Pregenerated sensors for IL10RB (Mus musculus)
Ensembl gene IDs: ENSMUSG00000022969Ensembl transcript IDs: ENSMUST00000023691.12, ENSMUST00000144215.3, ENSMUST00000156133.8
Found 89 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | ATCCTTGGACTCCAGCTCCCGAGGCCCTGGATCAGACGGGGGCTCTaGGGCACAGTTGTCTTCAGGACTCTGCTTGCTGCCTTCAGACTC | + |
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Preference number: 1 (lower is better) Translates to: ILGLQLPRPWIRRGL*GTVVFRTLLAAFRL Trigger: GAGTCTGAAGGCAGCAAGCAGAGTCCTGAAGACAACTGTGCCTCAGAGCCCCCGTCTGATCCAGGGCCTCGGGAGCTGGAGTCCAAGGAT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000156133.8 |
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| 3UTR GCA 90 bp | CCTGGATCAGACGGGGGCTCTGAGGCACAGTTGTCTTCAGGACTCTaGTTGCTGCCTTCAGACTCTTCGCTGATGATGCTTAGTTTGTCG | + |
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Preference number: 1 (lower is better) Translates to: PGSDGGSEAQLSSGL*LLPSDSSLMMLSLS Trigger: CGACAAACTAAGCATCATCAGCGAAGAGTCTGAAGGCAGCAAGCAGAGTCCTGAAGACAACTGTGCCTCAGAGCCCCCGTCTGATCCAGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000156133.8 |
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| 3UTR CCA 90 bp | AAACGTGCTGTGATGGGGGTGGCCCAGAAACTCCTTCAGGTGCTGTaGAAGAGACGTCCCAGAACGGAAGGTATGCTTGGTCTTCTTATA | + |
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Preference number: 1 (lower is better) Translates to: KRAVMGVAQKLLQVL*KRRPRTEGMLGLLI Trigger: TATAAGAAGACCAAGCATACCTTCCGTTCTGGGACGTCTCTTCCACAGCACCTGAAGGAGTTTCTGGGCCACCCCCATCACAGCACGTTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000144215.3 ENSMUST00000156133.8 |
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| 3UTR TCA 90 bp | GAAGAGACGTCCCAGAACGGAAGGTATGCTTGGTCTTCTTATAAATaGGCCACAGCACGACAAAGCAGCCCAGGAGGAAGAGGAAGACCA | + |
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Preference number: 1 (lower is better) Translates to: EETSQNGRYAWSSYK*ATARQSSPGGRGRP Trigger: TGGTCTTCCTCTTCCTCCTGGGCTGCTTTGTCGTGCTGTGGCTCATTTATAAGAAGACCAAGCATACCTTCCGTTCTGGGACGTCTCTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000144215.3 ENSMUST00000156133.8 |
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| 3UTR GCA 90 bp | ACTCTCCTGTTCTGTTCTGGTCGAGAAGAAACCCTTGAACTTGAATaGAGTAAGTTGTCCACGGCTCCAGGTTCCGGAGGACCTCAGAGT | + |
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Preference number: 1 (lower is better) Translates to: TLLFCSGREETLELE*SKLSTAPGSGGPQS Trigger: ACTCTGAGGTCCTCCGGAACCTGGAGCCGTGGACAACTTACTGCATTCAAGTTCAAGGGTTTCTTCTCGACCAGAACAGAACAGGAGAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000144215.3 ENSMUST00000156133.8 |
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| 3UTR CCA 90 bp | GCTGGGCTTATAGGTAGGTGCCCCCATCCCTGGTTTATATGGTGTTaGGGATCGAAGCTAGGACTTCATGTGTGCCAAGTAAGAGCTCTA | + |
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Preference number: 1 (lower is better) Translates to: AGLIGRCPHPWFIWC*GSKLGLHVCQVRAL Trigger: TAGAGCTCTTACTTGGCACACATGAAGTCCTAGCTTCGATCCCCAACACCATATAAACCAGGGATGGGGGCACCTACCTATAAGCCCAGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023691.12 ENSMUST00000156133.8 |
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| 3UTR CCA 90 bp | CAACAGAGACGAAGTGTGGTGGTAATTACTCAACACCAGGCTGCCTaGGAAGTTTGGGCTCAGGAAGAGAATCCCACTGAGAACCAGTTG | + |
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Preference number: 1 (lower is better) Translates to: QQRRSVVVITQHQAA*EVWAQEENPTENQL Trigger: CAACTGGTTCTCAGTGGGATTCTCTTCCTGAGCCCAAACTTCCCAGGCAGCCTGGTGTTGAGTAATTACCACCACACTTCGTCTCTGTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156133.8 |
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| 3UTR CCA 90 bp | CAATCCAGGAAGGGGTTATTTCGTCATTGCCTGTCCGTTCACAGATaGGTTCACTCCACTCTCCTGTTCTGTTCTGGTCGAGAAGAAACC | + |
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Preference number: 1 (lower is better) Translates to: QSRKGLFRHCLSVHR*VHSTLLFCSGREET Trigger: GGTTTCTTCTCGACCAGAACAGAACAGGAGAGTGGAGTGAACCCATCTGTGAACGGACAGGCAATGACGAAATAACCCCTTCCTGGATTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000144215.3 ENSMUST00000156133.8 |
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| 3UTR TCA 90 bp | TTCTCTCTCTCTCTCTTAGACAGGGTCTCTAGTCCAGCTTGGCCTTaGACTCCCTGTATAGTTCAAGATGACTGTGATCCTCCTGCCTCT | + |
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Preference number: 1 (lower is better) Translates to: FSLSLLDRVSSPAWP*TPCIVQDDCDPPAS Trigger: AGAGGCAGGAGGATCACAGTCATCTTGAACTATACAGGGAGTTCAAGGCCAAGCTGGACTAGAGACCCTGTCTAAGAGAGAGAGAGAGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023691.12 ENSMUST00000156133.8 |
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| 3UTR CCA 90 bp | AAACAAACAAACACTAAATCCAAGAAAACGACTATATCCAATATTTaGGTCTCTCAGATCCATGTCTTCAAATGTTGTGTGGATGTGTGT | + |
