Pregenerated sensors for IKZF5 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000040167Ensembl transcript IDs: ENSMUST00000046306.15, ENSMUST00000121033.8, ENSMUST00000128432.3, ENSMUST00000154602.8, ENSMUST00000207243.2
Found 175 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TGTGAGGAGAGCCCTTTCGGCTGCTTGGCCTTTGAGACTGTGTCTTaGAGTGTTGCCCGGCCTGGCAGGGACCTCCTGGGCTCTAGCACT | + |
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Preference number: 1 (lower is better) Translates to: CEESPFGCLAFETVS*SVARPGRDLLGSST Trigger: AGTGCTAGAGCCCAGGAGGTCCCTGCCAGGCCGGGCAACACTGCAAGACACAGTCTCAAAGGCCAAGCAGCCGAAAGGGCTCTCCTCACA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046306.15 |
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| 3UTR CCA 90 bp | ACGGGCAATTATGCACAGAGGGCAGGAAAGGAGCCTCGGAGGCTCTaGAAGCATCTCAGTGGGATGATGCGCTCACTTCCTCTTTGGTCA | + |
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Preference number: 1 (lower is better) Translates to: TGNYAQRAGKEPRRL*KHLSGMMRSLPLWS Trigger: TGACCAAAGAGGAAGTGAGCGCATCATCCCACTGAGATGCTTCCAGAGCCTCCGAGGCTCCTTTCCTGCCCTCTGTGCATAATTGCCCGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046306.15 ENSMUST00000121033.8 |
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| 3UTR GCA 90 bp | ATGGCCTGCTCTGCTCTGGAGAGGCAAGGAGGCTCTGTCTGGGCATaGTCTGGGTTTGTAGCTGTTTCCTCACTTATTACGTCTCTGGGT | + |
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Preference number: 1 (lower is better) Translates to: MACSALERQGGSVWA*SGFVAVSSLITSLG Trigger: ACCCAGAGACGTAATAAGTGAGGAAACAGCTACAAACCCAGAGCATGCCCAGACAGAGCCTCCTTGCCTCTCCAGAGCAGAGCAGGCCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046306.15 ENSMUST00000121033.8 |
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| 3UTR CCA 90 bp | ACAGAGGGCAGGAAAGGAGCCTCGGAGGCTCTGGAAGCATCTCAGTaGGATGATGCGCTCACTTCCTCTTTGGTCATCAAAGACTGGGAA | + |
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Preference number: 1 (lower is better) Translates to: TEGRKGASEALEASQ*DDALTSSLVIKDWE Trigger: TTCCCAGTCTTTGATGACCAAAGAGGAAGTGAGCGCATCATCCCACTGAGATGCTTCCAGAGCCTCCGAGGCTCCTTTCCTGCCCTCTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046306.15 ENSMUST00000121033.8 |
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| 3UTR CCA 90 bp | TATAGTAGTGAGCTCCTGAATCTGACAGCAGAAAGAGAAAGATTATaGAGACCAAGCAGGAAAATGGGTAGGGAGGAGGAGCCAGGAGTC | + |
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Preference number: 1 (lower is better) Translates to: YSSELLNLTAERERL*RPSRKMGREEEPGV Trigger: GACTCCTGGCTCCTCCTCCCTACCCATTTTCCTGCTTGGTCTCCATAATCTTTCTCTTTCTGCTGTCAGATTCAGGAGCTCACTACTATA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128432.3 |
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| 3UTR CCA 90 bp | AGGCTCTGGAAGCATCTCAGTGGGATGATGCGCTCACTTCCTCTTTaGTCATCAAAGACTGGGAAGAATAAAATAATCAGTGTGGCTGTC | + |
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Preference number: 1 (lower is better) Translates to: RLWKHLSGMMRSLPL*SSKTGKNKIISVAV Trigger: GACAGCCACACTGATTATTTTATTCTTCCCAGTCTTTGATGACCAAAGAGGAAGTGAGCGCATCATCCCACTGAGATGCTTCCAGAGCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046306.15 ENSMUST00000121033.8 |
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| 3UTR CAA 90 bp | AGAGCCCTTTCGGCTGCTTGGCCTTTGAGACTGTGTCTTGCAGTGTaGCCCGGCCTGGCAGGGACCTCCTGGGCTCTAGCACTCTTCCCG | + |
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Preference number: 2 (lower is better) Translates to: RALSAAWPLRLCLAV*PGLAGTSWALALFP Trigger: CGGGAAGAGTGCTAGAGCCCAGGAGGTCCCTGCCAGGCCGGGCAACACTGCAAGACACAGTCTCAAAGGCCAAGCAGCCGAAAGGGCTCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046306.15 |
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| 3UTR-3UTR GCA 90 bp | CTGTTTGGCCCAGAACGTAGAGGTGATAAAGCTGGCTGTGAGGAGAGCCCTTTCGGCTCTGTCTGGGCATaGTCTGGGTTTGTAGCTGTT | + |
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Preference number: 2 (lower is better) Translates to: LFGPERRGDKAGCEESPFGSVWA*SGFVAV Trigger: AACAGCTACAAACCCAGAGCATGCCCAGACAGAGCC...GAAAGGGCTCTCCTCACAGCCAGCTTTATCACCTCTACGTTCTGGGCCAAACAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046306.15 |
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| 3UTR-3UTR CCA 90 bp | TCCATAAAGACTCACAGGGAGGACTTTCCATGGCCTGCTCTGCTCTGGAGAGGCTGTCTGGGCATGCTCTaGGTTTGTAGCTGTTTCCTC | + |
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Preference number: 2 (lower is better) Translates to: SIKTHREDFPWPALLWRGCLGML*VCSCFL Trigger: GAGGAAACAGCTACAAACCCAGAGCATGCCCAGACA...GCCTCTCCAGAGCAGAGCAGGCCATGGAAAGTCCTCCCTGTGAGTCTTTATGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046306.15 ENSMUST00000121033.8 |
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| 3UTR-3UTR GCA 90 bp | TCCATAAAGACTCACAGGGAGGACTTTCCATGGCCTGCTCTGCTCTGGAGAGGCCATTACGGGCAATTATaGACAGAGGGCAGGAAAGGA | + |
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Preference number: 2 (lower is better) Translates to: SIKTHREDFPWPALLWRGHYGQL*TEGRKG Trigger: TCCTTTCCTGCCCTCTGTGCATAATTGCCCGTAATG...GCCTCTCCAGAGCAGAGCAGGCCATGGAAAGTCCTCCCTGTGAGTCTTTATGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046306.15 ENSMUST00000121033.8 |
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| 3UTR-3UTR TCA 90 bp | TCCATAAAGACTCACAGGGAGGACTTTCCATGGCCTGCTCTGCTCTGGAGAGGCTCTCATAGGTGTAAATaGAAAAGACAGCAATGCATC | + |
|
Preference number: 2 (lower is better) Translates to: SIKTHREDFPWPALLWRGSHRCK*KRQQCI Trigger: GATGCATTGCTGTCTTTTTCATTTACACCTATGAGA...GCCTCTCCAGAGCAGAGCAGGCCATGGAAAGTCCTCCCTGTGAGTCTTTATGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046306.15 ENSMUST00000121033.8 |
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| 3UTR-3UTR GCA 90 bp | AGGCAAGGAGGCTCTGTCTGGGCATGCTCTGGGTTTGTAGCTGTTTCCTCACTTCCAGTAACAGGTGAATaGAGAATTTACATGAAAGAT | + |
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Preference number: 2 (lower is better) Translates to: RQGGSVWACSGFVAVSSLPVTGE*RIYMKD Trigger: ATCTTTCATGTAAATTCTGCATTCACCTGTTACTGG...AAGTGAGGAAACAGCTACAAACCCAGAGCATGCCCAGACAGAGCCTCCTTGCCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046306.15 ENSMUST00000121033.8 |
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| 3UTR-3UTR GCA 90 bp | GGCATGCTCTGGGTTTGTAGCTGTTTCCTCACTTATTACGTCTCTGGGTTTCTACCAGTAACAGGTGAATaGAGAATTTACATGAAAGAT | + |
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Preference number: 2 (lower is better) Translates to: GMLWVCSCFLTYYVSGFLPVTGE*RIYMKD Trigger: ATCTTTCATGTAAATTCTGCATTCACCTGTTACTGG...TAGAAACCCAGAGACGTAATAAGTGAGGAAACAGCTACAAACCCAGAGCATGCC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046306.15 ENSMUST00000121033.8 |
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| 3UTR-3UTR CCA 90 bp | AGTGCACTCTACAGAAGCCTTTCTATTTTCTATAGTAGTGAGCTCCTGAATCTGGAAAGAGAAAGATTATaGAGACCAAGCAGGAAAATG | + |
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Preference number: 2 (lower is better) Translates to: SALYRSLSIFYSSELLNLERERL*RPSRKM Trigger: CATTTTCCTGCTTGGTCTCCATAATCTTTCTCTTTC...CAGATTCAGGAGCTCACTACTATAGAAAATAGAAAGGCTTCTGTAGAGTGCACT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000128432.3 |
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| 3UTR CCA 72 bp | TGTCTTGCAGTGTTGCCCGGCCTGGCAGGGACCTCCTaGGCTCTAGCACTCTTCCCGCCTCTGCTTCAAGCA | + |
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Preference number: 3 (lower is better) Translates to: CLAVLPGLAGTS*ALALFPPLLQA Trigger: TGCTTGAAGCAGAGGCGGGAAGAGTGCTAGAGCCCAGGAGGTCCCTGCCAGGCCGGGCAACACTGCAAGACA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046306.15 |
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| 3UTR CCA 72 bp | CCAAGACTGGCTGTGTACGCACAGGCACCCTCGGAATaGCTTTCCAGCACAGGGAGGGAGAGCAGGTCCATT | + |
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Preference number: 3 (lower is better) Translates to: PRLAVYAQAPSE*LSSTGRESRSI Trigger: AATGGACCTGCTCTCCCTCCCTGTGCTGGAAAGCCATTCCGAGGGTGCCTGTGCGTACACAGCCAGTCTTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046306.15 |
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| 3UTR CCA 72 bp | TATGCACAGAGGGCAGGAAAGGAGCCTCGGAGGCTCTaGAAGCATCTCAGTGGGATGATGCGCTCACTTCCT | + |
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Preference number: 3 (lower is better) Translates to: YAQRAGKEPRRL*KHLSGMMRSLP Trigger: AGGAAGTGAGCGCATCATCCCACTGAGATGCTTCCAGAGCCTCCGAGGCTCCTTTCCTGCCCTCTGTGCATA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046306.15 ENSMUST00000121033.8 |
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| 3UTR CCA 72 bp | CTGCGCTTTAACAGTGCAGTTGGGAGGAGCCAAGACTaGCTGTGTACGCACAGGCACCCTCGGAATGGCTTT | + |
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Preference number: 3 (lower is better) Translates to: LRFNSAVGRSQD*LCTHRHPRNGF Trigger: AAAGCCATTCCGAGGGTGCCTGTGCGTACACAGCCAGTCTTGGCTCCTCCCAACTGCACTGTTAAAGCGCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046306.15 |
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| 3UTR-3UTR CAA 90 bp | AGTTGGGAGGAGCCAAGACTGGCTGTGTACGCACAGGCACCCTCGGAATGGCTTGCGCTCACTTCCTCTTaGGTCATCAAAGACTGGGAA | + |
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Preference number: 3 (lower is better) Translates to: SWEEPRLAVYAQAPSEWLALTSS*VIKDWE Trigger: TTCCCAGTCTTTGATGACCAAAGAGGAAGTGAGCGC...AAGCCATTCCGAGGGTGCCTGTGCGTACACAGCCAGTCTTGGCTCCTCCCAACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046306.15 |
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| 3UTR GCA 72 bp | TCTAGACCAACCCTTCGTGGACATTACGGGCAATTATaGACAGAGGGCAGGAAAGGAGCCTCGGAGGCTCTG | + |
