Pregenerated sensors for IL12A (Mus musculus)
Ensembl gene IDs: ENSMUSG00000027776Ensembl transcript IDs: ENSMUST00000029345.12, ENSMUST00000107816.4
Found 30 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TGTGCCACCTTTGGGGAGATGAGATGTGATGGGAGAACAGATTCCTaGAGGAGCTTAAGGCCCACCAGGCCAAGACCACCTGACTCTTAT | + |
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Preference number: 1 (lower is better) Translates to: CATFGEMRCDGRTDS*RSLRPTRPRPPDSY Trigger: ATAAGAGTCAGGTGGTCTTGGCCTGGTGGGCCTTAAGCTCCTTCAGGAATCTGTTCTCCCATCACATCTCATCTCCCCAAAGGTGGCACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029345.12 ENSMUST00000107816.4 |
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| 3UTR-3UTR TCA 90 bp | ACACTTTGGCACAAAAACAATAGCTTATCAGTTCTTGCTCTTCTGCTAACACATTGGGGAGATGAGATGTaGTGGGAGAACAGATTCCTG | + |
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Preference number: 2 (lower is better) Translates to: TLWHKNNSLSVLALLLTHWGDEM*WENRFL Trigger: CAGGAATCTGTTCTCCCATCACATCTCATCTCCCCA...ATGTGTTAGCAGAAGAGCAAGAACTGATAAGCTATTGTTTTTGTGCCAAAGTGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000029345.12 ENSMUST00000107816.4 |
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| 3UTR TCA 72 bp | GACCATGCTGAGGTAGCTGTGCCACCTTTGGGGAGATaGGATGTGATGGGAGAACAGATTCCTGAAGGAGCT | + |
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Preference number: 3 (lower is better) Translates to: DHAEVAVPPLGR*DVMGEQIPEGA Trigger: AGCTCCTTCAGGAATCTGTTCTCCCATCACATCTCATCTCCCCAAAGGTGGCACAGCTACCTCAGCATGGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029345.12 ENSMUST00000107816.4 |
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| CDS-3UTR CCA 90 bp | AGGAGCTTAAGGCCCACCAGGCCAAGACCACCTGACTCTTATGAATCTTTCTTTCAAAGACGTCTTCTGTaGGGGCAGGCAGCTCCCTCT | + |
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Preference number: 4 (lower is better) Translates to: RSLRPTRPRPPDSYESFFQRRLL*GQAAPS Trigger: AGAGGGAGCTGCCTGCCCCCACAGAAGACGTCTTTG...AAAGAAAGATTCATAAGAGTCAGGTGGTCTTGGCCTGGTGGGCCTTAAGCTCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029345.12 ENSMUST00000107816.4 |
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| CDS-3UTR CCA 90 bp | TTAAGGCCCACCAGGCCAAGACCACCTGACTCTTATGAATCTTTCTTTGTTTCCCAAAGACGTCTTCTGTaGGGGCAGGCAGCTCCCTCT | + |
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Preference number: 4 (lower is better) Translates to: LRPTRPRPPDSYESFFVSQRRLL*GQAAPS Trigger: AGAGGGAGCTGCCTGCCCCCACAGAAGACGTCTTTG...GGAAACAAAGAAAGATTCATAAGAGTCAGGTGGTCTTGGCCTGGTGGGCCTTAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029345.12 ENSMUST00000107816.4 |
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| 3UTR CAA 72 bp | CCAGGCCAAGACCACCTGACTCTTATGAATCTTTCTTaGTTTCCTATCTGTGTGAGGAGGGCGCTGTGGCAG | + |
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Preference number: 4 (lower is better) Translates to: PGQDHLTLMNLS*FPICVRRALWQ Trigger: CTGCCACAGCGCCCTCCTCACACAGATAGGAAACAAAGAAAGATTCATAAGAGTCAGGTGGTCTTGGCCTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029345.12 ENSMUST00000107816.4 |
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| CDS-3UTR CCA 90 bp | TTAAGGCCCACCAGGCCAAGACCACCTGACTCTTATGAATCTTTCTTTGTTTCCCTGGCCAAACTGAGGTaGTTTAGGAGGGCAAGGGTG | + |
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Preference number: 4 (lower is better) Translates to: LRPTRPRPPDSYESFFVSLAKLR*FRRARV Trigger: CACCCTTGCCCTCCTAAACCACCTCAGTTTGGCCAG...GGAAACAAAGAAAGATTCATAAGAGTCAGGTGGTCTTGGCCTGGTGGGCCTTAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029345.12 ENSMUST00000107816.4 |
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| CDS-3UTR GCA 90 bp | AGGAGCTTAAGGCCCACCAGGCCAAGACCACCTGACTCTTATGAATCTTTCTTTGTTGTGATTCTGAAGTaGTGCGTTGATGGCCTGGAA | + |