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Preference number: 1 (lower is better) Translates to: KQTNTKSKKTTISNI*VSQIHVFKCCVDVC Trigger: ACACACATCCACACAACATTTGAAGACATGGATCTGAGAGACCCAAATATTGGATATAGTCGTTTTCTTGGATTTAGTGTTTGTTTGTTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156133.8 |
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| 3UTR CAA 90 bp | TCCAGCTCCCGAGGCCCTGGATCAGACGGGGGCTCTGAGGCACAGTaGTCTTCAGGACTCTGCTTGCTGCCTTCAGACTCTTCGCTGATG | + |
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Preference number: 2 (lower is better) Translates to: SSSRGPGSDGGSEAQ*SSGLCLLPSDSSLM Trigger: CATCAGCGAAGAGTCTGAAGGCAGCAAGCAGAGTCCTGAAGACAACTGTGCCTCAGAGCCCCCGTCTGATCCAGGGCCTCGGGAGCTGGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000156133.8 |
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| 3UTR-3UTR CCA 90 bp | GCAGCCCAGGAGGAAGAGGAAGACCACCAGGACGGAGACTATGAGGATGATGGCAGGTGCCCCCATCCCTaGTTTATATGGTGTTGGGGA | + |
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Preference number: 2 (lower is better) Translates to: AAQEEEEDHQDGDYEDDGRCPHP*FIWCWG Trigger: TCCCCAACACCATATAAACCAGGGATGGGGGCACCT...GCCATCATCCTCATAGTCTCCGTCCTGGTGGTCTTCCTCTTCCTCCTGGGCTGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000156133.8 |
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| 3UTR-3UTR CCA 90 bp | AGGAAGAGGAAGACCACCAGGACGGAGACTATGAGGATGATGGCCACAATCCAGTCCCCAGCAGCTCTCTaGGGAGCTGAAGGGCAGAAT | + |
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Preference number: 2 (lower is better) Translates to: RKRKTTRTETMRMMATIQSPAAL*GAEGQN Trigger: ATTCTGCCCTTCAGCTCCCCAGAGAGCTGCTGGGGA...CTGGATTGTGGCCATCATCCTCATAGTCTCCGTCCTGGTGGTCTTCCTCTTCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156133.8 |
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| 3UTR CAA 90 bp | TCAGGAGGTCCAATGATGGTGTCTTCCACGGGGCAGAAGGTGACATaGACCCACTCCGAATGTTCATCCGCCAATTCAGCCCTGACTCTC | + |
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Preference number: 2 (lower is better) Translates to: SGGPMMVSSTGQKVT*THSECSSANSALTL Trigger: GAGAGTCAGGGCTGAATTGGCGGATGAACATTCGGAGTGGGTCAATGTCACCTTCTGCCCCGTGGAAGACACCATCATTGGACCTCCTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156133.8 |
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| 3UTR-3UTR TCA 90 bp | AAACGTGCTGTGATGGGGGTGGCCCAGAAACTCCTTCAGGTGCTGTGGAAGAGAGGAACCTGGGAGTCTTaGGTCAGCAGCAGAATAGGT | + |
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Preference number: 2 (lower is better) Translates to: KRAVMGVAQKLLQVLWKRGTWES*VSSRIG Trigger: ACCTATTCTGCTGCTGACTCAAGACTCCCAGGTTCC...TCTCTTCCACAGCACCTGAAGGAGTTTCTGGGCCACCCCCATCACAGCACGTTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000156133.8 |
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| 3UTR-3UTR CCA 90 bp | GGTAGGTGCCCCCATCCCTGGTTTATATGGTGTTGGGGATCGAAGCTAGGACTTCTCCTTCAGGTGCTGTaGAAGAGACGTCCCAGAACG | + |
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Preference number: 2 (lower is better) Translates to: GRCPHPWFIWCWGSKLGLLLQVL*KRRPRT Trigger: CGTTCTGGGACGTCTCTTCCACAGCACCTGAAGGAG...AAGTCCTAGCTTCGATCCCCAACACCATATAAACCAGGGATGGGGGCACCTACC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000156133.8 |
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| 3UTR CAA 90 bp | GGATCAGACGGGGGCTCTGAGGCACAGTTGTCTTCAGGACTCTGCTaGCTGCCTTCAGACTCTTCGCTGATGATGCTTAGTTTGTCGAAC | + |
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Preference number: 2 (lower is better) Translates to: GSDGGSEAQLSSGLC*LPSDSSLMMLSLSN Trigger: GTTCGACAAACTAAGCATCATCAGCGAAGAGTCTGAAGGCAGCAAGCAGAGTCCTGAAGACAACTGTGCCTCAGAGCCCCCGTCTGATCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000156133.8 |
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| 3UTR-3UTR GCA 90 bp | AAACTCCTTCAGGTGCTGTGGAAGAGACGTCCCAGAACGGAAGGTATGCTTGGTAGAACAGCAGAAACGTaGTGTGATGGGGGTGGCCCA | + |
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Preference number: 2 (lower is better) Translates to: KLLQVLWKRRPRTEGMLGRTAET*CDGGGP Trigger: TGGGCCACCCCCATCACAGCACGTTTCTGCTGTTCT...ACCAAGCATACCTTCCGTTCTGGGACGTCTCTTCCACAGCACCTGAAGGAGTTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000144215.3 ENSMUST00000156133.8 |
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| 3UTR-3UTR CCA 90 bp | AAACTCCTTCAGGTGCTGTGGAAGAGACGTCCCAGAACGGAAGGTATGCTTGGTCTCCTTCAGGTGCTGTaGAAGAGACGTCCCAGAACG | + |
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Preference number: 2 (lower is better) Translates to: KLLQVLWKRRPRTEGMLGLLQVL*KRRPRT Trigger: CGTTCTGGGACGTCTCTTCCACAGCACCTGAAGGAG...ACCAAGCATACCTTCCGTTCTGGGACGTCTCTTCCACAGCACCTGAAGGAGTTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000144215.3 ENSMUST00000156133.8 |
