Pregenerated sensors for IKZF2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000025997Ensembl transcript IDs: ENSMUST00000027146.9, ENSMUST00000187184.7, ENSMUST00000188110.7, ENSMUST00000190016.2, ENSMUST00000190771.7, ENSMUST00000190855.7, ENSMUST00000191262.7
Found 256 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CCAGAAGACAGCATGTCGCCATCCGAGGGAAGGTGGGACTGTAAGTaGAGTATTTCTTCATGTGCAGTTCTTCATAGGGGTCCCCTTTGG | + |
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Preference number: 1 (lower is better) Translates to: PEDSMSPSEGRWDCK*SISSCAVLHRGPLW Trigger: CCAAAGGGGACCCCTATGAAGAACTGCACATGAAGAAATACTGCACTTACAGTCCCACCTTCCCTCGGATGGCGACATGCTGTCTTCTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027146.9 ENSMUST00000187184.7 ENSMUST00000190771.7 |
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| 3UTR GCA 90 bp | AATAGAGCAGGTGCTAGCAGAGAGAAGGAAGAGATAGCAGATGCCTaGAGGTGTTCACAAAGAGCCGAAAGGGACACACTGACAGACATC | + |
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Preference number: 1 (lower is better) Translates to: NRAGASREKEEIADA*RCSQRAERDTLTDI Trigger: GATGTCTGTCAGTGTGTCCCTTTCGGCTCTTTGTGAACACCTGCAGGCATCTGCTATCTCTTCCTTCTCTCTGCTAGCACCTGCTCTATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027146.9 |
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| 3UTR TCA 90 bp | CACGGGACTAGTGTGCTGAGCTTTGTCTTGTTCAAGAGGAGACAATaGTCTGCATTCCCACGCCATTTCACAAAACAACCACAGGTTAGA | + |
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Preference number: 1 (lower is better) Translates to: HGTSVLSFVLFKRRQ*SAFPRHFTKQPQVR Trigger: TCTAACCTGTGGTTGTTTTGTGAAATGGCGTGGGAATGCAGATCATTGTCTCCTCTTGAACAAGACAAAGCTCAGCACACTAGTCCCGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027146.9 |
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| 3UTR TCA 90 bp | ACATCTGAGATGACATTTTGGAGACCAGTCACGGGACTAGTGTGCTaGGCTTTGTCTTGTTCAAGAGGAGACAATGATCTGCATTCCCAC | + |
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Preference number: 1 (lower is better) Translates to: TSEMTFWRPVTGLVC*ALSCSRGDNDLHSH Trigger: GTGGGAATGCAGATCATTGTCTCCTCTTGAACAAGACAAAGCTCAGCACACTAGTCCCGTGACTGGTCTCCAAAATGTCATCTCAGATGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027146.9 |
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| 3UTR TCA 90 bp | GCAGAGCAAATGACATTTTGTCCACAAAATAAGAATTATAGACAGTaGCAGCATCCAGAAGACAGCATGTCGCCATCCGAGGGAAGGTGG | + |
|
Preference number: 1 (lower is better) Translates to: AEQMTFCPQNKNYRQ*QHPEDSMSPSEGRW Trigger: CCACCTTCCCTCGGATGGCGACATGCTGTCTTCTGGATGCTGTCACTGTCTATAATTCTTATTTTGTGGACAAAATGTCATTTGCTCTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027146.9 ENSMUST00000187184.7 ENSMUST00000190771.7 |
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| 3UTR TCA 90 bp | TTGTCATTTAGGAGAGAAGATGAAGGTTTGGAAAGACCAAACTTGTaGGGTGTGCAACTGGGTCAGAGAAGCACAAACACAAGCCAAGGT | + |
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Preference number: 1 (lower is better) Translates to: LSFRREDEGLERPNL*GVQLGQRSTNTSQG Trigger: ACCTTGGCTTGTGTTTGTGCTTCTCTGACCCAGTTGCACACCTCACAAGTTTGGTCTTTCCAAACCTTCATCTTCTCTCCTAAATGACAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027146.9 |
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| 3UTR TCA 90 bp | CCAAACAAATCAAAATCCAAGCACAAAGGAGCCAGACGGATACTCTaGTTACAGAATTTCTGGAGTCACGTTAGGTGCCTCCTACTTGAG | + |
|
Preference number: 1 (lower is better) Translates to: PNKSKSKHKGARRIL*LQNFWSHVRCLLLE Trigger: CTCAAGTAGGAGGCACCTAACGTGACTCCAGAAATTCTGTAATCAGAGTATCCGTCTGGCTCCTTTGTGCTTGGATTTTGATTTGTTTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027146.9 |
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| 3UTR GCA 90 bp | TATGGTCAGGTTTGTTTTCCTCAAACACAAGCAGCAAGTTATGTCTaGCAAGTTGATTCCCCCGAATGCCTTGATAACAGTGTGCTCCAA | + |
|
Preference number: 1 (lower is better) Translates to: YGQVCFPQTQAASYV*QVDSPECLDNSVLQ Trigger: TTGGAGCACACTGTTATCAAGGCATTCGGGGGAATCAACTTGGCAGACATAACTTGCTGCTTGTGTTTGAGGAAAACAAACCTGACCATA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027146.9 |
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| 3UTR GCA 90 bp | TTAGGAGAGAAGATGAAGGTTTGGAAAGACCAAACTTGTGAGGTGTaGAACTGGGTCAGAGAAGCACAAACACAAGCCAAGGTTGCTAAA | + |
|
Preference number: 1 (lower is better) Translates to: LGEKMKVWKDQTCEV*NWVREAQTQAKVAK Trigger: TTTAGCAACCTTGGCTTGTGTTTGTGCTTCTCTGACCCAGTTGCACACCTCACAAGTTTGGTCTTTCCAAACCTTCATCTTCTCTCCTAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027146.9 |
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| 3UTR CCA 90 bp | GAGAAGATGAAGGTTTGGAAAGACCAAACTTGTGAGGTGTGCAACTaGGTCAGAGAAGCACAAACACAAGCCAAGGTTGCTAAATTACTT | + |
|
