Pregenerated sensors for IL11RA1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000073889Ensembl transcript IDs: ENSMUST00000098132.11, ENSMUST00000108040.8, ENSMUST00000108041.8, ENSMUST00000108042.3
Found 182 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
---|---|---|
3UTR CCA 90 bp | CACACACGATCACAGGAACACAGACTTCTGTACACATTCCTCAGGTaGACTTCCACCTCAGGACATCGGAAGTCCAGACAGCCTTCAGCC | + |
Preference number: 1 (lower is better) Translates to: HTRSQEHRLLYTFLR*TSTSGHRKSRQPSA Trigger: GGCTGAAGGCTGTCTGGACTTCCGATGTCCTGAGGTGGAAGTCCACCTGAGGAATGTGTACAGAAGTCTGTGTTCCTGTGATCGTGTGTG 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000098132.11 ENSMUST00000108040.8 ENSMUST00000108041.8 ENSMUST00000108042.3 |
||
3UTR GCA 90 bp | GCCAAGCCCAAGACCGCACACACTCTCCAATCATCTGTACACACATaGAGAGAACTTTTGCTCCCTGTCTCACATACACACACGATCACA | + |
Preference number: 1 (lower is better) Translates to: AKPKTAHTLQSSVHT*RELLLPVSHTHTIT Trigger: TGTGATCGTGTGTGTATGTGAGACAGGGAGCAAAAGTTCTCTGCATGTGTGTACAGATGATTGGAGAGTGTGTGCGGTCTTGGGCTTGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000098132.11 ENSMUST00000108040.8 ENSMUST00000108041.8 ENSMUST00000108042.3 |
||
3UTR CCA 90 bp | CTCAGGACATCGGAAGTCCAGACAGCCTTCAGCCGGCAGCAAGTTTaGAGTATAGGTGTCAAAGAAAAGAGCTCAGACTTTCAGCTGAGA | + |
Preference number: 1 (lower is better) Translates to: LRTSEVQTAFSRQQV*SIGVKEKSSDFQLR Trigger: TCTCAGCTGAAAGTCTGAGCTCTTTTCTTTGACACCTATACTCCAAACTTGCTGCCGGCTGAAGGCTGTCTGGACTTCCGATGTCCTGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000098132.11 ENSMUST00000108040.8 ENSMUST00000108041.8 ENSMUST00000108042.3 |
||
3UTR CAA 90 bp | CCTCAGGACATCGGAAGTCCAGACAGCCTTCAGCCGGCAGCAAGTTaGGAGTATAGGTGTCAAAGAAAAGAGCTCAGACTTTCAGCTGAG | + |
Preference number: 2 (lower is better) Translates to: PQDIGSPDSLQPAAS*EYRCQRKELRLSAE Trigger: CTCAGCTGAAAGTCTGAGCTCTTTTCTTTGACACCTATACTCCAAACTTGCTGCCGGCTGAAGGCTGTCTGGACTTCCGATGTCCTGAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000098132.11 ENSMUST00000108040.8 ENSMUST00000108041.8 ENSMUST00000108042.3 |
||
3UTR CCA 72 bp | TCACAGGAACACAGACTTCTGTACACATTCCTCAGGTaGACTTCCACCTCAGGACATCGGAAGTCCAGACAG | + |
Preference number: 3 (lower is better) Translates to: SQEHRLLYTFLR*TSTSGHRKSRQ Trigger: CTGTCTGGACTTCCGATGTCCTGAGGTGGAAGTCCACCTGAGGAATGTGTACAGAAGTCTGTGTTCCTGTGA 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000098132.11 ENSMUST00000108040.8 ENSMUST00000108041.8 ENSMUST00000108042.3 |
||
3UTR CCA 72 bp | TCGGAAGTCCAGACAGCCTTCAGCCGGCAGCAAGTTTaGAGTATAGGTGTCAAAGAAAAGAGCTCAGACTTT | + |
Preference number: 3 (lower is better) Translates to: SEVQTAFSRQQV*SIGVKEKSSDF Trigger: AAAGTCTGAGCTCTTTTCTTTGACACCTATACTCCAAACTTGCTGCCGGCTGAAGGCTGTCTGGACTTCCGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000098132.11 ENSMUST00000108040.8 ENSMUST00000108041.8 ENSMUST00000108042.3 |
||
3UTR GCA 72 bp | AAGACCGCACACACTCTCCAATCATCTGTACACACATaGAGAGAACTTTTGCTCCCTGTCTCACATACACAC | + |
Preference number: 3 (lower is better) Translates to: KTAHTLQSSVHT*RELLLPVSHTH Trigger: GTGTGTATGTGAGACAGGGAGCAAAAGTTCTCTGCATGTGTGTACAGATGATTGGAGAGTGTGTGCGGTCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000098132.11 ENSMUST00000108040.8 ENSMUST00000108041.8 ENSMUST00000108042.3 |
||
3UTR GCA 72 bp | CTCTCCAATCATCTGTACACACATGCAGAGAACTTTTaGTCCCTGTCTCACATACACACACGATCACAGGAA | + |
Preference number: 3 (lower is better) Translates to: LSNHLYTHAENF*SLSHIHTRSQE Trigger: TTCCTGTGATCGTGTGTGTATGTGAGACAGGGAGCAAAAGTTCTCTGCATGTGTGTACAGATGATTGGAGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000098132.11 ENSMUST00000108040.8 ENSMUST00000108041.8 ENSMUST00000108042.3 |
||
CDS-3UTR CCA 90 bp | GAGCTCAGACTTTCAGCTGAGACCTCCATCCACAGGGATCCACTGCCCCGCCTCCGGCCACCAGGACCCTaGTCAGCCCTGAGCAGCTGC | + |
Preference number: 4 (lower is better) Translates to: ELRLSAETSIHRDPLPRLRPPGP*SALSSC Trigger: GCAGCTGCTCAGGGCTGACCAGGGTCCTGGTGGCCG...GAGGCGGGGCAGTGGATCCCTGTGGATGGAGGTCTCAGCTGAAAGTCTGAGCTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000098132.11 ENSMUST00000108040.8 ENSMUST00000108041.8 ENSMUST00000108042.3 |
||
CDS-3UTR CCA 90 bp | GTGGACTTCCACCTCAGGACATCGGAAGTCCAGACAGCCTTCAGCCGGCAGCAACGGCCACCAGGACCCTaGTCAGCCCTGAGCAGCTGC | + |
Preference number: 4 (lower is better) Translates to: VDFHLRTSEVQTAFSRQQRPPGP*SALSSC Trigger: GCAGCTGCTCAGGGCTGACCAGGGTCCTGGTGGCCG...TTGCTGCCGGCTGAAGGCTGTCTGGACTTCCGATGTCCTGAGGTGGAAGTCCAC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000098132.11 ENSMUST00000108040.8 ENSMUST00000108041.8 ENSMUST00000108042.3 |
||
CDS-3UTR CCA 90 bp | GACTTTCAGCTGAGACCTCCATCCACAGGGATCCACTGCCCCGCCTCTTTCTGCAGTACCCCAGGCCTCTaGGCTCCAGGCGCTCCAGGT | + |
Preference number: 4 (lower is better) Translates to: DFQLRPPSTGIHCPASFCSTPGL*APGAPG Trigger: ACCTGGAGCGCCTGGAGCCCAGAGGCCTGGGGTACT...GCAGAAAGAGGCGGGGCAGTGGATCCCTGTGGATGGAGGTCTCAGCTGAAAGTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000098132.11 ENSMUST00000108040.8 ENSMUST00000108041.8 ENSMUST00000108042.3 |
||
CDS-3UTR GCA 90 bp | CTCAGGTGGACTTCCACCTCAGGACATCGGAAGTCCAGACAGCCTTCAGCCGGCTCCAGGCGCTCCAGGTaGCAGCATCCAGAAAGTCCC | + |
Preference number: 4 (lower is better) Translates to: LRWTSTSGHRKSRQPSAGSRRSR*QHPESP Trigger: GGGACTTTCTGGATGCTGGCACCTGGAGCGCCTGGA...GCCGGCTGAAGGCTGTCTGGACTTCCGATGTCCTGAGGTGGAAGTCCACCTGAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000098132.11 ENSMUST00000108040.8 ENSMUST00000108041.8 ENSMUST00000108042.3 |
||
CDS-3UTR GCA 90 bp | CTGAGACCTCCATCCACAGGGATCCACTGCCCCGCCTCTTTCTGCCTGTCCTTTGGCCTTGGGTCCGGCTaGAAGGAAGGCCTTGCAGGA | + |
Preference number: 4 (lower is better) Translates to: LRPPSTGIHCPASFCLSFGLGSG*KEGLAG Trigger: TCCTGCAAGGCCTTCCTTGCAGCCGGACCCAAGGCC...AAAGGACAGGCAGAAAGAGGCGGGGCAGTGGATCCCTGTGGATGGAGGTCTCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000098132.11 ENSMUST00000108040.8 ENSMUST00000108041.8 ENSMUST00000108042.3 |
||
CDS-3UTR CCA 90 bp | CTCAGGTGGACTTCCACCTCAGGACATCGGAAGTCCAGACAGCCTTCAGCCGGCCCAGTAGGCACGTGCTaGCACCCAGTGGGTTCACCT | + |
Preference number: 4 (lower is better) Translates to: LRWTSTSGHRKSRQPSAGPVGTC*HPVGSP Trigger: AGGTGAACCCACTGGGTGCCAGCACGTGCCTACTGG...GCCGGCTGAAGGCTGTCTGGACTTCCGATGTCCTGAGGTGGAAGTCCACCTGAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000098132.11 ENSMUST00000108040.8 ENSMUST00000108041.8 ENSMUST00000108042.3 |
||
CDS-3UTR CCA 90 bp | GGACTTCCACCTCAGGACATCGGAAGTCCAGACAGCCTTCAGCCGGCAGCAAGTAGCAGAAAGTGGGGTTaGCGACGCCAGGAGGCAGGG | + |
Preference number: 4 (lower is better) Translates to: GLPPQDIGSPDSLQPAASSRKWG*RRQEAG Trigger: CCCTGCCTCCTGGCGTCGCCAACCCCACTTTCTGCT...ACTTGCTGCCGGCTGAAGGCTGTCTGGACTTCCGATGTCCTGAGGTGGAAGTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000098132.11 ENSMUST00000108040.8 ENSMUST00000108041.8 ENSMUST00000108042.3 |
||
CDS-3UTR GCA 90 bp | GGACTTCCACCTCAGGACATCGGAAGTCCAGACAGCCTTCAGCCGGCAGCAAGTTCCAGGCGCTCCAGGTaGCAGCATCCAGAAAGTCCC | + |
Preference number: 4 (lower is better) Translates to: GLPPQDIGSPDSLQPAASSRRSR*QHPESP Trigger: GGGACTTTCTGGATGCTGGCACCTGGAGCGCCTGGA...ACTTGCTGCCGGCTGAAGGCTGTCTGGACTTCCGATGTCCTGAGGTGGAAGTCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000098132.11 ENSMUST00000108040.8 ENSMUST00000108041.8 ENSMUST00000108042.3 |
||
CDS-3UTR GCA 90 bp | CACAGGGATCCACTGCCCCGCCTCTTTCTGCCTGTCCTTTTAACCACCCAAGTCGGCCTTGGGTCCGGCTaGAAGGAAGGCCTTGCAGGA | + |
Preference number: 4 (lower is better) Translates to: HRDPLPRLFLPVLLTTQVGLGSG*KEGLAG Trigger: TCCTGCAAGGCCTTCCTTGCAGCCGGACCCAAGGCC...GACTTGGGTGGTTAAAAGGACAGGCAGAAAGAGGCGGGGCAGTGGATCCCTGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000098132.11 ENSMUST00000108040.8 ENSMUST00000108041.8 ENSMUST00000108042.3 |
||
CDS-3UTR CCA 90 bp | AACTCTTCACACTTCCCAGAAGGGCCAAGCCCAAGACCGCACACACTCTCCAATCGGCCACCAGGACCCTaGTCAGCCCTGAGCAGCTGC | + |
Preference number: 4 (lower is better) Translates to: NSSHFPEGPSPRPHTLSNRPPGP*SALSSC Trigger: GCAGCTGCTCAGGGCTGACCAGGGTCCTGGTGGCCG...ATTGGAGAGTGTGTGCGGTCTTGGGCTTGGCCCTTCTGGGAAGTGTGAAGAGTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000098132.11 ENSMUST00000108040.8 ENSMUST00000108041.8 ENSMUST00000108042.3 |
||
CDS-3UTR CCA 90 bp | TCTTCACACTTCCCAGAAGGGCCAAGCCCAAGACCGCACACACTCTCCAATCATCGGCCACCAGGACCCTaGTCAGCCCTGAGCAGCTGC | + |
Preference number: 4 (lower is better) Translates to: SSHFPEGPSPRPHTLSNHRPPGP*SALSSC Trigger: GCAGCTGCTCAGGGCTGACCAGGGTCCTGGTGGCCG...ATGATTGGAGAGTGTGTGCGGTCTTGGGCTTGGCCCTTCTGGGAAGTGTGAAGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000098132.11 ENSMUST00000108040.8 ENSMUST00000108041.8 ENSMUST00000108042.3 |
||
CDS-3UTR CCA 90 bp | AGCTCAGACTTTCAGCTGAGACCTCCATCCACAGGGATCCACTGCCCCGCCTCTCCAGTAGGCACGTGCTaGCACCCAGTGGGTTCACCT | + |
Preference number: 4 (lower is better) Translates to: SSDFQLRPPSTGIHCPASPVGTC*HPVGSP Trigger: AGGTGAACCCACTGGGTGCCAGCACGTGCCTACTGG...AGAGGCGGGGCAGTGGATCCCTGTGGATGGAGGTCTCAGCTGAAAGTCTGAGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000098132.11 ENSMUST00000108040.8 ENSMUST00000108041.8 ENSMUST00000108042.3 |
||
CDS-3UTR CCA 90 bp | GTGGACTTCCACCTCAGGACATCGGAAGTCCAGACAGCCTTCAGCCGGCAGCAACAGGGTATGTCCAGCTaGCATGCAGGCGTCTCGGGT | + |
Preference number: 4 (lower is better) Translates to: VDFHLRTSEVQTAFSRQQQGMSS*HAGVSG Trigger: ACCCGAGACGCCTGCATGCCAGCTGGACATACCCTG...TTGCTGCCGGCTGAAGGCTGTCTGGACTTCCGATGTCCTGAGGTGGAAGTCCAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000098132.11 ENSMUST00000108040.8 ENSMUST00000108041.8 ENSMUST00000108042.3 |
||
CDS-3UTR CCA 90 bp | GGACTTCCACCTCAGGACATCGGAAGTCCAGACAGCCTTCAGCCGGCAGCAAGTCACCGTGGACCAGGCTaGATGCTGTGCTGGTCGGTA | + |
Preference number: 4 (lower is better) Translates to: GLPPQDIGSPDSLQPAASHRGPG*MLCWSV Trigger: TACCGACCAGCACAGCATCCAGCCTGGTCCACGGTG...ACTTGCTGCCGGCTGAAGGCTGTCTGGACTTCCGATGTCCTGAGGTGGAAGTCC 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000098132.11 ENSMUST00000108040.8 ENSMUST00000108041.8 ENSMUST00000108042.3 |
||
CDS-3UTR CCA 90 bp | CCACAGGGATCCACTGCCCCGCCTCTTTCTGCCTGTCCTTTTAACCACCCAAGTGACTCGTACCGCGTGTaGCAGCCCAGCCACAGCATC | + |