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| 3UTR CAA 90 bp | ACTCCACTCTCCTGTTCTGTTCTGGTCGAGAAGAAACCCTTGAACTaGAATGCAGTAAGTTGTCCACGGCTCCAGGTTCCGGAGGACCTC | + |
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Preference number: 2 (lower is better) Translates to: TPLSCSVLVEKKPLN*NAVSCPRLQVPEDL Trigger: GAGGTCCTCCGGAACCTGGAGCCGTGGACAACTTACTGCATTCAAGTTCAAGGGTTTCTTCTCGACCAGAACAGAACAGGAGAGTGGAGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000144215.3 ENSMUST00000156133.8 |
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| 3UTR CAA 90 bp | GGGTTCACTCCACTCTCCTGTTCTGTTCTGGTCGAGAAGAAACCCTaGAACTTGAATGCAGTAAGTTGTCCACGGCTCCAGGTTCCGGAG | + |
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Preference number: 2 (lower is better) Translates to: GFTPLSCSVLVEKKP*NLNAVSCPRLQVPE Trigger: CTCCGGAACCTGGAGCCGTGGACAACTTACTGCATTCAAGTTCAAGGGTTTCTTCTCGACCAGAACAGAACAGGAGAGTGGAGTGAACCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000144215.3 ENSMUST00000156133.8 |
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| 3UTR-3UTR TCA 90 bp | CGTGCTGTGATGGGGGTGGCCCAGAAACTCCTTCAGGTGCTGTGGAAGAGACGTTACGGAGACACAACTTaGAACTTCTCATTAGTCCCA | + |
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Preference number: 2 (lower is better) Translates to: RAVMGVAQKLLQVLWKRRYGDTT*NFSLVP Trigger: TGGGACTAATGAGAAGTTTCAAGTTGTGTCTCCGTA...ACGTCTCTTCCACAGCACCTGAAGGAGTTTCTGGGCCACCCCCATCACAGCACG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000144215.3 ENSMUST00000156133.8 |
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| 3UTR-3UTR GCA 90 bp | TGTGGAGGTGAGGGAGCTTCATCCTTGGACTCCAGCTCCCGAGGCCCTGGATCAGGAAGGAAATCTCTTTaGTCCTTGGGAATCCAAAAT | + |
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Preference number: 2 (lower is better) Translates to: CGGEGASSLDSSSRGPGSGRKSL*SLGIQN Trigger: ATTTTGGATTCCCAAGGAGCAAAGAGATTTCCTTCC...TGATCCAGGGCCTCGGGAGCTGGAGTCCAAGGATGAAGCTCCCTCACCTCCACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156133.8 |
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| 3UTR-3UTR CCA 90 bp | GGGTTCACTCCACTCTCCTGTTCTGTTCTGGTCGAGAAGAAACCCTTGAACTTGACGGAAAGCCAGTTGTaGAGAAGAGTCCCCAGCAGC | + |
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Preference number: 2 (lower is better) Translates to: GFTPLSCSVLVEKKPLNLTESQL*RRVPSS Trigger: GCTGCTGGGGACTCTTCTCCACAACTGGCTTTCCGT...CAAGTTCAAGGGTTTCTTCTCGACCAGAACAGAACAGGAGAGTGGAGTGAACCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156133.8 |
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| 3UTR-3UTR CCA 90 bp | TGGGTTCACTCCACTCTCCTGTTCTGTTCTGGTCGAGAAGAAACCCTTGAACTTTGTCAGAGAGACCTCTaGGTGAGTGAGCCTGAGGTC | + |
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Preference number: 2 (lower is better) Translates to: WVHSTLLFCSGREETLELCQRDL*VSEPEV Trigger: GACCTCAGGCTCACTCACCCAGAGGTCTCTCTGACA...AAGTTCAAGGGTTTCTTCTCGACCAGAACAGAACAGGAGAGTGGAGTGAACCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156133.8 |
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| 3UTR CAA 90 bp | ACTATGAGGATGATGGCCACAATCCAGGAAGGGGTTATTTCGTCATaGCCTGTCCGTTCACAGATGGGTTCACTCCACTCTCCTGTTCTG | + |
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Preference number: 2 (lower is better) Translates to: TMRMMATIQEGVISS*PVRSQMGSLHSPVL Trigger: CAGAACAGGAGAGTGGAGTGAACCCATCTGTGAACGGACAGGCAATGACGAAATAACCCCTTCCTGGATTGTGGCCATCATCCTCATAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000144215.3 ENSMUST00000156133.8 |
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| 3UTR-3UTR GCA 90 bp | TCCTTCAGGTGCTGTGGAAGAGACGTCCCAGAACGGAAGGTATGCTTGGTCTTCACCCTTGAACTTGAATaGAGTAAGTTGTCCACGGCT | + |
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Preference number: 2 (lower is better) Translates to: SFRCCGRDVPERKVCLVFTLELE*SKLSTA Trigger: AGCCGTGGACAACTTACTGCATTCAAGTTCAAGGGT...GAAGACCAAGCATACCTTCCGTTCTGGGACGTCTCTTCCACAGCACCTGAAGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000144215.3 ENSMUST00000156133.8 |
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| 3UTR-3UTR CCA 90 bp | TGGAAGAGACGTCCCAGAACGGAAGGTATGCTTGGTCTTCTTATAAATGAGCCACAACACCAGGCTGCCTaGGAAGTTTGGGCTCAGGAA | + |
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Preference number: 2 (lower is better) Translates to: WKRRPRTEGMLGLLINEPQHQAA*EVWAQE Trigger: TTCCTGAGCCCAAACTTCCCAGGCAGCCTGGTGTTG...TGGCTCATTTATAAGAAGACCAAGCATACCTTCCGTTCTGGGACGTCTCTTCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156133.8 |
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| 3UTR-3UTR TCA 90 bp | CCACTCCGAATGTTCATCCGCCAATTCAGCCCTGACTCTCACAGTGTAGTCTCCTTTCATACTGAGCTGTaGAAGTCAGGTTCGTTTTGG | + |
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Preference number: 2 (lower is better) Translates to: PLRMFIRQFSPDSHSVVSFHTEL*KSGSFW Trigger: CCAAAACGAACCTGACTTTCACAGCTCAGTATGAAA...GGAGACTACACTGTGAGAGTCAGGGCTGAATTGGCGGATGAACATTCGGAGTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156133.8 |