Preference number: 1 (lower is better) Translates to: EKMKVWKDQTCEVCN*VREAQTQAKVAKLL Trigger: AAGTAATTTAGCAACCTTGGCTTGTGTTTGTGCTTCTCTGACCCAGTTGCACACCTCACAAGTTTGGTCTTTCCAAACCTTCATCTTCTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027146.9 |
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| 3UTR CCA 90 bp | AATCTTTCTACCCTAACTTGTCATTTAGGAGAGAAGATGAAGGTTTaGAAAGACCAAACTTGTGAGGTGTGCAACTGGGTCAGAGAAGCA | + |
|
Preference number: 1 (lower is better) Translates to: NLSTLTCHLGEKMKV*KDQTCEVCNWVREA Trigger: TGCTTCTCTGACCCAGTTGCACACCTCACAAGTTTGGTCTTTCCAAACCTTCATCTTCTCTCCTAAATGACAAGTTAGGGTAGAAAGATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027146.9 |
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| 3UTR TCA 90 bp | AGCAGCGATGTGTTACCACACAGCAGACCTCTCAGCATTTACAAATaGCTGTCAAATAATCCAGTTATGGTCAGGTTTGTTTTCCTCAAA | + |
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Preference number: 1 (lower is better) Translates to: SSDVLPHSRPLSIYK*LSNNPVMVRFVFLK Trigger: TTTGAGGAAAACAAACCTGACCATAACTGGATTATTTGACAGTCATTTGTAAATGCTGAGAGGTCTGCTGTGTGGTAACACATCGCTGCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027146.9 |
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| 3UTR CCA 90 bp | GCCTTCTATCACAATCCTGAATATGAATGGCAGATCAGAATCTCTTaGATGAACCTCTATGAACTGAATGATCTCCTAAATTATGATAGG | + |
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Preference number: 1 (lower is better) Translates to: AFYHNPEYEWQIRIS*MNLYELNDLLNYDR Trigger: CCTATCATAATTTAGGAGATCATTCAGTTCATAGAGGTTCATCCAAGAGATTCTGATCTGCCATTCATATTCAGGATTGTGATAGAAGGC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027146.9 ENSMUST00000190771.7 |
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| 3UTR CCA 90 bp | GGGAGAAAGTTAAGACTCTTTGCTTTACATTTTTATCCTCTATGGTaGGGGGAAAGTCTACTCTTGTATGATTTGTATTTAAGAAGAAAG | + |
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Preference number: 1 (lower is better) Translates to: GRKLRLFALHFYPLW*GESLLLYDLYLRRK Trigger: CTTTCTTCTTAAATACAAATCATACAAGAGTAGACTTTCCCCCCACCATAGAGGATAAAAATGTAAAGCAAAGAGTCTTAACTTTCTCCC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000027146.9 |
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| 3UTR-3UTR CCA 90 bp | GCCAAGCATCCTACCCAGAAAACTCTCAACTTTCCTGCCTTCTATCACAATCCTCCATCCGAGGGAAGGTaGGACTGTAAGTGCAGTATT | + |
|
Preference number: 2 (lower is better) Translates to: AKHPTQKTLNFPAFYHNPPSEGR*DCKCSI Trigger: AATACTGCACTTACAGTCCCACCTTCCCTCGGATGG...AGGATTGTGATAGAAGGCAGGAAAGTTGAGAGTTTTCTGGGTAGGATGCTTGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027146.9 ENSMUST00000190771.7 |
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| 3UTR CAA 90 bp | AGGTTTGTTTTCCTCAAACACAAGCAGCAAGTTATGTCTGCCAAGTaGATTCCCCCGAATGCCTTGATAACAGTGTGCTCCAATCCTACC | + |
|
Preference number: 2 (lower is better) Translates to: RFVFLKHKQQVMSAK*IPPNALITVCSNPT Trigger: GGTAGGATTGGAGCACACTGTTATCAAGGCATTCGGGGGAATCAACTTGGCAGACATAACTTGCTGCTTGTGTTTGAGGAAAACAAACCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027146.9 |
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| 3UTR CAA 90 bp | CTCAGACAGCACTATGTCCACAAAGTTTATCGTAACCCACAAATCTaGAATTCAGCTTGTCCCCATTTGTCCCTGTCACAGCAGAGCTAT | + |
|
Preference number: 2 (lower is better) Translates to: LRQHYVHKVYRNPQI*NSACPHLSLSQQSY Trigger: ATAGCTCTGCTGTGACAGGGACAAATGGGGACAAGCTGAATTCAAGATTTGTGGGTTACGATAAACTTTGTGGACATAGTGCTGTCTGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027146.9 |
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| 3UTR CAA 90 bp | CTCCTTGTCCTCTCCAGCCTCTTCCATGAATCTTTCTACCCTAACTaGTCATTTAGGAGAGAAGATGAAGGTTTGGAAAGACCAAACTTG | + |
|
Preference number: 2 (lower is better) Translates to: LLVLSSLFHESFYPN*SFRREDEGLERPNL Trigger: CAAGTTTGGTCTTTCCAAACCTTCATCTTCTCTCCTAAATGACAAGTTAGGGTAGAAAGATTCATGGAAGAGGCTGGAGAGGACAAGGAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027146.9 |
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| 3UTR-3UTR TCA 90 bp | GAGTACATCAGGTTTTCCAATAAAATGGGATCAGAAAGGCAGAGCACATCGGTAGATGCATGGCTGCAATaGACTGCTTTAAATGCTCAC | + |
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Preference number: 2 (lower is better) Translates to: EYIRFSNKMGSERQSTSVDAWLQ*TALNAH Trigger: GTGAGCATTTAAAGCAGTTCATTGCAGCCATGCATC...TACCGATGTGCTCTGCCTTTCTGATCCCATTTTATTGGAAAACCTGATGTACTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027146.9 |
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| 3UTR-3UTR TCA 90 bp | ATATGCATGTGCATGCAAACTGTACTGCATTCAAACACTGACCTGTATGTATGCCTTCCTGGAAATTACTaGCTGCCTCTTACCCACTCT | + |
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Preference number: 2 (lower is better) Translates to: ICMCMQTVLHSNTDLYVCLPGNY*LPLTHS Trigger: AGAGTGGGTAAGAGGCAGTCAGTAATTTCCAGGAAG...GCATACATACAGGTCAGTGTTTGAATGCAGTACAGTTTGCATGCACATGCATAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027146.9 |
