Pregenerated sensors for IKZF3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000018168Ensembl transcript IDs: ENSMUST00000103141.4
Found 130 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AACGTGAAGGGAGGGGGACTACACGCTAAGGCTTCTGCCTTGTGTTaGTGCCCAAGAGCAAGGGCAGCTGGGCGGCTCTTCCGCTGTGTG | + |
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Preference number: 1 (lower is better) Translates to: NVKGGGLHAKASALC*CPRARAAGRLFRCV Trigger: CACACAGCGGAAGAGCCGCCCAGCTGCCCTTGCTCTTGGGCACCAACACAAGGCAGAAGCCTTAGCGTGTAGTCCCCCTCCCTTCACGTT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000103141.4 |
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| 3UTR GCA 90 bp | TGTGTGGATCTGGGCATAGGATCAAAGGGCTTTTCCACATATGGCTaGTGTATTCCAGTGAATGACTCCTGCGGCCCACGGAGGACTGTT | + |
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Preference number: 1 (lower is better) Translates to: CVDLGIGSKGFSTYG*CIPVNDSCGPRRTV Trigger: AACAGTCCTCCGTGGGCCGCAGGAGTCATTCACTGGAATACAGCAGCCATATGTGGAAAAGCCCTTTGATCCTATGCCCAGATCCACACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103141.4 |
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| 3UTR GCA 90 bp | TGTTCTTTGGGGTTTCAGCCAGTACTCCACCAAGGTGACAAGGGTTaGCAACCAGTCAACCTTACACGCTCTACTCAGCCAACCTCTCTT | + |
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Preference number: 1 (lower is better) Translates to: CSLGFQPVLHQGDKG*QPVNLTRSTQPTSL Trigger: AAGAGAGGTTGGCTGAGTAGAGCGTGTAAGGTTGACTGGTTGGCAACCCTTGTCACCTTGGTGGAGTACTGGCTGAAACCCCAAAGAACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103141.4 |
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| 3UTR TCA 90 bp | ACTTTTCAAATGTTCTTTGGGGTTTCAGCCAGTACTCCACCAAGGTaGCAAGGGTTGCCAACCAGTCAACCTTACACGCTCTACTCAGCC | + |
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Preference number: 1 (lower is better) Translates to: TFQMFFGVSASTPPR*QGLPTSQPYTLYSA Trigger: GGCTGAGTAGAGCGTGTAAGGTTGACTGGTTGGCAACCCTTGTCACCTTGGTGGAGTACTGGCTGAAACCCCAAAGAACATTTGAAAAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103141.4 |
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| 3UTR CCA 90 bp | TTCACCCTTGTGACCGTAGGTAAAGGAGAAGGGTCCTTGCTCAGGTaGCTTCAGTTTTGTTTGATAGGAAGTGGGTTGATGCTCCAAGAA | + |
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Preference number: 1 (lower is better) Translates to: FTLVTVGKGEGSLLR*LQFCLIGSGLMLQE Trigger: TTCTTGGAGCATCAACCCACTTCCTATCAAACAAAACTGAAGCCACCTGAGCAAGGACCCTTCTCCTTTACCTACGGTCACAAGGGTGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103141.4 |
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| 3UTR TCA 90 bp | CTGAATGAAGACAGTTATTTCCCTGACTGTTCATGTGGACATGATTaGGAGCTAACAGAACTGGGTGGGACTGTGGGTTTGAGTTCAGTC | + |
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Preference number: 1 (lower is better) Translates to: LNEDSYFPDCSCGHD*ELTELGGTVGLSSV Trigger: GACTGAACTCAAACCCACAGTCCCACCCAGTTCTGTTAGCTCTCAATCATGTCCACATGAACAGTCAGGGAAATAACTGTCTTCATTCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103141.4 |
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| 3UTR TCA 90 bp | TCTACCAATCCCAATCAAAGGAGACAAATACCACCCCTCGGTGCATaGCTCTGCGGTTTCAATGATACCCAATATTTAAACGCATCAGTT | + |
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Preference number: 1 (lower is better) Translates to: STNPNQRRQIPPLGA*LCGFNDTQYLNASV Trigger: AACTGATGCGTTTAAATATTGGGTATCATTGAAACCGCAGAGTCATGCACCGAGGGGTGGTATTTGTCTCCTTTGATTGGGATTGGTAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103141.4 |
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| 3UTR CCA 90 bp | TCCAGTGCTTGTTTATGGAGCATTTTTCCAAGAATCTTGATGTCTTaGTGCCTGTGTGACAAAGGTGACTACCTGGTCTATCTACAGAAC | + |
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Preference number: 1 (lower is better) Translates to: SSACLWSIFPRILMS*CLCDKGDYLVYLQN Trigger: GTTCTGTAGATAGACCAGGTAGTCACCTTTGTCACACAGGCACCAAGACATCAAGATTCTTGGAAAAATGCTCCATAAACAAGCACTGGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000103141.4 |
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| 3UTR TCA 90 bp | AAGGAGACAAATACCACCCCTCGGTGCATGACTCTGCGGTTTCAATaGTACCCAATATTTAAACGCATCAGTTCTTCTGGAGTAGAATTT | + |
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Preference number: 1 (lower is better) Translates to: KETNTTPRCMTLRFQ*YPIFKRISSSGVEF Trigger: AAATTCTACTCCAGAAGAACTGATGCGTTTAAATATTGGGTATCATTGAAACCGCAGAGTCATGCACCGAGGGGTGGTATTTGTCTCCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103141.4 |
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| 3UTR GCA 90 bp | AGTGCTTGTTTATGGAGCATTTTTCCAAGAATCTTGATGTCTTGGTaGCTGTGTGACAAAGGTGACTACCTGGTCTATCTACAGAACAAG | + |
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Preference number: 1 (lower is better) Translates to: SACLWSIFPRILMSW*LCDKGDYLVYLQNK Trigger: CTTGTTCTGTAGATAGACCAGGTAGTCACCTTTGTCACACAGGCACCAAGACATCAAGATTCTTGGAAAAATGCTCCATAAACAAGCACT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000103141.4 |
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| 3UTR TCA 90 bp | GAAGTGACCATCAAGAGGGTTTGGATGCTACTCTTATTTTATGGTTaGGGCCATTTGTCTTTTAGAGTTAACCAATTAGTTGCAAATATG | + |
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Preference number: 1 (lower is better) Translates to: EVTIKRVWMLLLFYG*GHLSFRVNQLVANM Trigger: CATATTTGCAACTAATTGGTTAACTCTAAAAGACAAATGGCCTCAACCATAAAATAAGAGTAGCATCCAAACCCTCTTGATGGTCACTTC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103141.4 |
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| 3UTR-3UTR CCA 90 bp | CTTCCCAGACTCTCAGTGGGATGTGGCAGCTCCTCTTTAGGACAGCAGAAGCCCCTGATCTCACGCCTGTaGGGTGGGAGGTGGTGGGGA | + |
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Preference number: 2 (lower is better) Translates to: LPRLSVGCGSSSLGQQKPLISRL*GGRWWG Trigger: TCCCCACCACCTCCCACCCCACAGGCGTGAGATCAG...GGGCTTCTGCTGTCCTAAAGAGGAGCTGCCACATCCCACTGAGAGTCTGGGAAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103141.4 |
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| 3UTR CAA 90 bp | GTTGTACCTGGCAGGCACTGTACCCTTAAACTATGTCCCCACCACTaGCTCTACCAATCCCAATCAAAGGAGACAAATACCACCCCTCGG | + |
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Preference number: 2 (lower is better) Translates to: VVPGRHCTLKLCPHH*LYQSQSKETNTTPR Trigger: CCGAGGGGTGGTATTTGTCTCCTTTGATTGGGATTGGTAGAGCAAGTGGTGGGGACATAGTTTAAGGGTACAGTGCCTGCCAGGTACAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103141.4 |
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| 3UTR-3UTR CCA 90 bp | GTCCCCACCACTTGCTCTACCAATCCCAATCAAAGGAGACAAATACCACCCCTCGCTAACAGAACTGGGTaGGACTGTGGGTTTGAGTTC | + |
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Preference number: 2 (lower is better) Translates to: VPTTCSTNPNQRRQIPPLANRTG*DCGFEF Trigger: GAACTCAAACCCACAGTCCCACCCAGTTCTGTTAGC...GAGGGGTGGTATTTGTCTCCTTTGATTGGGATTGGTAGAGCAAGTGGTGGGGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103141.4 |
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| 3UTR-3UTR CCA 90 bp | CTTCCCAGACTCTCAGTGGGATGTGGCAGCTCCTCTTTAGGACAGCAGAAGCCCACGCATCAGTTCTTCTaGAGTAGAATTTTCCTCCAG | + |
