaGCAGACAAACAAGGTCATA | + |
|
Preference number: 5 (lower is better) Translates to: TDLWSRNWADKMRYVGFLLLQFS*QTNKVI Trigger: TATGACCTTGTTTGTCTGCAAGCTAAACTGTAGCAA...TAGAAAGCCAACGTACCTCATTTTATCTGCCCAGTTCCTACTCCAAAGGTCTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018485.4 |
||
| CDS-3UTR CAA 90 bp | AAATCCATCAAGAGTACATCAATTCATGACATTGCTGGTGAATTGGCCCAAGAAGCTGTAGGCTGCTTATaGGATGTGAGTTTTGAGAGC | + |
|
Preference number: 5 (lower is better) Translates to: KSIKSTSIHDIAGELAQEAVGCL*DVSFES Trigger: GCTCTCAAAACTCACATCCAATAAGCAGCCTACAGC...TTCTTGGGCCAATTCACCAGCAATGTCATGAATTGATGTACTCTTGATGGATTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117441.8 |
||
| CDS-3UTR CAA 90 bp | CATAGAAAGTTTGGTAAACAAAGACAAGTTTATAGGACTGGGTTATATGGGCATACGAATGCTTTCCAGTaGGCTTTGCCCTGTGGACAA | + |
|
Preference number: 5 (lower is better) Translates to: HRKFGKQRQVYRTGLYGHTNAFQ*ALPCGQ Trigger: TTGTCCACAGGGCAAAGCCAACTGGAAAGCATTCGT...ATGCCCATATAACCCAGTCCTATAAACTTGTCTTTGTTTACCAAACTTTCTATG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117441.8 |
||
| CDS-3UTR CAA 90 bp | ATCTTGGGGTCCTTTCTATATGATATCAGTGTTGGTGTATTGCCACCTTATCCAAATATACATTGCATCTaGCTTGGAGGTAGAGTAGCC | + |
|
Preference number: 5 (lower is better) Translates to: ILGSFLYDISVGVLPPYPNIHCI*LGGRVA Trigger: GGCTACTCTACCTCCAAGCAAGATGCAATGTATATT...TGGATAAGGTGGCAATACACCAACACTGATATCATATAGAAAGGACCCCAAGAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018485.4 ENSMUST00000117441.8 |
||
| CDS-3UTR CAA 90 bp | AGAGAAAATCCATCAAGAGTACATCAATTCATGACATTGCTGGTGAATTGGCCCCCTGTAGCTTGTGGATaGGCAATATACATTGCATCT | + |
|
Preference number: 5 (lower is better) Translates to: RENPSRVHQFMTLLVNWPPVACG*AIYIAS Trigger: AGATGCAATGTATATTGCCAATCCACAAGCTACAGG...GGGCCAATTCACCAGCAATGTCATGAATTGATGTACTCTTGATGGATTTTCTCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000117441.8 |
||
| CDS-3UTR CAA 90 bp | CTATCTTGGGGTCCTTTCTATATGATATCAGTGTTGGTGTATTGCCACCTTATCGAGAGTTCCTGTAGCTaGTGGATTGGCAATATACAT | + |
|
Preference number: 5 (lower is better) Translates to: LSWGPFYMISVLVYCHLIESSCS*WIGNIH Trigger: ATGTATATTGCCAATCCACAAGCTACAGGAACTCTC...GATAAGGTGGCAATACACCAACACTGATATCATATAGAAAGGACCCCAAGATAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018485.4 ENSMUST00000117441.8 |
||
| CDS-3UTR CAA 90 bp | AAAACTGTCTTGAACCTTTCAAGTGGCACTGGACGTAATCAGTGGTATGATAGGGGAAAGAGAAATATGTaGATGCTCCAGGTCAAAAGA | + |
|
Preference number: 5 (lower is better) Translates to: KTVLNLSSGTGRNQWYDRGKRNM*MLQVKR Trigger: TCTTTTGACCTGGAGCATCAACATATTTCTCTTTCC...CCTATCATACCACTGATTACGTCCAGTGCCACTTGAAAGGTTCAAGACAGTTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000117441.8 |
||
| CDS-3UTR CAA 90 bp | AGCATGACTATCTTGGGGTCCTTTCTATATGATATCAGTGTTGGTGTATTGCCAAGGTCATATTTTCCTTaGGCATTTGTAGCATTGACC | + |
|