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Preference number: 3 (lower is better) Translates to: SRPTLRGHYGQL*TEGRKGASEAL Trigger: CAGAGCCTCCGAGGCTCCTTTCCTGCCCTCTGTGCATAATTGCCCGTAATGTCCACGAAGGGTTGGTCTAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046306.15 ENSMUST00000121033.8 |
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| 3UTR CCA 72 bp | AGGGCAAGGCGTGCTTTGGAAGGTTTCTCCAAAGGGTaGCTAAGAGCGACCTGGGTTAGCCAGTGCACTCTA | + |
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Preference number: 3 (lower is better) Translates to: RARRALEGFSKG*LRATWVSQCTL Trigger: TAGAGTGCACTGGCTAACCCAGGTCGCTCTTAGCCACCCTTTGGAGAAACCTTCCAAAGCACGCCTTGCCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128432.3 |
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| 3UTR-3UTR CAA 90 bp | AGGCAAGGAGGCTCTGTCTGGGCATGCTCTGGGTTTGTAGCTGTTTCCTCACTTGCGCTCACTTCCTCTTaGGTCATCAAAGACTGGGAA | + |
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Preference number: 3 (lower is better) Translates to: RQGGSVWACSGFVAVSSLALTSS*VIKDWE Trigger: TTCCCAGTCTTTGATGACCAAAGAGGAAGTGAGCGC...AAGTGAGGAAACAGCTACAAACCCAGAGCATGCCCAGACAGAGCCTCCTTGCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046306.15 ENSMUST00000121033.8 |
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| 3UTR-3UTR CAA 90 bp | TCCATAAAGACTCACAGGGAGGACTTTCCATGGCCTGCTCTGCTCTGGAGAGGCGAGAAGTGTGCCATTTaGACATATGGCAGAAAGAAC | + |
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Preference number: 3 (lower is better) Translates to: SIKTHREDFPWPALLWRGEKCAI*TYGRKN Trigger: GTTCTTTCTGCCATATGTCAAAATGGCACACTTCTC...GCCTCTCCAGAGCAGAGCAGGCCATGGAAAGTCCTCCCTGTGAGTCTTTATGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046306.15 ENSMUST00000121033.8 |
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| 3UTR GCA 72 bp | CAACAGACCAAAATCACTAGAAAGTGTCTTCGGGGCTaGGCTTTAACAGTGCAGTTGGGAGGAGCCAAGACT | + |
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Preference number: 3 (lower is better) Translates to: QQTKITRKCLRG*ALTVQLGGAKT Trigger: AGTCTTGGCTCCTCCCAACTGCACTGTTAAAGCGCAGCCCCGAAGACACTTTCTAGTGATTTTGGTCTGTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046306.15 |
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| 3UTR CCA 72 bp | TCAAGCAGCTGGGACTACAGATGTGCGGCAGTACACTaGGCTTCTTCCTCTTTTGGGAAGTTTTCACTGTCT | + |
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Preference number: 3 (lower is better) Translates to: SSSWDYRCAAVH*ASSSFGKFSLS Trigger: AGACAGTGAAAACTTCCCAAAAGAGGAAGAAGCCCAGTGTACTGCCGCACATCTGTAGTCCCAGCTGCTTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046306.15 |
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| 3UTR CCA 72 bp | GAGCTCCTGAATCTGACAGCAGAAAGAGAAAGATTATaGAGACCAAGCAGGAAAATGGGTAGGGAGGAGGAG | + |
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Preference number: 3 (lower is better) Translates to: ELLNLTAERERL*RPSRKMGREEE Trigger: CTCCTCCTCCCTACCCATTTTCCTGCTTGGTCTCCATAATCTTTCTCTTTCTGCTGTCAGATTCAGGAGCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128432.3 |
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| 3UTR GCA 72 bp | CAGAAACCAATAGTAAGTGACAATGTTTTATTGTTTTaGCAGGCTCTCTTCAGAGTAAGCTACTTATTACAC | + |
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Preference number: 3 (lower is better) Translates to: QKPIVSDNVLLF*QALFRVSYLLH Trigger: GTGTAATAAGTAGCTTACTCTGAAGAGAGCCTGGCAAAACAATAAAACATTGTCACTTACTATTGGTTTCTG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046306.15 |
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| CDS-3UTR CCA 90 bp | GGGAGGAGCCAAGACTGGCTGTGTACGCACAGGCACCCTCGGAATGGCTTTCCACGGCAGGGTTGGAGCTaGAGTGCTTGGCTGGCTGTT | + |
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Preference number: 4 (lower is better) Translates to: GRSQDWLCTHRHPRNGFPRQGWS*SAWLAV Trigger: AACAGCCAGCCAAGCACTCCAGCTCCAACCCTGCCG...TGGAAAGCCATTCCGAGGGTGCCTGTGCGTACACAGCCAGTCTTGGCTCCTCCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046306.15 |
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| 3UTR CAA 72 bp | CTGGCTGTGAGGAGAGCCCTTTCGGCTGCTTGGCCTTaGAGACTGTGTCTTGCAGTGTTGCCCGGCCTGGCA | + |
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Preference number: 4 (lower is better) Translates to: LAVRRALSAAWP*RLCLAVLPGLA Trigger: TGCCAGGCCGGGCAACACTGCAAGACACAGTCTCAAAGGCCAAGCAGCCGAAAGGGCTCTCCTCACAGCCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046306.15 |
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| CDS-3UTR GCA 90 bp | GGGCAATTATGCACAGAGGGCAGGAAAGGAGCCTCGGAGGCTCTGGAAGCATCTGGGCACTTGGTTCACTaGTGGGCCCTGCCACTGGAC | + |
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Preference number: 4 (lower is better) Translates to: GQLCTEGRKGASEALEASGHLVH*WALPLD Trigger: GTCCAGTGGCAGGGCCCAGCAGTGAACCAAGTGCCC...AGATGCTTCCAGAGCCTCCGAGGCTCCTTTCCTGCCCTCTGTGCATAATTGCCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046306.15 ENSMUST00000121033.8 |
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| CDS-3UTR TCA 90 bp | GGGAGGAGCCAAGACTGGCTGTGTACGCACAGGCACCCTCGGAATGGCTTTCCATGCAGTACCGACACTTaGGCTTCCCATCGAAGGTCC | + |
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Preference number: 4 (lower is better) Translates to: GRSQDWLCTHRHPRNGFPCSTDT*ASHRRS Trigger: GGACCTTCGATGGGAAGCTCAAGTGTCGGTACTGCA...TGGAAAGCCATTCCGAGGGTGCCTGTGCGTACACAGCCAGTCTTGGCTCCTCCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046306.15 |
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| CDS-3UTR GCA 90 bp | GGGAGGAGCCAAGACTGGCTGTGTACGCACAGGCACCCTCGGAATGGCTTTCCAGGGTTGGAGCTGGAGTaGTTGGCTGGCTGTTTCCTA | + |
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Preference number: 4 (lower is better) Translates to: GRSQDWLCTHRHPRNGFPGLELE*LAGCFL Trigger: TAGGAAACAGCCAGCCAAGCACTCCAGCTCCAACCC...TGGAAAGCCATTCCGAGGGTGCCTGTGCGTACACAGCCAGTCTTGGCTCCTCCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046306.15 |
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| CDS-3UTR CCA 90 bp | AGTTGGGAGGAGCCAAGACTGGCTGTGTACGCACAGGCACCCTCGGAATGGCTTTTCTTGGGGGTCCCTTaGCAGGCCACCAGTTGGTGT | + |
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Preference number: 4 (lower is better) Translates to: SWEEPRLAVYAQAPSEWLFLGVP*QATSWC Trigger: ACACCAACTGGTGGCCTGCCAAGGGACCCCCAAGAA...AAGCCATTCCGAGGGTGCCTGTGCGTACACAGCCAGTCTTGGCTCCTCCCAACT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000046306.15 |
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| CDS-3UTR CCA 90 bp | GGGAGGAGCCAAGACTGGCTGTGTACGCACAGGCACCCTCGGAATGGCTTTCCAGCTGGAGTGCTTGGCTaGCTGTTTCCTATGCTGGGA | + |
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Preference number: 4 (lower is better) Translates to: GRSQDWLCTHRHPRNGFPAGVLG*LFPMLG Trigger: TCCCAGCATAGGAAACAGCCAGCCAAGCACTCCAGC...TGGAAAGCCATTCCGAGGGTGCCTGTGCGTACACAGCCAGTCTTGGCTCCTCCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046306.15 |
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| CDS-3UTR CCA 90 bp | TCCATAAAGACTCACAGGGAGGACTTTCCATGGCCTGCTCTGCTCTGGAGAGGCCTGCACCGGCAGGGTTaGAGCTGGAGTGCTTGGCTG | + |
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Preference number: 4 (lower is better) Translates to: SIKTHREDFPWPALLWRGLHRQG*SWSAWL Trigger: CAGCCAAGCACTCCAGCTCCAACCCTGCCGGTGCAG...GCCTCTCCAGAGCAGAGCAGGCCATGGAAAGTCCTCCCTGTGAGTCTTTATGGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046306.15 ENSMUST00000121033.8 |
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| CDS-3UTR CCA 90 bp | GGGCAATTATGCACAGAGGGCAGGAAAGGAGCCTCGGAGGCTCTGGAAGCATCTCACTTGGTTCACTGCTaGGCCCTGCCACTGGACTGT | + |
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Preference number: 4 (lower is better) Translates to: GQLCTEGRKGASEALEASHLVHC*ALPLDC Trigger: ACAGTCCAGTGGCAGGGCCCAGCAGTGAACCAAGTG...AGATGCTTCCAGAGCCTCCGAGGCTCCTTTCCTGCCCTCTGTGCATAATTGCCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046306.15 ENSMUST00000121033.8 |
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| CDS-3UTR CCA 90 bp | TCCATAAAGACTCACAGGGAGGACTTTCCATGGCCTGCTCTGCTCTGGAGAGGCACTGGTGTGGGCACTTaGTTCACTGCTGGGCCCTGC | + |
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Preference number: 4 (lower is better) Translates to: SIKTHREDFPWPALLWRGTGVGT*FTAGPC Trigger: GCAGGGCCCAGCAGTGAACCAAGTGCCCACACCAGT...GCCTCTCCAGAGCAGAGCAGGCCATGGAAAGTCCTCCCTGTGAGTCTTTATGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046306.15 ENSMUST00000121033.8 |
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| CDS-3UTR TCA 90 bp | GGAAAGGAGCCTCGGAGGCTCTGGAAGCATCTCAGTGGGATGATGCGCTCACTTGTGGGGGAGGAGCTCTaGGGAATACTTGCTGACACA | + |
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Preference number: 4 (lower is better) Translates to: GKEPRRLWKHLSGMMRSLVGEEL*GILADT Trigger: TGTGTCAGCAAGTATTCCTCAGAGCTCCTCCCCCAC...AAGTGAGCGCATCATCCCACTGAGATGCTTCCAGAGCCTCCGAGGCTCCTTTCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000046306.15 ENSMUST00000121033.8 |
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| CDS-3UTR GCA 90 bp | GGGCAATTATGCACAGAGGGCAGGAAAGGAGCCTCGGAGGCTCTGGAAGCATCTGCCTGGCCGTTCCTTTaGTGGCATAGTTGCAGTACC | + |
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Preference number: 4 (lower is better) Translates to: GQLCTEGRKGASEALEASAWPFL*WHSCST Trigger: GGTACTGCAACTATGCCAGCAAAGGAACGGCCAGGC...AGATGCTTCCAGAGCCTCCGAGGCTCCTTTCCTGCCCTCTGTGCATAATTGCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046306.15 ENSMUST00000121033.8 |
