Pregenerated sensors for IL11 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000004371Ensembl transcript IDs: ENSMUST00000094892.12, ENSMUST00000163481.3, ENSMUST00000234277.2
Found 61 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GCTCCTGGGTCGCAGAGACGTTCAATATCTAAAGCAGTCTTCGCCTaGAACTTGCCTTTTTATGGTTGGCGAGCTAGAACTTCATCATGC | + |
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Preference number: 1 (lower is better) Translates to: APGSQRRSISKAVFA*NLPFYGWRARTSSC Trigger: GCATGATGAAGTTCTAGCTCGCCAACCATAAAAAGGCAAGTTCCAGGCGAAGACTGCTTTAGATATTGAACGTCTCTGCGACCCAGGAGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000094892.12 |
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| 3UTR GCA 90 bp | CTGGAAAATGCAAACACAAACAGTAACAGTCACCCACTGTGCCATTaGTTGTTTTCAGCCCTGAGGCAGCTATCGTCAACATCATGGTGT | + |
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Preference number: 1 (lower is better) Translates to: LENANTNSNSHPLCH*LFSALRQLSSTSWC Trigger: ACACCATGATGTTGACGATAGCTGCCTCAGGGCTGAAAACAAGCAATGGCACAGTGGGTGACTGTTACTGTTTGTGTTTGCATTTTCCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094892.12 |
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| 3UTR TCA 90 bp | TTCAGCCCTGAGGCAGCTATCGTCAACATCATGGTGTTTCCATTTTaGAAAACCAAACAGTCCATACTCATGTATAGGGAGAGTAGTTCT | + |
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Preference number: 1 (lower is better) Translates to: FSPEAAIVNIMVFPF*KTKQSILMYRESSS Trigger: AGAACTACTCTCCCTATACATGAGTATGGACTGTTTGGTTTTTCAAAATGGAAACACCATGATGTTGACGATAGCTGCCTCAGGGCTGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094892.12 |
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| 3UTR-3UTR CCA 90 bp | ACCCAGGATCTCAGTTCCCTGCTCTTCAGGGTCTCAGATGCACCCACCCACCCCCTCACCCAGGTCTACTaGAAAGACTGTCTAGCTGGG | + |
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Preference number: 2 (lower is better) Translates to: TQDLSSLLFRVSDAPTHPLTQVY*KDCLAG Trigger: CCCAGCTAGACAGTCTTTCCAGTAGACCTGGGTGAG...GGGGTGGGTGGGTGCATCTGAGACCCTGAAGAGCAGGGAACTGAGATCCTGGGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000094892.12 ENSMUST00000163481.3 ENSMUST00000234277.2 |
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| 3UTR-3UTR CCA 90 bp | AGACCCCAGAACCCAGGATCTCAGTTCCCTGCTCTTCAGGGTCTCAGATGCACCCTCACCCAGGTCTACTaGAAAGACTGTCTAGCTGGG | + |
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Preference number: 2 (lower is better) Translates to: RPQNPGSQFPALQGLRCTLTQVY*KDCLAG Trigger: CCCAGCTAGACAGTCTTTCCAGTAGACCTGGGTGAG...GGTGCATCTGAGACCCTGAAGAGCAGGGAACTGAGATCCTGGGTTCTGGGGTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000094892.12 ENSMUST00000163481.3 ENSMUST00000234277.2 |
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| 3UTR-3UTR CCA 90 bp | CAGTCACCCACTGTGCCATTGCTTGTTTTCAGCCCTGAGGCAGCTATCGTCAACACTCTTAGACCAGGCTaGCCTCGAACTCAGAAATCT | + |
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Preference number: 2 (lower is better) Translates to: QSPTVPLLVFSPEAAIVNTLRPG*PRTQKS Trigger: AGATTTCTGAGTTCGAGGCCAGCCTGGTCTAAGAGT...GTTGACGATAGCTGCCTCAGGGCTGAAAACAAGCAATGGCACAGTGGGTGACTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094892.12 |
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| 3UTR-3UTR GCA 90 bp | TCCATACTCATGTATAGGGAGAGTAGTTCTACCATCTGCTGCTCCTGGGTCGCAAGGATCTCAGTTCCCTaGTCTTCAGGGTCTCAGATG | + |
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Preference number: 2 (lower is better) Translates to: SILMYRESSSTICCSWVARISVP*SSGSQM Trigger: CATCTGAGACCCTGAAGAGCAGGGAACTGAGATCCT...TGCGACCCAGGAGCAGCAGATGGTAGAACTACTCTCCCTATACATGAGTATGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094892.12 |
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| 3UTR CAA 90 bp | GAAAATGCAAACACAAACAGTAACAGTCACCCACTGTGCCATTGCTaGTTTTCAGCCCTGAGGCAGCTATCGTCAACATCATGGTGTTTC | + |
|