Preference number: 5 (lower is better) Translates to: SMTILGSFLYDISVGVLPRSYFP*AFVALT Trigger: GGTCAATGCTACAAATGCCAAAGGAAAATATGACCT...TGGCAATACACCAACACTGATATCATATAGAAAGGACCCCAAGATAGTCATGCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018485.4 |
||
| CDS GCA 72 bp | CTGGTGCTTTGTGCTTGGAGTCACCCCGGATGGAGCTaGACCCTCCTTGGCTCTCTGACAGTGCATGCACCC | + |
|
Preference number: 6 (lower is better) Translates to: LVLCAWSHPGWS*TLLGSLTVHAP Trigger: GGGTGCATGCACTGTCAGAGAGCCAAGGAGGGTGCAGCTCCATCCGGGGTGACTCCAAGCACAAAGCACCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018485.4 ENSMUST00000117441.8 |
||
| CDS CCA 72 bp | CCGCAGCCAGTGTGGGGGAAACTTCGTGATGCTCCCTaGTTGGAGAGCTCTCCATTCCACTATGTACTCCCG | + |
|
Preference number: 6 (lower is better) Translates to: PQPVWGKLRDAP*LESSPFHYVLP Trigger: CGGGAGTACATAGTGGAATGGAGAGCTCTCCAACCAGGGAGCATCACGAAGTTTCCCCCACACTGGCTGCGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000018485.4 ENSMUST00000117441.8 |
||
| CDS CAA 72 bp | CAGCCAGTGTGGGGGAAACTTCGTGATGCTCCCTGGTaGGAGAGCTCTCCATTCCACTATGTACTCCCGAAC | + |
|
Preference number: 6 (lower is better) Translates to: QPVWGKLRDAPW*ESSPFHYVLPN Trigger: GTTCGGGAGTACATAGTGGAATGGAGAGCTCTCCAACCAGGGAGCATCACGAAGTTTCCCCCACACTGGCTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000018485.4 ENSMUST00000117441.8 |
||
| CDS TCA 72 bp | TTGCTTGGGATTCAAGGAGCAGGAAATATTGGCAGCTaGCCCAAGAGGAATCACAGGGGCAGGCTGGACGGT | + |
|
Preference number: 6 (lower is better) Translates to: LLGIQGAGNIGS*PKRNHRGRLDG Trigger: ACCGTCCAGCCTGCCCCTGTGATTCCTCTTGGGTCAGCTGCCAATATTTCCTGCTCCTTGAATCCCAAGCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018485.4 |
||
| CDS TCA 72 bp | ATGTTGTCCATGTTCTCCGACTTTGCAGAGACCTGGTaGGGAGCCAGCAACCCAGTGCCACATAGGTCCACT | + |
|
Preference number: 6 (lower is better) Translates to: MLSMFSDFAETW*GASNPVPHRST Trigger: AGTGGACCTATGTGGCACTGGGTTGCTGGCTCCTCACCAGGTCTCTGCAAAGTCGGAGAACATGGACAACAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018485.4 ENSMUST00000117441.8 |
||
| CDS CCA 72 bp | AGCCAGTGTGGGGGAAACTTCGTGATGCTCCCTGGTTaGAGAGCTCTCCATTCCACTATGTACTCCCGAACA | + |
|
Preference number: 6 (lower is better) Translates to: SQCGGNFVMLPG*RALHSTMYSRT Trigger: TGTTCGGGAGTACATAGTGGAATGGAGAGCTCTCCAACCAGGGAGCATCACGAAGTTTCCCCCACACTGGCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000018485.4 ENSMUST00000117441.8 |
||
| CDS CCA 72 bp | TTTCTCTGTGATGGCAGTAATGTGAGGGCCACTCACTaGTGCTTTGTGCTTGGAGTCACCCCGGATGGAGCT | + |
|
Preference number: 6 (lower is better) Translates to: FLCDGSNVRATH*CFVLGVTPDGA Trigger: AGCTCCATCCGGGGTGACTCCAAGCACAAAGCACCAGTGAGTGGCCCTCACATTACTGCCATCACAGAGAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018485.4 ENSMUST00000117441.8 |
||
| CDS CAA 72 bp | GAACAGCCTTGCTTGGGATTCAAGGAGCAGGAAATATaGGCAGCTGACCCAAGAGGAATCACAGGGGCAGGC | + |