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| 3UTR-3UTR GCA 90 bp | ACTCCCTGTATAGTTCAAGATGACTGTGATCCTCCTGCCTCTACCTCCAAAGTGGGGCTTATAGGTAGGTaGCCCCATCCCTGGTTTATA | + |
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Preference number: 2 (lower is better) Translates to: TPCIVQDDCDPPASTSKVGLIGR*PHPWFI Trigger: TATAAACCAGGGATGGGGGCACCTACCTATAAGCCC...CACTTTGGAGGTAGAGGCAGGAGGATCACAGTCATCTTGAACTATACAGGGAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023691.12 ENSMUST00000156133.8 |
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| 3UTR CAA 90 bp | ATGAGAGAAGTCGCACTGAGTCGAGGCAGTGCGCTTGCAGTGATCTaGGAAAGACCTGTAACTTTCATACTGAGCTGTGAAAGTCAGGTT | + |
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Preference number: 2 (lower is better) Translates to: MREVALSRGSALAVI*ERPVTFILSCESQV Trigger: AACCTGACTTTCACAGCTCAGTATGAAAGTTACAGGTCTTTCCAAGATCACTGCAAGCGCACTGCCTCGACTCAGTGCGACTTCTCTCAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156133.8 |
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| 3UTR-3UTR GCA 90 bp | TGGAAGAGACGTCCCAGAACGGAAGGTATGCTTGGTCTTCTTATAAATGAGCCAGGGCTTATAGGTAGGTaGCCCCATCCCTGGTTTATA | + |
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Preference number: 2 (lower is better) Translates to: WKRRPRTEGMLGLLINEPGLIGR*PHPWFI Trigger: TATAAACCAGGGATGGGGGCACCTACCTATAAGCCC...TGGCTCATTTATAAGAAGACCAAGCATACCTTCCGTTCTGGGACGTCTCTTCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156133.8 |
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| 3UTR-3UTR TCA 90 bp | GTTCACTCCACTCTCCTGTTCTGTTCTGGTCGAGAAGAAACCCTTGAACTTGAATGGTCTTCTTATAAATaGGCCACAGCACGACAAAGC | + |
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Preference number: 2 (lower is better) Translates to: VHSTLLFCSGREETLELEWSSYK*ATARQS Trigger: GCTTTGTCGTGCTGTGGCTCATTTATAAGAAGACCA...TTCAAGTTCAAGGGTTTCTTCTCGACCAGAACAGAACAGGAGAGTGGAGTGAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000144215.3 ENSMUST00000156133.8 |
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| 3UTR CAA 90 bp | TTAAGTTTTGACGCAGTAAACTCTAAACCACTTATCACCCAGCTGTaGCCAACAGAGACGAAGTGTGGTGGTAATTACTCAACACCAGGC | + |
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Preference number: 2 (lower is better) Translates to: LSFDAVNSKPLITQL*PTETKCGGNYSTPG Trigger: GCCTGGTGTTGAGTAATTACCACCACACTTCGTCTCTGTTGGCAACAGCTGGGTGATAAGTGGTTTAGAGTTTACTGCGTCAAAACTTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156133.8 |
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| 3UTR TCA 72 bp | CTCCAGCTCCCGAGGCCCTGGATCAGACGGGGGCTCTaGGGCACAGTTGTCTTCAGGACTCTGCTTGCTGCC | + |
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Preference number: 3 (lower is better) Translates to: LQLPRPWIRRGL*GTVVFRTLLAA Trigger: GGCAGCAAGCAGAGTCCTGAAGACAACTGTGCCTCAGAGCCCCCGTCTGATCCAGGGCCTCGGGAGCTGGAG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000156133.8 |
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| 3UTR-3UTR CAA 90 bp | CGTGCTGTGATGGGGGTGGCCCAGAAACTCCTTCAGGTGCTGTGGAAGAGACGTCCCACTGAGAACCAGTaGGGGAATCCCGAGAGCTCA | + |
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Preference number: 3 (lower is better) Translates to: RAVMGVAQKLLQVLWKRRPTENQ*GNPESS Trigger: TGAGCTCTCGGGATTCCCCAACTGGTTCTCAGTGGG...ACGTCTCTTCCACAGCACCTGAAGGAGTTTCTGGGCCACCCCCATCACAGCACG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000156133.8 |
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| 3UTR TCA 72 bp | TCAGGTGGCTCTCTGGTCATACTTCTGAGGTCGACGTaGGCAGTTTGGGGTCATCGTGTGGAGGTGAGGGAG | + |
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Preference number: 3 (lower is better) Translates to: SGGSLVILLRST*AVWGHRVEVRE Trigger: CTCCCTCACCTCCACACGATGACCCCAAACTGCTCACGTCGACCTCAGAAGTATGACCAGAGAGCCACCTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156133.8 |
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| 3UTR TCA 72 bp | TGCCTGGGAAGTTTGGGCTCAGGAAGAGAATCCCACTaGGAACCAGTTGGGGAATCCCGAGAGCTCAGCCAA | + |
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Preference number: 3 (lower is better) Translates to: CLGSLGSGRESH*EPVGESRELSQ Trigger: TTGGCTGAGCTCTCGGGATTCCCCAACTGGTTCTCAGTGGGATTCTCTTCCTGAGCCCAAACTTCCCAGGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156133.8 |
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| 3UTR GCA 72 bp | GACGGGGGCTCTGAGGCACAGTTGTCTTCAGGACTCTaGTTGCTGCCTTCAGACTCTTCGCTGATGATGCTT | + |
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Preference number: 3 (lower is better) Translates to: DGGSEAQLSSGL*LLPSDSSLMML Trigger: AAGCATCATCAGCGAAGAGTCTGAAGGCAGCAAGCAGAGTCCTGAAGACAACTGTGCCTCAGAGCCCCCGTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000156133.8 |