Preference number: 2 (lower is better) Translates to: ENANTNSNSHPLCHC*FSALRQLSSTSWCF Trigger: GAAACACCATGATGTTGACGATAGCTGCCTCAGGGCTGAAAACAAGCAATGGCACAGTGGGTGACTGTTACTGTTTGTGTTTGCATTTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094892.12 |
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| 3UTR-3UTR GCA 90 bp | ATAAATAATGTAGGAAGTGAGGAAGACACTGTGAACAGATTTCATAGAGACCCCAGGATCTCAGTTCCCTaGTCTTCAGGGTCTCAGATG | + |
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Preference number: 2 (lower is better) Translates to: INNVGSEEDTVNRFHRDPRISVP*SSGSQM Trigger: CATCTGAGACCCTGAAGAGCAGGGAACTGAGATCCT...GGGGTCTCTATGAAATCTGTTCACAGTGTCTTCCTCACTTCCTACATTATTTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000094892.12 ENSMUST00000163481.3 ENSMUST00000234277.2 |
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| 3UTR-3UTR CAA 90 bp | ACCCAGGATCTCAGTTCCCTGCTCTTCAGGGTCTCAGATGCACCCACCCACCCCCTGGGTGTGGGGCGGTaGTTTGGGGTGTGGCATGCC | + |
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Preference number: 3 (lower is better) Translates to: TQDLSSLLFRVSDAPTHPLGVGR*FGVWHA Trigger: GGCATGCCACACCCCAAACAACCGCCCCACACCCAG...GGGGTGGGTGGGTGCATCTGAGACCCTGAAGAGCAGGGAACTGAGATCCTGGGT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000094892.12 ENSMUST00000163481.3 ENSMUST00000234277.2 |
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| 3UTR-3UTR CAA 90 bp | CAGTCACCCACTGTGCCATTGCTTGTTTTCAGCCCTGAGGCAGCTATCGTCAACCTGGGTGTGGGGCGGTaGTTTGGGGTGTGGCATGCC | + |
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Preference number: 3 (lower is better) Translates to: QSPTVPLLVFSPEAAIVNLGVGR*FGVWHA Trigger: GGCATGCCACACCCCAAACAACCGCCCCACACCCAG...GTTGACGATAGCTGCCTCAGGGCTGAAAACAAGCAATGGCACAGTGGGTGACTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000094892.12 |
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| 3UTR GCA 72 bp | TTCATAGAGACCCCAGAACCCAGGATCTCAGTTCCCTaGTCTTCAGGGTCTCAGATGCACCCACCCACCCCC | + |
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Preference number: 3 (lower is better) Translates to: FIETPEPRISVP*SSGSQMHPPTP Trigger: GGGGGTGGGTGGGTGCATCTGAGACCCTGAAGAGCAGGGAACTGAGATCCTGGGTTCTGGGGTCTCTATGAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000094892.12 ENSMUST00000163481.3 ENSMUST00000234277.2 |
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| 3UTR CCA 72 bp | AATAAGCCACAGGTGATCCCCCTCACCCAGGTCTACTaGAAAGACTGTCTAGCTGGGTGTGGGGCGGTTGTT | + |
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Preference number: 3 (lower is better) Translates to: NKPQVIPLTQVY*KDCLAGCGAVV Trigger: AACAACCGCCCCACACCCAGCTAGACAGTCTTTCCAGTAGACCTGGGTGAGGGGGATCACCTGTGGCTTATT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000094892.12 ENSMUST00000163481.3 ENSMUST00000234277.2 |
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| 3UTR CCA 72 bp | TCGCAGAGACGTTCAATATCTAAAGCAGTCTTCGCCTaGAACTTGCCTTTTTATGGTTGGCGAGCTAGAACT | + |
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Preference number: 3 (lower is better) Translates to: SQRRSISKAVFA*NLPFYGWRART Trigger: AGTTCTAGCTCGCCAACCATAAAAAGGCAAGTTCCAGGCGAAGACTGCTTTAGATATTGAACGTCTCTGCGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000094892.12 |
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| CDS-3UTR TCA 90 bp | ACCCAGGATCTCAGTTCCCTGCTCTTCAGGGTCTCAGATGCACCCACCCACCCCGATGCTTCCCCAGGCTaGGGCAGGAGGGCCCAGGGG | + |
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Preference number: 4 (lower is better) Translates to: TQDLSSLLFRVSDAPTHPDASPG*GRRAQG Trigger: CCCCTGGGCCCTCCTGCCTCAGCCTGGGGAAGCATC...GGGGTGGGTGGGTGCATCTGAGACCCTGAAGAGCAGGGAACTGAGATCCTGGGT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000094892.12 ENSMUST00000163481.3 ENSMUST00000234277.2 |
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| CDS-3UTR TCA 90 bp | CCCCAGAACCCAGGATCTCAGTTCCCTGCTCTTCAGGGTCTCAGATGCACCCACGATGCTTCCCCAGGCTaGGGCAGGAGGGCCCAGGGG | + |