|
Preference number: 6 (lower is better) Translates to: EQPCLGFKEQEI*AADPRGITGAG Trigger: GCCTGCCCCTGTGATTCCTCTTGGGTCAGCTGCCAATATTTCCTGCTCCTTGAATCCCAAGCAAGGCTGTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018485.4 |
||
| CDS TCA 72 bp | GTCACCCCGGATGGAGCTGCACCCTCCTTGGCTCTCTaGCAGTGCATGCACCCTGATTTCATAACAGATATA | + |
|
Preference number: 6 (lower is better) Translates to: VTPDGAAPSLAL*QCMHPDFITDI Trigger: TATATCTGTTATGAAATCAGGGTGCATGCACTGTCAGAGAGCCAAGGAGGGTGCAGCTCCATCCGGGGTGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018485.4 ENSMUST00000117441.8 |
||
| CDS CCA 72 bp | AACAGCCTTGCTTGGGATTCAAGGAGCAGGAAATATTaGCAGCTGACCCAAGAGGAATCACAGGGGCAGGCT | + |
|
Preference number: 6 (lower is better) Translates to: NSLAWDSRSRKY*QLTQEESQGQA Trigger: AGCCTGCCCCTGTGATTCCTCTTGGGTCAGCTGCCAATATTTCCTGCTCCTTGAATCCCAAGCAAGGCTGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018485.4 |
||
| CDS CAA 90 bp | GGACGTGCTGTTAAGAGGCTGATATCTGAGTTGATTGAGTACCACTaGCCCCTCATCTTCCCACTGCAGTGTACCTCTGCTCCCAGAAGC | + |
|
Preference number: 6 (lower is better) Translates to: GRAVKRLISELIEYH*PLIFPLQCTSAPRS Trigger: GCTTCTGGGAGCAGAGGTACACTGCAGTGGGAAGATGAGGGGCAAGTGGTACTCAATCAACTCAGATATCAGCCTCTTAACAGCACGTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018485.4 |
||
| CDS TCA 72 bp | CCCAACAGGCTCTTCCTCTGGTGTTCGTGTTCTCAGTaGCTCACTCCAATTACTCCAACTTCCTCCAGAGAG | + |
|
Preference number: 6 (lower is better) Translates to: PNRLFLWCSCSQ*LTPITPTSSRE Trigger: CTCTCTGGAGGAAGTTGGAGTAATTGGAGTGAGTCACTGAGAACACGAACACCAGAGGAAGAGCCTGTTGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018485.4 |
||
| CDS CCA 72 bp | TCTGTAATGGAGGATGCAGCCCCTTTGCTCCGGGAATaGAATGTGGGTCCAGGAAATGAAAAGGCGTTCCTT | + |
|
Preference number: 6 (lower is better) Translates to: SVMEDAAPLLRE*NVGPGNEKAFL Trigger: AAGGAACGCCTTTTCATTTCCTGGACCCACATTCCATTCCCGGAGCAAAGGGGCTGCATCCTCCATTACAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018485.4 ENSMUST00000117441.8 |
||
| CDS CAA 72 bp | ATCACAGGGGCAGGCTGGACGGTCACAGTGCCAAGCTaGCACACATCTATATTTGCTTTAATCAGCAGCCAC | + |
|
Preference number: 6 (lower is better) Translates to: ITGAGWTVTVPS*HTSIFALISSH Trigger: GTGGCTGCTGATTAAAGCAAATATAGATGTGTGCAAGCTTGGCACTGTGACCGTCCAGCCTGCCCCTGTGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018485.4 |
||
| CDS TCA 72 bp | CGTCACCTGATAGTGGAGGATCTTCCCCCTTGCCTCTaGTGGATTCAGACTCTTCCAGAAAAGAGAGATCTG | + |
|
Preference number: 6 (lower is better) Translates to: RHLIVEDLPPCL*WIQTLPEKRDL Trigger: CAGATCTCTCTTTTCTGGAAGAGTCTGAATCCATCAGAGGCAAGGGGGAAGATCCTCCACTATCAGGTGACG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000018485.4 ENSMUST00000117441.8 |
||
| CDS TCA 72 bp | GAACGTGCCCACCGTGATGATAGCGATGCAAATGCTTaGTATCACGAATGCTTTCCAGTTGGCTTTGCCCTG | + |
|