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Preference number: 4 (lower is better) Translates to: RSLRPTRPRPPDSYESFFVVILK*CVDGLE Trigger: TTCCAGGCCATCAACGCAGCACTTCAGAATCACAAC...AAAGAAAGATTCATAAGAGTCAGGTGGTCTTGGCCTGGTGGGCCTTAAGCTCCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029345.12 ENSMUST00000107816.4 |
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| CDS-3UTR TCA 90 bp | AGGAGCTTAAGGCCCACCAGGCCAAGACCACCTGACTCTTATGAATCTTTCTTTTGCCCTTGTCTAGAATaGTCTGCTGATGGTTGTGAT | + |
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Preference number: 4 (lower is better) Translates to: RSLRPTRPRPPDSYESFFCPCLE*SADGCD Trigger: ATCACAACCATCAGCAGATCATTCTAGACAAGGGCA...AAAGAAAGATTCATAAGAGTCAGGTGGTCTTGGCCTGGTGGGCCTTAAGCTCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029345.12 ENSMUST00000107816.4 |
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| CDS-3UTR GCA 90 bp | TTAAGGCCCACCAGGCCAAGACCACCTGACTCTTATGAATCTTTCTTTGTTTCCGTTGTGATTCTGAAGTaGTGCGTTGATGGCCTGGAA | + |
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Preference number: 4 (lower is better) Translates to: LRPTRPRPPDSYESFFVSVVILK*CVDGLE Trigger: TTCCAGGCCATCAACGCAGCACTTCAGAATCACAAC...GGAAACAAAGAAAGATTCATAAGAGTCAGGTGGTCTTGGCCTGGTGGGCCTTAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029345.12 ENSMUST00000107816.4 |
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| CDS-3UTR TCA 90 bp | TTAAGGCCCACCAGGCCAAGACCACCTGACTCTTATGAATCTTTCTTTGTTTCCTGCCCTTGTCTAGAATaGTCTGCTGATGGTTGTGAT | + |
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Preference number: 4 (lower is better) Translates to: LRPTRPRPPDSYESFFVSCPCLE*SADGCD Trigger: ATCACAACCATCAGCAGATCATTCTAGACAAGGGCA...GGAAACAAAGAAAGATTCATAAGAGTCAGGTGGTCTTGGCCTGGTGGGCCTTAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029345.12 ENSMUST00000107816.4 |
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| CDS-3UTR CCA 90 bp | ACACTTTGGCACAAAAACAATAGCTTATCAGTTCTTGCTCTTCTGCTAACACATCTGGCCAAACTGAGGTaGTTTAGGAGGGCAAGGGTG | + |
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Preference number: 4 (lower is better) Translates to: TLWHKNNSLSVLALLLTHLAKLR*FRRARV Trigger: CACCCTTGCCCTCCTAAACCACCTCAGTTTGGCCAG...ATGTGTTAGCAGAAGAGCAAGAACTGATAAGCTATTGTTTTTGTGCCAAAGTGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029345.12 ENSMUST00000107816.4 |
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| CDS-3UTR CCA 90 bp | ACACTTTGGCACAAAAACAATAGCTTATCAGTTCTTGCTCTTCTGCTAACACATGCATCAGCTCATCGATaGCCACCAGCATGCCCTTGT | + |
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Preference number: 4 (lower is better) Translates to: TLWHKNNSLSVLALLLTHASAHR*PPACPC Trigger: ACAAGGGCATGCTGGTGGCCATCGATGAGCTGATGC...ATGTGTTAGCAGAAGAGCAAGAACTGATAAGCTATTGTTTTTGTGCCAAAGTGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029345.12 ENSMUST00000107816.4 |
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| CDS-3UTR GCA 90 bp | ACACTTTGGCACAAAAACAATAGCTTATCAGTTCTTGCTCTTCTGCTAACACATTCAAGTCCTCATAGATaGTACCAAGGCACAGGGTCA | + |
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Preference number: 4 (lower is better) Translates to: TLWHKNNSLSVLALLLTHSSPHR*YQGTGS Trigger: TGACCCTGTGCCTTGGTAGCATCTATGAGGACTTGA...ATGTGTTAGCAGAAGAGCAAGAACTGATAAGCTATTGTTTTTGTGCCAAAGTGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029345.12 ENSMUST00000107816.4 |
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| CDS-3UTR GCA 90 bp | ACACTTTGGCACAAAAACAATAGCTTATCAGTTCTTGCTCTTCTGCTAACACATAGGCGTGAAGCAGGATaGAGAGCTTCATTTTCACTC | + |