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Preference number: 4 (lower is better) Translates to: PQNPGSQFPALQGLRCTHDASPG*GRRAQG Trigger: CCCCTGGGCCCTCCTGCCTCAGCCTGGGGAAGCATC...GTGGGTGCATCTGAGACCCTGAAGAGCAGGGAACTGAGATCCTGGGTTCTGGGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000094892.12 ENSMUST00000163481.3 ENSMUST00000234277.2 |
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| CDS-3UTR GCA 90 bp | ACCCAGGATCTCAGTTCCCTGCTCTTCAGGGTCTCAGATGCACCCACCCACCCCAGGTTGGTCTGGGGCTaGCTGGGGCAAGGCCAGGCG | + |
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Preference number: 4 (lower is better) Translates to: TQDLSSLLFRVSDAPTHPRLVWG*LGQGQA Trigger: CGCCTGGCCTTGCCCCAGGCAGCCCCAGACCAACCT...GGGGTGGGTGGGTGCATCTGAGACCCTGAAGAGCAGGGAACTGAGATCCTGGGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000094892.12 ENSMUST00000163481.3 ENSMUST00000234277.2 |
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| CDS-3UTR CCA 90 bp | CCAGAACCCAGGATCTCAGTTCCCTGCTCTTCAGGGTCTCAGATGCACCCACCCTGGTCTGGGGCTGCCTaGGGCAAGGCCAGGCGAGAC | + |
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Preference number: 4 (lower is better) Translates to: PEPRISVPCSSGSQMHPPWSGAA*GKARRD Trigger: GTCTCGCCTGGCCTTGCCCCAGGCAGCCCCAGACCA...GGGTGGGTGCATCTGAGACCCTGAAGAGCAGGGAACTGAGATCCTGGGTTCTGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000094892.12 ENSMUST00000163481.3 ENSMUST00000234277.2 |
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| CDS-3UTR CCA 90 bp | CCAGGTCTACTGGAAAGACTGTCTAGCTGGGTGTGGGGCGGTTGTTTGGGGTGTTGGTCTGGGGCTGCCTaGGGCAAGGCCAGGCGAGAC | + |
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Preference number: 4 (lower is better) Translates to: PGLLERLSSWVWGGCLGCWSGAA*GKARRD Trigger: GTCTCGCCTGGCCTTGCCCCAGGCAGCCCCAGACCA...ACACCCCAAACAACCGCCCCACACCCAGCTAGACAGTCTTTCCAGTAGACCTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000094892.12 ENSMUST00000163481.3 ENSMUST00000234277.2 |
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| CDS-3UTR TCA 90 bp | CCAGAACCCAGGATCTCAGTTCCCTGCTCTTCAGGGTCTCAGATGCACCCACCCCCTCCTAGGATGGCATaGGCTGCCCGGATGCTTCCC | + |
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Preference number: 4 (lower is better) Translates to: PEPRISVPCSSGSQMHPPPPRMA*AARMLP Trigger: GGGAAGCATCCGGGCAGCTCATGCCATCCTAGGAGG...GGGTGGGTGCATCTGAGACCCTGAAGAGCAGGGAACTGAGATCCTGGGTTCTGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000094892.12 ENSMUST00000163481.3 ENSMUST00000234277.2 |
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| CDS-3UTR CCA 90 bp | CACCCAGGTCTACTGGAAAGACTGTCTAGCTGGGTGTGGGGCGGTTGTTTGGGGCGCTCATGGCCAAGGTaGGCAGGGAGTCCAGACTGT | + |
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Preference number: 4 (lower is better) Translates to: HPGLLERLSSWVWGGCLGRSWPR*AGSPDC Trigger: ACAGTCTGGACTCCCTGCCCACCTTGGCCATGAGCG...CCCCAAACAACCGCCCCACACCCAGCTAGACAGTCTTTCCAGTAGACCTGGGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000094892.12 ENSMUST00000163481.3 ENSMUST00000234277.2 |
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| CDS-3UTR CCA 90 bp | CCAGAACCCAGGATCTCAGTTCCCTGCTCTTCAGGGTCTCAGATGCACCCACCCATGTCCCAGCGCTCATaGCCAAGGTGGGCAGGGAGT | + |
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Preference number: 4 (lower is better) Translates to: PEPRISVPCSSGSQMHPPMSQRS*PRWAGS Trigger: ACTCCCTGCCCACCTTGGCCATGAGCGCTGGGACAT...GGGTGGGTGCATCTGAGACCCTGAAGAGCAGGGAACTGAGATCCTGGGTTCTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000094892.12 ENSMUST00000163481.3 ENSMUST00000234277.2 |
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| CDS-3UTR CCA 90 bp | CCCCAGAACCCAGGATCTCAGTTCCCTGCTCTTCAGGGTCTCAGATGCACCCACATGTCCCAGCGCTCATaGCCAAGGTGGGCAGGGAGT | + |
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Preference number: 4 (lower is better) Translates to: PQNPGSQFPALQGLRCTHMSQRS*PRWAGS Trigger: ACTCCCTGCCCACCTTGGCCATGAGCGCTGGGACAT...GTGGGTGCATCTGAGACCCTGAAGAGCAGGGAACTGAGATCCTGGGTTCTGGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000094892.12 ENSMUST00000163481.3 ENSMUST00000234277.2 |