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| 3UTR-3UTR CCA 90 bp | GAGTACATCAGGTTTTCCAATAAAATGGGATCAGAAAGGCAGAGCACATCGGTAAGAGTCAAAGAGGAATaGACTGTGGACAGAACACTG | + |
|
Preference number: 2 (lower is better) Translates to: EYIRFSNKMGSERQSTSVRVKEE*TVDRTL Trigger: CAGTGTTCTGTCCACAGTCCATTCCTCTTTGACTCT...TACCGATGTGCTCTGCCTTTCTGATCCCATTTTATTGGAAAACCTGATGTACTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027146.9 |
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| 3UTR-3UTR CCA 90 bp | AATGACTTAGACCATTTTAAATTGCCAAGCATCCTACCCAGAAAACTCTCAACTCCATCCGAGGGAAGGTaGGACTGTAAGTGCAGTATT | + |
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Preference number: 2 (lower is better) Translates to: NDLDHFKLPSILPRKLSTPSEGR*DCKCSI Trigger: AATACTGCACTTACAGTCCCACCTTCCCTCGGATGG...AGTTGAGAGTTTTCTGGGTAGGATGCTTGGCAATTTAAAATGGTCTAAGTCATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027146.9 ENSMUST00000190771.7 |
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| 3UTR-3UTR CCA 90 bp | ATATGCATGTGCATGCAAACTGTACTGCATTCAAACACTGACCTGTATGTATGCAAAGGGTTCTTAGAGTaGGAATTCCCCCTACTGTTC | + |
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Preference number: 2 (lower is better) Translates to: ICMCMQTVLHSNTDLYVCKGFLE*EFPLLF Trigger: GAACAGTAGGGGGAATTCCCACTCTAAGAACCCTTT...GCATACATACAGGTCAGTGTTTGAATGCAGTACAGTTTGCATGCACATGCATAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027146.9 |
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| 3UTR-3UTR CCA 90 bp | ATATGCATGTGCATGCAAACTGTACTGCATTCAAACACTGACCTGTATGTATGCGGACAGAACACTGAGTaGTCACAGCTTGAAGAGAAA | + |
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Preference number: 2 (lower is better) Translates to: ICMCMQTVLHSNTDLYVCGQNTE*SQLEEK Trigger: TTTCTCTTCAAGCTGTGACCACTCAGTGTTCTGTCC...GCATACATACAGGTCAGTGTTTGAATGCAGTACAGTTTGCATGCACATGCATAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027146.9 |
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| 3UTR CAA 90 bp | ATAACCCTTTCACAAAGTATTACAAAGTTTTTGCAGCTTCTTCAGTaGTACACACACACACACACACACACACACACACAAGCACGCACA | + |
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Preference number: 2 (lower is better) Translates to: ITLSQSITKFLQLLQ*YTHTHTHTHTQART Trigger: TGTGCGTGCTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTACAACTGAAGAAGCTGCAAAAACTTTGTAATACTTTGTGAAAGGGTTAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027146.9 |
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| 3UTR-3UTR GCA 90 bp | GCCAAGCATCCTACCCAGAAAACTCTCAACTTTCCTGCCTTCTATCACAATCCTATGAACTGCTTTAAATaGTCACGAAATAAACAAGCC | + |
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Preference number: 2 (lower is better) Translates to: AKHPTQKTLNFPAFYHNPMNCFK*SRNKQA Trigger: GGCTTGTTTATTTCGTGAGCATTTAAAGCAGTTCAT...AGGATTGTGATAGAAGGCAGGAAAGTTGAGAGTTTTCTGGGTAGGATGCTTGGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027146.9 ENSMUST00000190771.7 |
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| 3UTR-3UTR GCA 90 bp | TCAATTATAAATTCCGTAGGGGAGGTAAACACAGAACCCACAACAATTCAACTCAGGTGGGACTGTAAGTaGAGTATTTCTTCATGTGCA | + |
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Preference number: 2 (lower is better) Translates to: SIINSVGEVNTEPTTIQLRWDCK*SISSCA Trigger: TGCACATGAAGAAATACTGCACTTACAGTCCCACCT...GAGTTGAATTGTTGTGGGTTCTGTGTTTACCTCCCCTACGGAATTTATAATTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027146.9 ENSMUST00000190771.7 |
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| 3UTR-3UTR GCA 90 bp | AATCCTGAATATGAATGGCAGATCAGAATCTCTTGGATGAACCTCTATGAACTGATGGCTGCAATGAACTaGTTTAAATGCTCACGAAAT | + |
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Preference number: 2 (lower is better) Translates to: NPEYEWQIRISWMNLYELMAAMN*FKCSRN Trigger: ATTTCGTGAGCATTTAAAGCAGTTCATTGCAGCCAT...CAGTTCATAGAGGTTCATCCAAGAGATTCTGATCTGCCATTCATATTCAGGATT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027146.9 ENSMUST00000190771.7 |
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| 3UTR-3UTR GCA 90 bp | AATGACTTAGACCATTTTAAATTGCCAAGCATCCTACCCAGAAAACTCTCAACTATGGCTGCAATGAACTaGTTTAAATGCTCACGAAAT | + |
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Preference number: 2 (lower is better) Translates to: NDLDHFKLPSILPRKLSTMAAMN*FKCSRN Trigger: ATTTCGTGAGCATTTAAAGCAGTTCATTGCAGCCAT...AGTTGAGAGTTTTCTGGGTAGGATGCTTGGCAATTTAAAATGGTCTAAGTCATT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027146.9 ENSMUST00000190771.7 |
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| 3UTR TCA 72 bp | CCGATGACAGGCAAGCCTGGGGTCTGGAGACCCCTCTaGGCCTGGAACATCACTGCAGAAGTGGGACAGCAC | + |