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| 3UTR TCA 72 bp | CTGGGAGTCTTGAGTCAGCAGCAGAATAGGTCTCCCTaGAGACCCAAGAAGGACTGTCAGAGAGACCTCTGG | + |
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Preference number: 3 (lower is better) Translates to: LGVLSQQQNRSP*RPKKDCQRDLW Trigger: CCAGAGGTCTCTCTGACAGTCCTTCTTGGGTCTTCAGGGAGACCTATTCTGCTGCTGACTCAAGACTCCCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156133.8 |
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| 3UTR-3UTR CAA 90 bp | CTGGTCGAGAAGAAACCCTTGAACTTGAATGCAGTAAGTTGTCCACGGCTCCAGGGCTGCCTGGGAAGTTaGGGCTCAGGAAGAGAATCC | + |
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Preference number: 3 (lower is better) Translates to: LVEKKPLNLNAVSCPRLQGCLGS*GSGRES Trigger: GGATTCTCTTCCTGAGCCCAAACTTCCCAGGCAGCC...CTGGAGCCGTGGACAACTTACTGCATTCAAGTTCAAGGGTTTCTTCTCGACCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156133.8 |
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| 3UTR CCA 72 bp | GGGCTTATAGGTAGGTGCCCCCATCCCTGGTTTATATaGTGTTGGGGATCGAAGCTAGGACTTCATGTGTGC | + |
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Preference number: 3 (lower is better) Translates to: GLIGRCPHPWFI*CWGSKLGLHVC Trigger: GCACACATGAAGTCCTAGCTTCGATCCCCAACACCATATAAACCAGGGATGGGGGCACCTACCTATAAGCCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023691.12 ENSMUST00000156133.8 |
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| 3UTR CCA 72 bp | CGAAGTGTGGTGGTAATTACTCAACACCAGGCTGCCTaGGAAGTTTGGGCTCAGGAAGAGAATCCCACTGAG | + |
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Preference number: 3 (lower is better) Translates to: RSVVVITQHQAA*EVWAQEENPTE Trigger: CTCAGTGGGATTCTCTTCCTGAGCCCAAACTTCCCAGGCAGCCTGGTGTTGAGTAATTACCACCACACTTCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156133.8 |
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| 3UTR CCA 72 bp | CAAAGTGCTGGGCTTATAGGTAGGTGCCCCCATCCCTaGTTTATATGGTGTTGGGGATCGAAGCTAGGACTT | + |
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Preference number: 3 (lower is better) Translates to: QSAGLIGRCPHP*FIWCWGSKLGL Trigger: AAGTCCTAGCTTCGATCCCCAACACCATATAAACCAGGGATGGGGGCACCTACCTATAAGCCCAGCACTTTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023691.12 ENSMUST00000156133.8 |
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| 3UTR CCA 72 bp | GTGGTAATTACTCAACACCAGGCTGCCTGGGAAGTTTaGGCTCAGGAAGAGAATCCCACTGAGAACCAGTTG | + |
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Preference number: 3 (lower is better) Translates to: VVITQHQAAWEV*AQEENPTENQL Trigger: CAACTGGTTCTCAGTGGGATTCTCTTCCTGAGCCCAAACTTCCCAGGCAGCCTGGTGTTGAGTAATTACCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156133.8 |
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| 3UTR-3UTR CAA 90 bp | ACGGAGACTATGAGGATGATGGCCACAATCCAGGAAGGGGTTATTTCGTCATTGCTTGAATGCAGTAAGTaGTCCACGGCTCCAGGTTCC | + |
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Preference number: 3 (lower is better) Translates to: TETMRMMATIQEGVISSLLECSK*STAPGS Trigger: GGAACCTGGAGCCGTGGACAACTTACTGCATTCAAG...CAATGACGAAATAACCCCTTCCTGGATTGTGGCCATCATCCTCATAGTCTCCGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000144215.3 ENSMUST00000156133.8 |
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| 3UTR GCA 72 bp | TTCTGTTCTGGTCGAGAAGAAACCCTTGAACTTGAATaGAGTAAGTTGTCCACGGCTCCAGGTTCCGGAGGA | + |
|
Preference number: 3 (lower is better) Translates to: FCSGREETLELE*SKLSTAPGSGG Trigger: TCCTCCGGAACCTGGAGCCGTGGACAACTTACTGCATTCAAGTTCAAGGGTTTCTTCTCGACCAGAACAGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000144215.3 ENSMUST00000156133.8 |
||
| 3UTR CCA 72 bp | ATAGGTAGGTGCCCCCATCCCTGGTTTATATGGTGTTaGGGATCGAAGCTAGGACTTCATGTGTGCCAAGTA | + |
|
Preference number: 3 (lower is better) Translates to: IGRCPHPWFIWC*GSKLGLHVCQV Trigger: TACTTGGCACACATGAAGTCCTAGCTTCGATCCCCAACACCATATAAACCAGGGATGGGGGCACCTACCTAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023691.12 ENSMUST00000156133.8 |
||
| 3UTR GCA 72 bp | AAACGCAGGTGTAAAGACTCAGCAAGGGATTCTATCTaGATCTCAGGAGGTCCAATGATGGTGTCTTCCACG | + |
|
Preference number: 3 (lower is better) Translates to: KRRCKDSARDSI*ISGGPMMVSST Trigger: CGTGGAAGACACCATCATTGGACCTCCTGAGATGCAGATAGAATCCCTTGCTGAGTCTTTACACCTGCGTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156133.8 |
||
| 3UTR-3UTR CAA 90 bp | GGTAGGTGCCCCCATCCCTGGTTTATATGGTGTTGGGGATCGAAGCTAGGACTTAAATCTCTTTGCTCCTaGGGAATCCAAAATGTTCAT | + |
|
Preference number: 3 (lower is better) Translates to: GRCPHPWFIWCWGSKLGLKSLCS*GIQNVH Trigger: ATGAACATTTTGGATTCCCAAGGAGCAAAGAGATTT...AAGTCCTAGCTTCGATCCCCAACACCATATAAACCAGGGATGGGGGCACCTACC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000023691.12 ENSMUST00000156133.8 |
||
| 3UTR TCA 72 bp | TCTCTCTTAGACAGGGTCTCTAGTCCAGCTTGGCCTTaGACTCCCTGTATAGTTCAAGATGACTGTGATCCT | + |