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Preference number: 2 (lower is better) Translates to: LPRLSVGCGSSSLGQQKPTHQFF*SRIFLQ Trigger: CTGGAGGAAAATTCTACTCCAGAAGAACTGATGCGT...GGGCTTCTGCTGTCCTAAAGAGGAGCTGCCACATCCCACTGAGAGTCTGGGAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103141.4 |
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| 3UTR-3UTR TCA 90 bp | CTGGTCTATCTACAGAACAAGATCAGCCTTCCCAGACTCTCAGTGGGATGTGGCTCATGTGGACATGATTaGGAGCTAACAGAACTGGGT | + |
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Preference number: 2 (lower is better) Translates to: LVYLQNKISLPRLSVGCGSCGHD*ELTELG Trigger: ACCCAGTTCTGTTAGCTCTCAATCATGTCCACATGA...GCCACATCCCACTGAGAGTCTGGGAAGGCTGATCTTGTTCTGTAGATAGACCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103141.4 |
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| 3UTR-3UTR TCA 90 bp | AAGTGGGTTGATGCTCCAAGAATAGGGTCTTCCATTACTATCAGCAGGTCCTTACTTGCTGTTAGAACGTaGAGGGAGGGGGACTACACG | + |
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Preference number: 2 (lower is better) Translates to: KWVDAPRIGSSITISRSLLAVRT*REGDYT Trigger: CGTGTAGTCCCCCTCCCTTCACGTTCTAACAGCAAG...TAAGGACCTGCTGATAGTAATGGAAGACCCTATTCTTGGAGCATCAACCCACTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000103141.4 |
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| 3UTR-3UTR TCA 90 bp | AGTCAACCTTACACGCTCTACTCAGCCAACCTCTCTTCCCTCCATTTTCTTTCTCCCATCAAACTCAACTaGTGGGAAGGGAGGTTTCAC | + |
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Preference number: 2 (lower is better) Translates to: SQPYTLYSANLSSLHFLSPIKLN*WEGRFH Trigger: GTGAAACCTCCCTTCCCATCAGTTGAGTTTGATGGG...AGAAAGAAAATGGAGGGAAGAGAGGTTGGCTGAGTAGAGCGTGTAAGGTTGACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103141.4 |
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| 3UTR-3UTR CCA 90 bp | GCAAGCACGGTTGGTGGCCTCGATTCCAGTGCTTGTTTATGGAGCATTTTTCCAGGGTCCTTGCTCAGGTaGCTTCAGTTTTGTTTGATA | + |
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Preference number: 2 (lower is better) Translates to: ASTVGGLDSSACLWSIFPGSLLR*LQFCLI Trigger: TATCAAACAAAACTGAAGCCACCTGAGCAAGGACCC...TGGAAAAATGCTCCATAAACAAGCACTGGAATCGAGGCCACCAACCGTGCTTGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000103141.4 |
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| 3UTR-3UTR GCA 90 bp | ACCAGTCAACCTTACACGCTCTACTCAGCCAACCTCTCTTCCCTCCATTTTCTTTATGTCCCCACCACTTaGTCTACCAATCCCAATCAA | + |
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Preference number: 2 (lower is better) Translates to: TSQPYTLYSANLSSLHFLYVPTT*STNPNQ Trigger: TTGATTGGGATTGGTAGAGCAAGTGGTGGGGACATA...AAGAAAATGGAGGGAAGAGAGGTTGGCTGAGTAGAGCGTGTAAGGTTGACTGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103141.4 |
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| 3UTR CAA 90 bp | AAATATGAGCTTGGCAAGCACGGTTGGTGGCCTCGATTCCAGTGCTaGTTTATGGAGCATTTTTCCAAGAATCTTGATGTCTTGGTGCCT | + |
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Preference number: 2 (lower is better) Translates to: KYELGKHGWWPRFQC*FMEHFSKNLDVLVP Trigger: AGGCACCAAGACATCAAGATTCTTGGAAAAATGCTCCATAAACAAGCACTGGAATCGAGGCCACCAACCGTGCTTGCCAAGCTCATATTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000103141.4 |
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| 3UTR CAA 90 bp | GGCCATTTGTCTTTTAGAGTTAACCAATTAGTTGCAAATATGAGCTaGGCAAGCACGGTTGGTGGCCTCGATTCCAGTGCTTGTTTATGG | + |
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Preference number: 2 (lower is better) Translates to: GHLSFRVNQLVANMS*ASTVGGLDSSACLW Trigger: CCATAAACAAGCACTGGAATCGAGGCCACCAACCGTGCTTGCCAAGCTCATATTTGCAACTAATTGGTTAACTCTAAAAGACAAATGGCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103141.4 |
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| 3UTR-3UTR CCA 90 bp | AGTGCTTGTTTATGGAGCATTTTTCCAAGAATCTTGATGTCTTGGTGCCTGTGTACTCTCAGTGGGATGTaGCAGCTCCTCTTTAGGACA | + |
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Preference number: 2 (lower is better) Translates to: SACLWSIFPRILMSWCLCTLSGM*QLLFRT Trigger: TGTCCTAAAGAGGAGCTGCCACATCCCACTGAGAGT...ACACAGGCACCAAGACATCAAGATTCTTGGAAAAATGCTCCATAAACAAGCACT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000103141.4 |
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| 3UTR-3UTR TCA 90 bp | TACCTGGTCTATCTACAGAACAAGATCAGCCTTCCCAGACTCTCAGTGGGATGTTCTGCAAACAGTTTCTaGATGAAGACAGTTATTTCC | + |
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Preference number: 2 (lower is better) Translates to: YLVYLQNKISLPRLSVGCSANSF*MKTVIS Trigger: GGAAATAACTGTCTTCATTCAGAAACTGTTTGCAGA...ACATCCCACTGAGAGTCTGGGAAGGCTGATCTTGTTCTGTAGATAGACCAGGTA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103141.4 |
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| 3UTR-3UTR GCA 90 bp | TCAAAGCCAGAAGTGACCATCAAGAGGGTTTGGATGCTACTCTTATTTTATGGTAAGGAGAAGGGTCCTTaGTCAGGTGGCTTCAGTTTT | + |
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Preference number: 2 (lower is better) Translates to: SKPEVTIKRVWMLLLFYGKEKGP*SGGFSF Trigger: AAAACTGAAGCCACCTGAGCAAGGACCCTTCTCCTT...ACCATAAAATAAGAGTAGCATCCAAACCCTCTTGATGGTCACTTCTGGCTTTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103141.4 |
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| 3UTR-3UTR GCA 90 bp | AGAAGGAAAATGCTAACATACCGGGAATTTGGGATTCCTGGCTCTGGCAGAAATTCGTGTATACACGACTaGATGATCAAAACCCTTCCT | + |
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Preference number: 2 (lower is better) Translates to: RRKMLTYREFGIPGSGRNSCIHD*MIKTLP Trigger: AGGAAGGGTTTTGATCATGCAGTCGTGTATACACGA...ATTTCTGCCAGAGCCAGGAATCCCAAATTCCCGGTATGTTAGCATTTTCCTTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103141.4 |
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| 3UTR-3UTR TCA 90 bp | TCAAAGCCAGAAGTGACCATCAAGAGGGTTTGGATGCTACTCTTATTTTATGGTACTCTGCGGTTTCAATaGTACCCAATATTTAAACGC | + |
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Preference number: 2 (lower is better) Translates to: SKPEVTIKRVWMLLLFYGTLRFQ*YPIFKR Trigger: GCGTTTAAATATTGGGTATCATTGAAACCGCAGAGT...ACCATAAAATAAGAGTAGCATCCAAACCCTCTTGATGGTCACTTCTGGCTTTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103141.4 |
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| 3UTR CAA 90 bp | AGATGGCTGTCTATTGCTACAAAAGATAATGAACCAGATACTTCTTaGGCTTTTAAATCCCATCAAACTCAACTGATGGGAAGGGAGGTT | + |
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Preference number: 2 (lower is better) Translates to: RWLSIATKDNEPDTS*AFKSHQTQLMGREV Trigger: AACCTCCCTTCCCATCAGTTGAGTTTGATGGGATTTAAAAGCCAAAGAAGTATCTGGTTCATTATCTTTTGTAGCAATAGACAGCCATCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103141.4 |
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| 3UTR CCA 72 bp | GGAGGGGGACTACACGCTAAGGCTTCTGCCTTGTGTTaGTGCCCAAGAGCAAGGGCAGCTGGGCGGCTCTTC | + |
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Preference number: 3 (lower is better) Translates to: GGGLHAKASALC*CPRARAAGRLF Trigger: GAAGAGCCGCCCAGCTGCCCTTGCTCTTGGGCACCAACACAAGGCAGAAGCCTTAGCGTGTAGTCCCCCTCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000103141.4 |