Preference number: 4 (lower is better) Translates to: PQGSTAPPLSACPFNHPSDSYRV*QPSHSI Trigger: GATGCTGTGGCTGGGCTGCCACACGCGGTACGAGTC...ACTTGGGTGGTTAAAAGGACAGGCAGAAAGAGGCGGGGCAGTGGATCCCTGTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000098132.11 ENSMUST00000108040.8 ENSMUST00000108041.8 ENSMUST00000108042.3 |
||
CDS-3UTR CCA 90 bp | CACAGGGATCCACTGCCCCGCCTCTTTCTGCCTGTCCTTTTAACCACCCAAGTCGACTCGTACCGCGTGTaGCAGCCCAGCCACAGCATC | + |
Preference number: 4 (lower is better) Translates to: HRDPLPRLFLPVLLTTQVDSYRV*QPSHSI Trigger: GATGCTGTGGCTGGGCTGCCACACGCGGTACGAGTC...GACTTGGGTGGTTAAAAGGACAGGCAGAAAGAGGCGGGGCAGTGGATCCCTGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000098132.11 ENSMUST00000108040.8 ENSMUST00000108041.8 ENSMUST00000108042.3 |
||
CDS-3UTR TCA 90 bp | CACTTCCCAGAAGGGCCAAGCCCAAGACCGCACACACTCTCCAATCATCTGTACGCCGGGCTGTCCTCCTaGGCTACTACTGCCTCTAGC | + |
Preference number: 4 (lower is better) Translates to: HFPEGPSPRPHTLSNHLYAGLSS*ATTASS Trigger: GCTAGAGGCAGTAGTAGCTCAGGAGGACAGCCCGGC...GTACAGATGATTGGAGAGTGTGTGCGGTCTTGGGCTTGGCCCTTCTGGGAAGTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000098132.11 ENSMUST00000108040.8 ENSMUST00000108041.8 ENSMUST00000108042.3 |
||
CDS-3UTR GCA 90 bp | TCAGGTGGACTTCCACCTCAGGACATCGGAAGTCCAGACAGCCTTCAGCCGGCACATCCAGTAGGCACGTaGTGGCACCCAGTGGGTTCA | + |
Preference number: 4 (lower is better) Translates to: SGGLPPQDIGSPDSLQPAHPVGT*WHPVGS Trigger: TGAACCCACTGGGTGCCAGCACGTGCCTACTGGATG...TGCCGGCTGAAGGCTGTCTGGACTTCCGATGTCCTGAGGTGGAAGTCCACCTGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000098132.11 ENSMUST00000108040.8 ENSMUST00000108041.8 ENSMUST00000108042.3 |
||
CDS-3UTR GCA 90 bp | AAAGAGCTCAGACTTTCAGCTGAGACCTCCATCCACAGGGATCCACTGCCCCGCTCCAGGCGCTCCAGGTaGCAGCATCCAGAAAGTCCC | + |
Preference number: 4 (lower is better) Translates to: KELRLSAETSIHRDPLPRSRRSR*QHPESP Trigger: GGGACTTTCTGGATGCTGGCACCTGGAGCGCCTGGA...GCGGGGCAGTGGATCCCTGTGGATGGAGGTCTCAGCTGAAAGTCTGAGCTCTTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000098132.11 ENSMUST00000108040.8 ENSMUST00000108041.8 ENSMUST00000108042.3 |
||
CDS-3UTR GCA 90 bp | TCAGGTGGACTTCCACCTCAGGACATCGGAAGTCCAGACAGCCTTCAGCCGGCAACTACTGCCTCTAGCTaGTGTCCGTGTCCCTGGCTC | + |
Preference number: 4 (lower is better) Translates to: SGGLPPQDIGSPDSLQPATTASS*CPCPWL Trigger: GAGCCAGGGACACGGACAGCAGCTAGAGGCAGTAGT...TGCCGGCTGAAGGCTGTCTGGACTTCCGATGTCCTGAGGTGGAAGTCCACCTGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000098132.11 ENSMUST00000108040.8 ENSMUST00000108041.8 ENSMUST00000108042.3 |
||
CDS-3UTR GCA 90 bp | AGCTCAGACTTTCAGCTGAGACCTCCATCCACAGGGATCCACTGCCCCGCCTCTACTACTGCCTCTAGCTaGTGTCCGTGTCCCTGGCTC | + |
Preference number: 4 (lower is better) Translates to: SSDFQLRPPSTGIHCPASTTASS*CPCPWL Trigger: GAGCCAGGGACACGGACAGCAGCTAGAGGCAGTAGT...AGAGGCGGGGCAGTGGATCCCTGTGGATGGAGGTCTCAGCTGAAAGTCTGAGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000098132.11 ENSMUST00000108040.8 ENSMUST00000108041.8 ENSMUST00000108042.3 |
||
CDS-3UTR CCA 90 bp | GACTTTCAGCTGAGACCTCCATCCACAGGGATCCACTGCCCCGCCTCTTTCTGCCCGAAACCAGGACACTaGAGTCCCAGCACTCACTCC | + |
Preference number: 4 (lower is better) Translates to: DFQLRPPSTGIHCPASFCPKPGH*SPSTHS Trigger: GGAGTGAGTGCTGGGACTCCAGTGTCCTGGTTTCGG...GCAGAAAGAGGCGGGGCAGTGGATCCCTGTGGATGGAGGTCTCAGCTGAAAGTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000098132.11 ENSMUST00000108040.8 ENSMUST00000108041.8 ENSMUST00000108042.3 |
||
CDS-3UTR CCA 90 bp | TCAGGTGGACTTCCACCTCAGGACATCGGAAGTCCAGACAGCCTTCAGCCGGCACCGAAACCAGGACACTaGAGTCCCAGCACTCACTCC | + |
Preference number: 4 (lower is better) Translates to: SGGLPPQDIGSPDSLQPAPKPGH*SPSTHS Trigger: GGAGTGAGTGCTGGGACTCCAGTGTCCTGGTTTCGG...TGCCGGCTGAAGGCTGTCTGGACTTCCGATGTCCTGAGGTGGAAGTCCACCTGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000098132.11 ENSMUST00000108040.8 ENSMUST00000108041.8 ENSMUST00000108042.3 |
||
CDS-3UTR CCA 90 bp | CCACAGGGATCCACTGCCCCGCCTCTTTCTGCCTGTCCTTTTAACCACCCAAGTCCAGTAGGCACGTGCTaGCACCCAGTGGGTTCACCT | + |
Preference number: 4 (lower is better) Translates to: PQGSTAPPLSACPFNHPSPVGTC*HPVGSP Trigger: AGGTGAACCCACTGGGTGCCAGCACGTGCCTACTGG...ACTTGGGTGGTTAAAAGGACAGGCAGAAAGAGGCGGGGCAGTGGATCCCTGTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000098132.11 ENSMUST00000108040.8 ENSMUST00000108041.8 ENSMUST00000108042.3 |
||
CDS-3UTR CCA 90 bp | GACTTTCAGCTGAGACCTCCATCCACAGGGATCCACTGCCCCGCCTCTTTCTGCCCGCAGTCCTTGGGGTaGATCAGGACGCAAGATGCT | + |
Preference number: 4 (lower is better) Translates to: DFQLRPPSTGIHCPASFCPQSLG*IRTQDA Trigger: AGCATCTTGCGTCCTGATCCACCCCAAGGACTGCGG...GCAGAAAGAGGCGGGGCAGTGGATCCCTGTGGATGGAGGTCTCAGCTGAAAGTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000098132.11 ENSMUST00000108040.8 ENSMUST00000108041.8 ENSMUST00000108042.3 |
||
CDS-3UTR CCA 90 bp | TCAGGTGGACTTCCACCTCAGGACATCGGAAGTCCAGACAGCCTTCAGCCGGCACCGCAGTCCTTGGGGTaGATCAGGACGCAAGATGCT | + |
Preference number: 4 (lower is better) Translates to: SGGLPPQDIGSPDSLQPAPQSLG*IRTQDA Trigger: AGCATCTTGCGTCCTGATCCACCCCAAGGACTGCGG...TGCCGGCTGAAGGCTGTCTGGACTTCCGATGTCCTGAGGTGGAAGTCCACCTGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000098132.11 ENSMUST00000108040.8 ENSMUST00000108041.8 ENSMUST00000108042.3 |
||
CDS-3UTR CCA 90 bp | CACAGGGATCCACTGCCCCGCCTCTTTCTGCCTGTCCTTTTAACCACCCAAGTCCAGGGTATGTCCAGCTaGCATGCAGGCGTCTCGGGT | + |
Preference number: 4 (lower is better) Translates to: HRDPLPRLFLPVLLTTQVQGMSS*HAGVSG Trigger: ACCCGAGACGCCTGCATGCCAGCTGGACATACCCTG...GACTTGGGTGGTTAAAAGGACAGGCAGAAAGAGGCGGGGCAGTGGATCCCTGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000098132.11 ENSMUST00000108040.8 ENSMUST00000108041.8 ENSMUST00000108042.3 |
||
CDS-3UTR CCA 90 bp | CACTTCCCAGAAGGGCCAAGCCCAAGACCGCACACACTCTCCAATCATCTGTACAGCAGAAAGTGGGGTTaGCGACGCCAGGAGGCAGGG | + |
Preference number: 4 (lower is better) Translates to: HFPEGPSPRPHTLSNHLYSRKWG*RRQEAG Trigger: CCCTGCCTCCTGGCGTCGCCAACCCCACTTTCTGCT...GTACAGATGATTGGAGAGTGTGTGCGGTCTTGGGCTTGGCCCTTCTGGGAAGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000098132.11 ENSMUST00000108040.8 ENSMUST00000108041.8 ENSMUST00000108042.3 |
||
CDS-3UTR CCA 90 bp | AAAGAGCTCAGACTTTCAGCTGAGACCTCCATCCACAGGGATCCACTGCCCCGCCAATGGGCTCCACCGTaGACCAGGCTGGATGCTGTG | + |
Preference number: 4 (lower is better) Translates to: KELRLSAETSIHRDPLPRQWAPP*TRLDAV Trigger: CACAGCATCCAGCCTGGTCCACGGTGGAGCCCATTG...GCGGGGCAGTGGATCCCTGTGGATGGAGGTCTCAGCTGAAAGTCTGAGCTCTTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000098132.11 ENSMUST00000108040.8 ENSMUST00000108041.8 ENSMUST00000108042.3 |
||
CDS-3UTR CCA 90 bp | CACTTCCCAGAAGGGCCAAGCCCAAGACCGCACACACTCTCCAATCATCTGTACGACTCGTACCGCGTGTaGCAGCCCAGCCACAGCATC | + |
Preference number: 4 (lower is better) Translates to: HFPEGPSPRPHTLSNHLYDSYRV*QPSHSI Trigger: GATGCTGTGGCTGGGCTGCCACACGCGGTACGAGTC...GTACAGATGATTGGAGAGTGTGTGCGGTCTTGGGCTTGGCCCTTCTGGGAAGTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000098132.11 ENSMUST00000108040.8 ENSMUST00000108041.8 ENSMUST00000108042.3 |
||
CDS-3UTR CCA 90 bp | CAGAAGGGCCAAGCCCAAGACCGCACACACTCTCCAATCATCTGTACACACATGAGTACCCCAGGCCTCTaGGCTCCAGGCGCTCCAGGT | + |
Preference number: 4 (lower is better) Translates to: QKGQAQDRTHSPIICTHMSTPGL*APGAPG Trigger: ACCTGGAGCGCCTGGAGCCCAGAGGCCTGGGGTACT...CATGTGTGTACAGATGATTGGAGAGTGTGTGCGGTCTTGGGCTTGGCCCTTCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000098132.11 ENSMUST00000108040.8 ENSMUST00000108041.8 ENSMUST00000108042.3 |
||
CDS-3UTR CCA 90 bp | CTGAGACCTCCATCCACAGGGATCCACTGCCCCGCCTCTTTCTGCCTGTCCTTTGTGATCAAGTGGCCTTaGGTCCGGCTGCAAGGAAGG | + |
Preference number: 4 (lower is better) Translates to: LRPPSTGIHCPASFCLSFVIKWP*VRLQGR Trigger: CCTTCCTTGCAGCCGGACCCAAGGCCACTTGATCAC...AAAGGACAGGCAGAAAGAGGCGGGGCAGTGGATCCCTGTGGATGGAGGTCTCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000098132.11 ENSMUST00000108040.8 ENSMUST00000108041.8 ENSMUST00000108042.3 |
||
CDS-3UTR GCA 90 bp | CCACAGGGATCCACTGCCCCGCCTCTTTCTGCCTGTCCTTTTAACCACCCAAGTCATCCAGTAGGCACGTaGTGGCACCCAGTGGGTTCA | + |
Preference number: 4 (lower is better) Translates to: PQGSTAPPLSACPFNHPSHPVGT*WHPVGS Trigger: TGAACCCACTGGGTGCCAGCACGTGCCTACTGGATG...ACTTGGGTGGTTAAAAGGACAGGCAGAAAGAGGCGGGGCAGTGGATCCCTGTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000098132.11 ENSMUST00000108040.8 ENSMUST00000108041.8 ENSMUST00000108042.3 |
||
CDS-3UTR GCA 90 bp | CACCTCAGGACATCGGAAGTCCAGACAGCCTTCAGCCGGCAGCAAGTTTGGAGTCATCCAGTAGGCACGTaGTGGCACCCAGTGGGTTCA | + |
Preference number: 4 (lower is better) Translates to: HLRTSEVQTAFSRQQVWSHPVGT*WHPVGS Trigger: TGAACCCACTGGGTGCCAGCACGTGCCTACTGGATG...ACTCCAAACTTGCTGCCGGCTGAAGGCTGTCTGGACTTCCGATGTCCTGAGGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000098132.11 ENSMUST00000108040.8 ENSMUST00000108041.8 ENSMUST00000108042.3 |
||
CDS-3UTR GCA 90 bp | CACAGGGATCCACTGCCCCGCCTCTTTCTGCCTGTCCTTTTAACCACCCAAGTCCCAGGCTGGATGCTGTaGTGGTCGGTATTGCAACCG | + |
Preference number: 4 (lower is better) Translates to: HRDPLPRLFLPVLLTTQVPGWML*WSVLQP Trigger: CGGTTGCAATACCGACCAGCACAGCATCCAGCCTGG...GACTTGGGTGGTTAAAAGGACAGGCAGAAAGAGGCGGGGCAGTGGATCCCTGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000098132.11 ENSMUST00000108040.8 ENSMUST00000108041.8 ENSMUST00000108042.3 |
||
CDS-3UTR GCA 90 bp | CCCAGAAGGGCCAAGCCCAAGACCGCACACACTCTCCAATCATCTGTACACACATCCAGGCGCTCCAGGTaGCAGCATCCAGAAAGTCCC | + |
Preference number: 4 (lower is better) Translates to: PRRAKPKTAHTLQSSVHTSRRSR*QHPESP Trigger: GGGACTTTCTGGATGCTGGCACCTGGAGCGCCTGGA...TGTGTGTACAGATGATTGGAGAGTGTGTGCGGTCTTGGGCTTGGCCCTTCTGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000098132.11 ENSMUST00000108040.8 ENSMUST00000108041.8 ENSMUST00000108042.3 |
||
CDS-3UTR GCA 90 bp | CACCTCAGGACATCGGAAGTCCAGACAGCCTTCAGCCGGCAGCAAGTTTGGAGTACTACTGCCTCTAGCTaGTGTCCGTGTCCCTGGCTC | + |
Preference number: 4 (lower is better) Translates to: HLRTSEVQTAFSRQQVWSTTASS*CPCPWL Trigger: GAGCCAGGGACACGGACAGCAGCTAGAGGCAGTAGT...ACTCCAAACTTGCTGCCGGCTGAAGGCTGTCTGGACTTCCGATGTCCTGAGGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000098132.11 ENSMUST00000108040.8 ENSMUST00000108041.8 ENSMUST00000108042.3 |