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| CDS-3UTR CCA 90 bp | GGGCAATTATGCACAGAGGGCAGGAAAGGAGCCTCGGAGGCTCTGGAAGCATCTTCAACCATGAGTTCTTaGGGGTCCCTTGGCAGGCCA | + |
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Preference number: 4 (lower is better) Translates to: GQLCTEGRKGASEALEASSTMSS*GSLGRP Trigger: TGGCCTGCCAAGGGACCCCCAAGAACTCATGGTTGA...AGATGCTTCCAGAGCCTCCGAGGCTCCTTTCCTGCCCTCTGTGCATAATTGCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046306.15 |
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| CDS-3UTR CCA 90 bp | CTGTTTGGCCCAGAACGTAGAGGTGATAAAGCTGGCTGTGAGGAGAGCCCTTTCGCGGTTCCGGACTTGTaGGGGAGGAGCTCTGAGGAA | + |
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Preference number: 4 (lower is better) Translates to: LFGPERRGDKAGCEESPFAVPDL*GRSSEE Trigger: TTCCTCAGAGCTCCTCCCCCACAAGTCCGGAACCGC...GAAAGGGCTCTCCTCACAGCCAGCTTTATCACCTCTACGTTCTGGGCCAAACAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046306.15 |
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| CDS-3UTR CCA 90 bp | TCCATAAAGACTCACAGGGAGGACTTTCCATGGCCTGCTCTGCTCTGGAGAGGCCACTTGGTTCACTGCTaGGCCCTGCCACTGGACTGT | + |
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Preference number: 4 (lower is better) Translates to: SIKTHREDFPWPALLWRGHLVHC*ALPLDC Trigger: ACAGTCCAGTGGCAGGGCCCAGCAGTGAACCAAGTG...GCCTCTCCAGAGCAGAGCAGGCCATGGAAAGTCCTCCCTGTGAGTCTTTATGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046306.15 ENSMUST00000121033.8 |
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| CDS-3UTR CCA 90 bp | AGTTGGGAGGAGCCAAGACTGGCTGTGTACGCACAGGCACCCTCGGAATGGCTTCTATGCTGGGAGTACTaGTGTGGGCACTTGGTTCAC | + |
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Preference number: 4 (lower is better) Translates to: SWEEPRLAVYAQAPSEWLLCWEY*CGHLVH Trigger: GTGAACCAAGTGCCCACACCAGTACTCCCAGCATAG...AAGCCATTCCGAGGGTGCCTGTGCGTACACAGCCAGTCTTGGCTCCTCCCAACT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046306.15 |
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| 3UTR CAA 72 bp | AGAAAGTGTCTTCGGGGCTGCGCTTTAACAGTGCAGTaGGGAGGAGCCAAGACTGGCTGTGTACGCACAGGC | + |
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Preference number: 4 (lower is better) Translates to: RKCLRGCALTVQ*GGAKTGCVRTG Trigger: GCCTGTGCGTACACAGCCAGTCTTGGCTCCTCCCAACTGCACTGTTAAAGCGCAGCCCCGAAGACACTTTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046306.15 |
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| CDS-3UTR CCA 90 bp | GGAAAGGAGCCTCGGAGGCTCTGGAAGCATCTCAGTGGGATGATGCGCTCACTTCTATGCTGGGAGTACTaGTGTGGGCACTTGGTTCAC | + |
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Preference number: 4 (lower is better) Translates to: GKEPRRLWKHLSGMMRSLLCWEY*CGHLVH Trigger: GTGAACCAAGTGCCCACACCAGTACTCCCAGCATAG...AAGTGAGCGCATCATCCCACTGAGATGCTTCCAGAGCCTCCGAGGCTCCTTTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046306.15 ENSMUST00000121033.8 |
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| CDS-3UTR TCA 90 bp | GGGAGGAGCCAAGACTGGCTGTGTACGCACAGGCACCCTCGGAATGGCTTTCCATTTGTCCCCACTAACTaGTCCCGAAATCATGTTCAC | + |
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Preference number: 4 (lower is better) Translates to: GRSQDWLCTHRHPRNGFPFVPTN*SRNHVH Trigger: GTGAACATGATTTCGGGATCAGTTAGTGGGGACAAA...TGGAAAGCCATTCCGAGGGTGCCTGTGCGTACACAGCCAGTCTTGGCTCCTCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046306.15 |
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| CDS-3UTR TCA 90 bp | AACCCTTCGTGGACATTACGGGCAATTATGCACAGAGGGCAGGAAAGGAGCCTCTGCAGTACCGACACTTaGGCTTCCCATCGAAGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: NPSWTLRAIMHRGQERSLCSTDT*ASHRRS Trigger: GGACCTTCGATGGGAAGCTCAAGTGTCGGTACTGCA...GAGGCTCCTTTCCTGCCCTCTGTGCATAATTGCCCGTAATGTCCACGAAGGGTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046306.15 ENSMUST00000121033.8 |
||
| CDS-3UTR TCA 90 bp | TCCATAAAGACTCACAGGGAGGACTTTCCATGGCCTGCTCTGCTCTGGAGAGGCAAGGGTTGTCAACCATaGGTTCTTGGGGGTCCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: SIKTHREDFPWPALLWRGKGCQP*VLGGPL Trigger: CAAGGGACCCCCAAGAACTCATGGTTGACAACCCTT...GCCTCTCCAGAGCAGAGCAGGCCATGGAAAGTCCTCCCTGTGAGTCTTTATGGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000046306.15 |
||
| CDS-3UTR TCA 90 bp | GGGAGGAGCCAAGACTGGCTGTGTACGCACAGGCACCCTCGGAATGGCTTTCCAGCTAAAGTAGAGAGCTaGTTCAAAGGGTTGTCAACC | + |
|
Preference number: 4 (lower is better) Translates to: GRSQDWLCTHRHPRNGFPAKVES*FKGLST Trigger: GGTTGACAACCCTTTGAATCAGCTCTCTACTTTAGC...TGGAAAGCCATTCCGAGGGTGCCTGTGCGTACACAGCCAGTCTTGGCTCCTCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046306.15 |
||
| CDS-3UTR TCA 90 bp | AGGCAAGGAGGCTCTGTCTGGGCATGCTCTGGGTTTGTAGCTGTTTCCTCACTTGTGGGGGAGGAGCTCTaGGGAATACTTGCTGACACA | + |
|
Preference number: 4 (lower is better) Translates to: RQGGSVWACSGFVAVSSLVGEEL*GILADT Trigger: TGTGTCAGCAAGTATTCCTCAGAGCTCCTCCCCCAC...AAGTGAGGAAACAGCTACAAACCCAGAGCATGCCCAGACAGAGCCTCCTTGCCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000046306.15 ENSMUST00000121033.8 |
||
| CDS-3UTR TCA 90 bp | GGGAGGAGCCAAGACTGGCTGTGTACGCACAGGCACCCTCGGAATGGCTTTCCATGCCCTCTTGCAAAATaGCAGGCAAAATCGTACTTG | + |
|
Preference number: 4 (lower is better) Translates to: GRSQDWLCTHRHPRNGFPCPLAK*QAKSYL Trigger: CAAGTACGATTTTGCCTGTCATTTTGCAAGAGGGCA...TGGAAAGCCATTCCGAGGGTGCCTGTGCGTACACAGCCAGTCTTGGCTCCTCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046306.15 |
||
| CDS-3UTR GCA 90 bp | AACCCTTCGTGGACATTACGGGCAATTATGCACAGAGGGCAGGAAAGGAGCCTCGCCTGGCCGTTCCTTTaGTGGCATAGTTGCAGTACC | + |
|
Preference number: 4 (lower is better) Translates to: NPSWTLRAIMHRGQERSLAWPFL*WHSCST Trigger: GGTACTGCAACTATGCCAGCAAAGGAACGGCCAGGC...GAGGCTCCTTTCCTGCCCTCTGTGCATAATTGCCCGTAATGTCCACGAAGGGTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046306.15 ENSMUST00000121033.8 |
||
| CDS-3UTR GCA 90 bp | AACCCTTCGTGGACATTACGGGCAATTATGCACAGAGGGCAGGAAAGGAGCCTCTTCACTGCTGGGCCCTaGCACTGGACTGTAGTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: NPSWTLRAIMHRGQERSLFTAGP*HWTVVP Trigger: AGGAACTACAGTCCAGTGGCAGGGCCCAGCAGTGAA...GAGGCTCCTTTCCTGCCCTCTGTGCATAATTGCCCGTAATGTCCACGAAGGGTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046306.15 ENSMUST00000121033.8 |
||
| CDS-3UTR GCA 90 bp | AGGCAAGGAGGCTCTGTCTGGGCATGCTCTGGGTTTGTAGCTGTTTCCTCACTTGCTGGCTGTTTCCTATaGTGGGAGTACTGGTGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: RQGGSVWACSGFVAVSSLAGCFL*WEYWCG Trigger: CCCACACCAGTACTCCCAGCATAGGAAACAGCCAGC...AAGTGAGGAAACAGCTACAAACCCAGAGCATGCCCAGACAGAGCCTCCTTGCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046306.15 ENSMUST00000121033.8 |
||
| CDS-3UTR CCA 90 bp | TCCATAAAGACTCACAGGGAGGACTTTCCATGGCCTGCTCTGCTCTGGAGAGGCTGTTTGCGCCTTCGATaGTGGGACAGGTTACTTCGG | + |
|
Preference number: 4 (lower is better) Translates to: SIKTHREDFPWPALLWRGCLRLR*WDRLLR Trigger: CCGAAGTAACCTGTCCCACCATCGAAGGCGCAAACA...GCCTCTCCAGAGCAGAGCAGGCCATGGAAAGTCCTCCCTGTGAGTCTTTATGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046306.15 |
||
| CDS-3UTR CCA 90 bp | AGGCAAGGAGGCTCTGTCTGGGCATGCTCTGGGTTTGTAGCTGTTTCCTCACTTGGCTGTTTCCTATGCTaGGAGTACTGGTGTGGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: RQGGSVWACSGFVAVSSLGCFLC*EYWCGH Trigger: GTGCCCACACCAGTACTCCCAGCATAGGAAACAGCC...AAGTGAGGAAACAGCTACAAACCCAGAGCATGCCCAGACAGAGCCTCCTTGCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046306.15 ENSMUST00000121033.8 |
||
| CDS-3UTR CCA 90 bp | TCCATAAAGACTCACAGGGAGGACTTTCCATGGCCTGCTCTGCTCTGGAGAGGCTGGAGCTGGAGTGCTTaGCTGGCTGTTTCCTATGCT | + |
|
Preference number: 4 (lower is better) Translates to: SIKTHREDFPWPALLWRGWSWSA*LAVSYA Trigger: AGCATAGGAAACAGCCAGCCAAGCACTCCAGCTCCA...GCCTCTCCAGAGCAGAGCAGGCCATGGAAAGTCCTCCCTGTGAGTCTTTATGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046306.15 ENSMUST00000121033.8 |
||
| CDS-3UTR TCA 90 bp | GGGCAATTATGCACAGAGGGCAGGAAAGGAGCCTCGGAGGCTCTGGAAGCATCTAGGGTTGCTGAATCATaGAAGGCTTTTCATCAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: GQLCTEGRKGASEALEASRVAES*KAFHQG Trigger: GCCCTGATGAAAAGCCTTTCATGATTCAGCAACCCT...AGATGCTTCCAGAGCCTCCGAGGCTCCTTTCCTGCCCTCTGTGCATAATTGCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046306.15 ENSMUST00000121033.8 |
||
| CDS-3UTR GCA 90 bp | GGCATGCTCTGGGTTTGTAGCTGTTTCCTCACTTATTACGTCTCTGGGTTTCTAGGGCACTTGGTTCACTaGTGGGCCCTGCCACTGGAC | + |
|
Preference number: 4 (lower is better) Translates to: GMLWVCSCFLTYYVSGFLGHLVH*WALPLD Trigger: GTCCAGTGGCAGGGCCCAGCAGTGAACCAAGTGCCC...TAGAAACCCAGAGACGTAATAAGTGAGGAAACAGCTACAAACCCAGAGCATGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046306.15 ENSMUST00000121033.8 |
||
| CDS-3UTR CCA 90 bp | CTGTTTGGCCCAGAACGTAGAGGTGATAAAGCTGGCTGTGAGGAGAGCCCTTTCTTGCGCCTTCGATGGTaGGACAGGTTACTTCGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: LFGPERRGDKAGCEESPFLRLRW*DRLLRS Trigger: TGACCGAAGTAACCTGTCCCACCATCGAAGGCGCAA...GAAAGGGCTCTCCTCACAGCCAGCTTTATCACCTCTACGTTCTGGGCCAAACAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046306.15 |
||
| CDS-3UTR CCA 90 bp | GGGCAATTATGCACAGAGGGCAGGAAAGGAGCCTCGGAGGCTCTGGAAGCATCTAGGGTTTTGGTTTTCTaGTGGCAAGCTGGACAACTG | + |
|
Preference number: 4 (lower is better) Translates to: GQLCTEGRKGASEALEASRVLVF*WQAGQL Trigger: CAGTTGTCCAGCTTGCCACCAGAAAACCAAAACCCT...AGATGCTTCCAGAGCCTCCGAGGCTCCTTTCCTGCCCTCTGTGCATAATTGCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046306.15 ENSMUST00000121033.8 |
||
| CDS-3UTR CCA 90 bp | AACCCTTCGTGGACATTACGGGCAATTATGCACAGAGGGCAGGAAAGGAGCCTCTGGAGCTGGAGTGCTTaGCTGGCTGTTTCCTATGCT | + |
|
Preference number: 4 (lower is better) Translates to: NPSWTLRAIMHRGQERSLWSWSA*LAVSYA Trigger: AGCATAGGAAACAGCCAGCCAAGCACTCCAGCTCCA...GAGGCTCCTTTCCTGCCCTCTGTGCATAATTGCCCGTAATGTCCACGAAGGGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046306.15 ENSMUST00000121033.8 |