Preference number: 6 (lower is better) Translates to: ERAHRDDSDANA*YHECFPVGFAL Trigger: CAGGGCAAAGCCAACTGGAAAGCATTCGTGATATCAAGCATTTGCATCGCTATCATCACGGTGGGCACGTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018485.4 ENSMUST00000117441.8 |
||
| CDS GCA 72 bp | TACTCCCGAACAGCAGAATCAGCTTTCTTAGGAGGCTaGCAGGTCACTAGAATGTTGTCCATGTTCTCCGAC | + |
|
Preference number: 6 (lower is better) Translates to: YSRTAESAFLGG*QVTRMLSMFSD Trigger: GTCGGAGAACATGGACAACATTCTAGTGACCTGGCAGCCTCCTAAGAAAGCTGATTCTGCTGTTCGGGAGTA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018485.4 ENSMUST00000117441.8 |
||
| CDS CCA 72 bp | GTGGGCCATGCCATCAGGAGATTATCCGTAGGTAGCTaGATCTTCTCCTCCAGAATGGGATACTTCTTTACC | + |
|
Preference number: 6 (lower is better) Translates to: VGHAIRRLSVGS*IFSSRMGYFFT Trigger: GGTAAAGAAGTATCCCATTCTGGAGGAGAAGATCCAGCTACCTACGGATAATCTCCTGATGGCATGGCCCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018485.4 ENSMUST00000117441.8 |
||
| CDS CAA 90 bp | TCTTCCCACTGCAGTGTACCTCTGCTCCCAGAAGCATTTAGAAAGTaGATTCTGATGTCCCACGGAGGAAGAGGGATCACTATGTCCAAG | + |
|
Preference number: 6 (lower is better) Translates to: SSHCSVPLLPEAFRK*ILMSHGGRGITMSK Trigger: CTTGGACATAGTGATCCCTCTTCCTCCGTGGGACATCAGAATCAACTTTCTAAATGCTTCTGGGAGCAGAGGTACACTGCAGTGGGAAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018485.4 |
||
| CDS CAA 90 bp | ATTGACCATGTTCCAGGACGTGCTGTTAAGAGGCTGATATCTGAGTaGATTGAGTACCACTTGCCCCTCATCTTCCCACTGCAGTGTACC | + |
|
Preference number: 6 (lower is better) Translates to: IDHVPGRAVKRLISE*IEYHLPLIFPLQCT Trigger: GGTACACTGCAGTGGGAAGATGAGGGGCAAGTGGTACTCAATCAACTCAGATATCAGCCTCTTAACAGCACGTCCTGGAACATGGTCAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018485.4 |
||
| CDS CAA 90 bp | CTGTCATCCATAGGACATATGTCACCCTGGGCTGTAGGCTGCTTATaGGATGTGAGTTTTGAGAGCGTCGGTACTGAATTTCGCAGAGCT | + |
|
Preference number: 6 (lower is better) Translates to: LSSIGHMSPWAVGCL*DVSFESVGTEFRRA Trigger: AGCTCTGCGAAATTCAGTACCGACGCTCTCAAAACTCACATCCAATAAGCAGCCTACAGCCCAGGGTGACATATGTCCTATGGATGACAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018485.4 ENSMUST00000117441.8 |
||
| CDS CAA 90 bp | GTCAGGTTGGCCAGTTTTGAGTCAGGGTCTCTGCTTTCTAGCACCTaGTATAGGTTCACTAGTTGTCTGGTCTCAGCTGTGAGAGTTCCT | + |
|
Preference number: 6 (lower is better) Translates to: VRLASFESGSLLSST*YRFTSCLVSAVRVP Trigger: AGGAACTCTCACAGCTGAGACCAGACAACTAGTGAACCTATACAAGGTGCTAGAAAGCAGAGACCCTGACTCAAAACTGGCCAACCTGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018485.4 ENSMUST00000117441.8 |
||
| CDS TCA 72 bp | TTAACCGATCTAGAGTCAGCCGCTCACCACCGAAGATaGGTGGGCGGAGAGAACTTGATGCAAAAATGGAAA | + |
|
Preference number: 6 (lower is better) Translates to: LTDLESAAHHRR*VGGENLMQKWK Trigger: TTTCCATTTTTGCATCAAGTTCTCTCCGCCCACTCATCTTCGGTGGTGAGCGGCTGACTCTAGATCGGTTAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000018485.4 ENSMUST00000117441.8 |