||
CDS-3UTR GCA 90 bp | CAGAAGGGCCAAGCCCAAGACCGCACACACTCTCCAATCATCTGTACACACATGGGCCTTGGGTCCGGCTaGAAGGAAGGCCTTGCAGGA | + |
Preference number: 4 (lower is better) Translates to: QKGQAQDRTHSPIICTHMGLGSG*KEGLAG Trigger: TCCTGCAAGGCCTTCCTTGCAGCCGGACCCAAGGCC...CATGTGTGTACAGATGATTGGAGAGTGTGTGCGGTCTTGGGCTTGGCCCTTCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000098132.11 ENSMUST00000108040.8 ENSMUST00000108041.8 ENSMUST00000108042.3 |
||
CDS-3UTR CCA 90 bp | CACAGGGATCCACTGCCCCGCCTCTTTCTGCCTGTCCTTTTAACCACCCAAGTCCGTGCTGGCACCCAGTaGGTTCACCTCGGTCACATT | + |
Preference number: 4 (lower is better) Translates to: HRDPLPRLFLPVLLTTQVRAGTQ*VHLGHI Trigger: AATGTGACCGAGGTGAACCCACTGGGTGCCAGCACG...GACTTGGGTGGTTAAAAGGACAGGCAGAAAGAGGCGGGGCAGTGGATCCCTGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000098132.11 ENSMUST00000108040.8 ENSMUST00000108041.8 ENSMUST00000108042.3 |
||
CDS-3UTR CCA 90 bp | CAGAAGGGCCAAGCCCAAGACCGCACACACTCTCCAATCATCTGTACACACATGAGCAGAAAGTGGGGTTaGCGACGCCAGGAGGCAGGG | + |
Preference number: 4 (lower is better) Translates to: QKGQAQDRTHSPIICTHMSRKWG*RRQEAG Trigger: CCCTGCCTCCTGGCGTCGCCAACCCCACTTTCTGCT...CATGTGTGTACAGATGATTGGAGAGTGTGTGCGGTCTTGGGCTTGGCCCTTCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000098132.11 ENSMUST00000108040.8 ENSMUST00000108041.8 ENSMUST00000108042.3 |
||
CDS-3UTR CCA 90 bp | TTTCAGCTGAGACCTCCATCCACAGGGATCCACTGCCCCGCCTCTTTCTGCCTGAACTTGAGCAGAAAGTaGGGTTGGCGACGCCAGGAG | + |
Preference number: 4 (lower is better) Translates to: FQLRPPSTGIHCPASFCLNLSRK*GWRRQE Trigger: CTCCTGGCGTCGCCAACCCCACTTTCTGCTCAAGTT...CAGGCAGAAAGAGGCGGGGCAGTGGATCCCTGTGGATGGAGGTCTCAGCTGAAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000098132.11 ENSMUST00000108040.8 ENSMUST00000108041.8 ENSMUST00000108042.3 |
||
CDS-3UTR CCA 90 bp | GACTTTCAGCTGAGACCTCCATCCACAGGGATCCACTGCCCCGCCTCTTTCTGCGGCTGGATGCTGTGCTaGTCGGTATTGCAACCGGAA | + |
Preference number: 4 (lower is better) Translates to: DFQLRPPSTGIHCPASFCGWMLC*SVLQPE Trigger: TTCCGGTTGCAATACCGACCAGCACAGCATCCAGCC...GCAGAAAGAGGCGGGGCAGTGGATCCCTGTGGATGGAGGTCTCAGCTGAAAGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000098132.11 ENSMUST00000108040.8 ENSMUST00000108041.8 ENSMUST00000108042.3 |
||
CDS-3UTR GCA 90 bp | GGGCCAAGCCCAAGACCGCACACACTCTCCAATCATCTGTACACACATGCAGAGCATCCAGTAGGCACGTaGTGGCACCCAGTGGGTTCA | + |
Preference number: 4 (lower is better) Translates to: GPSPRPHTLSNHLYTHAEHPVGT*WHPVGS Trigger: TGAACCCACTGGGTGCCAGCACGTGCCTACTGGATG...CTCTGCATGTGTGTACAGATGATTGGAGAGTGTGTGCGGTCTTGGGCTTGGCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000098132.11 ENSMUST00000108040.8 ENSMUST00000108041.8 ENSMUST00000108042.3 |
||
CDS-3UTR GCA 90 bp | CACTTCCCAGAAGGGCCAAGCCCAAGACCGCACACACTCTCCAATCATCTGTACCCAGGCTGGATGCTGTaGTGGTCGGTATTGCAACCG | + |
Preference number: 4 (lower is better) Translates to: HFPEGPSPRPHTLSNHLYPGWML*WSVLQP Trigger: CGGTTGCAATACCGACCAGCACAGCATCCAGCCTGG...GTACAGATGATTGGAGAGTGTGTGCGGTCTTGGGCTTGGCCCTTCTGGGAAGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000098132.11 ENSMUST00000108040.8 ENSMUST00000108041.8 ENSMUST00000108042.3 |
||
CDS-3UTR GCA 90 bp | AAGAGCTCAGACTTTCAGCTGAGACCTCCATCCACAGGGATCCACTGCCCCGCCAAGAGCCCAGGTTTTTaGGGTCCATCCTTCCCACTC | + |
Preference number: 4 (lower is better) Translates to: KSSDFQLRPPSTGIHCPAKSPGF*GPSFPL Trigger: GAGTGGGAAGGATGGACCGCAAAAACCTGGGCTCTT...GGCGGGGCAGTGGATCCCTGTGGATGGAGGTCTCAGCTGAAAGTCTGAGCTCTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000098132.11 ENSMUST00000108040.8 ENSMUST00000108041.8 ENSMUST00000108042.3 |
||
CDS-3UTR CCA 90 bp | CACTTCCCAGAAGGGCCAAGCCCAAGACCGCACACACTCTCCAATCATCTGTACCCAGGTTGTCCATACTaGACCCCTGGAGGACCCCAA | + |
Preference number: 4 (lower is better) Translates to: HFPEGPSPRPHTLSNHLYPGCPY*TPGGPQ Trigger: TTGGGGTCCTCCAGGGGTCCAGTATGGACAACCTGG...GTACAGATGATTGGAGAGTGTGTGCGGTCTTGGGCTTGGCCCTTCTGGGAAGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000098132.11 ENSMUST00000108040.8 ENSMUST00000108041.8 ENSMUST00000108042.3 |
||
CDS-3UTR CCA 90 bp | TTCAACTCTTCACACTTCCCAGAAGGGCCAAGCCCAAGACCGCACACACTCTCCGGCAAACCGCTGACCTaGCCTGGACTCCAAGTACAG | + |
Preference number: 4 (lower is better) Translates to: FNSSHFPEGPSPRPHTLSGKPLT*PGLQVQ Trigger: CTGTACTTGGAGTCCAGGCCAGGTCAGCGGTTTGCC...GGAGAGTGTGTGCGGTCTTGGGCTTGGCCCTTCTGGGAAGTGTGAAGAGTTGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000098132.11 ENSMUST00000108040.8 ENSMUST00000108041.8 ENSMUST00000108042.3 |
||
CDS-3UTR CCA 90 bp | GGGCCAAGCCCAAGACCGCACACACTCTCCAATCATCTGTACACACATGCAGAGCCGCAGTCCTTGGGGTaGATCAGGACGCAAGATGCT | + |
Preference number: 4 (lower is better) Translates to: GPSPRPHTLSNHLYTHAEPQSLG*IRTQDA Trigger: AGCATCTTGCGTCCTGATCCACCCCAAGGACTGCGG...CTCTGCATGTGTGTACAGATGATTGGAGAGTGTGTGCGGTCTTGGGCTTGGCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000098132.11 ENSMUST00000108040.8 ENSMUST00000108041.8 ENSMUST00000108042.3 |
||
CDS-3UTR CCA 90 bp | CACCTCAGGACATCGGAAGTCCAGACAGCCTTCAGCCGGCAGCAAGTTTGGAGTGGCTGGATGCTGTGCTaGTCGGTATTGCAACCGGAA | + |
Preference number: 4 (lower is better) Translates to: HLRTSEVQTAFSRQQVWSGWMLC*SVLQPE Trigger: TTCCGGTTGCAATACCGACCAGCACAGCATCCAGCC...ACTCCAAACTTGCTGCCGGCTGAAGGCTGTCTGGACTTCCGATGTCCTGAGGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000098132.11 ENSMUST00000108040.8 ENSMUST00000108041.8 ENSMUST00000108042.3 |
||
CDS-3UTR CCA 90 bp | CAGAAGGGCCAAGCCCAAGACCGCACACACTCTCCAATCATCTGTACACACATGCACCGTGGACCAGGCTaGATGCTGTGCTGGTCGGTA | + |
Preference number: 4 (lower is better) Translates to: QKGQAQDRTHSPIICTHMHRGPG*MLCWSV Trigger: TACCGACCAGCACAGCATCCAGCCTGGTCCACGGTG...CATGTGTGTACAGATGATTGGAGAGTGTGTGCGGTCTTGGGCTTGGCCCTTCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000098132.11 ENSMUST00000108040.8 ENSMUST00000108041.8 ENSMUST00000108042.3 |
||
CDS-3UTR CCA 90 bp | TCTTCACACTTCCCAGAAGGGCCAAGCCCAAGACCGCACACACTCTCCAATCATCAATGGGCTCCACCGTaGACCAGGCTGGATGCTGTG | + |
Preference number: 4 (lower is better) Translates to: SSHFPEGPSPRPHTLSNHQWAPP*TRLDAV Trigger: CACAGCATCCAGCCTGGTCCACGGTGGAGCCCATTG...ATGATTGGAGAGTGTGTGCGGTCTTGGGCTTGGCCCTTCTGGGAAGTGTGAAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000098132.11 ENSMUST00000108040.8 ENSMUST00000108041.8 ENSMUST00000108042.3 |
||
CDS-3UTR CCA 90 bp | GAAGTCCAGACAGCCTTCAGCCGGCAGCAAGTTTGGAGTATAGGTGTCAAAGAAAGTACCCCAGGCCTCTaGGCTCCAGGCGCTCCAGGT | + |
Preference number: 4 (lower is better) Translates to: EVQTAFSRQQVWSIGVKESTPGL*APGAPG Trigger: ACCTGGAGCGCCTGGAGCCCAGAGGCCTGGGGTACT...TTCTTTGACACCTATACTCCAAACTTGCTGCCGGCTGAAGGCTGTCTGGACTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000098132.11 ENSMUST00000108040.8 ENSMUST00000108041.8 ENSMUST00000108042.3 |
||
CDS-3UTR CCA 90 bp | CTTCACACTTCCCAGAAGGGCCAAGCCCAAGACCGCACACACTCTCCAATCATCGTGATCAAGTGGCCTTaGGTCCGGCTGCAAGGAAGG | + |
Preference number: 4 (lower is better) Translates to: LHTSQKGQAQDRTHSPIIVIKWP*VRLQGR Trigger: CCTTCCTTGCAGCCGGACCCAAGGCCACTTGATCAC...GATGATTGGAGAGTGTGTGCGGTCTTGGGCTTGGCCCTTCTGGGAAGTGTGAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000098132.11 ENSMUST00000108040.8 ENSMUST00000108041.8 ENSMUST00000108042.3 |
||
CDS-3UTR TCA 90 bp | AGGAACACAGACTTCTGTACACATTCCTCAGGTGGACTTCCACCTCAGGACATCGCCGGGCTGTCCTCCTaGGCTACTACTGCCTCTAGC | + |
Preference number: 4 (lower is better) Translates to: RNTDFCTHSSGGLPPQDIAGLSS*ATTASS Trigger: GCTAGAGGCAGTAGTAGCTCAGGAGGACAGCCCGGC...GATGTCCTGAGGTGGAAGTCCACCTGAGGAATGTGTACAGAAGTCTGTGTTCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000098132.11 ENSMUST00000108040.8 ENSMUST00000108041.8 ENSMUST00000108042.3 |
||
CDS-3UTR GCA 90 bp | TTTCAGCTGAGACCTCCATCCACAGGGATCCACTGCCCCGCCTCTTTCTGCCTGTCTGGCAGACATAAGTaGCTTCATCAGGGCTGTCCA | + |
Preference number: 4 (lower is better) Translates to: FQLRPPSTGIHCPASFCLSGRHK*LHQGCP Trigger: TGGACAGCCCTGATGAAGGCACTTATGTCTGCCAGA...CAGGCAGAAAGAGGCGGGGCAGTGGATCCCTGTGGATGGAGGTCTCAGCTGAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000098132.11 ENSMUST00000108040.8 ENSMUST00000108041.8 ENSMUST00000108042.3 |
||
CDS-3UTR GCA 90 bp | AGCTCAGACTTTCAGCTGAGACCTCCATCCACAGGGATCCACTGCCCCGCCTCTTGTGCTGGTCGGTATTaGAACCGGAACTTGAGCAGA | + |
Preference number: 4 (lower is better) Translates to: SSDFQLRPPSTGIHCPASCAGRY*NRNLSR Trigger: TCTGCTCAAGTTCCGGTTGCAATACCGACCAGCACA...AGAGGCGGGGCAGTGGATCCCTGTGGATGGAGGTCTCAGCTGAAAGTCTGAGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000098132.11 ENSMUST00000108040.8 ENSMUST00000108041.8 ENSMUST00000108042.3 |
||
CDS-3UTR GCA 90 bp | TCTTCACACTTCCCAGAAGGGCCAAGCCCAAGACCGCACACACTCTCCAATCATGTGGACCAGGCTGGATaGTGTGCTGGTCGGTATTGC | + |
Preference number: 4 (lower is better) Translates to: SSHFPEGPSPRPHTLSNHVDQAG*CAGRYC Trigger: GCAATACCGACCAGCACAGCATCCAGCCTGGTCCAC...ATGATTGGAGAGTGTGTGCGGTCTTGGGCTTGGCCCTTCTGGGAAGTGTGAAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000098132.11 ENSMUST00000108040.8 ENSMUST00000108041.8 ENSMUST00000108042.3 |
||
CDS-3UTR GCA 90 bp | AACTCTTCACACTTCCCAGAAGGGCCAAGCCCAAGACCGCACACACTCTCCAATGTGGACCAGGCTGGATaGTGTGCTGGTCGGTATTGC | + |
Preference number: 4 (lower is better) Translates to: NSSHFPEGPSPRPHTLSNVDQAG*CAGRYC Trigger: GCAATACCGACCAGCACAGCATCCAGCCTGGTCCAC...ATTGGAGAGTGTGTGCGGTCTTGGGCTTGGCCCTTCTGGGAAGTGTGAAGAGTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000098132.11 ENSMUST00000108040.8 ENSMUST00000108041.8 ENSMUST00000108042.3 |
||
CDS-3UTR GCA 90 bp | CAGAAGGGCCAAGCCCAAGACCGCACACACTCTCCAATCATCTGTACACACATGGTGGACCAGGCTGGATaGTGTGCTGGTCGGTATTGC | + |
Preference number: 4 (lower is better) Translates to: QKGQAQDRTHSPIICTHMVDQAG*CAGRYC Trigger: GCAATACCGACCAGCACAGCATCCAGCCTGGTCCAC...CATGTGTGTACAGATGATTGGAGAGTGTGTGCGGTCTTGGGCTTGGCCCTTCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000098132.11 ENSMUST00000108040.8 ENSMUST00000108041.8 ENSMUST00000108042.3 |
||
CDS-3UTR CCA 90 bp | TCTTCACACTTCCCAGAAGGGCCAAGCCCAAGACCGCACACACTCTCCAATCATGGCAAACCGCTGACCTaGCCTGGACTCCAAGTACAG | + |