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| 3UTR CCA 72 bp | TTCTGCCTTGTGTTGGTGCCCAAGAGCAAGGGCAGCTaGGCGGCTCTTCCGCTGTGTGGATCTGGGCATAGG | + |
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Preference number: 3 (lower is better) Translates to: FCLVLVPKSKGS*AALPLCGSGHR Trigger: CCTATGCCCAGATCCACACAGCGGAAGAGCCGCCCAGCTGCCCTTGCTCTTGGGCACCAACACAAGGCAGAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103141.4 |
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| 3UTR-3UTR CAA 90 bp | CTTCCCAGACTCTCAGTGGGATGTGGCAGCTCCTCTTTAGGACAGCAGAAGCCCCCCCTGGTGTGGTGGTaGTACCTGGCAGGCACTGTA | + |
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Preference number: 3 (lower is better) Translates to: LPRLSVGCGSSSLGQQKPPLVWW*YLAGTV Trigger: TACAGTGCCTGCCAGGTACAACCACCACACCAGGGG...GGGCTTCTGCTGTCCTAAAGAGGAGCTGCCACATCCCACTGAGAGTCTGGGAAG 59% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt. Matches the following 1 transcripts: ENSMUST00000103141.4 |
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| 3UTR CCA 72 bp | CTGTCCCTGATCTCACGCCTGTGGGGTGGGAGGTGGTaGGGAACTAAGCAGCACATTTTGGCTCCTTTGCCA | + |
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Preference number: 3 (lower is better) Translates to: LSLISRLWGGRW*GTKQHILAPLP Trigger: TGGCAAAGGAGCCAAAATGTGCTGCTTAGTTCCCCACCACCTCCCACCCCACAGGCGTGAGATCAGGGACAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103141.4 |
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| 3UTR GCA 72 bp | TCCACATATGGCTGCTGTATTCCAGTGAATGACTCCTaGGGCCCACGGAGGACTGTTCCAATTGGCCGGGAG | + |
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Preference number: 3 (lower is better) Translates to: STYGCCIPVNDS*GPRRTVPIGRE Trigger: CTCCCGGCCAATTGGAACAGTCCTCCGTGGGCCGCAGGAGTCATTCACTGGAATACAGCAGCCATATGTGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103141.4 |
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| 3UTR CCA 72 bp | AGAACATCTGTGGTTCTGTCCCTGATCTCACGCCTGTaGGGTGGGAGGTGGTGGGGAACTAAGCAGCACATT | + |
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Preference number: 3 (lower is better) Translates to: RTSVVLSLISRL*GGRWWGTKQHI Trigger: AATGTGCTGCTTAGTTCCCCACCACCTCCCACCCCACAGGCGTGAGATCAGGGACAGAACCACAGATGTTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103141.4 |
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| 3UTR-3UTR CAA 90 bp | CTTCCCAGACTCTCAGTGGGATGTGGCAGCTCCTCTTTAGGACAGCAGAAGCCCCTATGTCCCCACCACTaGCTCTACCAATCCCAATCA | + |
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Preference number: 3 (lower is better) Translates to: LPRLSVGCGSSSLGQQKPLCPHH*LYQSQS Trigger: TGATTGGGATTGGTAGAGCAAGTGGTGGGGACATAG...GGGCTTCTGCTGTCCTAAAGAGGAGCTGCCACATCCCACTGAGAGTCTGGGAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103141.4 |
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| 3UTR TCA 72 bp | TTACTGTACGGCCACCTCTTCCTTGCTGTTAGAACGTaGAGGGAGGGGGACTACACGCTAAGGCTTCTGCCT | + |
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Preference number: 3 (lower is better) Translates to: LLYGHLFLAVRT*REGDYTLRLLP Trigger: AGGCAGAAGCCTTAGCGTGTAGTCCCCCTCCCTTCACGTTCTAACAGCAAGGAAGAGGTGGCCGTACAGTAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000103141.4 |
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| 3UTR GCA 72 bp | GGGTTTCAGCCAGTACTCCACCAAGGTGACAAGGGTTaGCAACCAGTCAACCTTACACGCTCTACTCAGCCA | + |
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Preference number: 3 (lower is better) Translates to: GFQPVLHQGDKG*QPVNLTRSTQP Trigger: TGGCTGAGTAGAGCGTGTAAGGTTGACTGGTTGGCAACCCTTGTCACCTTGGTGGAGTACTGGCTGAAACCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103141.4 |
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| 3UTR GCA 72 bp | GAAGCTGTAGATGCCAGCTCGTGTGTACACGGCTGCTaGAGATGCCAGCTCGTGTATACACGACTGCATGAT | + |
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Preference number: 3 (lower is better) Translates to: EAVDASSCVHGC*RCQLVYTRLHD Trigger: ATCATGCAGTCGTGTATACACGAGCTGGCATCTGCAGCAGCCGTGTACACACGAGCTGGCATCTACAGCTTC 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103141.4 |
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| 3UTR-3UTR CAA 90 bp | CTTCCCAGACTCTCAGTGGGATGTGGCAGCTCCTCTTTAGGACAGCAGAAGCCCCTTTTCAAATGTTCTTaGGGGTTTCAGCCAGTACTC | + |
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Preference number: 3 (lower is better) Translates to: LPRLSVGCGSSSLGQQKPLFKCS*GFQPVL Trigger: GAGTACTGGCTGAAACCCCAAAGAACATTTGAAAAG...GGGCTTCTGCTGTCCTAAAGAGGAGCTGCCACATCCCACTGAGAGTCTGGGAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000103141.4 |
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| 3UTR TCA 72 bp | ATGTTCTTTGGGGTTTCAGCCAGTACTCCACCAAGGTaGCAAGGGTTGCCAACCAGTCAACCTTACACGCTC | + |
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Preference number: 3 (lower is better) Translates to: MFFGVSASTPPR*QGLPTSQPYTL Trigger: GAGCGTGTAAGGTTGACTGGTTGGCAACCCTTGTCACCTTGGTGGAGTACTGGCTGAAACCCCAAAGAACAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103141.4 |
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| 3UTR-3UTR CAA 90 bp | AGAAGGAAAATGCTAACATACCGGGAATTTGGGATTCCTGGCTCTGGCAGAAATGGAGGACTGTTCCAATaGGCCGGGAGCTCCAGTAGA | + |
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Preference number: 3 (lower is better) Translates to: RRKMLTYREFGIPGSGRNGGLFQ*AGSSSR Trigger: TCTACTGGAGCTCCCGGCCAATTGGAACAGTCCTCC...ATTTCTGCCAGAGCCAGGAATCCCAAATTCCCGGTATGTTAGCATTTTCCTTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103141.4 |
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| 3UTR-3UTR CAA 90 bp | AACCTGTGGCTATTGAATAATCATGTATCAAAGCCAGAAGTGACCATCAAGAGGGCTTGGCAAGCACGGTaGGTGGCCTCGATTCCAGTG | + |
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Preference number: 3 (lower is better) Translates to: NLWLLNNHVSKPEVTIKRAWQAR*VASIPV Trigger: CACTGGAATCGAGGCCACCAACCGTGCTTGCCAAGC...CCTCTTGATGGTCACTTCTGGCTTTGATACATGATTATTCAATAGCCACAGGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103141.4 |
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| 3UTR CCA 72 bp | GTGACCGTAGGTAAAGGAGAAGGGTCCTTGCTCAGGTaGCTTCAGTTTTGTTTGATAGGAAGTGGGTTGATG | + |
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Preference number: 3 (lower is better) Translates to: VTVGKGEGSLLR*LQFCLIGSGLM Trigger: CATCAACCCACTTCCTATCAAACAAAACTGAAGCCACCTGAGCAAGGACCCTTCTCCTTTACCTACGGTCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103141.4 |
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| 3UTR TCA 72 bp | GACAGTTATTTCCCTGACTGTTCATGTGGACATGATTaGGAGCTAACAGAACTGGGTGGGACTGTGGGTTTG | + |
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Preference number: 3 (lower is better) Translates to: DSYFPDCSCGHD*ELTELGGTVGL Trigger: CAAACCCACAGTCCCACCCAGTTCTGTTAGCTCTCAATCATGTCCACATGAACAGTCAGGGAAATAACTGTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103141.4 |