||
| CDS GCA 72 bp | TCATCCATAGGACATATGTCACCCTGGGCTGTAGGCTaGTTATTGGATGTGAGTTTTGAGAGCGTCGGTACT | + |
|
Preference number: 6 (lower is better) Translates to: SSIGHMSPWAVG*LLDVSFESVGT Trigger: AGTACCGACGCTCTCAAAACTCACATCCAATAAGCAGCCTACAGCCCAGGGTGACATATGTCCTATGGATGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018485.4 ENSMUST00000117441.8 |
||
| CDS CAA 72 bp | CTTGTAACGTCACCTGATAGTGGAGGATCTTCCCCCTaGCCTCTGATGGATTCAGACTCTTCCAGAAAAGAG | + |
|
Preference number: 6 (lower is better) Translates to: LVTSPDSGGSSP*PLMDSDSSRKE Trigger: CTCTTTTCTGGAAGAGTCTGAATCCATCAGAGGCAAGGGGGAAGATCCTCCACTATCAGGTGACGTTACAAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000018485.4 ENSMUST00000117441.8 |
||
| CDS CAA 72 bp | GCCAGTTTTGAGTCAGGGTCTCTGCTTTCTAGCACCTaGTATAGGTTCACTAGTTGTCTGGTCTCAGCTGTG | + |
|
Preference number: 6 (lower is better) Translates to: ASFESGSLLSST*YRFTSCLVSAV Trigger: CACAGCTGAGACCAGACAACTAGTGAACCTATACAAGGTGCTAGAAAGCAGAGACCCTGACTCAAAACTGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018485.4 ENSMUST00000117441.8 |
||
| CDS CAA 90 bp | TTGTCACCTCTTGTAACGTCACCTGATAGTGGAGGATCTTCCCCCTaGCCTCTGATGGATTCAGACTCTTCCAGAAAAGAGAGATCTGCT | + |
|
Preference number: 6 (lower is better) Translates to: LSPLVTSPDSGGSSP*PLMDSDSSRKERSA Trigger: AGCAGATCTCTCTTTTCTGGAAGAGTCTGAATCCATCAGAGGCAAGGGGGAAGATCCTCCACTATCAGGTGACGTTACAAGAGGTGACAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000018485.4 ENSMUST00000117441.8 |
||
| CDS TCA 72 bp | ATCTCCACCCCACATACTGGGACTGGTGGCTTCTTTTaGGAGTTGCTACAGTTTAGCTTGCAGACAAACAAG | + |
|
Preference number: 6 (lower is better) Translates to: ISTPHTGTGGFF*ELLQFSLQTNK Trigger: CTTGTTTGTCTGCAAGCTAAACTGTAGCAACTCTCAAAAGAAGCCACCAGTCCCAGTATGTGGGGTGGAGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018485.4 |
||
| CDS TCA 72 bp | GTTCCATTTTCTCCTTCCTGGACACATGATATGTTTTaGGGTGGCTCTGGAGCAACACCAACTGAGATCTCC | + |
|
Preference number: 6 (lower is better) Translates to: VPFSPSWTHDMF*GGSGATPTEIS Trigger: GGAGATCTCAGTTGGTGTTGCTCCAGAGCCACCTCAAAACATATCATGTGTCCAGGAAGGAGAAAATGGAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018485.4 |
||
| CDS TCA 72 bp | CCCACGGAGGAAGAGGGATCACTATGTCCAAGAACGTaGACGTATGCGGAAGTGAAGAAGAATTTCCAAGAT | + |
|
Preference number: 6 (lower is better) Translates to: PTEEEGSLCPRT*TYAEVKKNFQD Trigger: ATCTTGGAAATTCTTCTTCACTTCCGCATACGTTCACGTTCTTGGACATAGTGATCCCTCTTCCTCCGTGGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018485.4 |
||
| CDS TCA 72 bp | CCGCTCACCACCGAAGATGAGTGGGCGGAGAGAACTTaGTGCAAAAATGGAAAGAGAAATATGTTGATGCTC | + |
|
Preference number: 6 (lower is better) Translates to: PLTTEDEWAERT*CKNGKRNMLML Trigger: GAGCATCAACATATTTCTCTTTCCATTTTTGCATCAAGTTCTCTCCGCCCACTCATCTTCGGTGGTGAGCGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000018485.4 ENSMUST00000117441.8 |