Preference number: 4 (lower is better) Translates to: SSHFPEGPSPRPHTLSNHGKPLT*PGLQVQ Trigger: CTGTACTTGGAGTCCAGGCCAGGTCAGCGGTTTGCC...ATGATTGGAGAGTGTGTGCGGTCTTGGGCTTGGCCCTTCTGGGAAGTGTGAAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000098132.11 ENSMUST00000108040.8 ENSMUST00000108041.8 ENSMUST00000108042.3 |
||
CDS-3UTR CCA 90 bp | TATTTCAACTCTTCACACTTCCCAGAAGGGCCAAGCCCAAGACCGCACACACTCCAGGGTATGTCCAGCTaGCATGCAGGCGTCTCGGGT | + |
Preference number: 4 (lower is better) Translates to: YFNSSHFPEGPSPRPHTLQGMSS*HAGVSG Trigger: ACCCGAGACGCCTGCATGCCAGCTGGACATACCCTG...GAGTGTGTGCGGTCTTGGGCTTGGCCCTTCTGGGAAGTGTGAAGAGTTGAAATA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000098132.11 ENSMUST00000108040.8 ENSMUST00000108041.8 ENSMUST00000108042.3 |
||
CDS-3UTR CCA 90 bp | GGGCCAAGCCCAAGACCGCACACACTCTCCAATCATCTGTACACACATGCAGAGAACTTGAGCAGAAAGTaGGGTTGGCGACGCCAGGAG | + |
Preference number: 4 (lower is better) Translates to: GPSPRPHTLSNHLYTHAENLSRK*GWRRQE Trigger: CTCCTGGCGTCGCCAACCCCACTTTCTGCTCAAGTT...CTCTGCATGTGTGTACAGATGATTGGAGAGTGTGTGCGGTCTTGGGCTTGGCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000098132.11 ENSMUST00000108040.8 ENSMUST00000108041.8 ENSMUST00000108042.3 |
||
CDS-3UTR CCA 90 bp | CACTTCCCAGAAGGGCCAAGCCCAAGACCGCACACACTCTCCAATCATCTGTACAACTTGAGCAGAAAGTaGGGTTGGCGACGCCAGGAG | + |
Preference number: 4 (lower is better) Translates to: HFPEGPSPRPHTLSNHLYNLSRK*GWRRQE Trigger: CTCCTGGCGTCGCCAACCCCACTTTCTGCTCAAGTT...GTACAGATGATTGGAGAGTGTGTGCGGTCTTGGGCTTGGCCCTTCTGGGAAGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000098132.11 ENSMUST00000108040.8 ENSMUST00000108041.8 ENSMUST00000108042.3 |
||
CDS-3UTR CCA 90 bp | CTTCACACTTCCCAGAAGGGCCAAGCCCAAGACCGCACACACTCTCCAATCATCGGCTGGATGCTGTGCTaGTCGGTATTGCAACCGGAA | + |
Preference number: 4 (lower is better) Translates to: LHTSQKGQAQDRTHSPIIGWMLC*SVLQPE Trigger: TTCCGGTTGCAATACCGACCAGCACAGCATCCAGCC...GATGATTGGAGAGTGTGTGCGGTCTTGGGCTTGGCCCTTCTGGGAAGTGTGAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000098132.11 ENSMUST00000108040.8 ENSMUST00000108041.8 ENSMUST00000108042.3 |
||
CDS-3UTR CCA 90 bp | CTTCACACTTCCCAGAAGGGCCAAGCCCAAGACCGCACACACTCTCCAATCATCTTTCCACCGGGATCATaGGTGCCAAGAGCCCAGGTT | + |
Preference number: 4 (lower is better) Translates to: LHTSQKGQAQDRTHSPIIFPPGS*VPRAQV Trigger: AACCTGGGCTCTTGGCACCCATGATCCCGGTGGAAA...GATGATTGGAGAGTGTGTGCGGTCTTGGGCTTGGCCCTTCTGGGAAGTGTGAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000098132.11 ENSMUST00000108040.8 ENSMUST00000108041.8 ENSMUST00000108042.3 |
||
CDS-3UTR CCA 90 bp | AAAGAGCTCAGACTTTCAGCTGAGACCTCCATCCACAGGGATCCACTGCCCCGCTCAGCTGAAGTTCTCTaGGGTCCTCTGCAGGTTTGG | + |
Preference number: 4 (lower is better) Translates to: KELRLSAETSIHRDPLPRSAEVL*GPLQVW Trigger: CCAAACCTGCAGAGGACCCCAGAGAACTTCAGCTGA...GCGGGGCAGTGGATCCCTGTGGATGGAGGTCTCAGCTGAAAGTCTGAGCTCTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000098132.11 ENSMUST00000108040.8 ENSMUST00000108041.8 ENSMUST00000108042.3 |
||
CDS-3UTR GCA 90 bp | CCACAGGGATCCACTGCCCCGCCTCTTTCTGCCTGTCCTTTTAACCACCCAAGTTCTGGCAGACATAAGTaGCTTCATCAGGGCTGTCCA | + |
Preference number: 4 (lower is better) Translates to: PQGSTAPPLSACPFNHPSSGRHK*LHQGCP Trigger: TGGACAGCCCTGATGAAGGCACTTATGTCTGCCAGA...ACTTGGGTGGTTAAAAGGACAGGCAGAAAGAGGCGGGGCAGTGGATCCCTGTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000098132.11 ENSMUST00000108040.8 ENSMUST00000108041.8 ENSMUST00000108042.3 |
||
CDS-3UTR GCA 90 bp | AACTCTTCACACTTCCCAGAAGGGCCAAGCCCAAGACCGCACACACTCTCCAATCTCACTCCAGAACTCTaGCCCATGGACCACACATCG | + |
Preference number: 4 (lower is better) Translates to: NSSHFPEGPSPRPHTLSNLTPEL*PMDHTS Trigger: CGATGTGTGGTCCATGGGGCAGAGTTCTGGAGTGAG...ATTGGAGAGTGTGTGCGGTCTTGGGCTTGGCCCTTCTGGGAAGTGTGAAGAGTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000098132.11 ENSMUST00000108040.8 ENSMUST00000108041.8 ENSMUST00000108042.3 |
||
CDS-3UTR CCA 90 bp | ACGATCACAGGAACACAGACTTCTGTACACATTCCTCAGGTGGACTTCCACCTCCACCGTGGACCAGGCTaGATGCTGTGCTGGTCGGTA | + |
Preference number: 4 (lower is better) Translates to: TITGTQTSVHIPQVDFHLHRGPG*MLCWSV Trigger: TACCGACCAGCACAGCATCCAGCCTGGTCCACGGTG...GAGGTGGAAGTCCACCTGAGGAATGTGTACAGAAGTCTGTGTTCCTGTGATCGT 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000098132.11 ENSMUST00000108040.8 ENSMUST00000108041.8 ENSMUST00000108042.3 |
||
CDS-3UTR CCA 90 bp | GAGTATAGGTGTCAAAGAAAAGAGCTCAGACTTTCAGCTGAGACCTCCATCCACAGTACCCCAGGCCTCTaGGCTCCAGGCGCTCCAGGT | + |
Preference number: 4 (lower is better) Translates to: EYRCQRKELRLSAETSIHSTPGL*APGAPG Trigger: ACCTGGAGCGCCTGGAGCCCAGAGGCCTGGGGTACT...GTGGATGGAGGTCTCAGCTGAAAGTCTGAGCTCTTTTCTTTGACACCTATACTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000098132.11 ENSMUST00000108040.8 ENSMUST00000108041.8 ENSMUST00000108042.3 |
||
CDS-3UTR CCA 90 bp | TATTTCAACTCTTCACACTTCCCAGAAGGGCCAAGCCCAAGACCGCACACACTCGTGATCAAGTGGCCTTaGGTCCGGCTGCAAGGAAGG | + |
Preference number: 4 (lower is better) Translates to: YFNSSHFPEGPSPRPHTLVIKWP*VRLQGR Trigger: CCTTCCTTGCAGCCGGACCCAAGGCCACTTGATCAC...GAGTGTGTGCGGTCTTGGGCTTGGCCCTTCTGGGAAGTGTGAAGAGTTGAAATA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000098132.11 ENSMUST00000108040.8 ENSMUST00000108041.8 ENSMUST00000108042.3 |
||
CDS-3UTR CCA 90 bp | TCAGGTGGACTTCCACCTCAGGACATCGGAAGTCCAGACAGCCTTCAGCCGGCAGGTCCTCTGCAGGTTTaGAATTCCTGGAAGCTTTTC | + |
Preference number: 4 (lower is better) Translates to: SGGLPPQDIGSPDSLQPAGPLQV*NSWKLF Trigger: GAAAAGCTTCCAGGAATTCCAAACCTGCAGAGGACC...TGCCGGCTGAAGGCTGTCTGGACTTCCGATGTCCTGAGGTGGAAGTCCACCTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000098132.11 ENSMUST00000108040.8 ENSMUST00000108041.8 ENSMUST00000108042.3 |
||
CDS-3UTR CCA 90 bp | TTCAACTCTTCACACTTCCCAGAAGGGCCAAGCCCAAGACCGCACACACTCTCCTCAGCTGAAGTTCTCTaGGGTCCTCTGCAGGTTTGG | + |
Preference number: 4 (lower is better) Translates to: FNSSHFPEGPSPRPHTLSSAEVL*GPLQVW Trigger: CCAAACCTGCAGAGGACCCCAGAGAACTTCAGCTGA...GGAGAGTGTGTGCGGTCTTGGGCTTGGCCCTTCTGGGAAGTGTGAAGAGTTGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000098132.11 ENSMUST00000108040.8 ENSMUST00000108041.8 ENSMUST00000108042.3 |
||
CDS-3UTR TCA 90 bp | CTGTACACACATGCAGAGAACTTTTGCTCCCTGTCTCACATACACACACGATCAGCCGGGCTGTCCTCCTaGGCTACTACTGCCTCTAGC | + |
Preference number: 4 (lower is better) Translates to: LYTHAENFCSLSHIHTRSAGLSS*ATTASS Trigger: GCTAGAGGCAGTAGTAGCTCAGGAGGACAGCCCGGC...TGATCGTGTGTGTATGTGAGACAGGGAGCAAAAGTTCTCTGCATGTGTGTACAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000098132.11 ENSMUST00000108040.8 ENSMUST00000108041.8 ENSMUST00000108042.3 |
||
CDS-3UTR GCA 90 bp | TTCAACTCTTCACACTTCCCAGAAGGGCCAAGCCCAAGACCGCACACACTCTCCTGTGCTGGTCGGTATTaGAACCGGAACTTGAGCAGA | + |
Preference number: 4 (lower is better) Translates to: FNSSHFPEGPSPRPHTLSCAGRY*NRNLSR Trigger: TCTGCTCAAGTTCCGGTTGCAATACCGACCAGCACA...GGAGAGTGTGTGCGGTCTTGGGCTTGGCCCTTCTGGGAAGTGTGAAGAGTTGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000098132.11 ENSMUST00000108040.8 ENSMUST00000108041.8 ENSMUST00000108042.3 |
||
CDS-3UTR GCA 90 bp | AAAGAAAAGAGCTCAGACTTTCAGCTGAGACCTCCATCCACAGGGATCCACTGCCCAGGCTGGATGCTGTaGTGGTCGGTATTGCAACCG | + |
Preference number: 4 (lower is better) Translates to: KEKSSDFQLRPPSTGIHCPGWML*WSVLQP Trigger: CGGTTGCAATACCGACCAGCACAGCATCCAGCCTGG...GCAGTGGATCCCTGTGGATGGAGGTCTCAGCTGAAAGTCTGAGCTCTTTTCTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000098132.11 ENSMUST00000108040.8 ENSMUST00000108041.8 ENSMUST00000108042.3 |
||
CDS-3UTR GCA 90 bp | GGTGTCAAAGAAAAGAGCTCAGACTTTCAGCTGAGACCTCCATCCACAGGGATCCCAGGCTGGATGCTGTaGTGGTCGGTATTGCAACCG | + |
Preference number: 4 (lower is better) Translates to: GVKEKSSDFQLRPPSTGIPGWML*WSVLQP Trigger: CGGTTGCAATACCGACCAGCACAGCATCCAGCCTGG...GATCCCTGTGGATGGAGGTCTCAGCTGAAAGTCTGAGCTCTTTTCTTTGACACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000098132.11 ENSMUST00000108040.8 ENSMUST00000108041.8 ENSMUST00000108042.3 |
||
CDS-3UTR GCA 90 bp | ATCACAGGAACACAGACTTCTGTACACATTCCTCAGGTGGACTTCCACCTCAGGACTACTGCCTCTAGCTaGTGTCCGTGTCCCTGGCTC | + |
Preference number: 4 (lower is better) Translates to: ITGTQTSVHIPQVDFHLRTTASS*CPCPWL Trigger: GAGCCAGGGACACGGACAGCAGCTAGAGGCAGTAGT...CCTGAGGTGGAAGTCCACCTGAGGAATGTGTACAGAAGTCTGTGTTCCTGTGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000098132.11 ENSMUST00000108040.8 ENSMUST00000108041.8 ENSMUST00000108042.3 |
||
CDS-3UTR GCA 90 bp | GAGTATAGGTGTCAAAGAAAAGAGCTCAGACTTTCAGCTGAGACCTCCATCCACGGCCTTGGGTCCGGCTaGAAGGAAGGCCTTGCAGGA | + |
Preference number: 4 (lower is better) Translates to: EYRCQRKELRLSAETSIHGLGSG*KEGLAG Trigger: TCCTGCAAGGCCTTCCTTGCAGCCGGACCCAAGGCC...GTGGATGGAGGTCTCAGCTGAAAGTCTGAGCTCTTTTCTTTGACACCTATACTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000098132.11 ENSMUST00000108040.8 ENSMUST00000108041.8 ENSMUST00000108042.3 |
||
CDS-3UTR GCA 90 bp | GGCCAAGCCCAAGACCGCACACACTCTCCAATCATCTGTACACACATGCAGAGAAAGAGCCCAGGTTTTTaGGGTCCATCCTTCCCACTC | + |
Preference number: 4 (lower is better) Translates to: GQAQDRTHSPIICTHMQRKSPGF*GPSFPL Trigger: GAGTGGGAAGGATGGACCGCAAAAACCTGGGCTCTT...TCTCTGCATGTGTGTACAGATGATTGGAGAGTGTGTGCGGTCTTGGGCTTGGCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000098132.11 ENSMUST00000108040.8 ENSMUST00000108041.8 ENSMUST00000108042.3 |
||
CDS-3UTR CCA 90 bp | GGTGTCAAAGAAAAGAGCTCAGACTTTCAGCTGAGACCTCCATCCACAGGGATCGGCAAACCGCTGACCTaGCCTGGACTCCAAGTACAG | + |
Preference number: 4 (lower is better) Translates to: GVKEKSSDFQLRPPSTGIGKPLT*PGLQVQ Trigger: CTGTACTTGGAGTCCAGGCCAGGTCAGCGGTTTGCC...GATCCCTGTGGATGGAGGTCTCAGCTGAAAGTCTGAGCTCTTTTCTTTGACACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000098132.11 ENSMUST00000108040.8 ENSMUST00000108041.8 ENSMUST00000108042.3 |
||
CDS-3UTR CCA 90 bp | GGCCAAGCCCAAGACCGCACACACTCTCCAATCATCTGTACACACATGCAGAGACTGACTCTCAGCTCCTaGCAGCGTCTTCTTCCTGTA | + |
Preference number: 4 (lower is better) Translates to: GQAQDRTHSPIICTHMQRLTLSS*QRLLPV Trigger: TACAGGAAGAAGACGCTGCCAGGAGCTGAGAGTCAG...TCTCTGCATGTGTGTACAGATGATTGGAGAGTGTGTGCGGTCTTGGGCTTGGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000098132.11 ENSMUST00000108040.8 ENSMUST00000108041.8 ENSMUST00000108042.3 |