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| CDS-3UTR TCA 90 bp | GCTGTCCTGGAACTCACGAACTCACTCTTAGACCAGGCTGGCCTCGAACTCAGACCTCCTAGGATGGCATaGGCTGCCCGGATGCTTCCC | + |
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Preference number: 4 (lower is better) Translates to: AVLELTNSLLDQAGLELRPPRMA*AARMLP Trigger: GGGAAGCATCCGGGCAGCTCATGCCATCCTAGGAGG...TCTGAGTTCGAGGCCAGCCTGGTCTAAGAGTGAGTTCGTGAGTTCCAGGACAGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094892.12 |
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| CDS-3UTR CCA 90 bp | CCAGGTCTACTGGAAAGACTGTCTAGCTGGGTGTGGGGCGGTTGTTTGGGGTGTCGCTCATGGCCAAGGTaGGCAGGGAGTCCAGACTGT | + |
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Preference number: 4 (lower is better) Translates to: PGLLERLSSWVWGGCLGCRSWPR*AGSPDC Trigger: ACAGTCTGGACTCCCTGCCCACCTTGGCCATGAGCG...ACACCCCAAACAACCGCCCCACACCCAGCTAGACAGTCTTTCCAGTAGACCTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000094892.12 ENSMUST00000163481.3 ENSMUST00000234277.2 |
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| CDS-3UTR CCA 90 bp | AGACCCCAGAACCCAGGATCTCAGTTCCCTGCTCTTCAGGGTCTCAGATGCACCATGTCCCAGCGCTCATaGCCAAGGTGGGCAGGGAGT | + |
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Preference number: 4 (lower is better) Translates to: RPQNPGSQFPALQGLRCTMSQRS*PRWAGS Trigger: ACTCCCTGCCCACCTTGGCCATGAGCGCTGGGACAT...GGTGCATCTGAGACCCTGAAGAGCAGGGAACTGAGATCCTGGGTTCTGGGGTCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000094892.12 ENSMUST00000163481.3 ENSMUST00000234277.2 |
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| CDS-3UTR TCA 90 bp | GACCCCAGAACCCAGGATCTCAGTTCCCTGCTCTTCAGGGTCTCAGATGCACCCAGGGAGTCCAGACTGTaGTCTCCGTCAGCTGGGAAT | + |
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Preference number: 4 (lower is better) Translates to: DPRTQDLSSLLFRVSDAPRESRL*SPSAGN Trigger: ATTCCCAGCTGACGGAGATCACAGTCTGGACTCCCT...GGGTGCATCTGAGACCCTGAAGAGCAGGGAACTGAGATCCTGGGTTCTGGGGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000094892.12 ENSMUST00000163481.3 ENSMUST00000234277.2 |
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| CDS-3UTR TCA 90 bp | GGTCTACTGGAAAGACTGTCTAGCTGGGTGTGGGGCGGTTGTTTGGGGTGTGGCAGGGAGTCCAGACTGTaGTCTCCGTCAGCTGGGAAT | + |
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Preference number: 4 (lower is better) Translates to: GLLERLSSWVWGGCLGCGRESRL*SPSAGN Trigger: ATTCCCAGCTGACGGAGATCACAGTCTGGACTCCCT...GCCACACCCCAAACAACCGCCCCACACCCAGCTAGACAGTCTTTCCAGTAGACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000094892.12 ENSMUST00000163481.3 ENSMUST00000234277.2 |
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| CDS-3UTR CCA 90 bp | ACAGATTTCATAGAGACCCCAGAACCCAGGATCTCAGTTCCCTGCTCTTCAGGGAGGGGAGCCAGCTGGTaGCCCAGGGGCAACGACTCT | + |
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Preference number: 4 (lower is better) Translates to: TDFIETPEPRISVPCSSGRGASW*PRGNDS Trigger: AGAGTCGTTGCCCCTGGGCCACCAGCTGGCTCCCCT...CCCTGAAGAGCAGGGAACTGAGATCCTGGGTTCTGGGGTCTCTATGAAATCTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000094892.12 |
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| CDS-3UTR GCA 90 bp | GAAGACACTGTGAACAGATTTCATAGAGACCCCAGAACCCAGGATCTCAGTTCCAGGTTGGTCTGGGGCTaGCTGGGGCAAGGCCAGGCG | + |
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Preference number: 4 (lower is better) Translates to: EDTVNRFHRDPRTQDLSSRLVWG*LGQGQA Trigger: CGCCTGGCCTTGCCCCAGGCAGCCCCAGACCAACCT...GGAACTGAGATCCTGGGTTCTGGGGTCTCTATGAAATCTGTTCACAGTGTCTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000094892.12 ENSMUST00000163481.3 ENSMUST00000234277.2 |
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| CDS-3UTR GCA 90 bp | CACCCAGGTCTACTGGAAAGACTGTCTAGCTGGGTGTGGGGCGGTTGTTTGGGGAGCACACCAGGAAGCTaGAAAGATCCCAATGTCCCA | + |