||
| CDS-3UTR TCA 90 bp | AGGCAAGGAGGCTCTGTCTGGGCATGCTCTGGGTTTGTAGCTGTTTCCTCACTTGAAATCATGTTCACATaGTGCGTCTGCTGGGTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: RQGGSVWACSGFVAVSSLEIMFT*CVCWVR Trigger: CCTGACCCAGCAGACGCATCATGTGAACATGATTTC...AAGTGAGGAAACAGCTACAAACCCAGAGCATGCCCAGACAGAGCCTCCTTGCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046306.15 ENSMUST00000121033.8 |
||
| CDS-3UTR TCA 90 bp | AACCCTTCGTGGACATTACGGGCAATTATGCACAGAGGGCAGGAAAGGAGCCTCCTGAGGAATACTTGCTaGCACAGCAGAGACAACTGC | + |
|
Preference number: 4 (lower is better) Translates to: NPSWTLRAIMHRGQERSLLRNTC*HSRDNC Trigger: GCAGTTGTCTCTGCTGTGTCAGCAAGTATTCCTCAG...GAGGCTCCTTTCCTGCCCTCTGTGCATAATTGCCCGTAATGTCCACGAAGGGTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046306.15 ENSMUST00000121033.8 |
||
| CDS-3UTR GCA 90 bp | AACCCTTCGTGGACATTACGGGCAATTATGCACAGAGGGCAGGAAAGGAGCCTCGGTTACTTCGGTCACTaGAGCGGAAGGAGCACAATT | + |
|
Preference number: 4 (lower is better) Translates to: NPSWTLRAIMHRGQERSLGYFGH*SGRSTI Trigger: AATTGTGCTCCTTCCGCTGCAGTGACCGAAGTAACC...GAGGCTCCTTTCCTGCCCTCTGTGCATAATTGCCCGTAATGTCCACGAAGGGTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046306.15 |
||
| CDS-3UTR GCA 90 bp | GGGCAATTATGCACAGAGGGCAGGAAAGGAGCCTCGGAGGCTCTGGAAGCATCTGTACCATTTTATGTTTaGGCCTTCGATGGTGGGACA | + |
|
Preference number: 4 (lower is better) Translates to: GQLCTEGRKGASEALEASVPFYV*AFDGGT Trigger: TGTCCCACCATCGAAGGCGCAAACATAAAATGGTAC...AGATGCTTCCAGAGCCTCCGAGGCTCCTTTCCTGCCCTCTGTGCATAATTGCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046306.15 |
||
| CDS-3UTR TCA 90 bp | AACCCTTCGTGGACATTACGGGCAATTATGCACAGAGGGCAGGAAAGGAGCCTCTGGGCAGAGGGTTGCTaGATCATGAAAGGCTTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: NPSWTLRAIMHRGQERSLWAEGC*IMKGFS Trigger: TGAAAAGCCTTTCATGATTCAGCAACCCTCTGCCCA...GAGGCTCCTTTCCTGCCCTCTGTGCATAATTGCCCGTAATGTCCACGAAGGGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046306.15 ENSMUST00000121033.8 |
||
| CDS-3UTR GCA 90 bp | AACCCTTCGTGGACATTACGGGCAATTATGCACAGAGGGCAGGAAAGGAGCCTCTCCCTGAAGAGTCTCTaGTTCTTTGTCCCCACTAAC | + |
|
Preference number: 4 (lower is better) Translates to: NPSWTLRAIMHRGQERSLSLKSL*FFVPTN Trigger: GTTAGTGGGGACAAAGAAGCAGAGACTCTTCAGGGA...GAGGCTCCTTTCCTGCCCTCTGTGCATAATTGCCCGTAATGTCCACGAAGGGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046306.15 ENSMUST00000121033.8 |
||
| CDS-3UTR CCA 90 bp | AGGCAAGGAGGCTCTGTCTGGGCATGCTCTGGGTTTGTAGCTGTTTCCTCACTTGTTTTGGTTTTCTGGTaGCAAGCTGGACAACTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: RQGGSVWACSGFVAVSSLVLVFW*QAGQLS Trigger: GGACAGTTGTCCAGCTTGCCACCAGAAAACCAAAAC...AAGTGAGGAAACAGCTACAAACCCAGAGCATGCCCAGACAGAGCCTCCTTGCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046306.15 ENSMUST00000121033.8 |
||
| CDS-3UTR CCA 90 bp | CTGTTTGGCCCAGAACGTAGAGGTGATAAAGCTGGCTGTGAGGAGAGCCCTTTCAGGGTTTTGGTTTTCTaGTGGCAAGCTGGACAACTG | + |
|
Preference number: 4 (lower is better) Translates to: LFGPERRGDKAGCEESPFRVLVF*WQAGQL Trigger: CAGTTGTCCAGCTTGCCACCAGAAAACCAAAACCCT...GAAAGGGCTCTCCTCACAGCCAGCTTTATCACCTCTACGTTCTGGGCCAAACAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046306.15 |
||
| CDS-3UTR TCA 90 bp | AGGCAAGGAGGCTCTGTCTGGGCATGCTCTGGGTTTGTAGCTGTTTCCTCACTTTGCCCTCTTGCAAAATaGCAGGCAAAATCGTACTTG | + |
|
Preference number: 4 (lower is better) Translates to: RQGGSVWACSGFVAVSSLCPLAK*QAKSYL Trigger: CAAGTACGATTTTGCCTGTCATTTTGCAAGAGGGCA...AAGTGAGGAAACAGCTACAAACCCAGAGCATGCCCAGACAGAGCCTCCTTGCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046306.15 ENSMUST00000121033.8 |
||
| CDS-3UTR GCA 90 bp | GGCATGCTCTGGGTTTGTAGCTGTTTCCTCACTTATTACGTCTCTGGGTTTCTATTCACTGCTGGGCCCTaGCACTGGACTGTAGTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: GMLWVCSCFLTYYVSGFLFTAGP*HWTVVP Trigger: AGGAACTACAGTCCAGTGGCAGGGCCCAGCAGTGAA...TAGAAACCCAGAGACGTAATAAGTGAGGAAACAGCTACAAACCCAGAGCATGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046306.15 ENSMUST00000121033.8 |
||
| CDS-3UTR GCA 90 bp | GGCATGCTCTGGGTTTGTAGCTGTTTCCTCACTTATTACGTCTCTGGGTTTCTAGGGTTGGAGCTGGAGTaGTTGGCTGGCTGTTTCCTA | + |
|
Preference number: 4 (lower is better) Translates to: GMLWVCSCFLTYYVSGFLGLELE*LAGCFL Trigger: TAGGAAACAGCCAGCCAAGCACTCCAGCTCCAACCC...TAGAAACCCAGAGACGTAATAAGTGAGGAAACAGCTACAAACCCAGAGCATGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046306.15 ENSMUST00000121033.8 |
||
| CDS-3UTR CCA 90 bp | TCAGGAGTACAGATAACCCTGGGAATCCTTATGGACAAGTGTAGGAAACTGATTGCGGTTCCGGACTTGTaGGGGAGGAGCTCTGAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: SGVQITLGILMDKCRKLIAVPDL*GRSSEE Trigger: TTCCTCAGAGCTCCTCCCCCACAAGTCCGGAACCGC...AATCAGTTTCCTACACTTGTCCATAAGGATTCCCAGGGTTATCTGTACTCCTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046306.15 ENSMUST00000121033.8 |
||
| CDS-3UTR CCA 90 bp | TCAGGAGTACAGATAACCCTGGGAATCCTTATGGACAAGTGTAGGAAACTGATTACTGGTGTGGGCACTTaGTTCACTGCTGGGCCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: SGVQITLGILMDKCRKLITGVGT*FTAGPC Trigger: GCAGGGCCCAGCAGTGAACCAAGTGCCCACACCAGT...AATCAGTTTCCTACACTTGTCCATAAGGATTCCCAGGGTTATCTGTACTCCTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046306.15 ENSMUST00000121033.8 |
||
| CDS-3UTR CCA 90 bp | CTGTTTGGCCCAGAACGTAGAGGTGATAAAGCTGGCTGTGAGGAGAGCCCTTTCATCATTAAGGTAGTCTaGTTTCTGGACCACCATGGA | + |
|
Preference number: 4 (lower is better) Translates to: LFGPERRGDKAGCEESPFIIKVV*FLDHHG Trigger: TCCATGGTGGTCCAGAAACCAGACTACCTTAATGAT...GAAAGGGCTCTCCTCACAGCCAGCTTTATCACCTCTACGTTCTGGGCCAAACAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046306.15 |
||
| CDS-3UTR TCA 90 bp | GGCATGCTCTGGGTTTGTAGCTGTTTCCTCACTTATTACGTCTCTGGGTTTCTAGAAATCATGTTCACATaGTGCGTCTGCTGGGTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: GMLWVCSCFLTYYVSGFLEIMFT*CVCWVR Trigger: CCTGACCCAGCAGACGCATCATGTGAACATGATTTC...TAGAAACCCAGAGACGTAATAAGTGAGGAAACAGCTACAAACCCAGAGCATGCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046306.15 ENSMUST00000121033.8 |
||
| CDS-3UTR GCA 90 bp | GGCATGCTCTGGGTTTGTAGCTGTTTCCTCACTTATTACGTCTCTGGGTTTCTAAAGTACACGTCACAGTaGTGGCAGTGGTGTAGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: GMLWVCSCFLTYYVSGFLKYTSQ*WQWCRS Trigger: GCTTCTACACCACTGCCAGCACTGTGACGTGTACTT...TAGAAACCCAGAGACGTAATAAGTGAGGAAACAGCTACAAACCCAGAGCATGCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046306.15 ENSMUST00000121033.8 |
||
| CDS-3UTR CCA 90 bp | CTGTTTGGCCCAGAACGTAGAGGTGATAAAGCTGGCTGTGAGGAGAGCCCTTTCTGGGTCAGGTATTCCTaGAAATCTTTTACAAAGTCC | + |
|
Preference number: 4 (lower is better) Translates to: LFGPERRGDKAGCEESPFWVRYS*KSFTKS Trigger: GGACTTTGTAAAAGATTTCCAGGAATACCTGACCCA...GAAAGGGCTCTCCTCACAGCCAGCTTTATCACCTCTACGTTCTGGGCCAAACAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046306.15 |
||
| CDS-3UTR CCA 90 bp | AACCCTTCGTGGACATTACGGGCAATTATGCACAGAGGGCAGGAAAGGAGCCTCTGGGTCAGGTATTCCTaGAAATCTTTTACAAAGTCC | + |
|
Preference number: 4 (lower is better) Translates to: NPSWTLRAIMHRGQERSLWVRYS*KSFTKS Trigger: GGACTTTGTAAAAGATTTCCAGGAATACCTGACCCA...GAGGCTCCTTTCCTGCCCTCTGTGCATAATTGCCCGTAATGTCCACGAAGGGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046306.15 ENSMUST00000121033.8 |
||
| CDS-3UTR CCA 90 bp | TCAGGAGTACAGATAACCCTGGGAATCCTTATGGACAAGTGTAGGAAACTGATTGCTGGAGTGCTTGGCTaGCTGTTTCCTATGCTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: SGVQITLGILMDKCRKLIAGVLG*LFPMLG Trigger: TCCCAGCATAGGAAACAGCCAGCCAAGCACTCCAGC...AATCAGTTTCCTACACTTGTCCATAAGGATTCCCAGGGTTATCTGTACTCCTGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046306.15 ENSMUST00000121033.8 |
||
| CDS-3UTR CCA 90 bp | AGAAAGAACATTAGCTGTAATGTATATCCTGAAGCATCAGGAGTACAGATAACCCTGCACCGGCAGGGTTaGAGCTGGAGTGCTTGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: RKNISCNVYPEASGVQITLHRQG*SWSAWL Trigger: CAGCCAAGCACTCCAGCTCCAACCCTGCCGGTGCAG...GGTTATCTGTACTCCTGATGCTTCAGGATATACATTACAGCTAATGTTCTTTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046306.15 ENSMUST00000121033.8 |
||
| CDS-3UTR TCA 90 bp | TATAGTAGTGAGCTCCTGAATCTGACAGCAGAAAGAGAAAGATTATGGAGACCATGCAGTACCGACACTTaGGCTTCCCATCGAAGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: YSSELLNLTAERERLWRPCSTDT*ASHRRS Trigger: GGACCTTCGATGGGAAGCTCAAGTGTCGGTACTGCA...TGGTCTCCATAATCTTTCTCTTTCTGCTGTCAGATTCAGGAGCTCACTACTATA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128432.3 |
||
| CDS-3UTR GCA 90 bp | GGCATGCTCTGGGTTTGTAGCTGTTTCCTCACTTATTACGTCTCTGGGTTTCTATCCCTGAAGAGTCTCTaGTTCTTTGTCCCCACTAAC | + |
|
Preference number: 4 (lower is better) Translates to: GMLWVCSCFLTYYVSGFLSLKSL*FFVPTN Trigger: GTTAGTGGGGACAAAGAAGCAGAGACTCTTCAGGGA...TAGAAACCCAGAGACGTAATAAGTGAGGAAACAGCTACAAACCCAGAGCATGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046306.15 ENSMUST00000121033.8 |
||
| CDS-3UTR GCA 90 bp | CTGTTTGGCCCAGAACGTAGAGGTGATAAAGCTGGCTGTGAGGAGAGCCCTTTCACTTGTCTTTACATTTaGACCCACATACGTTACACT | + |
|
Preference number: 4 (lower is better) Translates to: LFGPERRGDKAGCEESPFTCLYI*THIRYT Trigger: AGTGTAACGTATGTGGGTGCAAATGTAAAGACAAGT...GAAAGGGCTCTCCTCACAGCCAGCTTTATCACCTCTACGTTCTGGGCCAAACAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046306.15 |
||
| CDS-3UTR GCA 90 bp | AGGCAAGGAGGCTCTGTCTGGGCATGCTCTGGGTTTGTAGCTGTTTCCTCACTTACTTGTCTTTACATTTaGACCCACATACGTTACACT | + |
|
Preference number: 4 (lower is better) Translates to: RQGGSVWACSGFVAVSSLTCLYI*THIRYT Trigger: AGTGTAACGTATGTGGGTGCAAATGTAAAGACAAGT...AAGTGAGGAAACAGCTACAAACCCAGAGCATGCCCAGACAGAGCCTCCTTGCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046306.15 ENSMUST00000121033.8 |