||
CDS-3UTR CCA 90 bp | AAAGAAAAGAGCTCAGACTTTCAGCTGAGACCTCCATCCACAGGGATCCACTGCCGTGCTGGCACCCAGTaGGTTCACCTCGGTCACATT | + |
Preference number: 4 (lower is better) Translates to: KEKSSDFQLRPPSTGIHCRAGTQ*VHLGHI Trigger: AATGTGACCGAGGTGAACCCACTGGGTGCCAGCACG...GCAGTGGATCCCTGTGGATGGAGGTCTCAGCTGAAAGTCTGAGCTCTTTTCTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000098132.11 ENSMUST00000108040.8 ENSMUST00000108041.8 ENSMUST00000108042.3 |
||
CDS-3UTR CCA 90 bp | CCAAGACCGCACACACTCTCCAATCATCTGTACACACATGCAGAGAACTTTTGCCACCGTGGACCAGGCTaGATGCTGTGCTGGTCGGTA | + |
Preference number: 4 (lower is better) Translates to: PRPHTLSNHLYTHAENFCHRGPG*MLCWSV Trigger: TACCGACCAGCACAGCATCCAGCCTGGTCCACGGTG...GCAAAAGTTCTCTGCATGTGTGTACAGATGATTGGAGAGTGTGTGCGGTCTTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000098132.11 ENSMUST00000108040.8 ENSMUST00000108041.8 ENSMUST00000108042.3 |
||
CDS-3UTR CCA 90 bp | CCACAGGGATCCACTGCCCCGCCTCTTTCTGCCTGTCCTTTTAACCACCCAAGTCAGGTTTGGAATTCCTaGAAGCTTTTCCACCGGGAT | + |
Preference number: 4 (lower is better) Translates to: PQGSTAPPLSACPFNHPSQVWNS*KLFHRD Trigger: ATCCCGGTGGAAAAGCTTCCAGGAATTCCAAACCTG...ACTTGGGTGGTTAAAAGGACAGGCAGAAAGAGGCGGGGCAGTGGATCCCTGTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000098132.11 ENSMUST00000108040.8 ENSMUST00000108041.8 ENSMUST00000108042.3 |
||
CDS-3UTR TCA 90 bp | TTCAGCCGGCAGCAAGTTTGGAGTATAGGTGTCAAAGAAAAGAGCTCAGACTTTGCCGGGCTGTCCTCCTaGGCTACTACTGCCTCTAGC | + |
Preference number: 4 (lower is better) Translates to: FSRQQVWSIGVKEKSSDFAGLSS*ATTASS Trigger: GCTAGAGGCAGTAGTAGCTCAGGAGGACAGCCCGGC...AAAGTCTGAGCTCTTTTCTTTGACACCTATACTCCAAACTTGCTGCCGGCTGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000098132.11 ENSMUST00000108040.8 ENSMUST00000108041.8 ENSMUST00000108042.3 |
||
CDS-3UTR TCA 90 bp | GAGTATAGGTGTCAAAGAAAAGAGCTCAGACTTTCAGCTGAGACCTCCATCCACTCCAAGGGGTCCCTGTaGTCAAGTGGCCTTGGGTCC | + |
Preference number: 4 (lower is better) Translates to: EYRCQRKELRLSAETSIHSKGSL*SSGLGS Trigger: GGACCCAAGGCCACTTGATCACAGGGACCCCTTGGA...GTGGATGGAGGTCTCAGCTGAAAGTCTGAGCTCTTTTCTTTGACACCTATACTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000098132.11 ENSMUST00000108040.8 ENSMUST00000108041.8 ENSMUST00000108042.3 |
||
CDS-3UTR GCA 90 bp | GGCCAAGCCCAAGACCGCACACACTCTCCAATCATCTGTACACACATGCAGAGATCTGGCAGACATAAGTaGCTTCATCAGGGCTGTCCA | + |
Preference number: 4 (lower is better) Translates to: GQAQDRTHSPIICTHMQRSGRHK*LHQGCP Trigger: TGGACAGCCCTGATGAAGGCACTTATGTCTGCCAGA...TCTCTGCATGTGTGTACAGATGATTGGAGAGTGTGTGCGGTCTTGGGCTTGGCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000098132.11 ENSMUST00000108040.8 ENSMUST00000108041.8 ENSMUST00000108042.3 |
||
CDS-3UTR CCA 90 bp | ACGATCACAGGAACACAGACTTCTGTACACATTCCTCAGGTGGACTTCCACCTCCCAGAGTCAGGTCCCTaGAGCAGCCTTGAATCTCCA | + |
Preference number: 4 (lower is better) Translates to: TITGTQTSVHIPQVDFHLPESGP*SSLESP Trigger: TGGAGATTCAAGGCTGCTCCAGGGACCTGACTCTGG...GAGGTGGAAGTCCACCTGAGGAATGTGTACAGAAGTCTGTGTTCCTGTGATCGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000098132.11 ENSMUST00000108040.8 ENSMUST00000108041.8 ENSMUST00000108042.3 |
||
CDS-3UTR CCA 90 bp | GAAGTCCAGACAGCCTTCAGCCGGCAGCAAGTTTGGAGTATAGGTGTCAAAGAACCAGAGTCAGGTCCCTaGAGCAGCCTTGAATCTCCA | + |
Preference number: 4 (lower is better) Translates to: EVQTAFSRQQVWSIGVKEPESGP*SSLESP Trigger: TGGAGATTCAAGGCTGCTCCAGGGACCTGACTCTGG...TTCTTTGACACCTATACTCCAAACTTGCTGCCGGCTGAAGGCTGTCTGGACTTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000098132.11 ENSMUST00000108040.8 ENSMUST00000108041.8 ENSMUST00000108042.3 |
||
CDS-3UTR CCA 90 bp | TGTCAAAGAAAAGAGCTCAGACTTTCAGCTGAGACCTCCATCCACAGGGATCCAGGCAAACCGCTGACCTaGCCTGGACTCCAAGTACAG | + |
Preference number: 4 (lower is better) Translates to: CQRKELRLSAETSIHRDPGKPLT*PGLQVQ Trigger: CTGTACTTGGAGTCCAGGCCAGGTCAGCGGTTTGCC...TGGATCCCTGTGGATGGAGGTCTCAGCTGAAAGTCTGAGCTCTTTTCTTTGACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000098132.11 ENSMUST00000108040.8 ENSMUST00000108041.8 ENSMUST00000108042.3 |
||
CDS-3UTR CCA 90 bp | CTGTACACACATGCAGAGAACTTTTGCTCCCTGTCTCACATACACACACGATCACCAGTAGGCACGTGCTaGCACCCAGTGGGTTCACCT | + |
Preference number: 4 (lower is better) Translates to: LYTHAENFCSLSHIHTRSPVGTC*HPVGSP Trigger: AGGTGAACCCACTGGGTGCCAGCACGTGCCTACTGG...TGATCGTGTGTGTATGTGAGACAGGGAGCAAAAGTTCTCTGCATGTGTGTACAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000098132.11 ENSMUST00000108040.8 ENSMUST00000108041.8 ENSMUST00000108042.3 |
||
CDS-3UTR CCA 90 bp | AGGAACACAGACTTCTGTACACATTCCTCAGGTGGACTTCCACCTCAGGACATCGGCTGGATGCTGTGCTaGTCGGTATTGCAACCGGAA | + |
Preference number: 4 (lower is better) Translates to: RNTDFCTHSSGGLPPQDIGWMLC*SVLQPE Trigger: TTCCGGTTGCAATACCGACCAGCACAGCATCCAGCC...GATGTCCTGAGGTGGAAGTCCACCTGAGGAATGTGTACAGAAGTCTGTGTTCCT 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000098132.11 ENSMUST00000108040.8 ENSMUST00000108041.8 ENSMUST00000108042.3 |
||
CDS-3UTR CCA 90 bp | AGCCGGCAGCAAGTTTGGAGTATAGGTGTCAAAGAAAAGAGCTCAGACTTTCAGCAATGGGCTCCACCGTaGACCAGGCTGGATGCTGTG | + |
Preference number: 4 (lower is better) Translates to: SRQQVWSIGVKEKSSDFQQWAPP*TRLDAV Trigger: CACAGCATCCAGCCTGGTCCACGGTGGAGCCCATTG...CTGAAAGTCTGAGCTCTTTTCTTTGACACCTATACTCCAAACTTGCTGCCGGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000098132.11 ENSMUST00000108040.8 ENSMUST00000108041.8 ENSMUST00000108042.3 |
||
CDS-3UTR CCA 90 bp | GAGTATAGGTGTCAAAGAAAAGAGCTCAGACTTTCAGCTGAGACCTCCATCCACCAATGGGCTCCACCGTaGACCAGGCTGGATGCTGTG | + |
Preference number: 4 (lower is better) Translates to: EYRCQRKELRLSAETSIHQWAPP*TRLDAV Trigger: CACAGCATCCAGCCTGGTCCACGGTGGAGCCCATTG...GTGGATGGAGGTCTCAGCTGAAAGTCTGAGCTCTTTTCTTTGACACCTATACTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000098132.11 ENSMUST00000108040.8 ENSMUST00000108041.8 ENSMUST00000108042.3 |
||
CDS-3UTR CCA 90 bp | TTCAGCCGGCAGCAAGTTTGGAGTATAGGTGTCAAAGAAAAGAGCTCAGACTTTGACTCGTACCGCGTGTaGCAGCCCAGCCACAGCATC | + |
Preference number: 4 (lower is better) Translates to: FSRQQVWSIGVKEKSSDFDSYRV*QPSHSI Trigger: GATGCTGTGGCTGGGCTGCCACACGCGGTACGAGTC...AAAGTCTGAGCTCTTTTCTTTGACACCTATACTCCAAACTTGCTGCCGGCTGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000098132.11 ENSMUST00000108040.8 ENSMUST00000108041.8 ENSMUST00000108042.3 |
||
CDS-3UTR CCA 90 bp | ACACACATGCAGAGAACTTTTGCTCCCTGTCTCACATACACACACGATCACAGGGTGATCAAGTGGCCTTaGGTCCGGCTGCAAGGAAGG | + |
Preference number: 4 (lower is better) Translates to: THMQRTFAPCLTYTHDHRVIKWP*VRLQGR Trigger: CCTTCCTTGCAGCCGGACCCAAGGCCACTTGATCAC...CCTGTGATCGTGTGTGTATGTGAGACAGGGAGCAAAAGTTCTCTGCATGTGTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000098132.11 ENSMUST00000108040.8 ENSMUST00000108041.8 ENSMUST00000108042.3 |
||
CDS-3UTR CCA 90 bp | GAAGTCCAGACAGCCTTCAGCCGGCAGCAAGTTTGGAGTATAGGTGTCAAAGAATTTCCACCGGGATCATaGGTGCCAAGAGCCCAGGTT | + |
Preference number: 4 (lower is better) Translates to: EVQTAFSRQQVWSIGVKEFPPGS*VPRAQV Trigger: AACCTGGGCTCTTGGCACCCATGATCCCGGTGGAAA...TTCTTTGACACCTATACTCCAAACTTGCTGCCGGCTGAAGGCTGTCTGGACTTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000098132.11 ENSMUST00000108040.8 ENSMUST00000108041.8 ENSMUST00000108042.3 |
||
CDS-3UTR CCA 90 bp | GGGCCAAGCCCAAGACCGCACACACTCTCCAATCATCTGTACACACATGCAGAGCAGGTTTGGAATTCCTaGAAGCTTTTCCACCGGGAT | + |
Preference number: 4 (lower is better) Translates to: GPSPRPHTLSNHLYTHAEQVWNS*KLFHRD Trigger: ATCCCGGTGGAAAAGCTTCCAGGAATTCCAAACCTG...CTCTGCATGTGTGTACAGATGATTGGAGAGTGTGTGCGGTCTTGGGCTTGGCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000098132.11 ENSMUST00000108040.8 ENSMUST00000108041.8 ENSMUST00000108042.3 |
||
CDS-3UTR CCA 90 bp | CACTTCCCAGAAGGGCCAAGCCCAAGACCGCACACACTCTCCAATCATCTGTACGGTCCTCTGCAGGTTTaGAATTCCTGGAAGCTTTTC | + |
Preference number: 4 (lower is better) Translates to: HFPEGPSPRPHTLSNHLYGPLQV*NSWKLF Trigger: GAAAAGCTTCCAGGAATTCCAAACCTGCAGAGGACC...GTACAGATGATTGGAGAGTGTGTGCGGTCTTGGGCTTGGCCCTTCTGGGAAGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000098132.11 ENSMUST00000108040.8 ENSMUST00000108041.8 ENSMUST00000108042.3 |
||
CDS-3UTR CCA 90 bp | CTTCACACTTCCCAGAAGGGCCAAGCCCAAGACCGCACACACTCTCCAATCATCGGTCCTCTGCAGGTTTaGAATTCCTGGAAGCTTTTC | + |
Preference number: 4 (lower is better) Translates to: LHTSQKGQAQDRTHSPIIGPLQV*NSWKLF Trigger: GAAAAGCTTCCAGGAATTCCAAACCTGCAGAGGACC...GATGATTGGAGAGTGTGTGCGGTCTTGGGCTTGGCCCTTCTGGGAAGTGTGAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000098132.11 ENSMUST00000108040.8 ENSMUST00000108041.8 ENSMUST00000108042.3 |
||
CDS-3UTR GCA 90 bp | AGCCGGCAGCAAGTTTGGAGTATAGGTGTCAAAGAAAAGAGCTCAGACTTTCAGGTGGACCAGGCTGGATaGTGTGCTGGTCGGTATTGC | + |
Preference number: 4 (lower is better) Translates to: SRQQVWSIGVKEKSSDFQVDQAG*CAGRYC Trigger: GCAATACCGACCAGCACAGCATCCAGCCTGGTCCAC...CTGAAAGTCTGAGCTCTTTTCTTTGACACCTATACTCCAAACTTGCTGCCGGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000098132.11 ENSMUST00000108040.8 ENSMUST00000108041.8 ENSMUST00000108042.3 |
||
CDS-3UTR GCA 90 bp | GGTGTCAAAGAAAAGAGCTCAGACTTTCAGCTGAGACCTCCATCCACAGGGATCAAGAGCCCAGGTTTTTaGGGTCCATCCTTCCCACTC | + |
Preference number: 4 (lower is better) Translates to: GVKEKSSDFQLRPPSTGIKSPGF*GPSFPL Trigger: GAGTGGGAAGGATGGACCGCAAAAACCTGGGCTCTT...GATCCCTGTGGATGGAGGTCTCAGCTGAAAGTCTGAGCTCTTTTCTTTGACACC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000098132.11 ENSMUST00000108040.8 ENSMUST00000108041.8 ENSMUST00000108042.3 |
||
CDS-3UTR CCA 90 bp | CTGTACACACATGCAGAGAACTTTTGCTCCCTGTCTCACATACACACACGATCACCGAAACCAGGACACTaGAGTCCCAGCACTCACTCC | + |
Preference number: 4 (lower is better) Translates to: LYTHAENFCSLSHIHTRSPKPGH*SPSTHS Trigger: GGAGTGAGTGCTGGGACTCCAGTGTCCTGGTTTCGG...TGATCGTGTGTGTATGTGAGACAGGGAGCAAAAGTTCTCTGCATGTGTGTACAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000098132.11 ENSMUST00000108040.8 ENSMUST00000108041.8 ENSMUST00000108042.3 |
||