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Preference number: 4 (lower is better) Translates to: TLWHKNNSLSVLALLLTHRREAG*RASFSL Trigger: GAGTGAAAATGAAGCTCTGCATCCTGCTTCACGCCT...ATGTGTTAGCAGAAGAGCAAGAACTGATAAGCTATTGTTTTTGTGCCAAAGTGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000029345.12 ENSMUST00000107816.4 |
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| CDS-3UTR CCA 90 bp | ACACTTTGGCACAAAAACAATAGCTTATCAGTTCTTGCTCTTCTGCTAACACATGCCTGGAACTCTGTCTaGTACATCTTCAAGTCCTCA | + |
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Preference number: 4 (lower is better) Translates to: TLWHKNNSLSVLALLLTHAWNSV*YIFKSS Trigger: TGAGGACTTGAAGATGTACCAGACAGAGTTCCAGGC...ATGTGTTAGCAGAAGAGCAAGAACTGATAAGCTATTGTTTTTGTGCCAAAGTGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029345.12 ENSMUST00000107816.4 |
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| CDS CCA 90 bp | GCCGTCTTCACCATGTCATCTGTGGTCTTCAGCAGGTTTCGGGACTaGCTAAGACACCTGGCAGGTCCAGAGACTGGAATGACCCTGGCC | + |
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Preference number: 5 (lower is better) Translates to: AVFTMSSVVFSRFRD*LRHLAGPETGMTLA Trigger: GGCCAGGGTCATTCCAGTCTCTGGACCTGCCAGGTGTCTTAGCCAGTCCCGAAACCTGCTGAAGACCACAGATGACATGGTGAAGACGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029345.12 ENSMUST00000107816.4 |
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| CDS TCA 90 bp | TCTGCTTCTCCCACAGGAGGTTTCTGGCGCAGAGTCTCGCCATTATaGTTCAGAGACTGCATCAGCTCATCGATGGCCACCAGCATGCCC | + |
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Preference number: 5 (lower is better) Translates to: SASPTGGFWRRVSPL*FRDCISSSMATSMP Trigger: GGGCATGCTGGTGGCCATCGATGAGCTGATGCAGTCTCTGAATCATAATGGCGAGACTCTGCGCCAGAAACCTCCTGTGGGAGAAGCAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029345.12 ENSMUST00000107816.4 |
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| CDS-3UTR CAA 90 bp | TTAAGGCCCACCAGGCCAAGACCACCTGACTCTTATGAATCTTTCTTTGTTTCCGCAGGCAGCTCCCTCTaGTTGTGGAAGAAGTCTCTC | + |
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Preference number: 5 (lower is better) Translates to: LRPTRPRPPDSYESFFVSAGSSL*LWKKSL Trigger: GAGAGACTTCTTCCACAACAAGAGGGAGCTGCCTGC...GGAAACAAAGAAAGATTCATAAGAGTCAGGTGGTCTTGGCCTGGTGGGCCTTAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029345.12 ENSMUST00000107816.4 |
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| CDS TCA 90 bp | GTTCCAGTGGTAAACAGGTCTTCAATGTGCTGGTTTGGTCCCGTGTaGTGTCTTCATGATCGATGTCTTCAGCAGTGCAGGAATAATGTT | + |
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Preference number: 5 (lower is better) Translates to: VPVVNRSSMCWFGPV*CLHDRCLQQCRNNV Trigger: AACATTATTCCTGCACTGCTGAAGACATCGATCATGAAGACATCACACGGGACCAAACCAGCACATTGAAGACCTGTTTACCACTGGAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029345.12 ENSMUST00000107816.4 |
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| CDS-3UTR CAA 90 bp | ACACTTTGGCACAAAAACAATAGCTTATCAGTTCTTGCTCTTCTGCTAACACATGCAGGCAGCTCCCTCTaGTTGTGGAAGAAGTCTCTC | + |
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Preference number: 5 (lower is better) Translates to: TLWHKNNSLSVLALLLTHAGSSL*LWKKSL Trigger: GAGAGACTTCTTCCACAACAAGAGGGAGCTGCCTGC...ATGTGTTAGCAGAAGAGCAAGAACTGATAAGCTATTGTTTTTGTGCCAAAGTGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029345.12 ENSMUST00000107816.4 |
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| CDS GCA 72 bp | GGGTGGCCAAAAAGAGGAGGTAGCGTGATTGACACATaGTGGACCGGCACTGAGAGGAGCTGCTGGATGCCG | + |
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Preference number: 6 (lower is better) Translates to: GWPKRGGSVIDT*WTGTERSCWMP Trigger: CGGCATCCAGCAGCTCCTCTCAGTGCCGGTCCAGCATGTGTCAATCACGCTACCTCCTCTTTTTGGCCACCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029345.12 |