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Preference number: 4 (lower is better) Translates to: HPGLLERLSSWVWGGCLGSTPGS*KDPNVP Trigger: TGGGACATTGGGATCTTTGCAGCTTCCTGGTGTGCT...CCCCAAACAACCGCCCCACACCCAGCTAGACAGTCTTTCCAGTAGACCTGGGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000094892.12 ENSMUST00000163481.3 ENSMUST00000234277.2 |
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| CDS-3UTR TCA 90 bp | GAAGACACTGTGAACAGATTTCATAGAGACCCCAGAACCCAGGATCTCAGTTCCCCTCCTAGGATGGCATaGGCTGCCCGGATGCTTCCC | + |
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Preference number: 4 (lower is better) Translates to: EDTVNRFHRDPRTQDLSSPPRMA*AARMLP Trigger: GGGAAGCATCCGGGCAGCTCATGCCATCCTAGGAGG...GGAACTGAGATCCTGGGTTCTGGGGTCTCTATGAAATCTGTTCACAGTGTCTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000094892.12 ENSMUST00000163481.3 ENSMUST00000234277.2 |
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| CDS-3UTR GCA 90 bp | AGACCCCAGAACCCAGGATCTCAGTTCCCTGCTCTTCAGGGTCTCAGATGCACCAGCACACCAGGAAGCTaGAAAGATCCCAATGTCCCA | + |
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Preference number: 4 (lower is better) Translates to: RPQNPGSQFPALQGLRCTSTPGS*KDPNVP Trigger: TGGGACATTGGGATCTTTGCAGCTTCCTGGTGTGCT...GGTGCATCTGAGACCCTGAAGAGCAGGGAACTGAGATCCTGGGTTCTGGGGTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000094892.12 ENSMUST00000163481.3 ENSMUST00000234277.2 |
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| CDS-3UTR TCA 90 bp | ACAGATTTCATAGAGACCCCAGAACCCAGGATCTCAGTTCCCTGCTCTTCAGGGAGGGAGTCCAGACTGTaGTCTCCGTCAGCTGGGAAT | + |
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Preference number: 4 (lower is better) Translates to: TDFIETPEPRISVPCSSGRESRL*SPSAGN Trigger: ATTCCCAGCTGACGGAGATCACAGTCTGGACTCCCT...CCCTGAAGAGCAGGGAACTGAGATCCTGGGTTCTGGGGTCTCTATGAAATCTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000094892.12 ENSMUST00000163481.3 ENSMUST00000234277.2 |
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| CDS-3UTR CCA 90 bp | GGAAGTGAGGAAGACACTGTGAACAGATTTCATAGAGACCCCAGAACCCAGGATCGCTCATGGCCAAGGTaGGCAGGGAGTCCAGACTGT | + |
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Preference number: 4 (lower is better) Translates to: GSEEDTVNRFHRDPRTQDRSWPR*AGSPDC Trigger: ACAGTCTGGACTCCCTGCCCACCTTGGCCATGAGCG...ATCCTGGGTTCTGGGGTCTCTATGAAATCTGTTCACAGTGTCTTCCTCACTTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000094892.12 ENSMUST00000163481.3 ENSMUST00000234277.2 |
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| CDS-3UTR CCA 90 bp | ATAAATAATGTAGGAAGTGAGGAAGACACTGTGAACAGATTTCATAGAGACCCCTGGTCTGGGGCTGCCTaGGGCAAGGCCAGGCGAGAC | + |
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Preference number: 4 (lower is better) Translates to: INNVGSEEDTVNRFHRDPWSGAA*GKARRD Trigger: GTCTCGCCTGGCCTTGCCCCAGGCAGCCCCAGACCA...GGGGTCTCTATGAAATCTGTTCACAGTGTCTTCCTCACTTCCTACATTATTTAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000094892.12 ENSMUST00000163481.3 ENSMUST00000234277.2 |
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| CDS-3UTR CCA 90 bp | TCCATACTCATGTATAGGGAGAGTAGTTCTACCATCTGCTGCTCCTGGGTCGCAGTGATCTCCGTCAGCTaGGAATTTGTCTCTCATCTG | + |
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Preference number: 4 (lower is better) Translates to: SILMYRESSSTICCSWVAVISVS*EFVSHL Trigger: CAGATGAGAGACAAATTCCCAGCTGACGGAGATCAC...TGCGACCCAGGAGCAGCAGATGGTAGAACTACTCTCCCTATACATGAGTATGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094892.12 |
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| CDS-3UTR GCA 90 bp | TCAGCCCTGAGGCAGCTATCGTCAACATCATGGTGTTTCCATTTTGAAAAACCAAGCACACCAGGAAGCTaGAAAGATCCCAATGTCCCA | + |
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Preference number: 4 (lower is better) Translates to: SALRQLSSTSWCFHFEKPSTPGS*KDPNVP Trigger: TGGGACATTGGGATCTTTGCAGCTTCCTGGTGTGCT...TGGTTTTTCAAAATGGAAACACCATGATGTTGACGATAGCTGCCTCAGGGCTGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000094892.12 |