CDS-3UTR CCA 90 bp | ACGATCACAGGAACACAGACTTCTGTACACATTCCTCAGGTGGACTTCCACCTCCTGACTCTCAGCTCCTaGCAGCGTCTTCTTCCTGTA | + |
Preference number: 4 (lower is better) Translates to: TITGTQTSVHIPQVDFHLLTLSS*QRLLPV Trigger: TACAGGAAGAAGACGCTGCCAGGAGCTGAGAGTCAG...GAGGTGGAAGTCCACCTGAGGAATGTGTACAGAAGTCTGTGTTCCTGTGATCGT 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000098132.11 ENSMUST00000108040.8 ENSMUST00000108041.8 ENSMUST00000108042.3 |
||
CDS-3UTR CCA 90 bp | CACACACGATCACAGGAACACAGACTTCTGTACACATTCCTCAGGTGGACTTCCCTGACTCTCAGCTCCTaGCAGCGTCTTCTTCCTGTA | + |
Preference number: 4 (lower is better) Translates to: HTRSQEHRLLYTFLRWTSLTLSS*QRLLPV Trigger: TACAGGAAGAAGACGCTGCCAGGAGCTGAGAGTCAG...GGAAGTCCACCTGAGGAATGTGTACAGAAGTCTGTGTTCCTGTGATCGTGTGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000098132.11 ENSMUST00000108040.8 ENSMUST00000108041.8 ENSMUST00000108042.3 |
||
CDS-3UTR CCA 90 bp | AGCCGGCAGCAAGTTTGGAGTATAGGTGTCAAAGAAAAGAGCTCAGACTTTCAGCGTGCTGGCACCCAGTaGGTTCACCTCGGTCACATT | + |
Preference number: 4 (lower is better) Translates to: SRQQVWSIGVKEKSSDFQRAGTQ*VHLGHI Trigger: AATGTGACCGAGGTGAACCCACTGGGTGCCAGCACG...CTGAAAGTCTGAGCTCTTTTCTTTGACACCTATACTCCAAACTTGCTGCCGGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000098132.11 ENSMUST00000108040.8 ENSMUST00000108041.8 ENSMUST00000108042.3 |
||
CDS-3UTR CCA 90 bp | GAGTATAGGTGTCAAAGAAAAGAGCTCAGACTTTCAGCTGAGACCTCCATCCACCCGCAGTCCTTGGGGTaGATCAGGACGCAAGATGCT | + |
Preference number: 4 (lower is better) Translates to: EYRCQRKELRLSAETSIHPQSLG*IRTQDA Trigger: AGCATCTTGCGTCCTGATCCACCCCAAGGACTGCGG...GTGGATGGAGGTCTCAGCTGAAAGTCTGAGCTCTTTTCTTTGACACCTATACTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000098132.11 ENSMUST00000108040.8 ENSMUST00000108041.8 ENSMUST00000108042.3 |
||
CDS-3UTR CCA 90 bp | GCAAGTTTGGAGTATAGGTGTCAAAGAAAAGAGCTCAGACTTTCAGCTGAGACCCAGGGTATGTCCAGCTaGCATGCAGGCGTCTCGGGT | + |
Preference number: 4 (lower is better) Translates to: ASLEYRCQRKELRLSAETQGMSS*HAGVSG Trigger: ACCCGAGACGCCTGCATGCCAGCTGGACATACCCTG...GGTCTCAGCTGAAAGTCTGAGCTCTTTTCTTTGACACCTATACTCCAAACTTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000098132.11 ENSMUST00000108040.8 ENSMUST00000108041.8 ENSMUST00000108042.3 |
||
CDS-3UTR CCA 90 bp | AAAGAAAAGAGCTCAGACTTTCAGCTGAGACCTCCATCCACAGGGATCCACTGCTCAGCTGAAGTTCTCTaGGGTCCTCTGCAGGTTTGG | + |
Preference number: 4 (lower is better) Translates to: KEKSSDFQLRPPSTGIHCSAEVL*GPLQVW Trigger: CCAAACCTGCAGAGGACCCCAGAGAACTTCAGCTGA...GCAGTGGATCCCTGTGGATGGAGGTCTCAGCTGAAAGTCTGAGCTCTTTTCTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000098132.11 ENSMUST00000108040.8 ENSMUST00000108041.8 ENSMUST00000108042.3 |
||
CDS-3UTR GCA 90 bp | ACGATCACAGGAACACAGACTTCTGTACACATTCCTCAGGTGGACTTCCACCTCTCTGGCAGACATAAGTaGCTTCATCAGGGCTGTCCA | + |
Preference number: 4 (lower is better) Translates to: TITGTQTSVHIPQVDFHLSGRHK*LHQGCP Trigger: TGGACAGCCCTGATGAAGGCACTTATGTCTGCCAGA...GAGGTGGAAGTCCACCTGAGGAATGTGTACAGAAGTCTGTGTTCCTGTGATCGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000098132.11 ENSMUST00000108040.8 ENSMUST00000108041.8 ENSMUST00000108042.3 |
||
CDS-3UTR CCA 90 bp | GAGTATAGGTGTCAAAGAAAAGAGCTCAGACTTTCAGCTGAGACCTCCATCCACCCAGAGTCAGGTCCCTaGAGCAGCCTTGAATCTCCA | + |
Preference number: 4 (lower is better) Translates to: EYRCQRKELRLSAETSIHPESGP*SSLESP Trigger: TGGAGATTCAAGGCTGCTCCAGGGACCTGACTCTGG...GTGGATGGAGGTCTCAGCTGAAAGTCTGAGCTCTTTTCTTTGACACCTATACTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000098132.11 ENSMUST00000108040.8 ENSMUST00000108041.8 ENSMUST00000108042.3 |
||
CDS-3UTR CCA 90 bp | CCAAGACCGCACACACTCTCCAATCATCTGTACACACATGCAGAGAACTTTTGCCTGACTCTCAGCTCCTaGCAGCGTCTTCTTCCTGTA | + |
Preference number: 4 (lower is better) Translates to: PRPHTLSNHLYTHAENFCLTLSS*QRLLPV Trigger: TACAGGAAGAAGACGCTGCCAGGAGCTGAGAGTCAG...GCAAAAGTTCTCTGCATGTGTGTACAGATGATTGGAGAGTGTGTGCGGTCTTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000098132.11 ENSMUST00000108040.8 ENSMUST00000108041.8 ENSMUST00000108042.3 |
||
CDS-3UTR CCA 90 bp | TTCAGCCGGCAGCAAGTTTGGAGTATAGGTGTCAAAGAAAAGAGCTCAGACTTTCGTGCTGGCACCCAGTaGGTTCACCTCGGTCACATT | + |
Preference number: 4 (lower is better) Translates to: FSRQQVWSIGVKEKSSDFRAGTQ*VHLGHI Trigger: AATGTGACCGAGGTGAACCCACTGGGTGCCAGCACG...AAAGTCTGAGCTCTTTTCTTTGACACCTATACTCCAAACTTGCTGCCGGCTGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000098132.11 ENSMUST00000108040.8 ENSMUST00000108041.8 ENSMUST00000108042.3 |
||
CDS-3UTR CCA 90 bp | TATTTCAACTCTTCACACTTCCCAGAAGGGCCAAGCCCAAGACCGCACACACTCGGTCCTCTGCAGGTTTaGAATTCCTGGAAGCTTTTC | + |
Preference number: 4 (lower is better) Translates to: YFNSSHFPEGPSPRPHTLGPLQV*NSWKLF Trigger: GAAAAGCTTCCAGGAATTCCAAACCTGCAGAGGACC...GAGTGTGTGCGGTCTTGGGCTTGGCCCTTCTGGGAAGTGTGAAGAGTTGAAATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000098132.11 ENSMUST00000108040.8 ENSMUST00000108041.8 ENSMUST00000108042.3 |
||
CDS-3UTR GCA 90 bp | CCAAGACCGCACACACTCTCCAATCATCTGTACACACATGCAGAGAACTTTTGCTGTGCTGGTCGGTATTaGAACCGGAACTTGAGCAGA | + |
Preference number: 4 (lower is better) Translates to: PRPHTLSNHLYTHAENFCCAGRY*NRNLSR Trigger: TCTGCTCAAGTTCCGGTTGCAATACCGACCAGCACA...GCAAAAGTTCTCTGCATGTGTGTACAGATGATTGGAGAGTGTGTGCGGTCTTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000098132.11 ENSMUST00000108040.8 ENSMUST00000108041.8 ENSMUST00000108042.3 |
||
CDS-3UTR GCA 90 bp | AGCCGGCAGCAAGTTTGGAGTATAGGTGTCAAAGAAAAGAGCTCAGACTTTCAGAAGAGCCCAGGTTTTTaGGGTCCATCCTTCCCACTC | + |
Preference number: 4 (lower is better) Translates to: SRQQVWSIGVKEKSSDFQKSPGF*GPSFPL Trigger: GAGTGGGAAGGATGGACCGCAAAAACCTGGGCTCTT...CTGAAAGTCTGAGCTCTTTTCTTTGACACCTATACTCCAAACTTGCTGCCGGCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000098132.11 ENSMUST00000108040.8 ENSMUST00000108041.8 ENSMUST00000108042.3 |
||
CDS-3UTR CCA 90 bp | TTCAGCCGGCAGCAAGTTTGGAGTATAGGTGTCAAAGAAAAGAGCTCAGACTTTCCAGAGTCAGGTCCCTaGAGCAGCCTTGAATCTCCA | + |
Preference number: 4 (lower is better) Translates to: FSRQQVWSIGVKEKSSDFPESGP*SSLESP Trigger: TGGAGATTCAAGGCTGCTCCAGGGACCTGACTCTGG...AAAGTCTGAGCTCTTTTCTTTGACACCTATACTCCAAACTTGCTGCCGGCTGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000098132.11 ENSMUST00000108040.8 ENSMUST00000108041.8 ENSMUST00000108042.3 |
||
CDS-3UTR CCA 90 bp | GCAAGTTTGGAGTATAGGTGTCAAAGAAAAGAGCTCAGACTTTCAGCTGAGACCAACTTGAGCAGAAAGTaGGGTTGGCGACGCCAGGAG | + |
Preference number: 4 (lower is better) Translates to: ASLEYRCQRKELRLSAETNLSRK*GWRRQE Trigger: CTCCTGGCGTCGCCAACCCCACTTTCTGCTCAAGTT...GGTCTCAGCTGAAAGTCTGAGCTCTTTTCTTTGACACCTATACTCCAAACTTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000098132.11 ENSMUST00000108040.8 ENSMUST00000108041.8 ENSMUST00000108042.3 |
||
CDS-3UTR CCA 90 bp | AAAGAAAAGAGCTCAGACTTTCAGCTGAGACCTCCATCCACAGGGATCCACTGCCAGGTTTGGAATTCCTaGAAGCTTTTCCACCGGGAT | + |
Preference number: 4 (lower is better) Translates to: KEKSSDFQLRPPSTGIHCQVWNS*KLFHRD Trigger: ATCCCGGTGGAAAAGCTTCCAGGAATTCCAAACCTG...GCAGTGGATCCCTGTGGATGGAGGTCTCAGCTGAAAGTCTGAGCTCTTTTCTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000098132.11 ENSMUST00000108040.8 ENSMUST00000108041.8 ENSMUST00000108042.3 |
||
3UTR CAA 72 bp | ATCGGAAGTCCAGACAGCCTTCAGCCGGCAGCAAGTTaGGAGTATAGGTGTCAAAGAAAAGAGCTCAGACTT | + |
Preference number: 4 (lower is better) Translates to: IGSPDSLQPAAS*EYRCQRKELRL Trigger: AAGTCTGAGCTCTTTTCTTTGACACCTATACTCCAAACTTGCTGCCGGCTGAAGGCTGTCTGGACTTCCGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000098132.11 ENSMUST00000108040.8 ENSMUST00000108041.8 ENSMUST00000108042.3 |
||
CDS-3UTR CCA 90 bp | TTCAGCCGGCAGCAAGTTTGGAGTATAGGTGTCAAAGAAAAGAGCTCAGACTTTTCAGCTGAAGTTCTCTaGGGTCCTCTGCAGGTTTGG | + |
Preference number: 4 (lower is better) Translates to: FSRQQVWSIGVKEKSSDFSAEVL*GPLQVW Trigger: CCAAACCTGCAGAGGACCCCAGAGAACTTCAGCTGA...AAAGTCTGAGCTCTTTTCTTTGACACCTATACTCCAAACTTGCTGCCGGCTGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000098132.11 ENSMUST00000108040.8 ENSMUST00000108041.8 ENSMUST00000108042.3 |
||
CDS-3UTR CCA 90 bp | CTGTACACACATGCAGAGAACTTTTGCTCCCTGTCTCACATACACACACGATCACAGGTTTGGAATTCCTaGAAGCTTTTCCACCGGGAT | + |
Preference number: 4 (lower is better) Translates to: LYTHAENFCSLSHIHTRSQVWNS*KLFHRD Trigger: ATCCCGGTGGAAAAGCTTCCAGGAATTCCAAACCTG...TGATCGTGTGTGTATGTGAGACAGGGAGCAAAAGTTCTCTGCATGTGTGTACAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000098132.11 ENSMUST00000108040.8 ENSMUST00000108041.8 ENSMUST00000108042.3 |
||
CDS TCA 90 bp | GGGTCCGGCTGCAAGGAAGGCCTTGCAGGAGCCGGGCTGTCCTCCTaGGCTACTACTGCCTCTAGCTGCTGTCCGTGTCCCTGGCTCCAA | + |
Preference number: 5 (lower is better) Translates to: GSGCKEGLAGAGLSS*ATTASSCCPCPWLQ Trigger: TTGGAGCCAGGGACACGGACAGCAGCTAGAGGCAGTAGTAGCTCAGGAGGACAGCCCGGCTCCTGCAAGGCCTTCCTTGCAGCCGGACCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000098132.11 ENSMUST00000108040.8 ENSMUST00000108041.8 ENSMUST00000108042.3 |
||
CDS CCA 90 bp | GCAGAAAGTGGGGTTGGCGACGCCAGGAGGCAGGGTATGTCCAGCTaGCATGCAGGCGTCTCGGGTAACCAGGTACGGATTCCACCCGCA | + |
Preference number: 5 (lower is better) Translates to: AESGVGDARRQGMSS*HAGVSGNQVRIPPA Trigger: TGCGGGTGGAATCCGTACCTGGTTACCCGAGACGCCTGCATGCCAGCTGGACATACCCTGCCTCCTGGCGTCGCCAACCCCACTTTCTGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000098132.11 ENSMUST00000108040.8 ENSMUST00000108041.8 ENSMUST00000108042.3 |
||
CDS CCA 90 bp | TATCTCATCCTGCAGGGGACCAGTGCTAGGAGTACCCCAGGCCTCTaGGCTCCAGGCGCTCCAGGTGCCAGCATCCAGAAAGTCCCTGGC | + |
Preference number: 5 (lower is better) Translates to: YLILQGTSARSTPGL*APGAPGASIQKVPG Trigger: GCCAGGGACTTTCTGGATGCTGGCACCTGGAGCGCCTGGAGCCCAGAGGCCTGGGGTACTCCTAGCACTGGTCCCCTGCAGGATGAGATA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000098132.11 ENSMUST00000108040.8 ENSMUST00000108041.8 ENSMUST00000108042.3 |
||
CDS-3UTR CAA 90 bp | GAGCTCAGACTTTCAGCTGAGACCTCCATCCACAGGGATCCACTGCCCCGCCTCGAGCAGAAAGTGGGGTaGGCGACGCCAGGAGGCAGG | + |
Preference number: 5 (lower is better) Translates to: ELRLSAETSIHRDPLPRLEQKVG*ATPGGR Trigger: CCTGCCTCCTGGCGTCGCCAACCCCACTTTCTGCTC...GAGGCGGGGCAGTGGATCCCTGTGGATGGAGGTCTCAGCTGAAAGTCTGAGCTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000098132.11 ENSMUST00000108040.8 ENSMUST00000108041.8 ENSMUST00000108042.3 |