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| 3UTR GCA 72 bp | GAGCTTGGCAAGCACGGTTGGTGGCCTCGATTCCAGTaGTTGTTTATGGAGCATTTTTCCAAGAATCTTGAT | + |
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Preference number: 3 (lower is better) Translates to: ELGKHGWWPRFQ*LFMEHFSKNLD Trigger: ATCAAGATTCTTGGAAAAATGCTCCATAAACAAGCACTGGAATCGAGGCCACCAACCGTGCTTGCCAAGCTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000103141.4 |
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| 3UTR CCA 72 bp | AGCACGGTTGGTGGCCTCGATTCCAGTGCTTGTTTATaGAGCATTTTTCCAAGAATCTTGATGTCTTGGTGC | + |
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Preference number: 3 (lower is better) Translates to: STVGGLDSSACL*SIFPRILMSWC Trigger: GCACCAAGACATCAAGATTCTTGGAAAAATGCTCCATAAACAAGCACTGGAATCGAGGCCACCAACCGTGCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000103141.4 |
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| 3UTR CCA 72 bp | CCAATTAGTTGCAAATATGAGCTTGGCAAGCACGGTTaGTGGCCTCGATTCCAGTGCTTGTTTATGGAGCAT | + |
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Preference number: 3 (lower is better) Translates to: PISCKYELGKHG*WPRFQCLFMEH Trigger: ATGCTCCATAAACAAGCACTGGAATCGAGGCCACCAACCGTGCTTGCCAAGCTCATATTTGCAACTAATTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103141.4 |
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| 3UTR-3UTR CAA 90 bp | CTGGTCTATCTACAGAACAAGATCAGCCTTCCCAGACTCTCAGTGGGATGTGGCGAACCAGATACTTCTTaGGCTTTTAAATCCCATCAA | + |
|
Preference number: 3 (lower is better) Translates to: LVYLQNKISLPRLSVGCGEPDTS*AFKSHQ Trigger: TTGATGGGATTTAAAAGCCAAAGAAGTATCTGGTTC...GCCACATCCCACTGAGAGTCTGGGAAGGCTGATCTTGTTCTGTAGATAGACCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103141.4 |
||
| 3UTR TCA 72 bp | AATACCACCCCTCGGTGCATGACTCTGCGGTTTCAATaGTACCCAATATTTAAACGCATCAGTTCTTCTGGA | + |
|
Preference number: 3 (lower is better) Translates to: NTTPRCMTLRFQ*YPIFKRISSSG Trigger: TCCAGAAGAACTGATGCGTTTAAATATTGGGTATCATTGAAACCGCAGAGTCATGCACCGAGGGGTGGTATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103141.4 |
||
| 3UTR TCA 72 bp | CCAGTGCTTGTTTATGGAGCATTTTTCCAAGAATCTTaGTGTCTTGGTGCCTGTGTGACAAAGGTGACTACC | + |
|
Preference number: 3 (lower is better) Translates to: PVLVYGAFFQES*CLGACVTKVTT Trigger: GGTAGTCACCTTTGTCACACAGGCACCAAGACATCAAGATTCTTGGAAAAATGCTCCATAAACAAGCACTGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000103141.4 |
||
| 3UTR CCA 72 bp | ATTAGTTGCAAATATGAGCTTGGCAAGCACGGTTGGTaGCCTCGATTCCAGTGCTTGTTTATGGAGCATTTT | + |
|
Preference number: 3 (lower is better) Translates to: ISCKYELGKHGW*PRFQCLFMEHF Trigger: AAAATGCTCCATAAACAAGCACTGGAATCGAGGCCACCAACCGTGCTTGCCAAGCTCATATTTGCAACTAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103141.4 |
||
| 3UTR-3UTR CAA 90 bp | TCAAAGCCAGAAGTGACCATCAAGAGGGTTTGGATGCTACTCTTATTTTATGGTCAGGTGGCTTCAGTTTaGTTTGATAGGAAGTGGGTT | + |
|
Preference number: 3 (lower is better) Translates to: SKPEVTIKRVWMLLLFYGQVASV*FDRKWV Trigger: AACCCACTTCCTATCAAACAAAACTGAAGCCACCTG...ACCATAAAATAAGAGTAGCATCCAAACCCTCTTGATGGTCACTTCTGGCTTTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103141.4 |
||
| 3UTR GCA 72 bp | TTATGGAGCATTTTTCCAAGAATCTTGATGTCTTGGTaGCTGTGTGACAAAGGTGACTACCTGGTCTATCTA | + |
|
Preference number: 3 (lower is better) Translates to: LWSIFPRILMSW*LCDKGDYLVYL Trigger: TAGATAGACCAGGTAGTCACCTTTGTCACACAGGCACCAAGACATCAAGATTCTTGGAAAAATGCTCCATAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000103141.4 |
||
| 3UTR CCA 72 bp | TGTTTATGGAGCATTTTTCCAAGAATCTTGATGTCTTaGTGCCTGTGTGACAAAGGTGACTACCTGGTCTAT | + |
|
Preference number: 3 (lower is better) Translates to: CLWSIFPRILMS*CLCDKGDYLVY Trigger: ATAGACCAGGTAGTCACCTTTGTCACACAGGCACCAAGACATCAAGATTCTTGGAAAAATGCTCCATAAACA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000103141.4 |
||
| 3UTR TCA 72 bp | GAGGAATGTTTTAATTACTGGCATCGTATACATGAATaGGTAAGAGCCGAATCCATAAGCCCCTTAGAAGGA | + |
|
Preference number: 3 (lower is better) Translates to: EECFNYWHRIHE*VRAESISPLEG Trigger: TCCTTCTAAGGGGCTTATGGATTCGGCTCTTACTCATTCATGTATACGATGCCAGTAATTAAAACATTCCTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103141.4 |
||
| 3UTR TCA 72 bp | ATCAAGAGGGTTTGGATGCTACTCTTATTTTATGGTTaGGGCCATTTGTCTTTTAGAGTTAACCAATTAGTT | + |
|
Preference number: 3 (lower is better) Translates to: IKRVWMLLLFYG*GHLSFRVNQLV Trigger: AACTAATTGGTTAACTCTAAAAGACAAATGGCCTCAACCATAAAATAAGAGTAGCATCCAAACCCTCTTGAT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103141.4 |
||
| 3UTR CAA 72 bp | GCTCAGAGTGCTGGGCAGCTTCAGCCAGCAATGAGTTaGAGGCTTGCCGGGGCACCAGGAGACCCTGTTTTG | + |
|
Preference number: 4 (lower is better) Translates to: AQSAGQLQPAMS*RLAGAPGDPVL Trigger: CAAAACAGGGTCTCCTGGTGCCCCGGCAAGCCTCAAACTCATTGCTGGCTGAAGCTGCCCAGCACTCTGAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103141.4 |
||
| CDS-3UTR GCA 90 bp | GCAGGTCCTTACTGTACGGCCACCTCTTCCTTGCTGTTAGAACGTGAAGGGAGGGAGGCTGCTCCTCCGTaGTTTTCAGCTCCACAGTCG | + |
|
Preference number: 4 (lower is better) Translates to: AGPYCTATSSLLLEREGREAAPP*FSAPQS Trigger: CGACTGTGGAGCTGAAAAGCACGGAGGAGCAGCCTC...CCTCCCTTCACGTTCTAACAGCAAGGAAGAGGTGGCCGTACAGTAAGGACCTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103141.4 |
||
| CDS-3UTR GCA 90 bp | GCAAGCACGGTTGGTGGCCTCGATTCCAGTGCTTGTTTATGGAGCATTTTTCCAGAAGAGGCATCCCATTaGGGGCCTGGGGGAGGACCA | + |
|
Preference number: 4 (lower is better) Translates to: ASTVGGLDSSACLWSIFPEEASH*GPGGGP Trigger: TGGTCCTCCCCCAGGCCCGCAATGGGATGCCTCTTC...TGGAAAAATGCTCCATAAACAAGCACTGGAATCGAGGCCACCAACCGTGCTTGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000103141.4 |
||
| CDS-3UTR CCA 90 bp | GCAAGCACGGTTGGTGGCCTCGATTCCAGTGCTTGTTTATGGAGCATTTTTCCAGGAGCAGGCGGAGTCTaGACTAAGGGGCGAAGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: ASTVGGLDSSACLWSIFPGAGGV*TKGRRA Trigger: AGCCCTTCGCCCCTTAGTCCAGACTCCGCCTGCTCC...TGGAAAAATGCTCCATAAACAAGCACTGGAATCGAGGCCACCAACCGTGCTTGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000103141.4 |
||
| CDS-3UTR GCA 90 bp | TACCTGGTCTATCTACAGAACAAGATCAGCCTTCCCAGACTCTCAGTGGGATGTGGCGATCCTCGTGGTTaGTGTCGGTGTCTGTGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: YLVYLQNKISLPRLSVGCGDPRG*CRCLWS Trigger: ACTCCACAGACACCGACAGCAACCACGAGGATCGCC...ACATCCCACTGAGAGTCTGGGAAGGCTGATCTTGTTCTGTAGATAGACCAGGTA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103141.4 |
||
| CDS-3UTR CCA 90 bp | GTCCCCACCACTTGCTCTACCAATCCCAATCAAAGGAGACAAATACCACCCCTCGCGTTATTGATGGCTTaGTCCATCATCCGGGTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: VPTTCSTNPNQRRQIPPLALLMA*SIIRVC Trigger: GCAGACCCGGATGATGGACCAAGCCATCAATAACGC...GAGGGGTGGTATTTGTCTCCTTTGATTGGGATTGGTAGAGCAAGTGGTGGGGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103141.4 |
||
| CDS-3UTR CCA 90 bp | GCAAGCACGGTTGGTGGCCTCGATTCCAGTGCTTGTTTATGGAGCATTTTTCCAGTGTCTGTGGAGTCCTaGGCACTGTTATTGGGGGAC | + |
|
Preference number: 4 (lower is better) Translates to: ASTVGGLDSSACLWSIFPVSVES*ALLLGD Trigger: GTCCCCCAATAACAGTGCCCAGGACTCCACAGACAC...TGGAAAAATGCTCCATAAACAAGCACTGGAATCGAGGCCACCAACCGTGCTTGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000103141.4 |