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| CDS CCA 72 bp | TGGCCAAAAAGAGGAGGTAGCGTGATTGACACATGCTaGACCGGCACTGAGAGGAGCTGCTGGATGCCGAGG | + |
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Preference number: 6 (lower is better) Translates to: WPKRGGSVIDTC*TGTERSCWMPR Trigger: CCTCGGCATCCAGCAGCTCCTCTCAGTGCCGGTCCAGCATGTGTCAATCACGCTACCTCCTCTTTTTGGCCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029345.12 |
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| CDS CCA 72 bp | GGTCCAGAGACTGGAATGACCCTGGCCAAACTGAGGTaGTTTAGGAGGGCAAGGGTGGCCAAAAAGAGGAGG | + |
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Preference number: 6 (lower is better) Translates to: GPETGMTLAKLR*FRRARVAKKRR Trigger: CCTCCTCTTTTTGGCCACCCTTGCCCTCCTAAACCACCTCAGTTTGGCCAGGGTCATTCCAGTCTCTGGACC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029345.12 ENSMUST00000107816.4 |
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| CDS TCA 72 bp | CCCACAGGAGGTTTCTGGCGCAGAGTCTCGCCATTATaGTTCAGAGACTGCATCAGCTCATCGATGGCCACC | + |
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Preference number: 6 (lower is better) Translates to: PTGGFWRRVSPL*FRDCISSSMAT Trigger: GGTGGCCATCGATGAGCTGATGCAGTCTCTGAATCATAATGGCGAGACTCTGCGCCAGAAACCTCCTGTGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029345.12 ENSMUST00000107816.4 |
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| CDS CCA 72 bp | ACCAAGGCACAGGGTCATCATCAAAGACGTCTTCTGTaGGGGCAGGCAGCTCCCTCTTGTTGTGGAAGAAGT | + |
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Preference number: 6 (lower is better) Translates to: TKAQGHHQRRLL*GQAAPSCCGRS Trigger: ACTTCTTCCACAACAAGAGGGAGCTGCCTGCCCCCACAGAAGACGTCTTTGATGATGACCCTGTGCCTTGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029345.12 ENSMUST00000107816.4 |
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| CDS GCA 72 bp | CAGGATGCAGAGCTTCATTTTCACTCTGTAAGGGTCTaGTTCTCCCACAGGAGGTTTCTGGCGCAGAGTCTC | + |
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Preference number: 6 (lower is better) Translates to: QDAELHFHSVRV*FSHRRFLAQSL Trigger: GAGACTCTGCGCCAGAAACCTCCTGTGGGAGAAGCAGACCCTTACAGAGTGAAAATGAAGCTCTGCATCCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029345.12 ENSMUST00000107816.4 |
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| CDS TCA 72 bp | GTAAACAGGTCTTCAATGTGCTGGTTTGGTCCCGTGTaGTGTCTTCATGATCGATGTCTTCAGCAGTGCAGG | + |
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Preference number: 6 (lower is better) Translates to: VNRSSMCWFGPV*CLHDRCLQQCR Trigger: CCTGCACTGCTGAAGACATCGATCATGAAGACATCACACGGGACCAAACCAGCACATTGAAGACCTGTTTAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029345.12 ENSMUST00000107816.4 |
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| CDS GCA 72 bp | GGAACTCTGTCTGGTACATCTTCAAGTCCTCATAGATaGTACCAAGGCACAGGGTCATCATCAAAGACGTCT | + |
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Preference number: 6 (lower is better) Translates to: GTLSGTSSSPHR*YQGTGSSSKTS Trigger: AGACGTCTTTGATGATGACCCTGTGCCTTGGTAGCATCTATGAGGACTTGAAGATGTACCAGACAGAGTTCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029345.12 ENSMUST00000107816.4 |
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| CDS CCA 72 bp | CTTCAGCAGTGCAGGAATAATGTTTCAGTTTTTCTCTaGCCGTCTTCACCATGTCATCTGTGGTCTTCAGCA | + |
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Preference number: 6 (lower is better) Translates to: LQQCRNNVSVFL*PSSPCHLWSSA Trigger: TGCTGAAGACCACAGATGACATGGTGAAGACGGCCAGAGAAAAACTGAAACATTATTCCTGCACTGCTGAAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029345.12 ENSMUST00000107816.4 |
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