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Preference number: 3 (lower is better) Translates to: PMTGKPGVWRPL*AWNITAEVGQH Trigger: GTGCTGTCCCACTTCTGCAGTGATGTTCCAGGCTCAGAGGGGTCTCCAGACCCCAGGCTTGCCTGTCATCGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027146.9 |
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| 3UTR TCA 72 bp | CCCAAAGCTGCAAATAACAGGGTCGAAGAGACCCGATaGCAGGCAAGCCTGGGGTCTGGAGACCCCTCTGAG | + |
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Preference number: 3 (lower is better) Translates to: PKAANNRVEETR*QASLGSGDPSE Trigger: CTCAGAGGGGTCTCCAGACCCCAGGCTTGCCTGTCATCGGGTCTCTTCGACCCTGTTATTTGCAGCTTTGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027146.9 |
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| 3UTR CCA 72 bp | ATAACAGGGTCGAAGAGACCCGATGACAGGCAAGCCTaGGGTCTGGAGACCCCTCTGAGCCTGGAACATCAC | + |
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Preference number: 3 (lower is better) Translates to: ITGSKRPDDRQA*GLETPLSLEHH Trigger: GTGATGTTCCAGGCTCAGAGGGGTCTCCAGACCCCAGGCTTGCCTGTCATCGGGTCTCTTCGACCCTGTTAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027146.9 |
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| 3UTR TCA 72 bp | ACGCAAACTCAGAGCTTAGTCGTACCGAAGGGCAAGTaGGTGGTGGACATCCTCTCTGGTGCTCCACTGTCA | + |
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Preference number: 3 (lower is better) Translates to: TQTQSLVVPKGK*VVDILSGAPLS Trigger: TGACAGTGGAGCACCAGAGAGGATGTCCACCACTCACTTGCCCTTCGGTACGACTAAGCTCTGAGTTTGCGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027146.9 |
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| 3UTR TCA 72 bp | ACTAGTAGGAGTGTCAAGAGAGCCACCAAGAGGAAATaGCACCGAGAGGAGGGCCACAGACAGAGTAGGGAT | + |
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Preference number: 3 (lower is better) Translates to: TSRSVKRATKRK*HREEGHRQSRD Trigger: ATCCCTACTCTGTCTGTGGCCCTCCTCTCGGTGTCATTTCCTCTTGGTGGCTCTCTTGACACTCCTACTAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027146.9 |
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| 3UTR GCA 72 bp | GGTACTTCTCCAGTCGTGGTACTTCCCAAGGCAAAGTaGAGTGACATGGTTTGGGCATGTCACTCAAGGGAC | + |
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Preference number: 3 (lower is better) Translates to: GTSPVVVLPKAK*SDMVWACHSRD Trigger: GTCCCTTGAGTGACATGCCCAAACCATGTCACTGCACTTTGCCTTGGGAAGTACCACGACTGGAGAAGTACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027146.9 |
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| 3UTR CCA 72 bp | GTGGTACTTCCCAAGGCAAAGTGCAGTGACATGGTTTaGGCATGTCACTCAAGGGACTGTTGGAGCAGCGAT | + |
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Preference number: 3 (lower is better) Translates to: VVLPKAKCSDMV*ACHSRDCWSSD Trigger: ATCGCTGCTCCAACAGTCCCTTGAGTGACATGCCCAAACCATGTCACTGCACTTTGCCTTGGGAAGTACCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027146.9 |
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| 3UTR CCA 72 bp | CAGTCGTGGTACTTCCCAAGGCAAAGTGCAGTGACATaGTTTGGGCATGTCACTCAAGGGACTGTTGGAGCA | + |
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Preference number: 3 (lower is better) Translates to: QSWYFPRQSAVT*FGHVTQGTVGA Trigger: TGCTCCAACAGTCCCTTGAGTGACATGCCCAAACCATGTCACTGCACTTTGCCTTGGGAAGTACCACGACTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027146.9 |
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| 3UTR CCA 72 bp | GAGCACACTGCTCATCCGTGGGTACTTCTCCAGTCGTaGTACTTCCCAAGGCAAAGTGCAGTGACATGGTTT | + |
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Preference number: 3 (lower is better) Translates to: EHTAHPWVLLQS*YFPRQSAVTWF Trigger: AAACCATGTCACTGCACTTTGCCTTGGGAAGTACCACGACTGGAGAAGTACCCACGGATGAGCAGTGTGCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027146.9 |
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| 3UTR TCA 72 bp | TTCTCCAGTCGTGGTACTTCCCAAGGCAAAGTGCAGTaGCATGGTTTGGGCATGTCACTCAAGGGACTGTTG | + |
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Preference number: 3 (lower is better) Translates to: FSSRGTSQGKVQ*HGLGMSLKGLL Trigger: CAACAGTCCCTTGAGTGACATGCCCAAACCATGTCACTGCACTTTGCCTTGGGAAGTACCACGACTGGAGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027146.9 |
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| 3UTR GCA 72 bp | ACCGAAGGGCAAGTGAGTGGTGGACATCCTCTCTGGTaGTCCACTGTCAAACCGTTTTTAGATCACAGTTCC | + |
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Preference number: 3 (lower is better) Translates to: TEGQVSGGHPLW*STVKPFLDHSS Trigger: GGAACTGTGATCTAAAAACGGTTTGACAGTGGAGCACCAGAGAGGATGTCCACCACTCACTTGCCCTTCGGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027146.9 |
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| 3UTR TCA 72 bp | CCTGCAGGTGTTCACAAAGAGCCGAAAGGGACACACTaGCAGACATCCAGATGCTTCCTCAAGTTGCAGTTA | + |