||
| CDS GCA 72 bp | AGAGCGTCGGTACTGAATTTCGCAGAGCTCAGGTTGTaGTGTCGAGTCTCGTTCTTTCCAGTATATTCTGTA | + |
|
Preference number: 6 (lower is better) Translates to: RASVLNFAELRL*CRVSFFPVYSV Trigger: TACAGAATATACTGGAAAGAACGAGACTCGACAGCACAACCTGAGCTCTGCGAAATTCAGTACCGACGCTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018485.4 ENSMUST00000117441.8 |
||
| CDS CAA 72 bp | TTTCCAGTATATTCTGTAATGGAGGATGCAGCCCCTTaGCTCCGGGAATGGAATGTGGGTCCAGGAAATGAA | + |
|
Preference number: 6 (lower is better) Translates to: FPVYSVMEDAAP*LREWNVGPGNE Trigger: TTCATTTCCTGGACCCACATTCCATTCCCGGAGCAAAGGGGCTGCATCCTCCATTACAGAATATACTGGAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018485.4 ENSMUST00000117441.8 |
||
| CDS CAA 72 bp | TCCTGTAGCTTGTGGATTGGCAATATACATTGCATCTaGCTTGGAGGTAGAGTAGCCTTGGAATCCTTGGCC | + |
|
Preference number: 6 (lower is better) Translates to: SCSLWIGNIHCI*LGGRVALESLA Trigger: GGCCAAGGATTCCAAGGCTACTCTACCTCCAAGCAAGATGCAATGTATATTGCCAATCCACAAGCTACAGGA 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018485.4 ENSMUST00000117441.8 |
||
| CDS CAA 72 bp | CTGGTCTCAGCTGTGAGAGTTCCTGTAGCTTGTGGATaGGCAATATACATTGCATCTTGCTTGGAGGTAGAG | + |
|
Preference number: 6 (lower is better) Translates to: LVSAVRVPVACG*AIYIASCLEVE Trigger: CTCTACCTCCAAGCAAGATGCAATGTATATTGCCAATCCACAAGCTACAGGAACTCTCACAGCTGAGACCAG 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018485.4 ENSMUST00000117441.8 |
||
| CDS GCA 72 bp | CTCCAGAATGGGATACTTCTTTACCCAAGTGCTGTTTaGTGGATCTGGAATGGTTCTGCTATACCATTGAGG | + |
|
Preference number: 6 (lower is better) Translates to: LQNGILLYPSAV*WIWNGSAIPLR Trigger: CCTCAATGGTATAGCAGAACCATTCCAGATCCAGCAAACAGCACTTGGGTAAAGAAGTATCCCATTCTGGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018485.4 ENSMUST00000117441.8 |
||
| CDS GCA 72 bp | TCTTCTCCTCCAGAATGGGATACTTCTTTACCCAAGTaGTGTTTGCTGGATCTGGAATGGTTCTGCTATACC | + |
|
Preference number: 6 (lower is better) Translates to: SSPPEWDTSLPK*CLLDLEWFCYT Trigger: GGTATAGCAGAACCATTCCAGATCCAGCAAACAGCACTTGGGTAAAGAAGTATCCCATTCTGGAGGAGAAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018485.4 ENSMUST00000117441.8 |
||
| CDS GCA 72 bp | GAGAGTTCCTGTAGCTTGTGGATTGGCAATATACATTaGATCTTGCTTGGAGGTAGAGTAGCCTTGGAATCC | + |
|
Preference number: 6 (lower is better) Translates to: ESSCSLWIGNIH*ILLGGRVALES Trigger: GGATTCCAAGGCTACTCTACCTCCAAGCAAGATGCAATGTATATTGCCAATCCACAAGCTACAGGAACTCTC 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018485.4 ENSMUST00000117441.8 |
||
| CDS CAA 72 bp | GTAAACGGTCTCAGATCTCGCAGGTCATATTTTCCTTaGGCATTTGTAGCATTGACCATGTTCCAGGACGTG | + |
|