||
| CDS-3UTR CCA 90 bp | GGCATGCTCTGGGTTTGTAGCTGTTTCCTCACTTATTACGTCTCTGGGTTTCTAGTTTTGGTTTTCTGGTaGCAAGCTGGACAACTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: GMLWVCSCFLTYYVSGFLVLVFW*QAGQLS Trigger: GGACAGTTGTCCAGCTTGCCACCAGAAAACCAAAAC...TAGAAACCCAGAGACGTAATAAGTGAGGAAACAGCTACAAACCCAGAGCATGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046306.15 ENSMUST00000121033.8 |
||
| CDS-3UTR CCA 90 bp | AGCTGTAATGTATATCCTGAAGCATCAGGAGTACAGATAACCCTGGGAATCCTTGGAGAGGCAGGGTTTTaGTTTTCTGGTGGCAAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: SCNVYPEASGVQITLGILGEAGF*FSGGKL Trigger: CAGCTTGCCACCAGAAAACCAAAACCCTGCCTCTCC...AAGGATTCCCAGGGTTATCTGTACTCCTGATGCTTCAGGATATACATTACAGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046306.15 ENSMUST00000121033.8 |
||
| CDS-3UTR CCA 90 bp | AGAAAGAACATTAGCTGTAATGTATATCCTGAAGCATCAGGAGTACAGATAACCCGGCAGGGTTGGAGCTaGAGTGCTTGGCTGGCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: RKNISCNVYPEASGVQITRQGWS*SAWLAV Trigger: AACAGCCAGCCAAGCACTCCAGCTCCAACCCTGCCG...GGTTATCTGTACTCCTGATGCTTCAGGATATACATTACAGCTAATGTTCTTTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046306.15 ENSMUST00000121033.8 |
||
| CDS-3UTR TCA 90 bp | GCCAGTGCACTCTACAGAAGCCTTTCTATTTTCTATAGTAGTGAGCTCCTGAATGAAATCATGTTCACATaGTGCGTCTGCTGGGTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: ASALYRSLSIFYSSELLNEIMFT*CVCWVR Trigger: CCTGACCCAGCAGACGCATCATGTGAACATGATTTC...ATTCAGGAGCTCACTACTATAGAAAATAGAAAGGCTTCTGTAGAGTGCACTGGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128432.3 |
||
| CDS-3UTR TCA 90 bp | GGCATGCTCTGGGTTTGTAGCTGTTTCCTCACTTATTACGTCTCTGGGTTTCTATTTGTCCCCACTAACTaGTCCCGAAATCATGTTCAC | + |
|
Preference number: 4 (lower is better) Translates to: GMLWVCSCFLTYYVSGFLFVPTN*SRNHVH Trigger: GTGAACATGATTTCGGGATCAGTTAGTGGGGACAAA...TAGAAACCCAGAGACGTAATAAGTGAGGAAACAGCTACAAACCCAGAGCATGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046306.15 ENSMUST00000121033.8 |
||
| CDS-3UTR TCA 90 bp | AGCTGTAATGTATATCCTGAAGCATCAGGAGTACAGATAACCCTGGGAATCCTTCTGAGGAATACTTGCTaGCACAGCAGAGACAACTGC | + |
|
Preference number: 4 (lower is better) Translates to: SCNVYPEASGVQITLGILLRNTC*HSRDNC Trigger: GCAGTTGTCTCTGCTGTGTCAGCAAGTATTCCTCAG...AAGGATTCCCAGGGTTATCTGTACTCCTGATGCTTCAGGATATACATTACAGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046306.15 ENSMUST00000121033.8 |
||
| CDS-3UTR GCA 90 bp | CGACCTGGGTTAGCCAGTGCACTCTACAGAAGCCTTTCTATTTTCTATAGTAGTTCCCTGAAGAGTCTCTaGTTCTTTGTCCCCACTAAC | + |
|
Preference number: 4 (lower is better) Translates to: RPGLASALYRSLSIFYSSSLKSL*FFVPTN Trigger: GTTAGTGGGGACAAAGAAGCAGAGACTCTTCAGGGA...ACTACTATAGAAAATAGAAAGGCTTCTGTAGAGTGCACTGGCTAACCCAGGTCG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000128432.3 |
||
| CDS-3UTR GCA 90 bp | AGGGATGATCAAACTAAAAACCAAACTACAAACTCCCAAAAGGCCAAACCAAGTGCTGGCTGTTTCCTATaGTGGGAGTACTGGTGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: RDDQTKNQTTNSQKAKPSAGCFL*WEYWCG Trigger: CCCACACCAGTACTCCCAGCATAGGAAACAGCCAGC...ACTTGGTTTGGCCTTTTGGGAGTTTGTAGTTTGGTTTTTAGTTTGATCATCCCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000046306.15 ENSMUST00000121033.8 |
||
| CDS-3UTR CCA 90 bp | TCAGGAGTACAGATAACCCTGGGAATCCTTATGGACAAGTGTAGGAAACTGATTTGGCAGGCCACCAGTTaGTGTAGTTTTAGCCATAGC | + |
|
Preference number: 4 (lower is better) Translates to: SGVQITLGILMDKCRKLIWQATS*CSFSHS Trigger: GCTATGGCTAAAACTACACCAACTGGTGGCCTGCCA...AATCAGTTTCCTACACTTGTCCATAAGGATTCCCAGGGTTATCTGTACTCCTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046306.15 |
||
| CDS-3UTR CCA 90 bp | TCAGGAGTACAGATAACCCTGGGAATCCTTATGGACAAGTGTAGGAAACTGATTTTTCTGGTGGCAAGCTaGACAACTGTCCTGCTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: SGVQITLGILMDKCRKLIFLVAS*TTVLLC Trigger: ACACAGCAGGACAGTTGTCCAGCTTGCCACCAGAAA...AATCAGTTTCCTACACTTGTCCATAAGGATTCCCAGGGTTATCTGTACTCCTGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000121033.8 |
||
| CDS-3UTR CCA 90 bp | AGAAAGAACATTAGCTGTAATGTATATCCTGAAGCATCAGGAGTACAGATAACCGGCTGTTTCCTATGCTaGGAGTACTGGTGTGGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: RKNISCNVYPEASGVQITGCFLC*EYWCGH Trigger: GTGCCCACACCAGTACTCCCAGCATAGGAAACAGCC...GGTTATCTGTACTCCTGATGCTTCAGGATATACATTACAGCTAATGTTCTTTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046306.15 ENSMUST00000121033.8 |
||
| CDS-3UTR GCA 90 bp | TCAGGAGTACAGATAACCCTGGGAATCCTTATGGACAAGTGTAGGAAACTGATTCCCACATTTTCTTGCTaGTTAAGGAAGACCTGGTAC | + |
|
Preference number: 4 (lower is better) Translates to: SGVQITLGILMDKCRKLIPTFSC*LRKTWY Trigger: GTACCAGGTCTTCCTTAAGCAGCAAGAAAATGTGGG...AATCAGTTTCCTACACTTGTCCATAAGGATTCCCAGGGTTATCTGTACTCCTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046306.15 |
||
| CDS-3UTR CCA 90 bp | AGAAAGAACATTAGCTGTAATGTATATCCTGAAGCATCAGGAGTACAGATAACCGGAGAGGCAGGGTTTTaGTTTTCTGGTGGCAAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: RKNISCNVYPEASGVQITGEAGF*FSGGKL Trigger: CAGCTTGCCACCAGAAAACCAAAACCCTGCCTCTCC...GGTTATCTGTACTCCTGATGCTTCAGGATATACATTACAGCTAATGTTCTTTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046306.15 ENSMUST00000121033.8 |
||
| CDS-3UTR TCA 90 bp | AGGGATGATCAAACTAAAAACCAAACTACAAACTCCCAAAAGGCCAAACCAAGTTGGGCAGAGGGTTGCTaGATCATGAAAGGCTTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: RDDQTKNQTTNSQKAKPSWAEGC*IMKGFS Trigger: TGAAAAGCCTTTCATGATTCAGCAACCCTCTGCCCA...ACTTGGTTTGGCCTTTTGGGAGTTTGTAGTTTGGTTTTTAGTTTGATCATCCCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000046306.15 ENSMUST00000121033.8 |
||
| CDS-3UTR GCA 90 bp | AGAAAGAACATTAGCTGTAATGTATATCCTGAAGCATCAGGAGTACAGATAACCAAGTACACGTCACAGTaGTGGCAGTGGTGTAGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: RKNISCNVYPEASGVQITKYTSQ*WQWCRS Trigger: GCTTCTACACCACTGCCAGCACTGTGACGTGTACTT...GGTTATCTGTACTCCTGATGCTTCAGGATATACATTACAGCTAATGTTCTTTCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046306.15 ENSMUST00000121033.8 |
||
| CDS-3UTR CCA 90 bp | GAGCTCCTGAATCTGACAGCAGAAAGAGAAAGATTATGGAGACCAAGCAGGAAATGGGTCAGGTATTCCTaGAAATCTTTTACAAAGTCC | + |
|
Preference number: 4 (lower is better) Translates to: ELLNLTAERERLWRPSRKWVRYS*KSFTKS Trigger: GGACTTTGTAAAAGATTTCCAGGAATACCTGACCCA...TTTCCTGCTTGGTCTCCATAATCTTTCTCTTTCTGCTGTCAGATTCAGGAGCTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128432.3 |
||
| CDS-3UTR TCA 90 bp | AGAAAGAACATTAGCTGTAATGTATATCCTGAAGCATCAGGAGTACAGATAACCAGGGTTGCTGAATCATaGAAGGCTTTTCATCAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: RKNISCNVYPEASGVQITRVAES*KAFHQG Trigger: GCCCTGATGAAAAGCCTTTCATGATTCAGCAACCCT...GGTTATCTGTACTCCTGATGCTTCAGGATATACATTACAGCTAATGTTCTTTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046306.15 ENSMUST00000121033.8 |
||
| CDS-3UTR CCA 90 bp | TCAGGAGTACAGATAACCCTGGGAATCCTTATGGACAAGTGTAGGAAACTGATTCCTGGTACCTTTAATTaGTACCATTTTATGTTTGCG | + |
|
Preference number: 4 (lower is better) Translates to: SGVQITLGILMDKCRKLIPGTFN*YHFMFA Trigger: CGCAAACATAAAATGGTACCAATTAAAGGTACCAGG...AATCAGTTTCCTACACTTGTCCATAAGGATTCCCAGGGTTATCTGTACTCCTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046306.15 |
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| CDS GCA 90 bp | GCACCGGCAGGGTTGGAGCTGGAGTGCTTGGCTGGCTGTTTCCTATaGTGGGAGTACTGGTGTGGGCACTTGGTTCACTGCTGGGCCCTG | + |
|
Preference number: 5 (lower is better) Translates to: APAGLELECLAGCFL*WEYWCGHLVHCWAL Trigger: CAGGGCCCAGCAGTGAACCAAGTGCCCACACCAGTACTCCCAGCATAGGAAACAGCCAGCCAAGCACTCCAGCTCCAACCCTGCCGGTGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046306.15 ENSMUST00000121033.8 |
||
| CDS CCA 90 bp | CCGGCAGGGTTGGAGCTGGAGTGCTTGGCTGGCTGTTTCCTATGCTaGGAGTACTGGTGTGGGCACTTGGTTCACTGCTGGGCCCTGCCA | + |
|
Preference number: 5 (lower is better) Translates to: PAGLELECLAGCFLC*EYWCGHLVHCWALP Trigger: TGGCAGGGCCCAGCAGTGAACCAAGTGCCCACACCAGTACTCCCAGCATAGGAAACAGCCAGCCAAGCACTCCAGCTCCAACCCTGCCGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046306.15 ENSMUST00000121033.8 |
||
| CDS-3UTR CAA 90 bp | GGAAAGGAGCCTCGGAGGCTCTGGAAGCATCTCAGTGGGATGATGCGCTCACTTGCCGCGGTTCCGGACTaGTGGGGGAGGAGCTCTGAG | + |
|
Preference number: 5 (lower is better) Translates to: GKEPRRLWKHLSGMMRSLAAVPD*WGRSSE Trigger: CTCAGAGCTCCTCCCCCACAAGTCCGGAACCGCGGC...AAGTGAGCGCATCATCCCACTGAGATGCTTCCAGAGCCTCCGAGGCTCCTTTCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000046306.15 ENSMUST00000121033.8 |
||
| CDS CCA 90 bp | GGGAGTACTGGTGTGGGCACTTGGTTCACTGCTGGGCCCTGCCACTaGACTGTAGTTCCTCTGACTATGCGATGGCCGCGGTTCCGGACT | + |
|
Preference number: 5 (lower is better) Translates to: GSTGVGTWFTAGPCH*TVVPLTMRWPRFRT Trigger: AGTCCGGAACCGCGGCCATCGCATAGTCAGAGGAACTACAGTCCAGTGGCAGGGCCCAGCAGTGAACCAAGTGCCCACACCAGTACTCCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046306.15 ENSMUST00000121033.8 |
||
| CDS-3UTR CAA 90 bp | AGTTGGGAGGAGCCAAGACTGGCTGTGTACGCACAGGCACCCTCGGAATGGCTTGTCAACCATGAGTTCTaGGGGGTCCCTTGGCAGGCC | + |
|
Preference number: 5 (lower is better) Translates to: SWEEPRLAVYAQAPSEWLVNHEF*GVPWQA Trigger: GGCCTGCCAAGGGACCCCCAAGAACTCATGGTTGAC...AAGCCATTCCGAGGGTGCCTGTGCGTACACAGCCAGTCTTGGCTCCTCCCAACT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000046306.15 |
||
| CDS-3UTR CAA 90 bp | AACCCTTCGTGGACATTACGGGCAATTATGCACAGAGGGCAGGAAAGGAGCCTCGCCGCGGTTCCGGACTaGTGGGGGAGGAGCTCTGAG | + |
|
Preference number: 5 (lower is better) Translates to: NPSWTLRAIMHRGQERSLAAVPD*WGRSSE Trigger: CTCAGAGCTCCTCCCCCACAAGTCCGGAACCGCGGC...GAGGCTCCTTTCCTGCCCTCTGTGCATAATTGCCCGTAATGTCCACGAAGGGTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000046306.15 ENSMUST00000121033.8 |
||