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Preference number: 3 (lower is better) Translates to: PAGVHKEPKGTH*QTSRCFLKLQL Trigger: TAACTGCAACTTGAGGAAGCATCTGGATGTCTGTCAGTGTGTCCCTTTCGGCTCTTTGTGAACACCTGCAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027146.9 |
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| 3UTR TCA 72 bp | CCCTTAGAAGTGACAGACGACCCCAGACTACACATCTaGGATGACATTTTGGAGACCAGTCACGGGACTAGT | + |
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Preference number: 3 (lower is better) Translates to: PLEVTDDPRLHI*DDILETSHGTS Trigger: ACTAGTCCCGTGACTGGTCTCCAAAATGTCATCTCAGATGTGTAGTCTGGGGTCGTCTGTCACTTCTAAGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027146.9 |
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| 3UTR TCA 72 bp | CCGGGCTTTCCTTACTACATGTCACTTGAGGTAAACTaGAGGCCCGGTTCACTGAGAACTGCTTATGTGGAC | + |
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Preference number: 3 (lower is better) Translates to: PGFPYYMSLEVN*RPGSLRTAYVD Trigger: GTCCACATAAGCAGTTCTCAGTGAACCGGGCCTTCAGTTTACCTCAAGTGACATGTAGTAAGGAAAGCCCGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027146.9 |
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| 3UTR CCA 72 bp | CATCCAGAAGACAGCATGTCGCCATCCGAGGGAAGGTaGGACTGTAAGTGCAGTATTTCTTCATGTGCAGTT | + |
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Preference number: 3 (lower is better) Translates to: HPEDSMSPSEGR*DCKCSISSCAV Trigger: AACTGCACATGAAGAAATACTGCACTTACAGTCCCACCTTCCCTCGGATGGCGACATGCTGTCTTCTGGATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027146.9 ENSMUST00000187184.7 ENSMUST00000190771.7 |
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| 3UTR GCA 72 bp | CCAATCAGTATGCAGCAGAATGACAGCTCACACAGCTaGAGAGACTGTCGCAGTATTTCCATAGTAAACCCC | + |
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Preference number: 3 (lower is better) Translates to: PISMQQNDSSHS*RDCRSISIVNP Trigger: GGGGTTTACTATGGAAATACTGCGACAGTCTCTGCAGCTGTGTGAGCTGTCATTCTGCTGCATACTGATTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027146.9 |
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| 3UTR TCA 72 bp | CGCTCTGGCTATGGAAGAGCTAAGAAGTTCCTTAAATaGTCAGACAGAAACCTGCAAAGCGAGTTCGGAGCA | + |
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Preference number: 3 (lower is better) Translates to: RSGYGRAKKFLK*SDRNLQSEFGA Trigger: TGCTCCGAACTCGCTTTGCAGGTTTCTGTCTGATCATTTAAGGAACTTCTTAGCTCTTCCATAGCCAGAGCG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027146.9 |
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| 3UTR TCA 72 bp | CCTAAATTCAGTGTCATCCCAGGGCAGGTAGGTACATaGTTGTTAATAGAGCAGGTGCTAGCAGAGAGAAGG | + |
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Preference number: 3 (lower is better) Translates to: PKFSVIPGQVGT*LLIEQVLAERR Trigger: CCTTCTCTCTGCTAGCACCTGCTCTATTAACAATCATGTACCTACCTGCCCTGGGATGACACTGAATTTAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027146.9 |
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| 3UTR GCA 72 bp | TTTTCTGTAACTGAGATTCAGCAACATGCTACTAAGTaGACTGTGCTGCAGAGAGTGACCTCCATGTTCCCG | + |
|
Preference number: 3 (lower is better) Translates to: FSVTEIQQHATK*TVLQRVTSMFP Trigger: CGGGAACATGGAGGTCACTCTCTGCAGCACAGTGCACTTAGTAGCATGTTGCTGAATCTCAGTTACAGAAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027146.9 |
||
| 3UTR TCA 72 bp | ATGACATTTTGGAGACCAGTCACGGGACTAGTGTGCTaGGCTTTGTCTTGTTCAAGAGGAGACAATGATCTG | + |
|
Preference number: 3 (lower is better) Translates to: MTFWRPVTGLVC*ALSCSRGDNDL Trigger: CAGATCATTGTCTCCTCTTGAACAAGACAAAGCTCAGCACACTAGTCCCGTGACTGGTCTCCAAAATGTCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027146.9 |
||
| 3UTR GCA 72 bp | AAGATGAAGGTTTGGAAAGACCAAACTTGTGAGGTGTaGAACTGGGTCAGAGAAGCACAAACACAAGCCAAG | + |
|
Preference number: 3 (lower is better) Translates to: KMKVWKDQTCEV*NWVREAQTQAK Trigger: CTTGGCTTGTGTTTGTGCTTCTCTGACCCAGTTGCACACCTCACAAGTTTGGTCTTTCCAAACCTTCATCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027146.9 |
||
| 3UTR GCA 72 bp | GCTGAGCTTTGTCTTGTTCAAGAGGAGACAATGATCTaGATTCCCACGCCATTTCACAAAACAACCACAGGT | + |
|
Preference number: 3 (lower is better) Translates to: AELCLVQEETMI*IPTPFHKTTTG Trigger: ACCTGTGGTTGTTTTGTGAAATGGCGTGGGAATGCAGATCATTGTCTCCTCTTGAACAAGACAAAGCTCAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027146.9 |
||
| 3UTR TCA 72 bp | AGTGTGCTGAGCTTTGTCTTGTTCAAGAGGAGACAATaGTCTGCATTCCCACGCCATTTCACAAAACAACCA | + |
|
Preference number: 3 (lower is better) Translates to: SVLSFVLFKRRQ*SAFPRHFTKQP Trigger: TGGTTGTTTTGTGAAATGGCGTGGGAATGCAGATCATTGTCTCCTCTTGAACAAGACAAAGCTCAGCACACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027146.9 |
||