Preference number: 6 (lower is better) Translates to: VNGLRSRRSYFP*AFVALTMFQDV Trigger: CACGTCCTGGAACATGGTCAATGCTACAAATGCCAAAGGAAAATATGACCTGCGAGATCTGAGACCGTTTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018485.4 |
||
| CDS CAA 72 bp | ATAGGACATATGTCACCCTGGGCTGTAGGCTGCTTATaGGATGTGAGTTTTGAGAGCGTCGGTACTGAATTT | + |
|
Preference number: 6 (lower is better) Translates to: IGHMSPWAVGCL*DVSFESVGTEF Trigger: AAATTCAGTACCGACGCTCTCAAAACTCACATCCAATAAGCAGCCTACAGCCCAGGGTGACATATGTCCTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018485.4 ENSMUST00000117441.8 |
||
| CDS CAA 72 bp | CCTCCAGAATGGGATACTTCTTTACCCAAGTGCTGTTaGCTGGATCTGGAATGGTTCTGCTATACCATTGAG | + |
|
Preference number: 6 (lower is better) Translates to: PPEWDTSLPKCC*LDLEWFCYTIE Trigger: CTCAATGGTATAGCAGAACCATTCCAGATCCAGCAAACAGCACTTGGGTAAAGAAGTATCCCATTCTGGAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018485.4 ENSMUST00000117441.8 |
||
| CDS CAA 90 bp | TGTGAGAGTTCCTGTAGCTTGTGGATTGGCAATATACATTGCATCTaGCTTGGAGGTAGAGTAGCCTTGGAATCCTTGGCCTCTTTTGAA | + |
|
Preference number: 6 (lower is better) Translates to: CESSCSLWIGNIHCI*LGGRVALESLASFE Trigger: TTCAAAAGAGGCCAAGGATTCCAAGGCTACTCTACCTCCAAGCAAGATGCAATGTATATTGCCAATCCACAAGCTACAGGAACTCTCACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018485.4 ENSMUST00000117441.8 |
||
| CDS CCA 72 bp | GGGATACTTCTTTACCCAAGTGCTGTTTGCTGGATCTaGAATGGTTCTGCTATACCATTGAGGTTTGAGAGT | + |
|
Preference number: 6 (lower is better) Translates to: GILLYPSAVCWI*NGSAIPLRFES Trigger: ACTCTCAAACCTCAATGGTATAGCAGAACCATTCCAGATCCAGCAAACAGCACTTGGGTAAAGAAGTATCCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018485.4 ENSMUST00000117441.8 |
||
| CDS CAA 72 bp | TGCATCTTGCTTGGAGGTAGAGTAGCCTTGGAATCCTaGGCCTCTTTTGAAGTAATATGGTTGTCTGACAAC | + |
|
Preference number: 6 (lower is better) Translates to: CILLGGRVALES*ASFEVIWLSDN Trigger: GTTGTCAGACAACCATATTACTTCAAAAGAGGCCAAGGATTCCAAGGCTACTCTACCTCCAAGCAAGATGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018485.4 ENSMUST00000117441.8 |
||
| CDS TCA 72 bp | GATCACTATGTCCAAGAACGTGAACGTATGCGGAAGTaGAGAAGAATTTCCAAGATCGTTGATGGCAGTAAC | + |
|
Preference number: 6 (lower is better) Translates to: DHYVQERERMRK*RRISKIVDGSN Trigger: GTTACTGCCATCAACGATCTTGGAAATTCTTCTTCACTTCCGCATACGTTCACGTTCTTGGACATAGTGATC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018485.4 |
||
| CDS TCA 72 bp | CTGTTTGCTGGATCTGGAATGGTTCTGCTATACCATTaGGGTTTGAGAGTAGACAGGAGAGTAAATGCCTTT | + |
|
Preference number: 6 (lower is better) Translates to: LFAGSGMVLLYH*GLRVDRRVNAF Trigger: AAAGGCATTTACTCTCCTGTCTACTCTCAAACCTCAATGGTATAGCAGAACCATTCCAGATCCAGCAAACAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018485.4 ENSMUST00000117441.8 |
||
| CDS GCA 72 bp | AAATGCTTGATATCACGAATGCTTTCCAGTTGGCTTTaGCCTGTGGACAAAATTCCCTTTCATTTCCTTGGG | + |
|