||
CDS-3UTR CAA 90 bp | AGCTCAGACTTTCAGCTGAGACCTCCATCCACAGGGATCCACTGCCCCGCCTCTCACGGGCCTGCCAGGTaGTCCATACTGGACCCCTGG | + |
Preference number: 5 (lower is better) Translates to: SSDFQLRPPSTGIHCPASHGPAR*SILDPW Trigger: CCAGGGGTCCAGTATGGACAACCTGGCAGGCCCGTG...AGAGGCGGGGCAGTGGATCCCTGTGGATGGAGGTCTCAGCTGAAAGTCTGAGCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000098132.11 ENSMUST00000108040.8 ENSMUST00000108041.8 ENSMUST00000108042.3 |
||
CDS-3UTR CAA 90 bp | TTTCAGCTGAGACCTCCATCCACAGGGATCCACTGCCCCGCCTCTTTCTGCCTGCACGGGCCTGCCAGGTaGTCCATACTGGACCCCTGG | + |
Preference number: 5 (lower is better) Translates to: FQLRPPSTGIHCPASFCLHGPAR*SILDPW Trigger: CCAGGGGTCCAGTATGGACAACCTGGCAGGCCCGTG...CAGGCAGAAAGAGGCGGGGCAGTGGATCCCTGTGGATGGAGGTCTCAGCTGAAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000098132.11 ENSMUST00000108040.8 ENSMUST00000108041.8 ENSMUST00000108042.3 |
||
CDS-3UTR CAA 90 bp | GGACTTCCACCTCAGGACATCGGAAGTCCAGACAGCCTTCAGCCGGCAGCAAGTCACGGGCCTGCCAGGTaGTCCATACTGGACCCCTGG | + |
Preference number: 5 (lower is better) Translates to: GLPPQDIGSPDSLQPAASHGPAR*SILDPW Trigger: CCAGGGGTCCAGTATGGACAACCTGGCAGGCCCGTG...ACTTGCTGCCGGCTGAAGGCTGTCTGGACTTCCGATGTCCTGAGGTGGAAGTCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000098132.11 ENSMUST00000108040.8 ENSMUST00000108041.8 ENSMUST00000108042.3 |
||
CDS GCA 90 bp | TCTAGCTGCTGTCCGTGTCCCTGGCTCCAATCAGGTATCTCATCCTaGAGGGGACCAGTGCTAGGAGTACCCCAGGCCTCTGGGCTCCAG | + |
Preference number: 5 (lower is better) Translates to: SSCCPCPWLQSGISS*RGPVLGVPQASGLQ Trigger: CTGGAGCCCAGAGGCCTGGGGTACTCCTAGCACTGGTCCCCTGCAGGATGAGATACCTGATTGGAGCCAGGGACACGGACAGCAGCTAGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000098132.11 ENSMUST00000108040.8 ENSMUST00000108041.8 ENSMUST00000108042.3 |
||
CDS-3UTR CAA 90 bp | ACTTCCCAGAAGGGCCAAGCCCAAGACCGCACACACTCTCCAATCATCTGTACAGAGCAGAAAGTGGGGTaGGCGACGCCAGGAGGCAGG | + |
Preference number: 5 (lower is better) Translates to: TSQKGQAQDRTHSPIICTEQKVG*ATPGGR Trigger: CCTGCCTCCTGGCGTCGCCAACCCCACTTTCTGCTC...TGTACAGATGATTGGAGAGTGTGTGCGGTCTTGGGCTTGGCCCTTCTGGGAAGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000098132.11 ENSMUST00000108040.8 ENSMUST00000108041.8 ENSMUST00000108042.3 |
||
CDS-3UTR CAA 90 bp | CAGAAGGGCCAAGCCCAAGACCGCACACACTCTCCAATCATCTGTACACACATGGAGCAGAAAGTGGGGTaGGCGACGCCAGGAGGCAGG | + |
Preference number: 5 (lower is better) Translates to: QKGQAQDRTHSPIICTHMEQKVG*ATPGGR Trigger: CCTGCCTCCTGGCGTCGCCAACCCCACTTTCTGCTC...CATGTGTGTACAGATGATTGGAGAGTGTGTGCGGTCTTGGGCTTGGCCCTTCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000098132.11 ENSMUST00000108040.8 ENSMUST00000108041.8 ENSMUST00000108042.3 |
||
CDS-3UTR CAA 90 bp | GAGCTCAGACTTTCAGCTGAGACCTCCATCCACAGGGATCCACTGCCCCGCCTCCAAGAGCCCAGGTTTTaGCGGTCCATCCTTCCCACT | + |
Preference number: 5 (lower is better) Translates to: ELRLSAETSIHRDPLPRLQEPRF*RSILPT Trigger: AGTGGGAAGGATGGACCGCAAAAACCTGGGCTCTTG...GAGGCGGGGCAGTGGATCCCTGTGGATGGAGGTCTCAGCTGAAAGTCTGAGCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000098132.11 ENSMUST00000108040.8 ENSMUST00000108041.8 ENSMUST00000108042.3 |
||
CDS GCA 90 bp | AGACTTCAGGACGTGCTGGGGGAAAGCCCAGCTTCAGGGTCACCATaGCCCCTGATACACCATCCAGGGTCTGGCAGACATAAGTGCCTT | + |
Preference number: 5 (lower is better) Translates to: RLQDVLGESPASGSP*PLIHHPGSGRHKCL Trigger: AAGGCACTTATGTCTGCCAGACCCTGGATGGTGTATCAGGGGGCATGGTGACCCTGAAGCTGGGCTTTCCCCCAGCACGTCCTGAAGTCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000098132.11 ENSMUST00000108040.8 ENSMUST00000108041.8 ENSMUST00000108042.3 |
||
CDS GCA 90 bp | GTACGGATTCCACCCGCAGTCCTTGGGGTGGATCAGGACGCAAGATaGTCTGTAATCTCACATCCAGTAGGCACGTGCTGGCACCCAGTG | + |
Preference number: 5 (lower is better) Translates to: VRIPPAVLGVDQDAR*SVISHPVGTCWHPV Trigger: CACTGGGTGCCAGCACGTGCCTACTGGATGTGAGATTACAGAGCATCTTGCGTCCTGATCCACCCCAAGGACTGCGGGTGGAATCCGTAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000098132.11 ENSMUST00000108040.8 ENSMUST00000108041.8 ENSMUST00000108042.3 |
||
CDS CCA 90 bp | GGTGCCAGCATCCAGAAAGTCCCTGGCACTGACTCGTACCGCGTGTaGCAGCCCAGCCACAGCATCTGTTATCACTTCCTCCAAGCCAAT | + |
Preference number: 5 (lower is better) Translates to: GASIQKVPGTDSYRV*QPSHSICYHFLQAN Trigger: ATTGGCTTGGAGGAAGTGATAACAGATGCTGTGGCTGGGCTGCCACACGCGGTACGAGTCAGTGCCAGGGACTTTCTGGATGCTGGCACC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000098132.11 ENSMUST00000108040.8 ENSMUST00000108041.8 ENSMUST00000108042.3 |
||
CDS-3UTR CAA 90 bp | AAGAGCTCAGACTTTCAGCTGAGACCTCCATCCACAGGGATCCACTGCCCCGCCCTGTGCTGGTCGGTATaGCAACCGGAACTTGAGCAG | + |
Preference number: 5 (lower is better) Translates to: KSSDFQLRPPSTGIHCPALCWSV*QPELEQ Trigger: CTGCTCAAGTTCCGGTTGCAATACCGACCAGCACAG...GGCGGGGCAGTGGATCCCTGTGGATGGAGGTCTCAGCTGAAAGTCTGAGCTCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000098132.11 ENSMUST00000108040.8 ENSMUST00000108041.8 ENSMUST00000108042.3 |
||
CDS-3UTR CAA 90 bp | AAGAGCTCAGACTTTCAGCTGAGACCTCCATCCACAGGGATCCACTGCCCCGCCCAAGAGCCCAGGTTTTaGCGGTCCATCCTTCCCACT | + |
Preference number: 5 (lower is better) Translates to: KSSDFQLRPPSTGIHCPAQEPRF*RSILPT Trigger: AGTGGGAAGGATGGACCGCAAAAACCTGGGCTCTTG...GGCGGGGCAGTGGATCCCTGTGGATGGAGGTCTCAGCTGAAAGTCTGAGCTCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000098132.11 ENSMUST00000108040.8 ENSMUST00000108041.8 ENSMUST00000108042.3 |
||
CDS GCA 90 bp | ATCACTTCCTCCAAGCCAATGGGCTCCACCGTGGACCAGGCTGGATaGTGTGCTGGTCGGTATTGCAACCGGAACTTGAGCAGAAAGTGG | + |
Preference number: 5 (lower is better) Translates to: ITSSKPMGSTVDQAG*CAGRYCNRNLSRKW Trigger: CCACTTTCTGCTCAAGTTCCGGTTGCAATACCGACCAGCACAGCATCCAGCCTGGTCCACGGTGGAGCCCATTGGCTTGGAGGAAGTGAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000098132.11 ENSMUST00000108040.8 ENSMUST00000108041.8 ENSMUST00000108042.3 |
||
CDS-3UTR CAA 90 bp | ATCACAGGAACACAGACTTCTGTACACATTCCTCAGGTGGACTTCCACCTCAGGGAGCAGAAAGTGGGGTaGGCGACGCCAGGAGGCAGG | + |
Preference number: 5 (lower is better) Translates to: ITGTQTSVHIPQVDFHLREQKVG*ATPGGR Trigger: CCTGCCTCCTGGCGTCGCCAACCCCACTTTCTGCTC...CCTGAGGTGGAAGTCCACCTGAGGAATGTGTACAGAAGTCTGTGTTCCTGTGAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000098132.11 ENSMUST00000108040.8 ENSMUST00000108041.8 ENSMUST00000108042.3 |
||
CDS GCA 90 bp | CTGCAGGTTTGGAATTCCTGGAAGCTTTTCCACCGGGATCATGGGTaGCAAGAGCCCAGGTTTTTGCGGTCCATCCTTCCCACTCCGTCT | + |
Preference number: 5 (lower is better) Translates to: LQVWNSWKLFHRDHG*QEPRFLRSILPTPS Trigger: AGACGGAGTGGGAAGGATGGACCGCAAAAACCTGGGCTCTTGGCACCCATGATCCCGGTGGAAAAGCTTCCAGGAATTCCAAACCTGCAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000098132.11 ENSMUST00000108040.8 ENSMUST00000108041.8 ENSMUST00000108042.3 |
||
CDS CCA 90 bp | TCCTCTGCAGGTTTGGAATTCCTGGAAGCTTTTCCACCGGGATCATaGGTGCCAAGAGCCCAGGTTTTTGCGGTCCATCCTTCCCACTCC | + |
Preference number: 5 (lower is better) Translates to: SSAGLEFLEAFPPGS*VPRAQVFAVHPSHS Trigger: GGAGTGGGAAGGATGGACCGCAAAAACCTGGGCTCTTGGCACCCATGATCCCGGTGGAAAAGCTTCCAGGAATTCCAAACCTGCAGAGGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000098132.11 ENSMUST00000108040.8 ENSMUST00000108041.8 ENSMUST00000108042.3 |
||
CDS-3UTR CAA 90 bp | CCAAGACCGCACACACTCTCCAATCATCTGTACACACATGCAGAGAACTTTTGCCACGGGCCTGCCAGGTaGTCCATACTGGACCCCTGG | + |
Preference number: 5 (lower is better) Translates to: PRPHTLSNHLYTHAENFCHGPAR*SILDPW Trigger: CCAGGGGTCCAGTATGGACAACCTGGCAGGCCCGTG...GCAAAAGTTCTCTGCATGTGTGTACAGATGATTGGAGAGTGTGTGCGGTCTTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000098132.11 ENSMUST00000108040.8 ENSMUST00000108041.8 ENSMUST00000108042.3 |
||
CDS-3UTR CAA 90 bp | GGACTTCCACCTCAGGACATCGGAAGTCCAGACAGCCTTCAGCCGGCAGCAAGTGGGTCCTCTGCAGGTTaGGAATTCCTGGAAGCTTTT | + |
Preference number: 5 (lower is better) Translates to: GLPPQDIGSPDSLQPAASGSSAG*EFLEAF Trigger: AAAAGCTTCCAGGAATTCCAAACCTGCAGAGGACCC...ACTTGCTGCCGGCTGAAGGCTGTCTGGACTTCCGATGTCCTGAGGTGGAAGTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000098132.11 ENSMUST00000108040.8 ENSMUST00000108041.8 ENSMUST00000108042.3 |
||
CDS-3UTR CAA 90 bp | TCAGGTGGACTTCCACCTCAGGACATCGGAAGTCCAGACAGCCTTCAGCCGGCAGGGTCCTCTGCAGGTTaGGAATTCCTGGAAGCTTTT | + |
Preference number: 5 (lower is better) Translates to: SGGLPPQDIGSPDSLQPAGSSAG*EFLEAF Trigger: AAAAGCTTCCAGGAATTCCAAACCTGCAGAGGACCC...TGCCGGCTGAAGGCTGTCTGGACTTCCGATGTCCTGAGGTGGAAGTCCACCTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000098132.11 ENSMUST00000108040.8 ENSMUST00000108041.8 ENSMUST00000108042.3 |
||
CDS-3UTR CAA 90 bp | CAGAAGGGCCAAGCCCAAGACCGCACACACTCTCCAATCATCTGTACACACATGCAAGAGCCCAGGTTTTaGCGGTCCATCCTTCCCACT | + |
Preference number: 5 (lower is better) Translates to: QKGQAQDRTHSPIICTHMQEPRF*RSILPT Trigger: AGTGGGAAGGATGGACCGCAAAAACCTGGGCTCTTG...CATGTGTGTACAGATGATTGGAGAGTGTGTGCGGTCTTGGGCTTGGCCCTTCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000098132.11 ENSMUST00000108040.8 ENSMUST00000108041.8 ENSMUST00000108042.3 |
||
CDS-3UTR CAA 90 bp | CACAGGGATCCACTGCCCCGCCTCTTTCTGCCTGTCCTTTTAACCACCCAAGTCGGGTCCTCTGCAGGTTaGGAATTCCTGGAAGCTTTT | + |
Preference number: 5 (lower is better) Translates to: HRDPLPRLFLPVLLTTQVGSSAG*EFLEAF Trigger: AAAAGCTTCCAGGAATTCCAAACCTGCAGAGGACCC...GACTTGGGTGGTTAAAAGGACAGGCAGAAAGAGGCGGGGCAGTGGATCCCTGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000098132.11 ENSMUST00000108040.8 ENSMUST00000108041.8 ENSMUST00000108042.3 |
||
CDS-3UTR CAA 90 bp | ATCACAGGAACACAGACTTCTGTACACATTCCTCAGGTGGACTTCCACCTCAGGGTCCCTGGAGCAGCCTaGAATCTCCATCCCGAAACC | + |
Preference number: 5 (lower is better) Translates to: ITGTQTSVHIPQVDFHLRVPGAA*NLHPET Trigger: GGTTTCGGGATGGAGATTCAAGGCTGCTCCAGGGAC...CCTGAGGTGGAAGTCCACCTGAGGAATGTGTACAGAAGTCTGTGTTCCTGTGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000098132.11 ENSMUST00000108040.8 ENSMUST00000108041.8 ENSMUST00000108042.3 |
||
CDS-3UTR CAA 90 bp | ATCACAGGAACACAGACTTCTGTACACATTCCTCAGGTGGACTTCCACCTCAGGCTGTGCTGGTCGGTATaGCAACCGGAACTTGAGCAG | + |