| 3UTR TCA 72 bp | AAGGAAACACTAGCGTATCACAGCTTCTTGGTCATATaGTGTCTGCTTTACCCAGCCAGCAGCTCGTTTTTA | + |
|
Preference number: 3 (lower is better) Translates to: KETLAYHSFLVI*CLLYPASSSFL Trigger: TAAAAACGAGCTGCTGGCTGGGTAAAGCAGACATCATATGACCAAGAAGCTGTGATACGCTAGTGTTTCCTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027146.9 |
||
| 3UTR CCA 72 bp | ACCCTAACTTGTCATTTAGGAGAGAAGATGAAGGTTTaGAAAGACCAAACTTGTGAGGTGTGCAACTGGGTC | + |
|
Preference number: 3 (lower is better) Translates to: TLTCHLGEKMKV*KDQTCEVCNWV Trigger: GACCCAGTTGCACACCTCACAAGTTTGGTCTTTCCAAACCTTCATCTTCTCTCCTAAATGACAAGTTAGGGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027146.9 |
||
| 3UTR TCA 72 bp | ACTATGTCCACAAAGTTTATCGTAACCCACAAATCTTaGATTCAGCTTGTCCCCATTTGTCCCTGTCACAGC | + |
|
Preference number: 3 (lower is better) Translates to: TMSTKFIVTHKS*IQLVPICPCHS Trigger: GCTGTGACAGGGACAAATGGGGACAAGCTGAATTCAAGATTTGTGGGTTACGATAAACTTTGTGGACATAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027146.9 |
||
| 3UTR TCA 72 bp | CAAGGTGTCATTATTTGGCCTAAGAGTACAACACGATaGCAGAAGGAAACACTAGCGTATCACAGCTTCTTG | + |
|
Preference number: 3 (lower is better) Translates to: QGVIIWPKSTTR*QKETLAYHSFL Trigger: CAAGAAGCTGTGATACGCTAGTGTTTCCTTCTGTCATCGTGTTGTACTCTTAGGCCAAATAATGACACCTTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027146.9 |
||
| 3UTR GCA 72 bp | AAGAATGTGCAATATGCATGTGCATGCAAACTGTACTaGATTCAAACACTGACCTGTATGTATGCCAGCCAG | + |
|
Preference number: 3 (lower is better) Translates to: KNVQYACACKLY*IQTLTCMYASQ Trigger: CTGGCTGGCATACATACAGGTCAGTGTTTGAATGCAGTACAGTTTGCATGCACATGCATATTGCACATTCTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027146.9 |
||
| 3UTR-3UTR CAA 90 bp | TCCGTAGGGGAGGTAAACACAGAACCCACAACAATTCAACTCATCCTAGTAGTTTTAGACCATTTTAAATaGCCAAGCATCCTACCCAGA | + |
|
Preference number: 3 (lower is better) Translates to: SVGEVNTEPTTIQLILVVLDHFK*PSILPR Trigger: TCTGGGTAGGATGCTTGGCAATTTAAAATGGTCTAA...AACTACTAGGATGAGTTGAATTGTTGTGGGTTCTGTGTTTACCTCCCCTACGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000027146.9 ENSMUST00000190771.7 |
||
| 3UTR-3UTR CAA 90 bp | ATATGCATGTGCATGCAAACTGTACTGCATTCAAACACTGACCTGTATGTATGCCAAAGAAGTTCCCTTTaGTCTCCAGCAAAGGTAGTA | + |
|
Preference number: 3 (lower is better) Translates to: ICMCMQTVLHSNTDLYVCQRSSL*SPAKVV Trigger: TACTACCTTTGCTGGAGACAAAAGGGAACTTCTTTG...GCATACATACAGGTCAGTGTTTGAATGCAGTACAGTTTGCATGCACATGCATAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027146.9 |
||
| 3UTR TCA 72 bp | GTGTTACCACACAGCAGACCTCTCAGCATTTACAAATaGCTGTCAAATAATCCAGTTATGGTCAGGTTTGTT | + |
|
Preference number: 3 (lower is better) Translates to: VLPHSRPLSIYK*LSNNPVMVRFV Trigger: AACAAACCTGACCATAACTGGATTATTTGACAGTCATTTGTAAATGCTGAGAGGTCTGCTGTGTGGTAACAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027146.9 |
||
| 3UTR GCA 72 bp | AGCAACAACGAAAATATCAGCAGTCCCTCAATCCCTTaGATCCTTCCAGTGTGTTCCTTTAAATATCCATTT | + |
|
Preference number: 3 (lower is better) Translates to: SNNENISSPSIP*ILPVCSFKYPF Trigger: AAATGGATATTTAAAGGAACACACTGGAAGGATGCAAGGGATTGAGGGACTGCTGATATTTTCGTTGTTGCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027146.9 |
||
| 3UTR CCA 72 bp | CAAAACCAACAATTGGCATTTGATATAGCTCTGGTTTaGTGCATTCTCTTACATGTTAAGGAACCAGTTGGA | + |
|
Preference number: 3 (lower is better) Translates to: QNQQLAFDIALV*CILLHVKEPVG Trigger: TCCAACTGGTTCCTTAACATGTAAGAGAATGCACCAAACCAGAGCTATATCAAATGCCAATTGTTGGTTTTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027146.9 |
||
| CDS-3UTR TCA 90 bp | ATAGACAGTGACAGCATCCAGAAGACAGCATGTCGCCATCCGAGGGAAGGTGGGGTACATGGTGACTCATaGCCTGCCCGGCAGCCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: IDSDSIQKTACRHPREGGVHGDS*PARQPP Trigger: TGGAGGCTGCCGGGCAGGTCATGAGTCACCATGTAC...CCCACCTTCCCTCGGATGGCGACATGCTGTCTTCTGGATGCTGTCACTGTCTAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027146.9 ENSMUST00000187184.7 ENSMUST00000190771.7 |
||
| CDS-3UTR CCA 90 bp | ATAGACAGTGACAGCATCCAGAAGACAGCATGTCGCCATCCGAGGGAAGGTGGGCTGCTCCCCTCATCGTaGCCCCTGATCTCATCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: IDSDSIQKTACRHPREGGLLPSS*PLISSS Trigger: TGAGGATGAGATCAGGGGCCACGATGAGGGGAGCAG...CCCACCTTCCCTCGGATGGCGACATGCTGTCTTCTGGATGCTGTCACTGTCTAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027146.9 ENSMUST00000187184.7 ENSMUST00000190771.7 |
||
| CDS-3UTR CCA 90 bp | CATCCAGAAGACAGCATGTCGCCATCCGAGGGAAGGTGGGACTGTAAGTGCAGTCGAGGCAGCTATTGCTaGGCGAGGCCTCTCTTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: HPEDSMSPSEGRWDCKCSRGSYC*ARPLFP Trigger: AGGAAAGAGAGGCCTCGCCCAGCAATAGCTGCCTCG...ACTGCACTTACAGTCCCACCTTCCCTCGGATGGCGACATGCTGTCTTCTGGATG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027146.9 ENSMUST00000187184.7 ENSMUST00000190771.7 |
||