||
| CDS-3UTR CCA 90 bp | CTGGTCTATCTACAGAACAAGATCAGCCTTCCCAGACTCTCAGTGGGATGTGGCTGCTGTCGGTGTCTGTaGAGTCCTGGGCACTGTTAT | + |
|
Preference number: 4 (lower is better) Translates to: LVYLQNKISLPRLSVGCGCCRCL*SPGHCY Trigger: ATAACAGTGCCCAGGACTCCACAGACACCGACAGCA...GCCACATCCCACTGAGAGTCTGGGAAGGCTGATCTTGTTCTGTAGATAGACCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103141.4 |
||
| CDS-3UTR CCA 90 bp | CTTCCATTACTATCAGCAGGTCCTTACTGTACGGCCACCTCTTCCTTGCTGTTAGGATCACGGAAACCATaGCACCCCATGTGGATGGTG | + |
|
Preference number: 4 (lower is better) Translates to: LPLLSAGPYCTATSSLLLGSRKP*HPMWMV Trigger: CACCATCCACATGGGGTGCCATGGTTTCCGTGATCC...TAACAGCAAGGAAGAGGTGGCCGTACAGTAAGGACCTGCTGATAGTAATGGAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103141.4 |
||
| CDS-3UTR GCA 90 bp | CTTCCATTACTATCAGCAGGTCCTTACTGTACGGCCACCTCTTCCTTGCTGTTACATTTCACTCTCTTCTaGATCTCCCATGGGCTCCGG | + |
|
Preference number: 4 (lower is better) Translates to: LPLLSAGPYCTATSSLLLHFTLF*ISHGLR Trigger: CCGGAGCCCATGGGAGATGCAGAAGAGAGTGAAATG...TAACAGCAAGGAAGAGGTGGCCGTACAGTAAGGACCTGCTGATAGTAATGGAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103141.4 |
||
| CDS-3UTR GCA 90 bp | TACCTGGTCTATCTACAGAACAAGATCAGCCTTCCCAGACTCTCAGTGGGATGTGGCTTTGATGTGTCTTaGCTCCACACTTGCAGCGTC | + |
|
Preference number: 4 (lower is better) Translates to: YLVYLQNKISLPRLSVGCGFDVS*LHTCSV Trigger: GACGCTGCAAGTGTGGAGGCAAGACACATCAAAGCC...ACATCCCACTGAGAGTCTGGGAAGGCTGATCTTGTTCTGTAGATAGACCAGGTA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103141.4 |
||
| CDS-3UTR TCA 90 bp | GTCCCCACCACTTGCTCTACCAATCCCAATCAAAGGAGACAAATACCACCCCTCGTATGGCTTCGCTTATaGACCATCAAGACGTTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: VPTTCSTNPNQRRQIPPLVWLRL*TIKTLK Trigger: CTTCAACGTCTTGATGGTTCATAAGCGAAGCCATAC...GAGGGGTGGTATTTGTCTCCTTTGATTGGGATTGGTAGAGCAAGTGGTGGGGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103141.4 |
||
| CDS-3UTR TCA 90 bp | AAGTGGGTTGATGCTCCAAGAATAGGGTCTTCCATTACTATCAGCAGGTCCTTAAAAGATGCCCCGCACTaGTTACACTGGAACGGGCGT | + |
|
Preference number: 4 (lower is better) Translates to: KWVDAPRIGSSITISRSLKDAPH*LHWNGR Trigger: ACGCCCGTTCCAGTGTAATCAGTGCGGGGCATCTTT...TAAGGACCTGCTGATAGTAATGGAAGACCCTATTCTTGGAGCATCAACCCACTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103141.4 |
||
| CDS-3UTR GCA 90 bp | AACCTGTGGCTATTGAATAATCATGTATCAAAGCCAGAAGTGACCATCAAGAGGCGGCAGCGTTCCTTGTaGTCCTCCAGGGAGCTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: NLWLLNNHVSKPEVTIKRRQRSL*SSRELL Trigger: GAGAAGCTCCCTGGAGGAGCACAAGGAACGCTGCCG...CCTCTTGATGGTCACTTCTGGCTTTGATACATGATTATTCAATAGCCACAGGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103141.4 |
||
| 3UTR CAA 72 bp | GGCAGGCACTGTACCCTTAAACTATGTCCCCACCACTaGCTCTACCAATCCCAATCAAAGGAGACAAATACC | + |
|
Preference number: 4 (lower is better) Translates to: GRHCTLKLCPHH*LYQSQSKETNT Trigger: GGTATTTGTCTCCTTTGATTGGGATTGGTAGAGCAAGTGGTGGGGACATAGTTTAAGGGTACAGTGCCTGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103141.4 |
||
| CDS-3UTR TCA 90 bp | AGAAGGAAAATGCTAACATACCGGGAATTTGGGATTCCTGGCTCTGGCAGAAATTTCCCATCTCGGCTTTaGTGTGTCTTGCCTCCACAC | + |
|
Preference number: 4 (lower is better) Translates to: RRKMLTYREFGIPGSGRNFPSRL*CVLPPH Trigger: GTGTGGAGGCAAGACACATCAAAGCCGAGATGGGAA...ATTTCTGCCAGAGCCAGGAATCCCAAATTCCCGGTATGTTAGCATTTTCCTTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103141.4 |
||
| CDS-3UTR GCA 90 bp | GTCCCCACCACTTGCTCTACCAATCCCAATCAAAGGAGACAAATACCACCCCTCGTCGCTGTATTCTCTTaGATAGCTGTAAGGCATTTC | + |
|
Preference number: 4 (lower is better) Translates to: VPTTCSTNPNQRRQIPPLVAVFS*IAVRHF Trigger: GAAATGCCTTACAGCTATGCAAGAGAATACAGCGAC...GAGGGGTGGTATTTGTCTCCTTTGATTGGGATTGGTAGAGCAAGTGGTGGGGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103141.4 |
||
| CDS-3UTR CCA 90 bp | ACCAGTCAACCTTACACGCTCTACTCAGCCAACCTCTCTTCCCTCCATTTTCTTCATCTTCGTCTTCATTaGCTGGGGCTTCTCTACTGT | + |
|
Preference number: 4 (lower is better) Translates to: TSQPYTLYSANLSSLHFLHLRLH*LGLLYC Trigger: ACAGTAGAGAAGCCCCAGCCAATGAAGACGAAGATG...AAGAAAATGGAGGGAAGAGAGGTTGGCTGAGTAGAGCGTGTAAGGTTGACTGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103141.4 |
||
| CDS-3UTR TCA 90 bp | AGAAGGAAAATGCTAACATACCGGGAATTTGGGATTCCTGGCTCTGGCAGAAATAGGAGGTTACCTTTCTaGGTAAAAGATGCCCCGCAC | + |
|
Preference number: 4 (lower is better) Translates to: RRKMLTYREFGIPGSGRNRRLPF*VKDAPH Trigger: GTGCGGGGCATCTTTTACTCAGAAAGGTAACCTCCT...ATTTCTGCCAGAGCCAGGAATCCCAAATTCCCGGTATGTTAGCATTTTCCTTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000103141.4 |
||
| CDS-3UTR GCA 90 bp | TTCCAGTGCTTGTTTATGGAGCATTTTTCCAAGAATCTTGATGTCTTGGTGCCTTCCCACCGGTTGGTCTaGTGTTGTCATAGGGCACGT | + |
|
Preference number: 4 (lower is better) Translates to: FQCLFMEHFSKNLDVLVPSHRLV*CCHRAR Trigger: ACGTGCCCTATGACAACAGCAGACCAACCGGTGGGA...AGGCACCAAGACATCAAGATTCTTGGAAAAATGCTCCATAAACAAGCACTGGAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000103141.4 |
||
| CDS-3UTR CCA 90 bp | TGGGACTGTGGGTTTGAGTTCAGTCTACTGGATAAGGCTACCATCAGCTTTAAATTCGTCTTCATTGGCTaGGGCTTCTCTACTGTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: WDCGFEFSLLDKATISFKFVFIG*GFSTVH Trigger: GTGGACAGTAGAGAAGCCCCAGCCAATGAAGACGAA...TTTAAAGCTGATGGTAGCCTTATCCAGTAGACTGAACTCAAACCCACAGTCCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103141.4 |
||
| CDS-3UTR CCA 90 bp | AGTCAACCTTACACGCTCTACTCAGCCAACCTCTCTTCCCTCCATTTTCTTTCTAGGCAAGATCTTCTCTaGCAGGAGGATCCGTTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: SQPYTLYSANLSSLHFLSRQDLL*QEDPFL Trigger: AAGAAACGGATCCTCCTGCCAGAGAAGATCTTGCCT...AGAAAGAAAATGGAGGGAAGAGAGGTTGGCTGAGTAGAGCGTGTAAGGTTGACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103141.4 |
||
| CDS-3UTR CCA 90 bp | AGAAGGAAAATGCTAACATACCGGGAATTTGGGATTCCTGGCTCTGGCAGAAATTCTAGGAAGAGGACGTaGCAGTGGTCACATCGAAAC | + |
|
Preference number: 4 (lower is better) Translates to: RRKMLTYREFGIPGSGRNSRKRT*QWSHRN Trigger: GTTTCGATGTGACCACTGCCACGTCCTCTTCCTAGA...ATTTCTGCCAGAGCCAGGAATCCCAAATTCCCGGTATGTTAGCATTTTCCTTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103141.4 |
||
| 3UTR CAA 72 bp | TTCACCCTTGTGACCGTAGGTAAAGGAGAAGGGTCCTaGCTCAGGTGGCTTCAGTTTTGTTTGATAGGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: FTLVTVGKGEGS*LRWLQFCLIGS Trigger: ACTTCCTATCAAACAAAACTGAAGCCACCTGAGCAAGGACCCTTCTCCTTTACCTACGGTCACAAGGGTGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103141.4 |
||
| 3UTR CAA 72 bp | CTTGGCAAGCACGGTTGGTGGCCTCGATTCCAGTGCTaGTTTATGGAGCATTTTTCCAAGAATCTTGATGTC | + |
|
Preference number: 4 (lower is better) Translates to: LGKHGWWPRFQC*FMEHFSKNLDV Trigger: GACATCAAGATTCTTGGAAAAATGCTCCATAAACAAGCACTGGAATCGAGGCCACCAACCGTGCTTGCCAAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000103141.4 |
||
| CDS-3UTR TCA 90 bp | AGTCAACCTTACACGCTCTACTCAGCCAACCTCTCTTCCCTCCATTTTCTTTCTGTGTGCAGTTTAATATaGCGGAGGAGGTTACCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: SQPYTLYSANLSSLHFLSVCSLI*RRRLPF Trigger: GAAAGGTAACCTCCTCCGTCATATTAAACTGCACAC...AGAAAGAAAATGGAGGGAAGAGAGGTTGGCTGAGTAGAGCGTGTAAGGTTGACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103141.4 |