|
Preference number: 3 (lower is better) Translates to: SLLDRVSSPAWP*TPCIVQDDCDP Trigger: AGGATCACAGTCATCTTGAACTATACAGGGAGTTCAAGGCCAAGCTGGACTAGAGACCCTGTCTAAGAGAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023691.12 ENSMUST00000156133.8 |
||
| 3UTR-3UTR CAA 90 bp | ACTCCCTGTATAGTTCAAGATGACTGTGATCCTCCTGCCTCTACCTCCAAAGTGTTAAAACCTAGCTCTTaGGTTGTGTGTACCAGTGCA | + |
|
Preference number: 3 (lower is better) Translates to: TPCIVQDDCDPPASTSKVLKPSS*VVCTSA Trigger: TGCACTGGTACACACAACCAAAGAGCTAGGTTTTAA...CACTTTGGAGGTAGAGGCAGGAGGATCACAGTCATCTTGAACTATACAGGGAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023691.12 ENSMUST00000156133.8 |
||
| 3UTR-3UTR CAA 90 bp | GTTCACTCCACTCTCCTGTTCTGTTCTGGTCGAGAAGAAACCCTTGAACTTGAACCATGTCTTCAAATGTaGTGTGGATGTGTGTGTGTG | + |
|
Preference number: 3 (lower is better) Translates to: VHSTLLFCSGREETLELEPCLQM*CGCVCV Trigger: CACACACACACATCCACACAACATTTGAAGACATGG...TTCAAGTTCAAGGGTTTCTTCTCGACCAGAACAGAACAGGAGAGTGGAGTGAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156133.8 |
||
| 3UTR CCA 72 bp | AAACACACAGGTAAGGAAGGAAATCTCTTTGCTCCTTaGGAATCCAAAATGTTCATGTCTGTCCCGCATGGG | + |
|
Preference number: 3 (lower is better) Translates to: KHTGKEGNLFAP*ESKMFMSVPHG Trigger: CCCATGCGGGACAGACATGAACATTTTGGATTCCCAAGGAGCAAAGAGATTTCCTTCCTTACCTGTGTGTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023691.12 ENSMUST00000156133.8 |
||
| 3UTR CCA 72 bp | TTTGGGTCTCTCAGATCCATGTCTTCAAATGTTGTGTaGATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG | + |
|
Preference number: 3 (lower is better) Translates to: FGSLRSMSSNVV*MCVCVCVCVCV Trigger: CACACACACACACACACACACACACACACACATCCACACAACATTTGAAGACATGGATCTGAGAGACCCAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156133.8 |
||
| 3UTR-3UTR CAA 90 bp | TTCACTCCACTCTCCTGTTCTGTTCTGGTCGAGAAGAAACCCTTGAACTTGAATGTACGGAGACACAACTaGAAACTTCTCATTAGTCCC | + |
|
Preference number: 3 (lower is better) Translates to: FTPLSCSVLVEKKPLNLNVRRHN*KLLISP Trigger: GGGACTAATGAGAAGTTTCAAGTTGTGTCTCCGTAC...ATTCAAGTTCAAGGGTTTCTTCTCGACCAGAACAGAACAGGAGAGTGGAGTGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000144215.3 ENSMUST00000156133.8 |
||
| 3UTR-3UTR CAA 90 bp | TCTGTTCTGGTCGAGAAGAAACCCTTGAACTTGAATGCAGTAAGTTGTCCACGGAAGAAACCCTTGAACTaGAATGCAGTAAGTTGTCCA | + |
|
Preference number: 3 (lower is better) Translates to: SVLVEKKPLNLNAVSCPRKKPLN*NAVSCP Trigger: TGGACAACTTACTGCATTCAAGTTCAAGGGTTTCTT...CCGTGGACAACTTACTGCATTCAAGTTCAAGGGTTTCTTCTCGACCAGAACAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000144215.3 ENSMUST00000156133.8 |
||
| CDS-3UTR CCA 90 bp | CGTGCTGTGATGGGGGTGGCCCAGAAACTCCTTCAGGTGCTGTGGAAGAGACGTCTCGCCGACCTCACCTaGCACCAGAAGGAAGCCACC | + |
|
Preference number: 4 (lower is better) Translates to: RAVMGVAQKLLQVLWKRRLADLT*HQKEAT Trigger: GGTGGCTTCCTTCTGGTGCCAGGTGAGGTCGGCGAG...ACGTCTCTTCCACAGCACCTGAAGGAGTTTCTGGGCCACCCCCATCACAGCACG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000156133.8 |
||
| 3UTR CAA 72 bp | CGAGGCCCTGGATCAGACGGGGGCTCTGAGGCACAGTaGTCTTCAGGACTCTGCTTGCTGCCTTCAGACTCT | + |
|
Preference number: 4 (lower is better) Translates to: RGPGSDGGSEAQ*SSGLCLLPSDS Trigger: AGAGTCTGAAGGCAGCAAGCAGAGTCCTGAAGACAACTGTGCCTCAGAGCCCCCGTCTGATCCAGGGCCTCG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000156133.8 |
||
| 3UTR CAA 72 bp | CTCTCTGGTCATACTTCTGAGGTCGACGTGAGCAGTTaGGGGTCATCGTGTGGAGGTGAGGGAGCTTCATCC | + |
|
Preference number: 4 (lower is better) Translates to: LSGHTSEVDVSS*GSSCGGEGASS Trigger: GGATGAAGCTCCCTCACCTCCACACGATGACCCCAAACTGCTCACGTCGACCTCAGAAGTATGACCAGAGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156133.8 |
||
| CDS-3UTR TCA 90 bp | CTGGTCGAGAAGAAACCCTTGAACTTGAATGCAGTAAGTTGTCCACGGCTCCAGAAGAGGGAGATGTGGTaGAGGGGAGCTGGCGCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: LVEKKPLNLNAVSCPRLQKREMW*RGAGAA Trigger: TGCAGCGCCAGCTCCCCTTCACCACATCTCCCTCTT...CTGGAGCCGTGGACAACTTACTGCATTCAAGTTCAAGGGTTTCTTCTCGACCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156133.8 |
||
| 3UTR CAA 72 bp | GGGGGCTCTGAGGCACAGTTGTCTTCAGGACTCTGCTaGCTGCCTTCAGACTCTTCGCTGATGATGCTTAGT | + |
|
Preference number: 4 (lower is better) Translates to: GGSEAQLSSGLC*LPSDSSLMMLS Trigger: ACTAAGCATCATCAGCGAAGAGTCTGAAGGCAGCAAGCAGAGTCCTGAAGACAACTGTGCCTCAGAGCCCCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000156133.8 |
||
| CDS-3UTR GCA 90 bp | AGTGCTGGGCTTATAGGTAGGTGCCCCCATCCCTGGTTTATATGGTGTTGGGGATCGAGGCAGTGCGCTTaGAGTGATCTTGGAAAGACC | + |
|
Preference number: 4 (lower is better) Translates to: SAGLIGRCPHPWFIWCWGSRQCA*SDLGKT Trigger: GGTCTTTCCAAGATCACTGCAAGCGCACTGCCTCGA...TCCCCAACACCATATAAACCAGGGATGGGGGCACCTACCTATAAGCCCAGCACT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023691.12 |
||