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| CDS CCA 90 bp | GGCCCCGCACGGCCCAGTCCAAGGTCAGGTGCAGCCCTCCTAGGATaGCATGAGCTGCCCGGATGCTTCCCCAGGCTGAGGCAGGAGGGC | + |
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Preference number: 5 (lower is better) Translates to: GPARPSPRSGAALLG*HELPGCFPRLRQEG Trigger: GCCCTCCTGCCTCAGCCTGGGGAAGCATCCGGGCAGCTCATGCCATCCTAGGAGGGCTGCACCTGACCTTGGACTGGGCCGTGCGGGGCC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000094892.12 ENSMUST00000163481.3 ENSMUST00000234277.2 |
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| CDS CCA 90 bp | GAGGCAGGAGGGCCCAGGGGGATCACAGGTTGGTCTGGGGCTGCCTaGGGCAAGGCCAGGCGAGACATCAAGAGCTGTAAACGGCGGAGT | + |
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Preference number: 5 (lower is better) Translates to: EAGGPRGITGWSGAA*GKARRDIKSCKRRS Trigger: ACTCCGCCGTTTACAGCTCTTGATGTCTCGCCTGGCCTTGCCCCAGGCAGCCCCAGACCAACCTGTGATCCCCCTGGGCCCTCCTGCCTC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000094892.12 ENSMUST00000163481.3 ENSMUST00000234277.2 |
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| CDS CCA 90 bp | GACTCGAGGGGAGCCAGCTGGTGGCCCAGGGGCAACGACTCTATCTaGCCAGAGGCTCAGCACCACCAGGACCAGGCGACAAACACAGTT | + |
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Preference number: 5 (lower is better) Translates to: DSRGASWWPRGNDSI*PEAQHHQDQATNTV Trigger: AACTGTGTTTGTCGCCTGGTCCTGGTGGTGCTGAGCCTCTGGCCAGATAGAGTCGTTGCCCCTGGGCCACCAGCTGGCTCCCCTCGAGTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094892.12 |
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| CDS-3UTR CAA 90 bp | GACCCCAGAACCCAGGATCTCAGTTCCCTGCTCTTCAGGGTCTCAGATGCACCCCCGTTCCAGTCGGGCTaGCAGGGCACCCAGCTCTGG | + |
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Preference number: 5 (lower is better) Translates to: DPRTQDLSSLLFRVSDAPPFQSG*QGTQLW Trigger: CCAGAGCTGGGTGCCCTGCAAGCCCGACTGGAACGG...GGGTGCATCTGAGACCCTGAAGAGCAGGGAACTGAGATCCTGGGTTCTGGGGTC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000094892.12 ENSMUST00000163481.3 ENSMUST00000234277.2 |
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| CDS-3UTR CAA 90 bp | GACCCCAGAACCCAGGATCTCAGTTCCCTGCTCTTCAGGGTCTCAGATGCACCCCAGGGGGATCACAGGTaGGTCTGGGGCTGCCTGGGG | + |
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Preference number: 5 (lower is better) Translates to: DPRTQDLSSLLFRVSDAPQGDHR*VWGCLG Trigger: CCCCAGGCAGCCCCAGACCAACCTGTGATCCCCCTG...GGGTGCATCTGAGACCCTGAAGAGCAGGGAACTGAGATCCTGGGTTCTGGGGTC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000094892.12 ENSMUST00000163481.3 ENSMUST00000234277.2 |
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| CDS-3UTR CAA 90 bp | CCAGAACCCAGGATCTCAGTTCCCTGCTCTTCAGGGTCTCAGATGCACCCACCCCAGGGGGATCACAGGTaGGTCTGGGGCTGCCTGGGG | + |
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Preference number: 5 (lower is better) Translates to: PEPRISVPCSSGSQMHPPQGDHR*VWGCLG Trigger: CCCCAGGCAGCCCCAGACCAACCTGTGATCCCCCTG...GGGTGGGTGCATCTGAGACCCTGAAGAGCAGGGAACTGAGATCCTGGGTTCTGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000094892.12 ENSMUST00000163481.3 ENSMUST00000234277.2 |
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| CDS CCA 90 bp | TCAGCACACCAGGAAGCTGCAAAGATCCCAATGTCCCAGCGCTCATaGCCAAGGTGGGCAGGGAGTCCAGACTGTGATCTCCGTCAGCTG | + |
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Preference number: 5 (lower is better) Translates to: SAHQEAAKIPMSQRS*PRWAGSPDCDLRQL Trigger: CAGCTGACGGAGATCACAGTCTGGACTCCCTGCCCACCTTGGCCATGAGCGCTGGGACATTGGGATCTTTGCAGCTTCCTGGTGTGCTGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000094892.12 ENSMUST00000163481.3 ENSMUST00000234277.2 |
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| CDS-3UTR CAA 90 bp | ACAGATTTCATAGAGACCCCAGAACCCAGGATCTCAGTTCCCTGCTCTTCAGGGCCGTTCCAGTCGGGCTaGCAGGGCACCCAGCTCTGG | + |