||
| 3UTR CAA 72 bp | TCCAATTGGCCGGGAGCTCCAGTAGATGGCTGTCTATaGCTACAAAAGATAATGAACCAGATACTTCTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: SNWPGAPVDGCL*LQKIMNQILLW Trigger: CCAAAGAAGTATCTGGTTCATTATCTTTTGTAGCAATAGACAGCCATCTACTGGAGCTCCCGGCCAATTGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103141.4 |
||
| 3UTR CAA 72 bp | TCTTTTAGAGTTAACCAATTAGTTGCAAATATGAGCTaGGCAAGCACGGTTGGTGGCCTCGATTCCAGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: SFRVNQLVANMS*ASTVGGLDSSA Trigger: AGCACTGGAATCGAGGCCACCAACCGTGCTTGCCAAGCTCATATTTGCAACTAATTGGTTAACTCTAAAAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103141.4 |
||
| CDS-3UTR TCA 90 bp | AACCTGTGGCTATTGAATAATCATGTATCAAAGCCAGAAGTGACCATCAAGAGGTCACCGATGAATTTCTaGGGCATCGAGCTTTTTCGC | + |
|
Preference number: 4 (lower is better) Translates to: NLWLLNNHVSKPEVTIKRSPMNF*GIELFR Trigger: GCGAAAAAGCTCGATGCCTCAGAAATTCATCGGTGA...CCTCTTGATGGTCACTTCTGGCTTTGATACATGATTATTCAATAGCCACAGGTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000103141.4 |
||
| 3UTR CAA 72 bp | TCCAGTGCTTGTTTATGGAGCATTTTTCCAAGAATCTaGATGTCTTGGTGCCTGTGTGACAAAGGTGACTAC | + |
|
Preference number: 4 (lower is better) Translates to: SSACLWSIFPRI*MSWCLCDKGDY Trigger: GTAGTCACCTTTGTCACACAGGCACCAAGACATCAAGATTCTTGGAAAAATGCTCCATAAACAAGCACTGGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000103141.4 |
||
| CDS-3UTR TCA 90 bp | TCAAAGCCAGAAGTGACCATCAAGAGGGTTTGGATGCTACTCTTATTTTATGGTACCCCATGTGGATGGTaGACATCACATAATCTAGGA | + |
|
Preference number: 4 (lower is better) Translates to: SKPEVTIKRVWMLLLFYGTPCGW*TSHNLG Trigger: TCCTAGATTATGTGATGTTCACCATCCACATGGGGT...ACCATAAAATAAGAGTAGCATCCAAACCCTCTTGATGGTCACTTCTGGCTTTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103141.4 |
||
| CDS-3UTR CCA 90 bp | AACCTGTGGCTATTGAATAATCATGTATCAAAGCCAGAAGTGACCATCAAGAGGCTATCTCATGAGGTTTaGGCAAGCTGTAGTCATTCA | + |
|
Preference number: 4 (lower is better) Translates to: NLWLLNNHVSKPEVTIKRLSHEV*ASCSHS Trigger: TGAATGACTACAGCTTGCCCAAACCTCATGAGATAG...CCTCTTGATGGTCACTTCTGGCTTTGATACATGATTATTCAATAGCCACAGGTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103141.4 |
||
| CDS GCA 90 bp | GGACCACGTGGCTTTGCTGGTAGAGATGTTGGCGATCCTCGTGGTTaGTGTCGGTGTCTGTGGAGTCCTGGGCACTGTTATTGGGGGACA | + |
|
Preference number: 5 (lower is better) Translates to: GPRGFAGRDVGDPRG*CRCLWSPGHCYWGT Trigger: TGTCCCCCAATAACAGTGCCCAGGACTCCACAGACACCGACAGCAACCACGAGGATCGCCAACATCTCTACCAGCAAAGCCACGTGGTCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000103141.4 |
||
| CDS-3UTR CAA 90 bp | GCAGGTCCTTACTGTACGGCCACCTCTTCCTTGCTGTTAGAACGTGAAGGGAGGTGGCGATCCTCGTGGTaGCTGTCGGTGTCTGTGGAG | + |
|
Preference number: 5 (lower is better) Translates to: AGPYCTATSSLLLEREGRWRSSW*LSVSVE Trigger: CTCCACAGACACCGACAGCAACCACGAGGATCGCCA...CCTCCCTTCACGTTCTAACAGCAAGGAAGAGGTGGCCGTACAGTAAGGACCTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103141.4 |
||
| CDS TCA 90 bp | CTAATCTGTCCAGGACGAGAGCTCTCTCACTTCCCATCTCGGCTTTaGTGTGTCTTGCCTCCACACTTGCAGCGTCCCCCAGGTCAGGGT | + |
|
Preference number: 5 (lower is better) Translates to: LICPGRELSHFPSRL*CVLPPHLQRPPGQG Trigger: ACCCTGACCTGGGGGACGCTGCAAGTGTGGAGGCAAGACACATCAAAGCCGAGATGGGAAGTGAGAGAGCTCTCGTCCTGGACAGATTAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000103141.4 |
||
| CDS GCA 90 bp | TCTCTCACTTCCCATCTCGGCTTTGATGTGTCTTGCCTCCACACTTaGAGCGTCCCCCAGGTCAGGGTTCTGAAGAAAAGCTCGGCAGCG | + |
|
Preference number: 5 (lower is better) Translates to: SLTSHLGFDVSCLHT*SVPQVRVLKKSSAA Trigger: CGCTGCCGAGCTTTTCTTCAGAACCCTGACCTGGGGGACGCTGCAAGTGTGGAGGCAAGACACATCAAAGCCGAGATGGGAAGTGAGAGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000103141.4 |
||
| CDS GCA 90 bp | CAGGACGAGAGCTCTCTCACTTCCCATCTCGGCTTTGATGTGTCTTaGCTCCACACTTGCAGCGTCCCCCAGGTCAGGGTTCTGAAGAAA | + |
|
Preference number: 5 (lower is better) Translates to: QDESSLTSHLGFDVS*LHTCSVPQVRVLKK Trigger: TTTCTTCAGAACCCTGACCTGGGGGACGCTGCAAGTGTGGAGGCAAGACACATCAAAGCCGAGATGGGAAGTGAGAGAGCTCTCGTCCTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000103141.4 |
||
| CDS-3UTR CAA 90 bp | ACCAGTCAACCTTACACGCTCTACTCAGCCAACCTCTCTTCCCTCCATTTTCTTGCTCGGCAGCGTTCCTaGTGCTCCTCCAGGGAGCTT | + |
|
Preference number: 5 (lower is better) Translates to: TSQPYTLYSANLSSLHFLARQRS*CSSREL Trigger: AAGCTCCCTGGAGGAGCACAAGGAACGCTGCCGAGC...AAGAAAATGGAGGGAAGAGAGGTTGGCTGAGTAGAGCGTGTAAGGTTGACTGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103141.4 |
||
| CDS CCA 90 bp | TGGCTGGGGCTTCTCTACTGTCCACGTTTTCTATCTCATGAGGTTTaGGCAAGCTGTAGTCATTCAGAGCGTCTGGGCTCTCTGTGGGCA | + |
|
Preference number: 5 (lower is better) Translates to: WLGLLYCPRFLSHEV*ASCSHSERLGSLWA Trigger: TGCCCACAGAGAGCCCAGACGCTCTGAATGACTACAGCTTGCCCAAACCTCATGAGATAGAAAACGTGGACAGTAGAGAAGCCCCAGCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103141.4 |
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| CDS-3UTR CAA 90 bp | ACCAGTCAACCTTACACGCTCTACTCAGCCAACCTCTCTTCCCTCCATTTTCTTGGCGTTATTGATGGCTaGGTCCATCATCCGGGTCTG | + |
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Preference number: 5 (lower is better) Translates to: TSQPYTLYSANLSSLHFLGVIDG*VHHPGL Trigger: CAGACCCGGATGATGGACCAAGCCATCAATAACGCC...AAGAAAATGGAGGGAAGAGAGGTTGGCTGAGTAGAGCGTGTAAGGTTGACTGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103141.4 |
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| CDS-3UTR CAA 90 bp | CTTCCATTACTATCAGCAGGTCCTTACTGTACGGCCACCTCTTCCTTGCTGTTACCGCAGAACTCACACTaGTACGGCTTCTCCACAGAA | + |
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Preference number: 5 (lower is better) Translates to: LPLLSAGPYCTATSSLLLPQNSH*YGFSTE Trigger: TTCTGTGGAGAAGCCGTACAAGTGTGAGTTCTGCGG...TAACAGCAAGGAAGAGGTGGCCGTACAGTAAGGACCTGCTGATAGTAATGGAAG 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103141.4 |
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| CDS-3UTR CAA 90 bp | AGTGCTTGTTTATGGAGCATTTTTCCAAGAATCTTGATGTCTTGGTGCCTGTGTGTCTTGCCTCCACACTaGCAGCGTCCCCCAGGTCAG | + |
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Preference number: 5 (lower is better) Translates to: SACLWSIFPRILMSWCLCVLPPH*QRPPGQ Trigger: CTGACCTGGGGGACGCTGCAAGTGTGGAGGCAAGAC...ACACAGGCACCAAGACATCAAGATTCTTGGAAAAATGCTCCATAAACAAGCACT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000103141.4 |
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| CDS-3UTR CAA 90 bp | TGGGACTGTGGGTTTGAGTTCAGTCTACTGGATAAGGCTACCATCAGCTTTAAATCCTGGGCACTGTTATaGGGGGACAGACCTCGTTCA | + |
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Preference number: 5 (lower is better) Translates to: WDCGFEFSLLDKATISFKSWALL*GDRPRS Trigger: TGAACGAGGTCTGTCCCCCAATAACAGTGCCCAGGA...TTTAAAGCTGATGGTAGCCTTATCCAGTAGACTGAACTCAAACCCACAGTCCCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000103141.4 |
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| CDS GCA 90 bp | GTCGCTGTATTCTCTTGCATAGCTGTAAGGCATTTCACTCTCTTCTaGATCTCCCATGGGCTCCGGCTTCATAATGTTCTCATCTCTGTC | + |