| CDS GCA 90 bp | TATGCTGGGAGTACTGGTGTGGGCACTTGGTTCACTGCTGGGCCCTaGCACTGGACTGTAGTTCCTCTGACTATGCGATGGCCGCGGTTC | + |
|
Preference number: 5 (lower is better) Translates to: YAGSTGVGTWFTAGP*HWTVVPLTMRWPRF Trigger: GAACCGCGGCCATCGCATAGTCAGAGGAACTACAGTCCAGTGGCAGGGCCCAGCAGTGAACCAAGTGCCCACACCAGTACTCCCAGCATA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046306.15 ENSMUST00000121033.8 |
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| CDS TCA 90 bp | TTGTCTGCAAAGTACACGTCACAGTGCTGGCAGTGGTGTAGAAGCTaGGGATCCTGCACCGGCAGGGTTGGAGCTGGAGTGCTTGGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: LSAKYTSQCWQWCRS*GSCTGRVGAGVLGW Trigger: CCAGCCAAGCACTCCAGCTCCAACCCTGCCGGTGCAGGATCCTCAGCTTCTACACCACTGCCAGCACTGTGACGTGTACTTTGCAGACAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046306.15 ENSMUST00000121033.8 |
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| CDS TCA 90 bp | CCGCGGTTCCGGACTTGTGGGGGAGGAGCTCTGAGGAATACTTGCTaGCACAGCAGAGACAACTGCTTGGGCAGAGGGTTGCTGAATCAT | + |
|
Preference number: 5 (lower is better) Translates to: PRFRTCGGGALRNTC*HSRDNCLGRGLLNH Trigger: ATGATTCAGCAACCCTCTGCCCAAGCAGTTGTCTCTGCTGTGTCAGCAAGTATTCCTCAGAGCTCCTCCCCCACAAGTCCGGAACCGCGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000046306.15 ENSMUST00000121033.8 |
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| CDS CCA 90 bp | TGTTTCCTATGCTGGGAGTACTGGTGTGGGCACTTGGTTCACTGCTaGGCCCTGCCACTGGACTGTAGTTCCTCTGACTATGCGATGGCC | + |
|
Preference number: 5 (lower is better) Translates to: CFLCWEYWCGHLVHC*ALPLDCSSSDYAMA Trigger: GGCCATCGCATAGTCAGAGGAACTACAGTCCAGTGGCAGGGCCCAGCAGTGAACCAAGTGCCCACACCAGTACTCCCAGCATAGGAAACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046306.15 ENSMUST00000121033.8 |
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| CDS-3UTR CAA 90 bp | CACAGACTGTGCCTGGGCTTGGGTGAGGGCAAGGCGTGCTTTGGAAGGTTTCTCTTGCAGTACCGACACTaGAGCTTCCCATCGAAGGTC | + |
|
Preference number: 5 (lower is better) Translates to: HRLCLGLGEGKACFGRFLLQYRH*SFPSKV Trigger: GACCTTCGATGGGAAGCTCAAGTGTCGGTACTGCAA...GAGAAACCTTCCAAAGCACGCCTTGCCCTCACCCAAGCCCAGGCACAGTCTGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128432.3 |
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| CDS-3UTR CAA 90 bp | GGGAGGAGCCAAGACTGGCTGTGTACGCACAGGCACCCTCGGAATGGCTTTCCATGCTTGGGCAGAGGGTaGCTGAATCATGAAAGGCTT | + |
|
Preference number: 5 (lower is better) Translates to: GRSQDWLCTHRHPRNGFPCLGRG*LNHERL Trigger: AAGCCTTTCATGATTCAGCAACCCTCTGCCCAAGCA...TGGAAAGCCATTCCGAGGGTGCCTGTGCGTACACAGCCAGTCTTGGCTCCTCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046306.15 |
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| CDS CCA 90 bp | GACTGTAGTTCCTCTGACTATGCGATGGCCGCGGTTCCGGACTTGTaGGGGAGGAGCTCTGAGGAATACTTGCTGACACAGCAGAGACAA | + |
|
Preference number: 5 (lower is better) Translates to: DCSSSDYAMAAVPDL*GRSSEEYLLTQQRQ Trigger: TTGTCTCTGCTGTGTCAGCAAGTATTCCTCAGAGCTCCTCCCCCACAAGTCCGGAACCGCGGCCATCGCATAGTCAGAGGAACTACAGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046306.15 ENSMUST00000121033.8 |
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| CDS-3UTR CAA 90 bp | GGAAAGGAGCCTCGGAGGCTCTGGAAGCATCTCAGTGGGATGATGCGCTCACTTAGGAGAGGCAGGGTTTaGGTTTTCTGGTGGCAAGCT | + |
|
Preference number: 5 (lower is better) Translates to: GKEPRRLWKHLSGMMRSLRRGRV*VFWWQA Trigger: AGCTTGCCACCAGAAAACCAAAACCCTGCCTCTCCT...AAGTGAGCGCATCATCCCACTGAGATGCTTCCAGAGCCTCCGAGGCTCCTTTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046306.15 ENSMUST00000121033.8 |
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| CDS-3UTR CAA 90 bp | TGGGCATGCTCTGGGTTTGTAGCTGTTTCCTCACTTATTACGTCTCTGGGTTTCGTTCTTGGGGGTCCCTaGGCAGGCCACCAGTTGGTG | + |
|
Preference number: 5 (lower is better) Translates to: WACSGFVAVSSLITSLGFVLGGP*AGHQLV Trigger: CACCAACTGGTGGCCTGCCAAGGGACCCCCAAGAAC...GAAACCCAGAGACGTAATAAGTGAGGAAACAGCTACAAACCCAGAGCATGCCCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000046306.15 |
||
| CDS-3UTR CAA 90 bp | AACCCTTCGTGGACATTACGGGCAATTATGCACAGAGGGCAGGAAAGGAGCCTCTTGGAGCTGGAGTGCTaGGCTGGCTGTTTCCTATGC | + |
|
Preference number: 5 (lower is better) Translates to: NPSWTLRAIMHRGQERSLLELEC*AGCFLC Trigger: GCATAGGAAACAGCCAGCCAAGCACTCCAGCTCCAA...GAGGCTCCTTTCCTGCCCTCTGTGCATAATTGCCCGTAATGTCCACGAAGGGTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046306.15 ENSMUST00000121033.8 |
||
| CDS-3UTR CAA 90 bp | AGTTGGGAGGAGCCAAGACTGGCTGTGTACGCACAGGCACCCTCGGAATGGCTTTCAGTGCTGGTTGTGTaGCCCTCTTGCAAAATGACA | + |
|
Preference number: 5 (lower is better) Translates to: SWEEPRLAVYAQAPSEWLSVLVV*PSCKMT Trigger: TGTCATTTTGCAAGAGGGCAACACAACCAGCACTGA...AAGCCATTCCGAGGGTGCCTGTGCGTACACAGCCAGTCTTGGCTCCTCCCAACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046306.15 |
||
| CDS GCA 90 bp | AGAGGCAGGGTTTTGGTTTTCTGGTGGCAAGCTGGACAACTGTCCTaGTGTGTGGATCCTGATGTGCTCAATGAGCCTGGCCGTTCCTTT | + |
|
Preference number: 5 (lower is better) Translates to: RGRVLVFWWQAGQLS*CVDPDVLNEPGRSF Trigger: AAAGGAACGGCCAGGCTCATTGAGCACATCAGGATCCACACAGCAGGACAGTTGTCCAGCTTGCCACCAGAAAACCAAAACCCTGCCTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000121033.8 |
||
| CDS-3UTR CAA 90 bp | AGGCAAGGAGGCTCTGTCTGGGCATGCTCTGGGTTTGTAGCTGTTTCCTCACTTTTGCAGTACCGACACTaGAGCTTCCCATCGAAGGTC | + |
|
Preference number: 5 (lower is better) Translates to: RQGGSVWACSGFVAVSSLLQYRH*SFPSKV Trigger: GACCTTCGATGGGAAGCTCAAGTGTCGGTACTGCAA...AAGTGAGGAAACAGCTACAAACCCAGAGCATGCCCAGACAGAGCCTCCTTGCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046306.15 ENSMUST00000121033.8 |
||
| CDS-3UTR CAA 90 bp | GGGCAATTATGCACAGAGGGCAGGAAAGGAGCCTCGGAGGCTCTGGAAGCATCTAGCTCTGAGGAATACTaGCTGACACAGCAGAGACAA | + |
|
Preference number: 5 (lower is better) Translates to: GQLCTEGRKGASEALEASSSEEY*LTQQRQ Trigger: TTGTCTCTGCTGTGTCAGCAAGTATTCCTCAGAGCT...AGATGCTTCCAGAGCCTCCGAGGCTCCTTTCCTGCCCTCTGTGCATAATTGCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046306.15 ENSMUST00000121033.8 |
||
| CDS TCA 90 bp | CTGACACAGCAGAGACAACTGCTTGGGCAGAGGGTTGCTGAATCATaGAAGGCTTTTCATCAGGGCAGGCATCTACATCAGGAGAGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: LTQQRQLLGQRVAES*KAFHQGRHLHQERQ Trigger: CTGCCTCTCCTGATGTAGATGCCTGCCCTGATGAAAAGCCTTTCATGATTCAGCAACCCTCTGCCCAAGCAGTTGTCTCTGCTGTGTCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046306.15 ENSMUST00000121033.8 |
||
| CDS-3UTR CAA 90 bp | GGGCAATTATGCACAGAGGGCAGGAAAGGAGCCTCGGAGGCTCTGGAAGCATCTCAGGCAAAATCGTACTaGTCTTTACATTTGCACCCA | + |
|
Preference number: 5 (lower is better) Translates to: GQLCTEGRKGASEALEASQAKSY*SLHLHP Trigger: TGGGTGCAAATGTAAAGACAAGTACGATTTTGCCTG...AGATGCTTCCAGAGCCTCCGAGGCTCCTTTCCTGCCCTCTGTGCATAATTGCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046306.15 ENSMUST00000121033.8 |
||
| CDS-3UTR CAA 90 bp | AGGCAAGGAGGCTCTGTCTGGGCATGCTCTGGGTTTGTAGCTGTTTCCTCACTTTCAGTGCTGGTTGTGTaGCCCTCTTGCAAAATGACA | + |
|
Preference number: 5 (lower is better) Translates to: RQGGSVWACSGFVAVSSLSVLVV*PSCKMT Trigger: TGTCATTTTGCAAGAGGGCAACACAACCAGCACTGA...AAGTGAGGAAACAGCTACAAACCCAGAGCATGCCCAGACAGAGCCTCCTTGCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046306.15 ENSMUST00000121033.8 |
||
| CDS TCA 90 bp | TGTTCCAGCTCCCTGAAGAGTCTCTGCTTCTTTGTCCCCACTAACTaGTCCCGAAATCATGTTCACATGATGCGTCTGCTGGGTCAGGTA | + |
|
Preference number: 5 (lower is better) Translates to: CSSSLKSLCFFVPTN*SRNHVHMMRLLGQV Trigger: TACCTGACCCAGCAGACGCATCATGTGAACATGATTTCGGGATCAGTTAGTGGGGACAAAGAAGCAGAGACTCTTCAGGGAGCTGGAACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000046306.15 ENSMUST00000121033.8 ENSMUST00000128432.3 ENSMUST00000154602.8 ENSMUST00000207243.2 |
||
| CDS TCA 90 bp | TTTTCTGGTGGCAAGCTGGACAACTGTCCTGCTAAAGTAGAGAGCTaGTTCAAAGGGTTGTCAACCATGAGTTCTTGGGGGTCCCTTGGC | + |
|
Preference number: 5 (lower is better) Translates to: FSGGKLDNCPAKVES*FKGLSTMSSWGSLG Trigger: GCCAAGGGACCCCCAAGAACTCATGGTTGACAACCCTTTGAATCAGCTCTCTACTTTAGCAGGACAGTTGTCCAGCTTGCCACCAGAAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000046306.15 |
||
| CDS CCA 90 bp | GAGCTGATTCAAAGGGTTGTCAACCATGAGTTCTTGGGGGTCCCTTaGCAGGCCACCAGTTGGTGTAGTTTTAGCCATAGCTTCATAGGA | + |
|
Preference number: 5 (lower is better) Translates to: ELIQRVVNHEFLGVP*QATSWCSFSHSFIG Trigger: TCCTATGAAGCTATGGCTAAAACTACACCAACTGGTGGCCTGCCAAGGGACCCCCAAGAACTCATGGTTGACAACCCTTTGAATCAGCTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000046306.15 |
||
| CDS-3UTR CAA 90 bp | TGGGCATGCTCTGGGTTTGTAGCTGTTTCCTCACTTATTACGTCTCTGGGTTTCAGGAGAGGCAGGGTTTaGGTTTTCTGGTGGCAAGCT | + |
|
Preference number: 5 (lower is better) Translates to: WACSGFVAVSSLITSLGFRRGRV*VFWWQA Trigger: AGCTTGCCACCAGAAAACCAAAACCCTGCCTCTCCT...GAAACCCAGAGACGTAATAAGTGAGGAAACAGCTACAAACCCAGAGCATGCCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046306.15 ENSMUST00000121033.8 |
||
| CDS TCA 90 bp | ATACTTGCTGACACAGCAGAGACAACTGCTTGGGCAGAGGGTTGCTaGATCATGAAAGGCTTTTCATCAGGGCAGGCATCTACATCAGGA | + |
|
Preference number: 5 (lower is better) Translates to: ILADTAETTAWAEGC*IMKGFSSGQASTSG Trigger: TCCTGATGTAGATGCCTGCCCTGATGAAAAGCCTTTCATGATTCAGCAACCCTCTGCCCAAGCAGTTGTCTCTGCTGTGTCAGCAAGTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046306.15 ENSMUST00000121033.8 |
||
| CDS CCA 90 bp | GACCTGGTACCTTTAATTGGTACCATTTTATGTTTGCGCCTTCGATaGTGGGACAGGTTACTTCGGTCACTGCAGCGGAAGGAGCACAAT | + |
|
Preference number: 5 (lower is better) Translates to: DLVPLIGTILCLRLR*WDRLLRSLQRKEHN Trigger: ATTGTGCTCCTTCCGCTGCAGTGACCGAAGTAACCTGTCCCACCATCGAAGGCGCAAACATAAAATGGTACCAATTAAAGGTACCAGGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046306.15 |
||