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Preference number: 5 (lower is better) Translates to: TDFIETPEPRISVPCSSGPFQSG*QGTQLW Trigger: CCAGAGCTGGGTGCCCTGCAAGCCCGACTGGAACGG...CCCTGAAGAGCAGGGAACTGAGATCCTGGGTTCTGGGGTCTCTATGAAATCTGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000094892.12 ENSMUST00000163481.3 ENSMUST00000234277.2 |
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| CDS CCA 90 bp | CAGGAAGCTGCAAAGATCCCAATGTCCCAGCGCTCATGGCCAAGGTaGGCAGGGAGTCCAGACTGTGATCTCCGTCAGCTGGGAATTTGT | + |
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Preference number: 5 (lower is better) Translates to: QEAAKIPMSQRSWPR*AGSPDCDLRQLGIC Trigger: ACAAATTCCCAGCTGACGGAGATCACAGTCTGGACTCCCTGCCCACCTTGGCCATGAGCGCTGGGACATTGGGATCTTTGCAGCTTCCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000094892.12 ENSMUST00000163481.3 ENSMUST00000234277.2 |
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| CDS-3UTR CAA 90 bp | GGTCTACTGGAAAGACTGTCTAGCTGGGTGTGGGGCGGTTGTTTGGGGTGTGGCAGTCTACTCGAAGCCTaGTCAGCACACCAGGAAGCT | + |
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Preference number: 5 (lower is better) Translates to: GLLERLSSWVWGGCLGCGSLLEA*SAHQEA Trigger: AGCTTCCTGGTGTGCTGACAAGGCTTCGAGTAGACT...GCCACACCCCAAACAACCGCCCCACACCCAGCTAGACAGTCTTTCCAGTAGACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000094892.12 ENSMUST00000163481.3 ENSMUST00000234277.2 |
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| CDS-3UTR CAA 90 bp | GAAGACACTGTGAACAGATTTCATAGAGACCCCAGAACCCAGGATCTCAGTTCCCAGGGGGATCACAGGTaGGTCTGGGGCTGCCTGGGG | + |
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Preference number: 5 (lower is better) Translates to: EDTVNRFHRDPRTQDLSSQGDHR*VWGCLG Trigger: CCCCAGGCAGCCCCAGACCAACCTGTGATCCCCCTG...GGAACTGAGATCCTGGGTTCTGGGGTCTCTATGAAATCTGTTCACAGTGTCTTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000094892.12 ENSMUST00000163481.3 ENSMUST00000234277.2 |
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| CDS-3UTR CAA 90 bp | CCAGGTCTACTGGAAAGACTGTCTAGCTGGGTGTGGGGCGGTTGTTTGGGGTGTAGTCTACTCGAAGCCTaGTCAGCACACCAGGAAGCT | + |
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Preference number: 5 (lower is better) Translates to: PGLLERLSSWVWGGCLGCSLLEA*SAHQEA Trigger: AGCTTCCTGGTGTGCTGACAAGGCTTCGAGTAGACT...ACACCCCAAACAACCGCCCCACACCCAGCTAGACAGTCTTTCCAGTAGACCTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000094892.12 ENSMUST00000163481.3 ENSMUST00000234277.2 |
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| CDS-3UTR CAA 90 bp | ACAGATTTCATAGAGACCCCAGAACCCAGGATCTCAGTTCCCTGCTCTTCAGGGTGCACGGCGCAGCCATaGTACATGCCGGAGGTAGGA | + |
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Preference number: 5 (lower is better) Translates to: TDFIETPEPRISVPCSSGCTAQP*YMPEVG Trigger: TCCTACCTCCGGCATGTACAATGGCTGCGCCGTGCA...CCCTGAAGAGCAGGGAACTGAGATCCTGGGTTCTGGGGTCTCTATGAAATCTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000094892.12 ENSMUST00000163481.3 ENSMUST00000234277.2 |
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| CDS-3UTR CAA 90 bp | TCAGCCCTGAGGCAGCTATCGTCAACATCATGGTGTTTCCATTTTGAAAAACCACCGTTCCAGTCGGGCTaGCAGGGCACCCAGCTCTGG | + |
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Preference number: 5 (lower is better) Translates to: SALRQLSSTSWCFHFEKPPFQSG*QGTQLW Trigger: CCAGAGCTGGGTGCCCTGCAAGCCCGACTGGAACGG...TGGTTTTTCAAAATGGAAACACCATGATGTTGACGATAGCTGCCTCAGGGCTGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000094892.12 |
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| CDS-3UTR CAA 90 bp | CAGTCACCCACTGTGCCATTGCTTGTTTTCAGCCCTGAGGCAGCTATCGTCAACCCGTCAGCTGGGAATTaGTCTCTCATCTGTGCAGCT | + |
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Preference number: 5 (lower is better) Translates to: QSPTVPLLVFSPEAAIVNPSAGN*SLICAA Trigger: AGCTGCACAGATGAGAGACAAATTCCCAGCTGACGG...GTTGACGATAGCTGCCTCAGGGCTGAAAACAAGCAATGGCACAGTGGGTGACTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094892.12 |