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Preference number: 5 (lower is better) Translates to: VAVFSCIAVRHFTLF*ISHGLRLHNVLISV Trigger: GACAGAGATGAGAACATTATGAAGCCGGAGCCCATGGGAGATGCAGAAGAGAGTGAAATGCCTTACAGCTATGCAAGAGAATACAGCGAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103141.4 |
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| CDS-3UTR CAA 90 bp | AAGTGGGTTGATGCTCCAAGAATAGGGTCTTCCATTACTATCAGCAGGTCCTTACTTCCCATCTCGGCTTaGATGTGTCTTGCCTCCACA | + |
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Preference number: 5 (lower is better) Translates to: KWVDAPRIGSSITISRSLLPISA*MCLAST Trigger: TGTGGAGGCAAGACACATCAAAGCCGAGATGGGAAG...TAAGGACCTGCTGATAGTAATGGAAGACCCTATTCTTGGAGCATCAACCCACTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103141.4 |
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| CDS-3UTR CAA 90 bp | TTCCAGTGCTTGTTTATGGAGCATTTTTCCAAGAATCTTGATGTCTTGGTGCCTGAGGACCACGTGGCTTaGCTGGTAGAGATGTTGGCG | + |
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Preference number: 5 (lower is better) Translates to: FQCLFMEHFSKNLDVLVPEDHVA*LVEMLA Trigger: CGCCAACATCTCTACCAGCAAAGCCACGTGGTCCTC...AGGCACCAAGACATCAAGATTCTTGGAAAAATGCTCCATAAACAAGCACTGGAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000103141.4 |
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| CDS-3UTR CAA 90 bp | AGTGCTTGTTTATGGAGCATTTTTCCAAGAATCTTGATGTCTTGGTGCCTGTGTGAGCGCATCTCTCCTTaGGCATGCGTAGTTGCAGAG | + |
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Preference number: 5 (lower is better) Translates to: SACLWSIFPRILMSWCLCERISP*ACVVAE Trigger: CTCTGCAACTACGCATGCCAAAGGAGAGATGCGCTC...ACACAGGCACCAAGACATCAAGATTCTTGGAAAAATGCTCCATAAACAAGCACT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000103141.4 |
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| CDS-3UTR CAA 90 bp | TTCCAGTGCTTGTTTATGGAGCATTTTTCCAAGAATCTTGATGTCTTGGTGCCTCAGATGGGAGGGGGCTaGAGGAGTTCAAAAGAGCGA | + |
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Preference number: 5 (lower is better) Translates to: FQCLFMEHFSKNLDVLVPQMGGG*RSSKER Trigger: TCGCTCTTTTGAACTCCTCAAGCCCCCTCCCATCTG...AGGCACCAAGACATCAAGATTCTTGGAAAAATGCTCCATAAACAAGCACTGGAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000103141.4 |
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| CDS-3UTR CAA 90 bp | CTTCCATTACTATCAGCAGGTCCTTACTGTACGGCCACCTCTTCCTTGCTGTTAAGTCGCTGTATTCTCTaGCATAGCTGTAAGGCATTT | + |
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Preference number: 5 (lower is better) Translates to: LPLLSAGPYCTATSSLLLSRCIL*HSCKAF Trigger: AAATGCCTTACAGCTATGCAAGAGAATACAGCGACT...TAACAGCAAGGAAGAGGTGGCCGTACAGTAAGGACCTGCTGATAGTAATGGAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103141.4 |
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| CDS-3UTR CAA 90 bp | AAGTGGGTTGATGCTCCAAGAATAGGGTCTTCCATTACTATCAGCAGGTCCTTATTTCGCTTAGCCACATaGCTTGCTAATCTGTCCAGG | + |
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Preference number: 5 (lower is better) Translates to: KWVDAPRIGSSITISRSLFRLAT*LANLSR Trigger: CCTGGACAGATTAGCAAGCAATGTGGCTAAGCGAAA...TAAGGACCTGCTGATAGTAATGGAAGACCCTATTCTTGGAGCATCAACCCACTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103141.4 |
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| CDS-3UTR CAA 90 bp | AGAAGGAAAATGCTAACATACCGGGAATTTGGGATTCCTGGCTCTGGCAGAAATTCTTTGTTGATCACTTaGATGGAGTCCCTCAGGCAG | + |
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Preference number: 5 (lower is better) Translates to: RRKMLTYREFGIPGSGRNSLLIT*MESLRQ Trigger: CTGCCTGAGGGACTCCATCAAAGTGATCAACAAAGA...ATTTCTGCCAGAGCCAGGAATCCCAAATTCCCGGTATGTTAGCATTTTCCTTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103141.4 |
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| CDS CCA 90 bp | CATCTTTCACTTTCATCGAATCTTCTCCTGCATCTTCGTCTTCATTaGCTGGGGCTTCTCTACTGTCCACGTTTTCTATCTCATGAGGTT | + |
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Preference number: 5 (lower is better) Translates to: HLSLSSNLLLHLRLH*LGLLYCPRFLSHEV Trigger: AACCTCATGAGATAGAAAACGTGGACAGTAGAGAAGCCCCAGCCAATGAAGACGAAGATGCAGGAGAAGATTCGATGAAAGTGAAAGATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103141.4 |
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| CDS-3UTR CAA 90 bp | AACCTGTGGCTATTGAATAATCATGTATCAAAGCCAGAAGTGACCATCAAGAGGACCTCCCCTTCTTTGTaGATCACTTTGATGGAGTCC | + |
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Preference number: 5 (lower is better) Translates to: NLWLLNNHVSKPEVTIKRTSPSL*ITLMES Trigger: GGACTCCATCAAAGTGATCAACAAAGAAGGGGAGGT...CCTCTTGATGGTCACTTCTGGCTTTGATACATGATTATTCAATAGCCACAGGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103141.4 |
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| CDS CAA 72 bp | AAAGAGCGAGGGACCTCCTTCAGAAGAGGCATCCCATaGCGGGCCTGGGGGAGGACCACGTGGCTTTGCTGG | + |
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Preference number: 6 (lower is better) Translates to: KERGTSFRRGIP*RAWGRTTWLCW Trigger: CCAGCAAAGCCACGTGGTCCTCCCCCAGGCCCGCAATGGGATGCCTCTTCTGAAGGAGGTCCCTCGCTCTTT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000103141.4 |
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| CDS CAA 90 bp | CAGAAGAGGCATCCCATTGCGGGCCTGGGGGAGGACCACGTGGCTTaGCTGGTAGAGATGTTGGCGATCCTCGTGGTTGCTGTCGGTGTC | + |
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Preference number: 6 (lower is better) Translates to: QKRHPIAGLGEDHVA*LVEMLAILVVAVGV Trigger: GACACCGACAGCAACCACGAGGATCGCCAACATCTCTACCAGCAAAGCCACGTGGTCCTCCCCCAGGCCCGCAATGGGATGCCTCTTCTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000103141.4 |
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| CDS CAA 72 bp | CATCCCATTGCGGGCCTGGGGGAGGACCACGTGGCTTaGCTGGTAGAGATGTTGGCGATCCTCGTGGTTGCT | + |
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Preference number: 6 (lower is better) Translates to: HPIAGLGEDHVA*LVEMLAILVVA Trigger: AGCAACCACGAGGATCGCCAACATCTCTACCAGCAAAGCCACGTGGTCCTCCCCCAGGCCCGCAATGGGATG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000103141.4 |
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| CDS TCA 72 bp | CCAGGACGAGAGCTCTCTCACTTCCCATCTCGGCTTTaGTGTGTCTTGCCTCCACACTTGCAGCGTCCCCCA | + |
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Preference number: 6 (lower is better) Translates to: PGRELSHFPSRL*CVLPPHLQRPP Trigger: TGGGGGACGCTGCAAGTGTGGAGGCAAGACACATCAAAGCCGAGATGGGAAGTGAGAGAGCTCTCGTCCTGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000103141.4 |
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| CDS CCA 72 bp | ATGAGGTTTGGGCAAGCTGTAGTCATTCAGAGCGTCTaGGCTCTCTGTGGGCAGAGGCTGCTCCTCCGTGCT | + |
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Preference number: 6 (lower is better) Translates to: MRFGQAVVIQSV*ALCGQRLLLRA Trigger: AGCACGGAGGAGCAGCCTCTGCCCACAGAGAGCCCAGACGCTCTGAATGACTACAGCTTGCCCAAACCTCAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103141.4 |
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| CDS CCA 72 bp | CCGAGTAAGTGCTATGGGGTACACACTGCTGATGACTaGGACCATCTCAGAGGTGGGAGCAGGCGGAGTCTG | + |