| CDS-3UTR CAA 90 bp | AGGCAAGGAGGCTCTGTCTGGGCATGCTCTGGGTTTGTAGCTGTTTCCTCACTTGAAGGTGGACTTAAGTaGATTAGTGCTCTTCTGCTA | + |
|
Preference number: 5 (lower is better) Translates to: RQGGSVWACSGFVAVSSLEGGLK*ISALLL Trigger: TAGCAGAAGAGCACTAATCAACTTAAGTCCACCTTC...AAGTGAGGAAACAGCTACAAACCCAGAGCATGCCCAGACAGAGCCTCCTTGCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046306.15 |
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| CDS CCA 90 bp | CTGGTACCTTTAATTGGTACCATTTTATGTTTGCGCCTTCGATGGTaGGACAGGTTACTTCGGTCACTGCAGCGGAAGGAGCACAATTCA | + |
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Preference number: 5 (lower is better) Translates to: LVPLIGTILCLRLRW*DRLLRSLQRKEHNS Trigger: TGAATTGTGCTCCTTCCGCTGCAGTGACCGAAGTAACCTGTCCCACCATCGAAGGCGCAAACATAAAATGGTACCAATTAAAGGTACCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046306.15 |
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| CDS CCA 90 bp | GTTGTCAACCATGAGTTCTTGGGGGTCCCTTGGCAGGCCACCAGTTaGTGTAGTTTTAGCCATAGCTTCATAGGAGTCAGTCTGAATATT | + |
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Preference number: 5 (lower is better) Translates to: VVNHEFLGVPWQATS*CSFSHSFIGVSLNI Trigger: AATATTCAGACTGACTCCTATGAAGCTATGGCTAAAACTACACCAACTGGTGGCCTGCCAAGGGACCCCCAAGAACTCATGGTTGACAAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000046306.15 |
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| CDS-3UTR CAA 90 bp | TCAGGAGTACAGATAACCCTGGGAATCCTTATGGACAAGTGTAGGAAACTGATTTTGCAGTACCGACACTaGAGCTTCCCATCGAAGGTC | + |
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Preference number: 5 (lower is better) Translates to: SGVQITLGILMDKCRKLILQYRH*SFPSKV Trigger: GACCTTCGATGGGAAGCTCAAGTGTCGGTACTGCAA...AATCAGTTTCCTACACTTGTCCATAAGGATTCCCAGGGTTATCTGTACTCCTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046306.15 ENSMUST00000121033.8 |
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| CDS-3UTR CAA 90 bp | GGCATGCTCTGGGTTTGTAGCTGTTTCCTCACTTATTACGTCTCTGGGTTTCTAAGCTCTGAGGAATACTaGCTGACACAGCAGAGACAA | + |
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Preference number: 5 (lower is better) Translates to: GMLWVCSCFLTYYVSGFLSSEEY*LTQQRQ Trigger: TTGTCTCTGCTGTGTCAGCAAGTATTCCTCAGAGCT...TAGAAACCCAGAGACGTAATAAGTGAGGAAACAGCTACAAACCCAGAGCATGCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046306.15 ENSMUST00000121033.8 |
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| CDS CCA 90 bp | CTTTGCAGAAATGCATACTTGTATACTAGGTTTGTAAGATCTGTGTaGATCCTGATGTGCTCAATGAGCCTGGCCGTTCCTTTGCTGGCA | + |
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Preference number: 5 (lower is better) Translates to: LCRNAYLYTRFVRSV*ILMCSMSLAVPLLA Trigger: TGCCAGCAAAGGAACGGCCAGGCTCATTGAGCACATCAGGATCCACACAGATCTTACAAACCTAGTATACAAGTATGCATTTCTGCAAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207243.2 |
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| CDS-3UTR CAA 90 bp | TCAGGAGTACAGATAACCCTGGGAATCCTTATGGACAAGTGTAGGAAACTGATTTGCTTGGGCAGAGGGTaGCTGAATCATGAAAGGCTT | + |
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Preference number: 5 (lower is better) Translates to: SGVQITLGILMDKCRKLICLGRG*LNHERL Trigger: AAGCCTTTCATGATTCAGCAACCCTCTGCCCAAGCA...AATCAGTTTCCTACACTTGTCCATAAGGATTCCCAGGGTTATCTGTACTCCTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046306.15 ENSMUST00000121033.8 |
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| CDS-3UTR CAA 90 bp | AGGGATGATCAAACTAAAAACCAAACTACAAACTCCCAAAAGGCCAAACCAAGTTTGGAGCTGGAGTGCTaGGCTGGCTGTTTCCTATGC | + |
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Preference number: 5 (lower is better) Translates to: RDDQTKNQTTNSQKAKPSLELEC*AGCFLC Trigger: GCATAGGAAACAGCCAGCCAAGCACTCCAGCTCCAA...ACTTGGTTTGGCCTTTTGGGAGTTTGTAGTTTGGTTTTTAGTTTGATCATCCCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000046306.15 ENSMUST00000121033.8 |
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| CDS TCA 90 bp | TCTGCTTCTTTGTCCCCACTAACTGATCCCGAAATCATGTTCACATaGTGCGTCTGCTGGGTCAGGTATTCCTGGAAATCTTTTACAAAG | + |
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Preference number: 5 (lower is better) Translates to: SASLSPLTDPEIMFT*CVCWVRYSWKSFTK Trigger: CTTTGTAAAAGATTTCCAGGAATACCTGACCCAGCAGACGCATCATGTGAACATGATTTCGGGATCAGTTAGTGGGGACAAAGAAGCAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000046306.15 ENSMUST00000121033.8 ENSMUST00000128432.3 ENSMUST00000154602.8 ENSMUST00000207243.2 |
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| CDS-3UTR CAA 90 bp | AGGGATGATCAAACTAAAAACCAAACTACAAACTCCCAAAAGGCCAAACCAAGTGGTACCATTTTATGTTaGCGCCTTCGATGGTGGGAC | + |
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Preference number: 5 (lower is better) Translates to: RDDQTKNQTTNSQKAKPSGTILC*RLRWWD Trigger: GTCCCACCATCGAAGGCGCAAACATAAAATGGTACC...ACTTGGTTTGGCCTTTTGGGAGTTTGTAGTTTGGTTTTTAGTTTGATCATCCCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000046306.15 |
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| CDS-3UTR CAA 90 bp | AGCTGTAATGTATATCCTGAAGCATCAGGAGTACAGATAACCCTGGGAATCCTTCAGGCAAAATCGTACTaGTCTTTACATTTGCACCCA | + |
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Preference number: 5 (lower is better) Translates to: SCNVYPEASGVQITLGILQAKSY*SLHLHP Trigger: TGGGTGCAAATGTAAAGACAAGTACGATTTTGCCTG...AAGGATTCCCAGGGTTATCTGTACTCCTGATGCTTCAGGATATACATTACAGCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046306.15 ENSMUST00000121033.8 |
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| CDS CCA 90 bp | TGGTGTAGTTTTAGCCATAGCTTCATAGGAGTCAGTCTGAATATTTaGGATTTCGTGTGTAAAATCATTAAGGTAGTCTGGTTTCTGGAC | + |
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Preference number: 5 (lower is better) Translates to: WCSFSHSFIGVSLNI*DFVCKIIKVVWFLD Trigger: GTCCAGAAACCAGACTACCTTAATGATTTTACACACGAAATCCCAAATATTCAGACTGACTCCTATGAAGCTATGGCTAAAACTACACCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046306.15 |
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| CDS CCA 72 bp | CCCTGCCACTGGACTGTAGTTCCTCTGACTATGCGATaGCCGCGGTTCCGGACTTGTGGGGGAGGAGCTCTG | + |
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Preference number: 6 (lower is better) Translates to: PCHWTVVPLTMR*PRFRTCGGGAL Trigger: CAGAGCTCCTCCCCCACAAGTCCGGAACCGCGGCCATCGCATAGTCAGAGGAACTACAGTCCAGTGGCAGGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000046306.15 ENSMUST00000121033.8 |
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| CDS CCA 72 bp | TCCTGCACCGGCAGGGTTGGAGCTGGAGTGCTTGGCTaGCTGTTTCCTATGCTGGGAGTACTGGTGTGGGCA | + |
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Preference number: 6 (lower is better) Translates to: SCTGRVGAGVLG*LFPMLGVLVWA Trigger: TGCCCACACCAGTACTCCCAGCATAGGAAACAGCCAGCCAAGCACTCCAGCTCCAACCCTGCCGGTGCAGGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046306.15 ENSMUST00000121033.8 |
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| CDS TCA 72 bp | GATGGCCGCGGTTCCGGACTTGTGGGGGAGGAGCTCTaGGGAATACTTGCTGACACAGCAGAGACAACTGCT | + |
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Preference number: 6 (lower is better) Translates to: DGRGSGLVGEEL*GILADTAETTA Trigger: AGCAGTTGTCTCTGCTGTGTCAGCAAGTATTCCTCAGAGCTCCTCCCCCACAAGTCCGGAACCGCGGCCATC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000046306.15 ENSMUST00000121033.8 |
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| CDS GCA 72 bp | GGGTTGGAGCTGGAGTGCTTGGCTGGCTGTTTCCTATaGTGGGAGTACTGGTGTGGGCACTTGGTTCACTGC | + |
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Preference number: 6 (lower is better) Translates to: GLELECLAGCFL*WEYWCGHLVHC Trigger: GCAGTGAACCAAGTGCCCACACCAGTACTCCCAGCATAGGAAACAGCCAGCCAAGCACTCCAGCTCCAACCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046306.15 ENSMUST00000121033.8 |
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| CDS CCA 72 bp | TCCTCTGACTATGCGATGGCCGCGGTTCCGGACTTGTaGGGGAGGAGCTCTGAGGAATACTTGCTGACACAG | + |
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Preference number: 6 (lower is better) Translates to: SSDYAMAAVPDL*GRSSEEYLLTQ Trigger: CTGTGTCAGCAAGTATTCCTCAGAGCTCCTCCCCCACAAGTCCGGAACCGCGGCCATCGCATAGTCAGAGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046306.15 ENSMUST00000121033.8 |
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| CDS CAA 90 bp | CTGGACTGTAGTTCCTCTGACTATGCGATGGCCGCGGTTCCGGACTaGTGGGGGAGGAGCTCTGAGGAATACTTGCTGACACAGCAGAGA | + |
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Preference number: 6 (lower is better) Translates to: LDCSSSDYAMAAVPD*WGRSSEEYLLTQQR Trigger: TCTCTGCTGTGTCAGCAAGTATTCCTCAGAGCTCCTCCCCCACAAGTCCGGAACCGCGGCCATCGCATAGTCAGAGGAACTACAGTCCAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000046306.15 ENSMUST00000121033.8 |
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| CDS CCA 72 bp | TGCTGGGAGTACTGGTGTGGGCACTTGGTTCACTGCTaGGCCCTGCCACTGGACTGTAGTTCCTCTGACTAT | + |
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Preference number: 6 (lower is better) Translates to: CWEYWCGHLVHC*ALPLDCSSSDY Trigger: ATAGTCAGAGGAACTACAGTCCAGTGGCAGGGCCCAGCAGTGAACCAAGTGCCCACACCAGTACTCCCAGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046306.15 ENSMUST00000121033.8 |
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| CDS CCA 72 bp | TTGGAGCTGGAGTGCTTGGCTGGCTGTTTCCTATGCTaGGAGTACTGGTGTGGGCACTTGGTTCACTGCTGG | + |
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Preference number: 6 (lower is better) Translates to: LELECLAGCFLC*EYWCGHLVHCW Trigger: CCAGCAGTGAACCAAGTGCCCACACCAGTACTCCCAGCATAGGAAACAGCCAGCCAAGCACTCCAGCTCCAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046306.15 ENSMUST00000121033.8 |