| 3UTR CAA 72 bp | GGTCGAGAAGAAACCCTTGAACTTGAATGCAGTAAGTaGTCCACGGCTCCAGGTTCCGGAGGACCTCAGAGT | + |
|
Preference number: 4 (lower is better) Translates to: GREETLELECSK*STAPGSGGPQS Trigger: ACTCTGAGGTCCTCCGGAACCTGGAGCCGTGGACAACTTACTGCATTCAAGTTCAAGGGTTTCTTCTCGACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000144215.3 ENSMUST00000156133.8 |
||
| CDS-3UTR CCA 90 bp | GAGTGTTTAAAACCTAGCTCTTTGGTTGTGTGTACCAGTGCAGCATCAGGAAGTAGGGAGCTTCATCCTTaGACTCCAGCTCCCGAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: ECLKPSSLVVCTSAASGSRELHP*TPAPEA Trigger: GGCCTCGGGAGCTGGAGTCCAAGGATGAAGCTCCCT...ACTTCCTGATGCTGCACTGGTACACACAACCAAAGAGCTAGGTTTTAAACACTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023691.12 |
||
| CDS-3UTR GCA 90 bp | AGTGCTGGGCTTATAGGTAGGTGCCCCCATCCCTGGTTTATATGGTGTTGGGGAACCCTTGAACTTGAATaGAGTAAGTTGTCCACGGCT | + |
|
Preference number: 4 (lower is better) Translates to: SAGLIGRCPHPWFIWCWGTLELE*SKLSTA Trigger: AGCCGTGGACAACTTACTGCATTCAAGTTCAAGGGT...TCCCCAACACCATATAAACCAGGGATGGGGGCACCTACCTATAAGCCCAGCACT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023691.12 |
||
| 3UTR CAA 72 bp | TCCTGTTCTGTTCTGGTCGAGAAGAAACCCTTGAACTaGAATGCAGTAAGTTGTCCACGGCTCCAGGTTCCG | + |
|
Preference number: 4 (lower is better) Translates to: SCSVLVEKKPLN*NAVSCPRLQVP Trigger: CGGAACCTGGAGCCGTGGACAACTTACTGCATTCAAGTTCAAGGGTTTCTTCTCGACCAGAACAGAACAGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000144215.3 ENSMUST00000156133.8 |
||
| 3UTR CAA 72 bp | CCACTCTCCTGTTCTGTTCTGGTCGAGAAGAAACCCTaGAACTTGAATGCAGTAAGTTGTCCACGGCTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: PLSCSVLVEKKP*NLNAVSCPRLQ Trigger: CTGGAGCCGTGGACAACTTACTGCATTCAAGTTCAAGGGTTTCTTCTCGACCAGAACAGAACAGGAGAGTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000144215.3 ENSMUST00000156133.8 |
||
| CDS-3UTR TCA 90 bp | AGTGCTGGGCTTATAGGTAGGTGCCCCCATCCCTGGTTTATATGGTGTTGGGGATTTCATACTGAGCTGTaGAAGTCAGGTTCGTTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: SAGLIGRCPHPWFIWCWGFHTEL*KSGSFW Trigger: CCAAAACGAACCTGACTTTCACAGCTCAGTATGAAA...TCCCCAACACCATATAAACCAGGGATGGGGGCACCTACCTATAAGCCCAGCACT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000023691.12 |
||
| CDS-3UTR TCA 90 bp | AGTGCTGGGCTTATAGGTAGGTGCCCCCATCCCTGGTTTATATGGTGTTGGGGATACGGAGACACAACTTaGAACTTCTCATTAGTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: SAGLIGRCPHPWFIWCWGYGDTT*NFSLVP Trigger: TGGGACTAATGAGAAGTTTCAAGTTGTGTCTCCGTA...TCCCCAACACCATATAAACCAGGGATGGGGGCACCTACCTATAAGCCCAGCACT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023691.12 |
||
| CDS-3UTR CCA 90 bp | GAGTGTTTAAAACCTAGCTCTTTGGTTGTGTGTACCAGTGCAGCATCAGGAAGTCTCCTTCAGGTGCTGTaGAAGAGACGTCCCAGAACG | + |
|
Preference number: 4 (lower is better) Translates to: ECLKPSSLVVCTSAASGSLLQVL*KRRPRT Trigger: CGTTCTGGGACGTCTCTTCCACAGCACCTGAAGGAG...ACTTCCTGATGCTGCACTGGTACACACAACCAAAGAGCTAGGTTTTAAACACTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023691.12 |
||
| CDS-3UTR TCA 90 bp | CAAGTAGAGTGTTTAAAACCTAGCTCTTTGGTTGTGTGTACCAGTGCAGCATCAGTCATCGTGTGGAGGTaGGGGAGCTTCATCCTTGGA | + |
|
Preference number: 4 (lower is better) Translates to: QVECLKPSSLVVCTSAASVIVWR*GSFILG Trigger: TCCAAGGATGAAGCTCCCTCACCTCCACACGATGAC...TGATGCTGCACTGGTACACACAACCAAAGAGCTAGGTTTTAAACACTCTACTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023691.12 |
||
| CDS-3UTR GCA 90 bp | GCAGCAAATTCCCAAGTAGAGTGTTTAAAACCTAGCTCTTTGGTTGTGTGTACCAGAACAGCAGAAACGTaGTGTGATGGGGGTGGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: AANSQVECLKPSSLVVCTRTAET*CDGGGP Trigger: TGGGCCACCCCCATCACAGCACGTTTCTGCTGTTCT...GGTACACACAACCAAAGAGCTAGGTTTTAAACACTCTACTTGGGAATTTGCTGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023691.12 |
||
| CDS-3UTR CCA 90 bp | TTCACTCCACTCTCCTGTTCTGTTCTGGTCGAGAAGAAACCCTTGAACTTGAATAAGTCAGGTTCGTTTTaGGGAAAGCAGGTACCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: FTPLSCSVLVEKKPLNLNKSGSF*GKQVPP Trigger: GGGAGGTACCTGCTTTCCCCAAAACGAACCTGACTT...ATTCAAGTTCAAGGGTTTCTTCTCGACCAGAACAGAACAGGAGAGTGGAGTGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144215.3 |
||
| CDS-3UTR TCA 90 bp | ACGGAGACTATGAGGATGATGGCCACAATCCAGGAAGGGGTTATTTCGTCATTGTTTCATACTGAGCTGTaGAAGTCAGGTTCGTTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: TETMRMMATIQEGVISSLFHTEL*KSGSFW Trigger: CCAAAACGAACCTGACTTTCACAGCTCAGTATGAAA...CAATGACGAAATAACCCCTTCCTGGATTGTGGCCATCATCCTCATAGTCTCCGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000144215.3 |
||
| CDS-3UTR CCA 90 bp | CAAGTAGAGTGTTTAAAACCTAGCTCTTTGGTTGTGTGTACCAGTGCAGCATCAAAGTCAGGTTCGTTTTaGGGAAAGCAGGTACCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: QVECLKPSSLVVCTSAASKSGSF*GKQVPP Trigger: GGGAGGTACCTGCTTTCCCCAAAACGAACCTGACTT...TGATGCTGCACTGGTACACACAACCAAAGAGCTAGGTTTTAAACACTCTACTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023691.12 |
||