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Preference number: 6 (lower is better) Translates to: PSKCYGVHTADD*DHLRGGSRRSL Trigger: CAGACTCCGCCTGCTCCCACCTCTGAGATGGTCCCAGTCATCAGCAGTGTGTACCCCATAGCACTTACTCGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103141.4 |
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| CDS GCA 72 bp | AGCTCTCTCACTTCCCATCTCGGCTTTGATGTGTCTTaGCTCCACACTTGCAGCGTCCCCCAGGTCAGGGTT | + |
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Preference number: 6 (lower is better) Translates to: SSLTSHLGFDVS*LHTCSVPQVRV Trigger: AACCCTGACCTGGGGGACGCTGCAAGTGTGGAGGCAAGACACATCAAAGCCGAGATGGGAAGTGAGAGAGCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000103141.4 |
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| CDS GCA 72 bp | TCCCATCTCGGCTTTGATGTGTCTTGCCTCCACACTTaGAGCGTCCCCCAGGTCAGGGTTCTGAAGAAAAGC | + |
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Preference number: 6 (lower is better) Translates to: SHLGFDVSCLHT*SVPQVRVLKKS Trigger: GCTTTTCTTCAGAACCCTGACCTGGGGGACGCTGCAAGTGTGGAGGCAAGACACATCAAAGCCGAGATGGGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000103141.4 |
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| CDS GCA 72 bp | GGCTTTGCTGGTAGAGATGTTGGCGATCCTCGTGGTTaGTGTCGGTGTCTGTGGAGTCCTGGGCACTGTTAT | + |
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Preference number: 6 (lower is better) Translates to: GFAGRDVGDPRG*CRCLWSPGHCY Trigger: ATAACAGTGCCCAGGACTCCACAGACACCGACAGCAACCACGAGGATCGCCAACATCTCTACCAGCAAAGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103141.4 |
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| CDS CAA 72 bp | ATAACCCGCACACGTCGCAGTTCATCTTCCCACCGGTaGGTCTGCTGTTGTCATAGGGCACGTGTCTCTCCA | + |
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Preference number: 6 (lower is better) Translates to: ITRTRRSSSSHR*VCCCHRARVSP Trigger: TGGAGAGACACGTGCCCTATGACAACAGCAGACCAACCGGTGGGAAGATGAACTGCGACGTGTGCGGGTTAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103141.4 |
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| CDS CCA 72 bp | TGCTGTCGGTGTCTGTGGAGTCCTGGGCACTGTTATTaGGGGACAGACCTCGTTCAGAAGGCAAGATCTTCT | + |
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Preference number: 6 (lower is better) Translates to: CCRCLWSPGHCY*GTDLVQKARSS Trigger: AGAAGATCTTGCCTTCTGAACGAGGTCTGTCCCCCAATAACAGTGCCCAGGACTCCACAGACACCGACAGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103141.4 |
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| CDS CAA 90 bp | TGGCAGTGGTCACATCGAAACACATCCATCACCTCCCCTTCTTTGTaGATCACTTTGATGGAGTCCCTCAGGCAGATGGGAGGGGGCTTG | + |
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Preference number: 6 (lower is better) Translates to: WQWSHRNTSITSPSL*ITLMESLRQMGGGL Trigger: CAAGCCCCCTCCCATCTGCCTGAGGGACTCCATCAAAGTGATCAACAAAGAAGGGGAGGTGATGGATGTGTTTCGATGTGACCACTGCCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000103141.4 |
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| CDS CAA 90 bp | TCACATCGAAACACATCCATCACCTCCCCTTCTTTGTTGATCACTTaGATGGAGTCCCTCAGGCAGATGGGAGGGGGCTTGAGGAGTTCA | + |
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Preference number: 6 (lower is better) Translates to: SHRNTSITSPSLLIT*MESLRQMGGGLRSS Trigger: TGAACTCCTCAAGCCCCCTCCCATCTGCCTGAGGGACTCCATCAAAGTGATCAACAAAGAAGGGGAGGTGATGGATGTGTTTCGATGTGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000103141.4 |
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| CDS TCA 72 bp | CACTGGAACGGGCGTTCGCCGGTATGGCTTCGCTTATaGACCATCAAGACGTTGAAGCTAATGCAGGATAAC | + |
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Preference number: 6 (lower is better) Translates to: HWNGRSPVWLRL*TIKTLKLMQDN Trigger: GTTATCCTGCATTAGCTTCAACGTCTTGATGGTTCATAAGCGAAGCCATACCGGCGAACGCCCGTTCCAGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103141.4 |
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| CDS TCA 72 bp | GCATCGAAGCAGTGCCGCTTCTCACCGATGAATTTCTaGGGCATCGAGCTTTTTCGCTTAGCCACATTGCTT | + |
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Preference number: 6 (lower is better) Translates to: ASKQCRFSPMNF*GIELFRLATLL Trigger: AAGCAATGTGGCTAAGCGAAAAAGCTCGATGCCTCAGAAATTCATCGGTGAGAAGCGGCACTGCTTCGATGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000103141.4 |
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| CDS CCA 72 bp | CTTCTCTACTGTCCACGTTTTCTATCTCATGAGGTTTaGGCAAGCTGTAGTCATTCAGAGCGTCTGGGCTCT | + |
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Preference number: 6 (lower is better) Translates to: LLYCPRFLSHEV*ASCSHSERLGS Trigger: AGAGCCCAGACGCTCTGAATGACTACAGCTTGCCCAAACCTCATGAGATAGAAAACGTGGACAGTAGAGAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103141.4 |
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| CDS CAA 72 bp | TCACATCGAAACACATCCATCACCTCCCCTTCTTTGTaGATCACTTTGATGGAGTCCCTCAGGCAGATGGGA | + |
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Preference number: 6 (lower is better) Translates to: SHRNTSITSPSL*ITLMESLRQMG Trigger: TCCCATCTGCCTGAGGGACTCCATCAAAGTGATCAACAAAGAAGGGGAGGTGATGGATGTGTTTCGATGTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103141.4 |
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| CDS GCA 72 bp | TTCTCTTGCATAGCTGTAAGGCATTTCACTCTCTTCTaGATCTCCCATGGGCTCCGGCTTCATAATGTTCTC | + |
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Preference number: 6 (lower is better) Translates to: FSCIAVRHFTLF*ISHGLRLHNVL Trigger: GAGAACATTATGAAGCCGGAGCCCATGGGAGATGCAGAAGAGAGTGAAATGCCTTACAGCTATGCAAGAGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103141.4 |
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| CDS CCA 72 bp | CTTTCATCGAATCTTCTCCTGCATCTTCGTCTTCATTaGCTGGGGCTTCTCTACTGTCCACGTTTTCTATCT | + |
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Preference number: 6 (lower is better) Translates to: LSSNLLLHLRLH*LGLLYCPRFLS Trigger: AGATAGAAAACGTGGACAGTAGAGAAGCCCCAGCCAATGAAGACGAAGATGCAGGAGAAGATTCGATGAAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103141.4 |
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| CDS CAA 72 bp | ACTTTCATCGAATCTTCTCCTGCATCTTCGTCTTCATaGGCTGGGGCTTCTCTACTGTCCACGTTTTCTATC | + |
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Preference number: 6 (lower is better) Translates to: TFIESSPASSSS*AGASLLSTFSI Trigger: GATAGAAAACGTGGACAGTAGAGAAGCCCCAGCCAATGAAGACGAAGATGCAGGAGAAGATTCGATGAAAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103141.4 |
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| CDS GCA 72 bp | CTCCAGCTTAATGCTTTCATAGTCGCTGTATTCTCTTaGATAGCTGTAAGGCATTTCACTCTCTTCTGCATC | + |
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Preference number: 6 (lower is better) Translates to: LQLNAFIVAVFS*IAVRHFTLFCI Trigger: GATGCAGAAGAGAGTGAAATGCCTTACAGCTATGCAAGAGAATACAGCGACTATGAAAGCATTAAGCTGGAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103141.4 |
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