| CDS-3UTR TCA 90 bp | GAAGACAGCATGTCGCCATCCGAGGGAAGGTGGGACTGTAAGTGCAGTATTTCTGTACATGGTGACTCATaGCCTGCCCGGCAGCCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: EDSMSPSEGRWDCKCSISVHGDS*PARQPP Trigger: TGGAGGCTGCCGGGCAGGTCATGAGTCACCATGTAC...AGAAATACTGCACTTACAGTCCCACCTTCCCTCGGATGGCGACATGCTGTCTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027146.9 ENSMUST00000187184.7 ENSMUST00000190771.7 |
||
| CDS-3UTR TCA 90 bp | ATCCAGAAGACAGCATGTCGCCATCCGAGGGAAGGTGGGACTGTAAGTGCAGTACTTGTGTTCCTCCAGTaGGCTGCGCTGCTTGTAGCT | + |
|
Preference number: 4 (lower is better) Translates to: IQKTACRHPREGGTVSAVLVFLQ*AALLVA Trigger: AGCTACAAGCAGCGCAGCTCACTGGAGGAACACAAG...TACTGCACTTACAGTCCCACCTTCCCTCGGATGGCGACATGCTGTCTTCTGGAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027146.9 ENSMUST00000187184.7 ENSMUST00000190771.7 |
||
| CDS-3UTR TCA 90 bp | ACAGCATGTCGCCATCCGAGGGAAGGTGGGACTGTAAGTGCAGTATTTCTTCATTGCTGCATCAGAGGGTaGAGGGCCTCAGCTCCAAGG | + |
|
Preference number: 4 (lower is better) Translates to: TACRHPREGGTVSAVFLHCCIRG*RASAPR Trigger: CCTTGGAGCTGAGGCCCTTCACCCTCTGATGCAGCA...ATGAAGAAATACTGCACTTACAGTCCCACCTTCCCTCGGATGGCGACATGCTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027146.9 ENSMUST00000187184.7 ENSMUST00000190771.7 |
||
| CDS-3UTR GCA 90 bp | ATCCAGAAGACAGCATGTCGCCATCCGAGGGAAGGTGGGACTGTAAGTGCAGTATCACGGCTCAGGGGCTaGCTGTCACACTCTTCATCA | + |
|
Preference number: 4 (lower is better) Translates to: IQKTACRHPREGGTVSAVSRLRG*LSHSSS Trigger: TGATGAAGAGTGTGACAGGCAGCCCCTGAGCCGTGA...TACTGCACTTACAGTCCCACCTTCCCTCGGATGGCGACATGCTGTCTTCTGGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027146.9 ENSMUST00000187184.7 ENSMUST00000190771.7 |
||
| CDS-3UTR GCA 90 bp | ATAGACAGTGACAGCATCCAGAAGACAGCATGTCGCCATCCGAGGGAAGGTGGGTGTAGCCACAGATGTTaGATTCCAGTGGGTCCCGGT | + |
|
Preference number: 4 (lower is better) Translates to: IDSDSIQKTACRHPREGGCSHRC*IPVGPG Trigger: ACCGGGACCCACTGGAATGCAACATCTGTGGCTACA...CCCACCTTCCCTCGGATGGCGACATGCTGTCTTCTGGATGCTGTCACTGTCTAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027146.9 ENSMUST00000187184.7 ENSMUST00000190771.7 |
||
| CDS-3UTR CCA 90 bp | CCAGAAGACAGCATGTCGCCATCCGAGGGAAGGTGGGACTGTAAGTGCAGTATTAAAGAAGCTCCGCACTaGTTACAGTGGAAGGGCCGC | + |
|
Preference number: 4 (lower is better) Translates to: PEDSMSPSEGRWDCKCSIKEAPH*LQWKGR Trigger: GCGGCCCTTCCACTGTAACCAGTGCGGAGCTTCTTT...AATACTGCACTTACAGTCCCACCTTCCCTCGGATGGCGACATGCTGTCTTCTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027146.9 ENSMUST00000187184.7 ENSMUST00000190771.7 |
||
| CDS-3UTR CCA 90 bp | CCAGAAGACAGCATGTCGCCATCCGAGGGAAGGTGGGACTGTAAGTGCAGTATTGAGGCCTCTCTTTCCTaGGGTCGACTCTTTGGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: PEDSMSPSEGRWDCKCSIEASLS*GRLFGL Trigger: CAGACCAAAGAGTCGACCCCAGGAAAGAGAGGCCTC...AATACTGCACTTACAGTCCCACCTTCCCTCGGATGGCGACATGCTGTCTTCTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027146.9 ENSMUST00000187184.7 ENSMUST00000190771.7 |
||
| CDS-3UTR CCA 90 bp | ATCCAGAAGACAGCATGTCGCCATCCGAGGGAAGGTGGGACTGTAAGTGCAGTAGATGTTGCATTCCAGTaGGTCCCGGTAGCCATGGCA | + |
|
Preference number: 4 (lower is better) Translates to: IQKTACRHPREGGTVSAVDVAFQ*VPVAMA Trigger: TGCCATGGCTACCGGGACCCACTGGAATGCAACATC...TACTGCACTTACAGTCCCACCTTCCCTCGGATGGCGACATGCTGTCTTCTGGAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027146.9 ENSMUST00000187184.7 ENSMUST00000190771.7 |
||
| 3UTR CAA 72 bp | AGGCGCAGTCCTGAATCTAGGGGCAGACAGCTCTCCTaGTCCTCTCCAGCCTCTTCCATGAATCTTTCTACC | + |
|
Preference number: 4 (lower is better) Translates to: RRSPESRGRQLS*SSPASSMNLST Trigger: GGTAGAAAGATTCATGGAAGAGGCTGGAGAGGACAAGGAGAGCTGTCTGCCCCTAGATTCAGGACTGCGCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027146.9 |
||
| CDS-3UTR TCA 90 bp | GCATGTCGCCATCCGAGGGAAGGTGGGACTGTAAGTGCAGTATTTCTTCATGTGCTTGTGTTCCTCCAGTaGGCTGCGCTGCTTGTAGCT | + |
|
Preference number: 4 (lower is better) Translates to: ACRHPREGGTVSAVFLHVLVFLQ*AALLVA Trigger: AGCTACAAGCAGCGCAGCTCACTGGAGGAACACAAG...CACATGAAGAAATACTGCACTTACAGTCCCACCTTCCCTCGGATGGCGACATGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027146.9 ENSMUST00000187184.7 ENSMUST00000190771.7 |
||
| CDS-3UTR GCA 90 bp | GCATGTCGCCATCCGAGGGAAGGTGGGACTGTAAGTGCAGTATTTCTTCATGTGTCACGGCTCAGGGGCTaGCTGTCACACTCTTCATCA | + |
|
Preference number: 4 (lower is better) Translates to: ACRHPREGGTVSAVFLHVSRLRG*LSHSSS Trigger: TGATGAAGAGTGTGACAGGCAGCCCCTGAGCCGTGA...CACATGAAGAAATACTGCACTTACAGTCCCACCTTCCCTCGGATGGCGACATGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027146.9 ENSMUST00000187184.7 ENSMUST00000190771.7 |
||
| CDS-3UTR GCA 90 bp | GAGGGAAGGTGGGACTGTAAGTGCAGTATTTCTTCATGTGCAGTTCTTCATAGGGGGGTTCTTCTAGGCTaGTCCCCTCATCGTGGCCCC | + |
|