Preference number: 5 (lower is better) Translates to: ITGTQTSVHIPQVDFHLRLCWSV*QPELEQ Trigger: CTGCTCAAGTTCCGGTTGCAATACCGACCAGCACAG...CCTGAGGTGGAAGTCCACCTGAGGAATGTGTACAGAAGTCTGTGTTCCTGTGAT 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000098132.11 ENSMUST00000108040.8 ENSMUST00000108041.8 ENSMUST00000108042.3 |
||
CDS-3UTR CAA 90 bp | TCTTCACACTTCCCAGAAGGGCCAAGCCCAAGACCGCACACACTCTCCAATCATGGGTCCTCTGCAGGTTaGGAATTCCTGGAAGCTTTT | + |
Preference number: 5 (lower is better) Translates to: SSHFPEGPSPRPHTLSNHGSSAG*EFLEAF Trigger: AAAAGCTTCCAGGAATTCCAAACCTGCAGAGGACCC...ATGATTGGAGAGTGTGTGCGGTCTTGGGCTTGGCCCTTCTGGGAAGTGTGAAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000098132.11 ENSMUST00000108040.8 ENSMUST00000108041.8 ENSMUST00000108042.3 |
||
CDS-3UTR CAA 90 bp | CCAAGACCGCACACACTCTCCAATCATCTGTACACACATGCAGAGAACTTTTGCCTGTGCTGGTCGGTATaGCAACCGGAACTTGAGCAG | + |
Preference number: 5 (lower is better) Translates to: PRPHTLSNHLYTHAENFCLCWSV*QPELEQ Trigger: CTGCTCAAGTTCCGGTTGCAATACCGACCAGCACAG...GCAAAAGTTCTCTGCATGTGTGTACAGATGATTGGAGAGTGTGTGCGGTCTTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000098132.11 ENSMUST00000108040.8 ENSMUST00000108041.8 ENSMUST00000108042.3 |
||
CDS-3UTR CAA 90 bp | CTGTACACACATGCAGAGAACTTTTGCTCCCTGTCTCACATACACACACGATCACTGTGCTGGTCGGTATaGCAACCGGAACTTGAGCAG | + |
Preference number: 5 (lower is better) Translates to: LYTHAENFCSLSHIHTRSLCWSV*QPELEQ Trigger: CTGCTCAAGTTCCGGTTGCAATACCGACCAGCACAG...TGATCGTGTGTGTATGTGAGACAGGGAGCAAAAGTTCTCTGCATGTGTGTACAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000098132.11 ENSMUST00000108040.8 ENSMUST00000108041.8 ENSMUST00000108042.3 |
||
CDS-3UTR CAA 90 bp | GCAAGTTTGGAGTATAGGTGTCAAAGAAAAGAGCTCAGACTTTCAGCTGAGACCCAAGAGCCCAGGTTTTaGCGGTCCATCCTTCCCACT | + |
Preference number: 5 (lower is better) Translates to: ASLEYRCQRKELRLSAETQEPRF*RSILPT Trigger: AGTGGGAAGGATGGACCGCAAAAACCTGGGCTCTTG...GGTCTCAGCTGAAAGTCTGAGCTCTTTTCTTTGACACCTATACTCCAAACTTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000098132.11 ENSMUST00000108040.8 ENSMUST00000108041.8 ENSMUST00000108042.3 |
||
CDS CCA 72 bp | GGGGTTGGCGACGCCAGGAGGCAGGGTATGTCCAGCTaGCATGCAGGCGTCTCGGGTAACCAGGTACGGATT | + |
Preference number: 6 (lower is better) Translates to: GVGDARRQGMSS*HAGVSGNQVRI Trigger: AATCCGTACCTGGTTACCCGAGACGCCTGCATGCCAGCTGGACATACCCTGCCTCCTGGCGTCGCCAACCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000098132.11 ENSMUST00000108040.8 ENSMUST00000108041.8 ENSMUST00000108042.3 |
||
CDS TCA 72 bp | TGCAAGGAAGGCCTTGCAGGAGCCGGGCTGTCCTCCTaGGCTACTACTGCCTCTAGCTGCTGTCCGTGTCCC | + |
Preference number: 6 (lower is better) Translates to: CKEGLAGAGLSS*ATTASSCCPCP Trigger: GGGACACGGACAGCAGCTAGAGGCAGTAGTAGCTCAGGAGGACAGCCCGGCTCCTGCAAGGCCTTCCTTGCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000098132.11 ENSMUST00000108040.8 ENSMUST00000108041.8 ENSMUST00000108042.3 |
||
CDS GCA 72 bp | ATCAAGTGGCCTTGGGTCCGGCTGCAAGGAAGGCCTTaGAGGAGCCGGGCTGTCCTCCTGAGCTACTACTGC | + |
Preference number: 6 (lower is better) Translates to: IKWPWVRLQGRP*RSRAVLLSYYC Trigger: GCAGTAGTAGCTCAGGAGGACAGCCCGGCTCCTGCAAGGCCTTCCTTGCAGCCGGACCCAAGGCCACTTGAT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000098132.11 ENSMUST00000108040.8 ENSMUST00000108041.8 ENSMUST00000108042.3 |
||
CDS CCA 72 bp | TACTTGCTCCAAGGGGTCCCTGTGATCAAGTGGCCTTaGGTCCGGCTGCAAGGAAGGCCTTGCAGGAGCCGG | + |
Preference number: 6 (lower is better) Translates to: YLLQGVPVIKWP*VRLQGRPCRSR Trigger: CCGGCTCCTGCAAGGCCTTCCTTGCAGCCGGACCCAAGGCCACTTGATCACAGGGACCCCTTGGAGCAAGTA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000098132.11 ENSMUST00000108040.8 ENSMUST00000108041.8 ENSMUST00000108042.3 |
||
CDS CAA 72 bp | CTACTTGCTCCAAGGGGTCCCTGTGATCAAGTGGCCTaGGGTCCGGCTGCAAGGAAGGCCTTGCAGGAGCCG | + |
Preference number: 6 (lower is better) Translates to: LLAPRGPCDQVA*GPAARKALQEP Trigger: CGGCTCCTGCAAGGCCTTCCTTGCAGCCGGACCCAAGGCCACTTGATCACAGGGACCCCTTGGAGCAAGTAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000098132.11 ENSMUST00000108040.8 ENSMUST00000108041.8 ENSMUST00000108042.3 |
||
CDS CCA 72 bp | ATAGTCTACCGCTTGGCAGGAGACTTCAGGACGTGCTaGGGGAAAGCCCAGCTTCAGGGTCACCATGCCCCC | + |
Preference number: 6 (lower is better) Translates to: IVYRLAGDFRTC*GKAQLQGHHAP Trigger: GGGGGCATGGTGACCCTGAAGCTGGGCTTTCCCCCAGCACGTCCTGAAGTCTCCTGCCAAGCGGTAGACTAT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000098132.11 ENSMUST00000108040.8 ENSMUST00000108041.8 ENSMUST00000108042.3 |
||
CDS CCA 72 bp | CACAGCTACTTGCTCCAAGGGGTCCCTGTGATCAAGTaGCCTTGGGTCCGGCTGCAAGGAAGGCCTTGCAGG | + |
Preference number: 6 (lower is better) Translates to: HSYLLQGVPVIK*PWVRLQGRPCR Trigger: CCTGCAAGGCCTTCCTTGCAGCCGGACCCAAGGCCACTTGATCACAGGGACCCCTTGGAGCAAGTAGCTGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000098132.11 ENSMUST00000108040.8 ENSMUST00000108041.8 ENSMUST00000108042.3 |
||
CDS TCA 72 bp | GACGCTAACACAGCTACTTGCTCCAAGGGGTCCCTGTaGTCAAGTGGCCTTGGGTCCGGCTGCAAGGAAGGC | + |
Preference number: 6 (lower is better) Translates to: DANTATCSKGSL*SSGLGSGCKEG Trigger: GCCTTCCTTGCAGCCGGACCCAAGGCCACTTGATCACAGGGACCCCTTGGAGCAAGTAGCTGTGTTAGCGTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000098132.11 ENSMUST00000108040.8 ENSMUST00000108041.8 ENSMUST00000108042.3 |
||
CDS GCA 72 bp | TCCAAGCCAATGGGCTCCACCGTGGACCAGGCTGGATaGTGTGCTGGTCGGTATTGCAACCGGAACTTGAGC | + |
Preference number: 6 (lower is better) Translates to: SKPMGSTVDQAG*CAGRYCNRNLS Trigger: GCTCAAGTTCCGGTTGCAATACCGACCAGCACAGCATCCAGCCTGGTCCACGGTGGAGCCCATTGGCTTGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000098132.11 ENSMUST00000108040.8 ENSMUST00000108041.8 ENSMUST00000108042.3 |
||
CDS CAA 72 bp | CACGTGCTGGCACCCAGTGGGTTCACCTCGGTCACATaGATCCGGTACTCACTCCAGAACTCTGCCCCATGG | + |
Preference number: 6 (lower is better) Translates to: HVLAPSGFTSVT*IRYSLQNSAPW Trigger: CCATGGGGCAGAGTTCTGGAGTGAGTACCGGATCAATGTGACCGAGGTGAACCCACTGGGTGCCAGCACGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000098132.11 ENSMUST00000108040.8 ENSMUST00000108041.8 ENSMUST00000108042.3 |
||
CDS CAA 72 bp | TCGGTATTGCAACCGGAACTTGAGCAGAAAGTGGGGTaGGCGACGCCAGGAGGCAGGGTATGTCCAGCTGGC | + |
Preference number: 6 (lower is better) Translates to: SVLQPELEQKVG*ATPGGRVCPAG Trigger: GCCAGCTGGACATACCCTGCCTCCTGGCGTCGCCAACCCCACTTTCTGCTCAAGTTCCGGTTGCAATACCGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000098132.11 ENSMUST00000108040.8 ENSMUST00000108041.8 ENSMUST00000108042.3 |
||
CDS CAA 72 bp | GCTGGATGCTGTGCTGGTCGGTATTGCAACCGGAACTaGAGCAGAAAGTGGGGTTGGCGACGCCAGGAGGCA | + |
Preference number: 6 (lower is better) Translates to: AGCCAGRYCNRN*SRKWGWRRQEA Trigger: TGCCTCCTGGCGTCGCCAACCCCACTTTCTGCTCAAGTTCCGGTTGCAATACCGACCAGCACAGCATCCAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000098132.11 ENSMUST00000108040.8 ENSMUST00000108041.8 ENSMUST00000108042.3 |
||
CDS CAA 72 bp | CACCGTGGACCAGGCTGGATGCTGTGCTGGTCGGTATaGCAACCGGAACTTGAGCAGAAAGTGGGGTTGGCG | + |
Preference number: 6 (lower is better) Translates to: HRGPGWMLCWSV*QPELEQKVGLA Trigger: CGCCAACCCCACTTTCTGCTCAAGTTCCGGTTGCAATACCGACCAGCACAGCATCCAGCCTGGTCCACGGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000098132.11 ENSMUST00000108040.8 ENSMUST00000108041.8 ENSMUST00000108042.3 |
||
CDS CAA 72 bp | TTCCACCGGGATCATGGGTGCCAAGAGCCCAGGTTTTaGCGGTCCATCCTTCCCACTCCGTCTCAGCCTCAG | + |
Preference number: 6 (lower is better) Translates to: FHRDHGCQEPRF*RSILPTPSQPQ Trigger: CTGAGGCTGAGACGGAGTGGGAAGGATGGACCGCAAAAACCTGGGCTCTTGGCACCCATGATCCCGGTGGAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000098132.11 ENSMUST00000108040.8 ENSMUST00000108041.8 ENSMUST00000108042.3 |
||
CDS GCA 72 bp | CCACCCGCAGTCCTTGGGGTGGATCAGGACGCAAGATaGTCTGTAATCTCACATCCAGTAGGCACGTGCTGG | + |
Preference number: 6 (lower is better) Translates to: PPAVLGVDQDAR*SVISHPVGTCW Trigger: CCAGCACGTGCCTACTGGATGTGAGATTACAGAGCATCTTGCGTCCTGATCCACCCCAAGGACTGCGGGTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000098132.11 ENSMUST00000108040.8 ENSMUST00000108041.8 ENSMUST00000108042.3 |
||
CDS GCA 72 bp | ACCGTGGACCAGGCTGGATGCTGTGCTGGTCGGTATTaGAACCGGAACTTGAGCAGAAAGTGGGGTTGGCGA | + |
Preference number: 6 (lower is better) Translates to: TVDQAGCCAGRY*NRNLSRKWGWR Trigger: TCGCCAACCCCACTTTCTGCTCAAGTTCCGGTTGCAATACCGACCAGCACAGCATCCAGCCTGGTCCACGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000098132.11 ENSMUST00000108040.8 ENSMUST00000108041.8 ENSMUST00000108042.3 |
||
CDS CCA 72 bp | ATCCAGAAAGTCCCTGGCACTGACTCGTACCGCGTGTaGCAGCCCAGCCACAGCATCTGTTATCACTTCCTC | + |
Preference number: 6 (lower is better) Translates to: IQKVPGTDSYRV*QPSHSICYHFL Trigger: GAGGAAGTGATAACAGATGCTGTGGCTGGGCTGCCACACGCGGTACGAGTCAGTGCCAGGGACTTTCTGGAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000098132.11 ENSMUST00000108040.8 ENSMUST00000108041.8 ENSMUST00000108042.3 |
||
CDS CAA 72 bp | TGTGTCCTAACCCAGAGTCAGGTCCCTGGAGCAGCCTaGAATCTCCATCCCGAAACCAGGACACTGGAGTCC | + |
Preference number: 6 (lower is better) Translates to: CVLTQSQVPGAA*NLHPETRTLES Trigger: GGACTCCAGTGTCCTGGTTTCGGGATGGAGATTCAAGGCTGCTCCAGGGACCTGACTCTGGGTTAGGACACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000098132.11 ENSMUST00000108040.8 ENSMUST00000108041.8 ENSMUST00000108042.3 |
||
CDS GCA 72 bp | TGGAATTCCTGGAAGCTTTTCCACCGGGATCATGGGTaGCAAGAGCCCAGGTTTTTGCGGTCCATCCTTCCC | + |
Preference number: 6 (lower is better) Translates to: WNSWKLFHRDHG*QEPRFLRSILP Trigger: GGGAAGGATGGACCGCAAAAACCTGGGCTCTTGGCACCCATGATCCCGGTGGAAAAGCTTCCAGGAATTCCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000098132.11 ENSMUST00000108040.8 ENSMUST00000108041.8 ENSMUST00000108042.3 |
||
CDS CCA 72 bp | GGTTTGGAATTCCTGGAAGCTTTTCCACCGGGATCATaGGTGCCAAGAGCCCAGGTTTTTGCGGTCCATCCT | + |
Preference number: 6 (lower is better) Translates to: GLEFLEAFPPGS*VPRAQVFAVHP Trigger: AGGATGGACCGCAAAAACCTGGGCTCTTGGCACCCATGATCCCGGTGGAAAAGCTTCCAGGAATTCCAAACC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000098132.11 ENSMUST00000108040.8 ENSMUST00000108041.8 ENSMUST00000108042.3 |