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| CDS-3UTR CAA 90 bp | ATAAATAATGTAGGAAGTGAGGAAGACACTGTGAACAGATTTCATAGAGACCCCAGTCTACTCGAAGCCTaGTCAGCACACCAGGAAGCT | + |
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Preference number: 5 (lower is better) Translates to: INNVGSEEDTVNRFHRDPSLLEA*SAHQEA Trigger: AGCTTCCTGGTGTGCTGACAAGGCTTCGAGTAGACT...GGGGTCTCTATGAAATCTGTTCACAGTGTCTTCCTCACTTCCTACATTATTTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000094892.12 ENSMUST00000163481.3 ENSMUST00000234277.2 |
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| CDS CCA 72 bp | CGGCCCAGTCCAAGGTCAGGTGCAGCCCTCCTAGGATaGCATGAGCTGCCCGGATGCTTCCCCAGGCTGAGG | + |
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Preference number: 6 (lower is better) Translates to: RPSPRSGAALLG*HELPGCFPRLR Trigger: CCTCAGCCTGGGGAAGCATCCGGGCAGCTCATGCCATCCTAGGAGGGCTGCACCTGACCTTGGACTGGGCCG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000094892.12 ENSMUST00000163481.3 ENSMUST00000234277.2 |
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| CDS GCA 72 bp | AGCTGTAAACGGCGGAGTAGCCGTTCCAGTCGGGCTTaGAGGGCACCCAGCTCTGGCTCCAGAGTCTTTAGG | + |
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Preference number: 6 (lower is better) Translates to: SCKRRSSRSSRA*RAPSSGSRVFR Trigger: CCTAAAGACTCTGGAGCCAGAGCTGGGTGCCCTGCAAGCCCGACTGGAACGGCTACTCCGCCGTTTACAGCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000094892.12 ENSMUST00000163481.3 ENSMUST00000234277.2 |
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| CDS CCA 72 bp | GCAAAGATCCCAATGTCCCAGCGCTCATGGCCAAGGTaGGCAGGGAGTCCAGACTGTGATCTCCGTCAGCTG | + |
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Preference number: 6 (lower is better) Translates to: AKIPMSQRSWPR*AGSPDCDLRQL Trigger: CAGCTGACGGAGATCACAGTCTGGACTCCCTGCCCACCTTGGCCATGAGCGCTGGGACATTGGGATCTTTGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000094892.12 ENSMUST00000163481.3 ENSMUST00000234277.2 |
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| CDS CAA 90 bp | GCCATTGTACATGCCGGAGGTAGGACATCAAGTCTACTCGAAGCCTaGTCAGCACACCAGGAAGCTGCAAAGATCCCAATGTCCCAGCGC | + |
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Preference number: 6 (lower is better) Translates to: AIVHAGGRTSSLLEA*SAHQEAAKIPMSQR Trigger: GCGCTGGGACATTGGGATCTTTGCAGCTTCCTGGTGTGCTGACAAGGCTTCGAGTAGACTTGATGTCCTACCTCCGGCATGTACAATGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000094892.12 ENSMUST00000163481.3 ENSMUST00000234277.2 |
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| CDS GCA 72 bp | TCAGCTGGGAATTTGTCTCTCATCTGTGCAGCTAGTTaGCGTGTGTCTGCCAGGAGGGATCGGGTTAGGAGA | + |
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Preference number: 6 (lower is better) Translates to: SAGNLSLICAAS*RVSARRDRVRR Trigger: TCTCCTAACCCGATCCCTCCTGGCAGACACACGGCAACTAGCTGCACAGATGAGAGACAAATTCCCAGCTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094892.12 |
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| CDS GCA 72 bp | AAGTCTACTCGAAGCCTTGTCAGCACACCAGGAAGCTaGAAAGATCCCAATGTCCCAGCGCTCATGGCCAAG | + |
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Preference number: 6 (lower is better) Translates to: KSTRSLVSTPGS*KDPNVPALMAK Trigger: CTTGGCCATGAGCGCTGGGACATTGGGATCTTTGCAGCTTCCTGGTGTGCTGACAAGGCTTCGAGTAGACTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000094892.12 ENSMUST00000163481.3 ENSMUST00000234277.2 |
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| CDS CAA 72 bp | CATGCCGGAGGTAGGACATCAAGTCTACTCGAAGCCTaGTCAGCACACCAGGAAGCTGCAAAGATCCCAATG | + |
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Preference number: 6 (lower is better) Translates to: HAGGRTSSLLEA*SAHQEAAKIPM Trigger: CATTGGGATCTTTGCAGCTTCCTGGTGTGCTGACAAGGCTTCGAGTAGACTTGATGTCCTACCTCCGGCATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000094892.12 ENSMUST00000163481.3 ENSMUST00000234277.2 |
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