Preference number: 6 (lower is better) Translates to: KCLISRMLSSWL*PVDKIPFHFLG Trigger: CCCAAGGAAATGAAAGGGAATTTTGTCCACAGGGCAAAGCCAACTGGAAAGCATTCGTGATATCAAGCATTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018485.4 ENSMUST00000117441.8 |
||
| CDS CCA 72 bp | CGATGCAAATGCTTGATATCACGAATGCTTTCCAGTTaGCTTTGCCCTGTGGACAAAATTCCCTTTCATTTC | + |
|
Preference number: 6 (lower is better) Translates to: RCKCLISRMLSS*LCPVDKIPFHF Trigger: GAAATGAAAGGGAATTTTGTCCACAGGGCAAAGCCAACTGGAAAGCATTCGTGATATCAAGCATTTGCATCG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018485.4 ENSMUST00000117441.8 |
||
| CDS CCA 72 bp | CAGAATGGGATACTTCTTTACCCAAGTGCTGTTTGCTaGATCTGGAATGGTTCTGCTATACCATTGAGGTTT | + |
|
Preference number: 6 (lower is better) Translates to: QNGILLYPSAVC*IWNGSAIPLRF Trigger: AAACCTCAATGGTATAGCAGAACCATTCCAGATCCAGCAAACAGCACTTGGGTAAAGAAGTATCCCATTCTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018485.4 ENSMUST00000117441.8 |
||
| CDS CAA 72 bp | AACGTATGCGGAAGTGAAGAAGAATTTCCAAGATCGTaGATGGCAGTAACACGGACTATGAACCTGGATTCA | + |
|
Preference number: 6 (lower is better) Translates to: NVCGSEEEFPRS*MAVTRTMNLDS Trigger: TGAATCCAGGTTCATAGTCCGTGTTACTGCCATCAACGATCTTGGAAATTCTTCTTCACTTCCGCATACGTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018485.4 |
||
| CDS CAA 90 bp | AAGAACGTGAACGTATGCGGAAGTGAAGAAGAATTTCCAAGATCGTaGATGGCAGTAACACGGACTATGAACCTGGATTCAGCTAAATCA | + |
|
Preference number: 6 (lower is better) Translates to: KNVNVCGSEEEFPRS*MAVTRTMNLDSAKS Trigger: TGATTTAGCTGAATCCAGGTTCATAGTCCGTGTTACTGCCATCAACGATCTTGGAAATTCTTCTTCACTTCCGCATACGTTCACGTTCTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018485.4 |
||
| CDS CAA 90 bp | TCATATTCTGTAAACGGTCTCAGATCTCGCAGGTCATATTTTCCTTaGGCATTTGTAGCATTGACCATGTTCCAGGACGTGCTGTTAAGA | + |
|
Preference number: 6 (lower is better) Translates to: SYSVNGLRSRRSYFP*AFVALTMFQDVLLR Trigger: TCTTAACAGCACGTCCTGGAACATGGTCAATGCTACAAATGCCAAAGGAAAATATGACCTGCGAGATCTGAGACCGTTTACAGAATATGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018485.4 |
||
| CDS CAA 90 bp | AAATGGAAAGAGAAATATGTTGATGCTCCAGGTCAAAAGAATCAGTaGGGTCAGCCTCATGTGGTGACAGATCTTCTATGTTGGAGGGTA | + |
|
Preference number: 6 (lower is better) Translates to: KWKEKYVDAPGQKNQ*GQPHVVTDLLCWRV Trigger: TACCCTCCAACATAGAAGATCTGTCACCACATGAGGCTGACCCAACTGATTCTTTTGACCTGGAGCATCAACATATTTCTCTTTCCATTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018485.4 ENSMUST00000117441.8 |
||
| CDS CAA 90 bp | AATATACATTGCATCTTGCTTGGAGGTAGAGTAGCCTTGGAATCCTaGGCCTCTTTTGAAGTAATATGGTTGTCTGACAACTGGGATCAT | + |
|
Preference number: 6 (lower is better) Translates to: NIHCILLGGRVALES*ASFEVIWLSDNWDH Trigger: ATGATCCCAGTTGTCAGACAACCATATTACTTCAAAAGAGGCCAAGGATTCCAAGGCTACTCTACCTCCAAGCAAGATGCAATGTATATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018485.4 ENSMUST00000117441.8 |
||