| CDS-3UTR GCA 90 bp | CAAGTAGAGTGTTTAAAACCTAGCTCTTTGGTTGTGTGTACCAGTGCAGCATCAGCAAGGGATTCTATCTaGATCTCAGGAGGTCCAATG | + |
|
Preference number: 4 (lower is better) Translates to: QVECLKPSSLVVCTSAASARDSI*ISGGPM Trigger: CATTGGACCTCCTGAGATGCAGATAGAATCCCTTGC...TGATGCTGCACTGGTACACACAACCAAAGAGCTAGGTTTTAAACACTCTACTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023691.12 |
||
| CDS-3UTR TCA 90 bp | GCAGCAAATTCCCAAGTAGAGTGTTTAAAACCTAGCTCTTTGGTTGTGTGTACCTGGTCTTCTTATAAATaGGCCACAGCACGACAAAGC | + |
|
Preference number: 4 (lower is better) Translates to: AANSQVECLKPSSLVVCTWSSYK*ATARQS Trigger: GCTTTGTCGTGCTGTGGCTCATTTATAAGAAGACCA...GGTACACACAACCAAAGAGCTAGGTTTTAAACACTCTACTTGGGAATTTGCTGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023691.12 |
||
| 3UTR CAA 72 bp | CAATATTTGGGTCTCTCAGATCCATGTCTTCAAATGTaGTGTGGATGTGTGTGTGTGTGTGTGTGTGTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: QYLGLSDPCLQM*CGCVCVCVCVC Trigger: ACACACACACACACACACACACACACATCCACACAACATTTGAAGACATGGATCTGAGAGACCCAAATATTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156133.8 |
||
| CDS-3UTR CAA 90 bp | AGTGCTGGGCTTATAGGTAGGTGCCCCCATCCCTGGTTTATATGGTGTTGGGGAGGCTCTGAGGCACAGTaGTCTTCAGGACTCTGCTTG | + |
|
Preference number: 5 (lower is better) Translates to: SAGLIGRCPHPWFIWCWGGSEAQ*SSGLCL Trigger: CAAGCAGAGTCCTGAAGACAACTGTGCCTCAGAGCC...TCCCCAACACCATATAAACCAGGGATGGGGGCACCTACCTATAAGCCCAGCACT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023691.12 |
||
| CDS-3UTR CAA 90 bp | GGTAGGTGCCCCCATCCCTGGTTTATATGGTGTTGGGGATCGAAGCTAGGACTTCTTGAATGCAGTAAGTaGTCCACGGCTCCAGGTTCC | + |
|
Preference number: 5 (lower is better) Translates to: GRCPHPWFIWCWGSKLGLLECSK*STAPGS Trigger: GGAACCTGGAGCCGTGGACAACTTACTGCATTCAAG...AAGTCCTAGCTTCGATCCCCAACACCATATAAACCAGGGATGGGGGCACCTACC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023691.12 |
||
| CDS-3UTR CAA 90 bp | GAGTGTTTAAAACCTAGCTCTTTGGTTGTGTGTACCAGTGCAGCATCAGGAAGTGAGGGAGCTTCATCCTaGGACTCCAGCTCCCGAGGC | + |
|
Preference number: 5 (lower is better) Translates to: ECLKPSSLVVCTSAASGSEGASS*DSSSRG Trigger: GCCTCGGGAGCTGGAGTCCAAGGATGAAGCTCCCTC...ACTTCCTGATGCTGCACTGGTACACACAACCAAAGAGCTAGGTTTTAAACACTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023691.12 |
||
| CDS-3UTR CAA 90 bp | ACTCCCTGTATAGTTCAAGATGACTGTGATCCTCCTGCCTCTACCTCCAAAGTGGCGCTTGCAGTGATCTaGGAAAGACCTGTAACTTTC | + |
|
Preference number: 5 (lower is better) Translates to: TPCIVQDDCDPPASTSKVALAVI*ERPVTF Trigger: GAAAGTTACAGGTCTTTCCAAGATCACTGCAAGCGC...CACTTTGGAGGTAGAGGCAGGAGGATCACAGTCATCTTGAACTATACAGGGAGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023691.12 |
||
| CDS-3UTR CAA 90 bp | GAGTGTTTAAAACCTAGCTCTTTGGTTGTGTGTACCAGTGCAGCATCAGGAAGTTCTTCAGGACTCTGCTaGCTGCCTTCAGACTCTTCG | + |
|
Preference number: 5 (lower is better) Translates to: ECLKPSSLVVCTSAASGSSSGLC*LPSDSS Trigger: CGAAGAGTCTGAAGGCAGCAAGCAGAGTCCTGAAGA...ACTTCCTGATGCTGCACTGGTACACACAACCAAAGAGCTAGGTTTTAAACACTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023691.12 |
||
| CDS-3UTR CAA 90 bp | GCAGCAAATTCCCAAGTAGAGTGTTTAAAACCTAGCTCTTTGGTTGTGTGTACCCTGATGATGCTTAGTTaGTCGAACACCTCGGCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: AANSQVECLKPSSLVVCTLMMLS*SNTSAS Trigger: GGAGGCCGAGGTGTTCGACAAACTAAGCATCATCAG...GGTACACACAACCAAAGAGCTAGGTTTTAAACACTCTACTTGGGAATTTGCTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023691.12 |
||
| CDS-3UTR CAA 90 bp | GAGTGTTTAAAACCTAGCTCTTTGGTTGTGTGTACCAGTGCAGCATCAGGAAGTGTACGGAGACACAACTaGAAACTTCTCATTAGTCCC | + |
|
Preference number: 5 (lower is better) Translates to: ECLKPSSLVVCTSAASGSVRRHN*KLLISP Trigger: GGGACTAATGAGAAGTTTCAAGTTGTGTCTCCGTAC...ACTTCCTGATGCTGCACTGGTACACACAACCAAAGAGCTAGGTTTTAAACACTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023691.12 |
||
| CDS-3UTR CAA 90 bp | ACTCCCTGTATAGTTCAAGATGACTGTGATCCTCCTGCCTCTACCTCCAAAGTGAAGAAACCCTTGAACTaGAATGCAGTAAGTTGTCCA | + |
|
Preference number: 5 (lower is better) Translates to: TPCIVQDDCDPPASTSKVKKPLN*NAVSCP Trigger: TGGACAACTTACTGCATTCAAGTTCAAGGGTTTCTT...CACTTTGGAGGTAGAGGCAGGAGGATCACAGTCATCTTGAACTATACAGGGAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023691.12 |
||
| CDS CCA 72 bp | CTGGCGCTGCAGAGGACCGGGGAGAGGAAGGAGTGCTaGGGCCCCTGCTCGCCGACCTCACCTGGCACCAGA | + |
|
Preference number: 6 (lower is better) Translates to: LALQRTGERKEC*GPCSPTSPGTR Trigger: TCTGGTGCCAGGTGAGGTCGGCGAGCAGGGGCCCCAGCACTCCTTCCTCTCCCCGGTCCTCTGCAGCGCCAG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000156133.8 |
||
| CDS CCA 72 bp | TGGACATGTGAAGAGGGAGATGTGGTGAAGGGGAGCTaGCGCTGCAGAGGACCGGGGAGAGGAAGGAGTGCT | + |
|
Preference number: 6 (lower is better) Translates to: WTCEEGDVVKGS*RCRGPGRGRSA Trigger: AGCACTCCTTCCTCTCCCCGGTCCTCTGCAGCGCCAGCTCCCCTTCACCACATCTCCCTCTTCACATGTCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000156133.8 |
||