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| CDS CAA 72 bp | GTTCCGGACTTGTGGGGGAGGAGCTCTGAGGAATACTaGCTGACACAGCAGAGACAACTGCTTGGGCAGAGG | + |
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Preference number: 6 (lower is better) Translates to: VPDLWGRSSEEY*LTQQRQLLGQR Trigger: CCTCTGCCCAAGCAGTTGTCTCTGCTGTGTCAGCAAGTATTCCTCAGAGCTCCTCCCCCACAAGTCCGGAAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000046306.15 ENSMUST00000121033.8 |
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| CDS CAA 72 bp | AGTTCCTCTGACTATGCGATGGCCGCGGTTCCGGACTaGTGGGGGAGGAGCTCTGAGGAATACTTGCTGACA | + |
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Preference number: 6 (lower is better) Translates to: SSSDYAMAAVPD*WGRSSEEYLLT Trigger: TGTCAGCAAGTATTCCTCAGAGCTCCTCCCCCACAAGTCCGGAACCGCGGCCATCGCATAGTCAGAGGAACT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000046306.15 ENSMUST00000121033.8 |
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| CDS CCA 72 bp | TCAGGGCAGGCATCTACATCAGGAGAGGCAGGGTTTTaGTTTTCTGGTGGCAAGCTGGACAACTGTCCTGCT | + |
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Preference number: 6 (lower is better) Translates to: SGQASTSGEAGF*FSGGKLDNCPA Trigger: AGCAGGACAGTTGTCCAGCTTGCCACCAGAAAACCAAAACCCTGCCTCTCCTGATGTAGATGCCTGCCCTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046306.15 ENSMUST00000121033.8 |
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| CDS CCA 72 bp | TTTTCTGGTGGCAAGCTGGACAACTGTCCTGCTGTGTaGATCCTGATGTGCTCAATGAGCCTGGCCGTTCCT | + |
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Preference number: 6 (lower is better) Translates to: FSGGKLDNCPAV*ILMCSMSLAVP Trigger: AGGAACGGCCAGGCTCATTGAGCACATCAGGATCCACACAGCAGGACAGTTGTCCAGCTTGCCACCAGAAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121033.8 |
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| CDS CAA 72 bp | ATCAGGGCAGGCATCTACATCAGGAGAGGCAGGGTTTaGGTTTTCTGGTGGCAAGCTGGACAACTGTCCTGC | + |
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Preference number: 6 (lower is better) Translates to: IRAGIYIRRGRV*VFWWQAGQLSC Trigger: GCAGGACAGTTGTCCAGCTTGCCACCAGAAAACCAAAACCCTGCCTCTCCTGATGTAGATGCCTGCCCTGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046306.15 ENSMUST00000121033.8 |
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| CDS GCA 72 bp | GTTTTGGTTTTCTGGTGGCAAGCTGGACAACTGTCCTaGTGTGTGGATCCTGATGTGCTCAATGAGCCTGGC | + |
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Preference number: 6 (lower is better) Translates to: VLVFWWQAGQLS*CVDPDVLNEPG Trigger: GCCAGGCTCATTGAGCACATCAGGATCCACACAGCAGGACAGTTGTCCAGCTTGCCACCAGAAAACCAAAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000121033.8 |
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| CDS CCA 72 bp | CAAAGGGTTGTCAACCATGAGTTCTTGGGGGTCCCTTaGCAGGCCACCAGTTGGTGTAGTTTTAGCCATAGC | + |
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Preference number: 6 (lower is better) Translates to: QRVVNHEFLGVP*QATSWCSFSHS Trigger: GCTATGGCTAAAACTACACCAACTGGTGGCCTGCCAAGGGACCCCCAAGAACTCATGGTTGACAACCCTTTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000046306.15 |
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| CDS CAA 72 bp | AGAGAGCTGATTCAAAGGGTTGTCAACCATGAGTTCTaGGGGGTCCCTTGGCAGGCCACCAGTTGGTGTAGT | + |
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Preference number: 6 (lower is better) Translates to: RELIQRVVNHEF*GVPWQATSWCS Trigger: ACTACACCAACTGGTGGCCTGCCAAGGGACCCCCAAGAACTCATGGTTGACAACCCTTTGAATCAGCTCTCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000046306.15 |
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| CDS CAA 90 bp | AGGCTTTTCATCAGGGCAGGCATCTACATCAGGAGAGGCAGGGTTTaGGTTTTCTGGTGGCAAGCTGGACAACTGTCCTGCTGTGTGGAT | + |
|
Preference number: 6 (lower is better) Translates to: RLFIRAGIYIRRGRV*VFWWQAGQLSCCVD Trigger: ATCCACACAGCAGGACAGTTGTCCAGCTTGCCACCAGAAAACCAAAACCCTGCCTCTCCTGATGTAGATGCCTGCCCTGATGAAAAGCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000121033.8 |
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| CDS GCA 72 bp | TGCGCCTTCGATGGTGGGACAGGTTACTTCGGTCACTaGAGCGGAAGGAGCACAATTCACATTTGTATGGTT | + |
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Preference number: 6 (lower is better) Translates to: CAFDGGTGYFGH*SGRSTIHICMV Trigger: AACCATACAAATGTGAATTGTGCTCCTTCCGCTGCAGTGACCGAAGTAACCTGTCCCACCATCGAAGGCGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046306.15 |
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| CDS CCA 72 bp | CATGAGTTCTTGGGGGTCCCTTGGCAGGCCACCAGTTaGTGTAGTTTTAGCCATAGCTTCATAGGAGTCAGT | + |
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Preference number: 6 (lower is better) Translates to: HEFLGVPWQATS*CSFSHSFIGVS Trigger: ACTGACTCCTATGAAGCTATGGCTAAAACTACACCAACTGGTGGCCTGCCAAGGGACCCCCAAGAACTCATG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000046306.15 |
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| CDS TCA 72 bp | GGCAAGCTGGACAACTGTCCTGCTAAAGTAGAGAGCTaGTTCAAAGGGTTGTCAACCATGAGTTCTTGGGGG | + |
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Preference number: 6 (lower is better) Translates to: GKLDNCPAKVES*FKGLSTMSSWG Trigger: CCCCCAAGAACTCATGGTTGACAACCCTTTGAATCAGCTCTCTACTTTAGCAGGACAGTTGTCCAGCTTGCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046306.15 |
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| CDS CAA 90 bp | CTGCTTAAGGAAGACCTGGTACCTTTAATTGGTACCATTTTATGTTaGCGCCTTCGATGGTGGGACAGGTTACTTCGGTCACTGCAGCGG | + |
|
Preference number: 6 (lower is better) Translates to: LLKEDLVPLIGTILC*RLRWWDRLLRSLQR Trigger: CCGCTGCAGTGACCGAAGTAACCTGTCCCACCATCGAAGGCGCAAACATAAAATGGTACCAATTAAAGGTACCAGGTCTTCCTTAAGCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046306.15 |
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| CDS TCA 72 bp | TCCCTGAAGAGTCTCTGCTTCTTTGTCCCCACTAACTaGTCCCGAAATCATGTTCACATGATGCGTCTGCTG | + |
|
Preference number: 6 (lower is better) Translates to: SLKSLCFFVPTN*SRNHVHMMRLL Trigger: CAGCAGACGCATCATGTGAACATGATTTCGGGATCAGTTAGTGGGGACAAAGAAGCAGAGACTCTTCAGGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000046306.15 ENSMUST00000121033.8 ENSMUST00000128432.3 ENSMUST00000154602.8 ENSMUST00000207243.2 |
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| CDS TCA 72 bp | TACTTGTCTTTACATTTGCACCCACATACGTTACACTaGAAGGGGCTGTCATACCCATGGCACCCCATGTGG | + |
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Preference number: 6 (lower is better) Translates to: YLSLHLHPHTLH*KGLSYPWHPMW Trigger: CCACATGGGGTGCCATGGGTATGACAGCCCCTTTCAGTGTAACGTATGTGGGTGCAAATGTAAAGACAAGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046306.15 ENSMUST00000121033.8 |
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| CDS CCA 72 bp | TTAATTGGTACCATTTTATGTTTGCGCCTTCGATGGTaGGACAGGTTACTTCGGTCACTGCAGCGGAAGGAG | + |
|
Preference number: 6 (lower is better) Translates to: LIGTILCLRLRW*DRLLRSLQRKE Trigger: CTCCTTCCGCTGCAGTGACCGAAGTAACCTGTCCCACCATCGAAGGCGCAAACATAAAATGGTACCAATTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046306.15 |
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| CDS CCA 72 bp | CCTTTAATTGGTACCATTTTATGTTTGCGCCTTCGATaGTGGGACAGGTTACTTCGGTCACTGCAGCGGAAG | + |
|
Preference number: 6 (lower is better) Translates to: PLIGTILCLRLR*WDRLLRSLQRK Trigger: CTTCCGCTGCAGTGACCGAAGTAACCTGTCCCACCATCGAAGGCGCAAACATAAAATGGTACCAATTAAAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046306.15 |
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| CDS TCA 72 bp | TTGTCCCCACTAACTGATCCCGAAATCATGTTCACATaGTGCGTCTGCTGGGTCAGGTATTCCTGGAAATCT | + |
|
Preference number: 6 (lower is better) Translates to: LSPLTDPEIMFT*CVCWVRYSWKS Trigger: AGATTTCCAGGAATACCTGACCCAGCAGACGCATCATGTGAACATGATTTCGGGATCAGTTAGTGGGGACAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000046306.15 ENSMUST00000121033.8 ENSMUST00000128432.3 ENSMUST00000154602.8 ENSMUST00000207243.2 |
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| CDS TCA 72 bp | CTGGTTTCTGGACCACCATGGAAGGTGGACTTAAGTTaGTTAGTGCTCTTCTGCTATACCCCAGATTGCTTG | + |
|
Preference number: 6 (lower is better) Translates to: LVSGPPWKVDLS*LVLFCYTPDCL Trigger: CAAGCAATCTGGGGTATAGCAGAAGAGCACTAATCAACTTAAGTCCACCTTCCATGGTGGTCCAGAAACCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046306.15 |
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| CDS CAA 72 bp | GAAGACCTGGTACCTTTAATTGGTACCATTTTATGTTaGCGCCTTCGATGGTGGGACAGGTTACTTCGGTCA | + |
|
Preference number: 6 (lower is better) Translates to: EDLVPLIGTILC*RLRWWDRLLRS Trigger: TGACCGAAGTAACCTGTCCCACCATCGAAGGCGCAAACATAAAATGGTACCAATTAAAGGTACCAGGTCTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046306.15 |
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| CDS CAA 72 bp | TCTGGTTTCTGGACCACCATGGAAGGTGGACTTAAGTaGATTAGTGCTCTTCTGCTATACCCCAGATTGCTT | + |
|
Preference number: 6 (lower is better) Translates to: SGFWTTMEGGLK*ISALLLYPRLL Trigger: AAGCAATCTGGGGTATAGCAGAAGAGCACTAATCAACTTAAGTCCACCTTCCATGGTGGTCCAGAAACCAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046306.15 |
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| CDS CCA 72 bp | TTTAGCCATAGCTTCATAGGAGTCAGTCTGAATATTTaGGATTTCGTGTGTAAAATCATTAAGGTAGTCTGG | + |
|
Preference number: 6 (lower is better) Translates to: FSHSFIGVSLNI*DFVCKIIKVVW Trigger: CCAGACTACCTTAATGATTTTACACACGAAATCCCAAATATTCAGACTGACTCCTATGAAGCTATGGCTAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046306.15 |
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