Preference number: 4 (lower is better) Translates to: EGRWDCKCSISSCAVLHRGVLLG*SPHRGP Trigger: GGGGCCACGATGAGGGGAGCAGCCTAGAAGAACCCC...CCTATGAAGAACTGCACATGAAGAAATACTGCACTTACAGTCCCACCTTCCCTC 53% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000027146.9 ENSMUST00000187184.7 ENSMUST00000190771.7 |
||
| CDS-3UTR GCA 90 bp | AAGACAGCATGTCGCCATCCGAGGGAAGGTGGGACTGTAAGTGCAGTATTTCTTGTTCCTCCAGTGAGCTaGGCTGCTTGTAGCTTCGGC | + |
|
Preference number: 4 (lower is better) Translates to: KTACRHPREGGTVSAVFLVPPVS*AACSFG Trigger: GCCGAAGCTACAAGCAGCGCAGCTCACTGGAGGAAC...AAGAAATACTGCACTTACAGTCCCACCTTCCCTCGGATGGCGACATGCTGTCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027146.9 ENSMUST00000187184.7 ENSMUST00000190771.7 |
||
| CDS-3UTR GCA 90 bp | ACAGCATGTCGCCATCCGAGGGAAGGTGGGACTGTAAGTGCAGTATTTCTTCATGTTCCTCCAGTGAGCTaGGCTGCTTGTAGCTTCGGC | + |
|
Preference number: 4 (lower is better) Translates to: TACRHPREGGTVSAVFLHVPPVS*AACSFG Trigger: GCCGAAGCTACAAGCAGCGCAGCTCACTGGAGGAAC...ATGAAGAAATACTGCACTTACAGTCCCACCTTCCCTCGGATGGCGACATGCTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027146.9 ENSMUST00000187184.7 ENSMUST00000190771.7 |
||
| CDS-3UTR GCA 90 bp | CCAGAAGACAGCATGTCGCCATCCGAGGGAAGGTGGGACTGTAAGTGCAGTATTCCACCTCAGCGATTGTaGTTGGTGCATGCTGCATCA | + |
|
Preference number: 4 (lower is better) Translates to: PEDSMSPSEGRWDCKCSIPPQRL*LVHAAS Trigger: TGATGCAGCATGCACCAAGCACAATCGCTGAGGTGG...AATACTGCACTTACAGTCCCACCTTCCCTCGGATGGCGACATGCTGTCTTCTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027146.9 ENSMUST00000187184.7 ENSMUST00000190771.7 |
||
| CDS-3UTR CCA 90 bp | ACAGCATGTCGCCATCCGAGGGAAGGTGGGACTGTAAGTGCAGTATTTCTTCATCGAGGCAGCTATTGCTaGGCGAGGCCTCTCTTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: TACRHPREGGTVSAVFLHRGSYC*ARPLFP Trigger: AGGAAAGAGAGGCCTCGCCCAGCAATAGCTGCCTCG...ATGAAGAAATACTGCACTTACAGTCCCACCTTCCCTCGGATGGCGACATGCTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027146.9 ENSMUST00000187184.7 ENSMUST00000190771.7 |
||
| CDS-3UTR TCA 90 bp | TGTCGCCATCCGAGGGAAGGTGGGACTGTAAGTGCAGTATTTCTTCATGTGCAGTTTGTGCTTGTCATGTaGCTTGGCGAGGCGTGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: CRHPREGGTVSAVFLHVQFVLVM*LGEACC Trigger: ACAGCACGCCTCGCCAAGTCACATGACAAGCACAAA...CTGCACATGAAGAAATACTGCACTTACAGTCCCACCTTCCCTCGGATGGCGACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027146.9 ENSMUST00000187184.7 ENSMUST00000190771.7 |
||
| CDS-3UTR TCA 90 bp | ACAGCATGTCGCCATCCGAGGGAAGGTGGGACTGTAAGTGCAGTATTTCTTCATATTCCTCCCTCGCCTTaGAGGTCCTGGACTTTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: TACRHPREGGTVSAVFLHIPPSP*RSWTFL Trigger: CAGGAAAGTCCAGGACCTTCAAGGCGAGGGAGGAAT...ATGAAGAAATACTGCACTTACAGTCCCACCTTCCCTCGGATGGCGACATGCTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027146.9 ENSMUST00000187184.7 ENSMUST00000190771.7 |
||
| CDS-3UTR TCA 90 bp | CCAGAAGACAGCATGTCGCCATCCGAGGGAAGGTGGGACTGTAAGTGCAGTATTGGCCGCTCACCAGTGTaGCTCCTTTTATGTACCATA | + |
|
Preference number: 4 (lower is better) Translates to: PEDSMSPSEGRWDCKCSIGRSPV*LLLCTI Trigger: TATGGTACATAAAAGGAGTCACACTGGTGAGCGGCC...AATACTGCACTTACAGTCCCACCTTCCCTCGGATGGCGACATGCTGTCTTCTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027146.9 ENSMUST00000190771.7 |
||
| CDS-3UTR TCA 90 bp | GCATGTCGCCATCCGAGGGAAGGTGGGACTGTAAGTGCAGTATTTCTTCATGTGCGGCAGCCTCCATGCTaGCATTCTGGAGATAGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: ACRHPREGGTVSAVFLHVRQPPC*HSGDSC Trigger: ACAACTATCTCCAGAATGTCAGCATGGAGGCTGCCG...CACATGAAGAAATACTGCACTTACAGTCCCACCTTCCCTCGGATGGCGACATGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027146.9 ENSMUST00000187184.7 ENSMUST00000190771.7 |
||
| CDS-3UTR TCA 90 bp | GGGACTGTAAGTGCAGTATTTCTTCATGTGCAGTTCTTCATAGGGGTCCCCTTTTGCTGCATCAGAGGGTaGAGGGCCTCAGCTCCAAGG | + |
|
Preference number: 4 (lower is better) Translates to: GTVSAVFLHVQFFIGVPFCCIRG*RASAPR Trigger: CCTTGGAGCTGAGGCCCTTCACCCTCTGATGCAGCA...AAAGGGGACCCCTATGAAGAACTGCACATGAAGAAATACTGCACTTACAGTCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000027146.9 ENSMUST00000187184.7 ENSMUST00000190771.7 |
||
| CDS-3UTR GCA 90 bp | TGTCGCCATCCGAGGGAAGGTGGGACTGTAAGTGCAGTATTTCTTCATGTGCAGTGTCGGCCACCTCGCTaGTCTCAATTAGGGGTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: CRHPREGGTVSAVFLHVQCRPPR*SQLGVL Trigger: AAGAACCCCTAATTGAGAGCAGCGAGGTGGCCGACA...CTGCACATGAAGAAATACTGCACTTACAGTCCCACCTTCCCTCGGATGGCGACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027146.9 ENSMUST00000187184.7 ENSMUST00000190771.7 |
||
| CDS-3UTR GCA 90 bp | GAAGACAGCATGTCGCCATCCGAGGGAAGGTGGGACTGTAAGTGCAGTATTTCTTGTCGGCCACCTCGCTaGTCTCAATTAGGGGTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: EDSMSPSEGRWDCKCSISCRPPR*SQLGVL Trigger: AAGAACCCCTAATTGAGAGCAGCGAGGTGGCCGACA...AGAAATACTGCACTTACAGTCCCACCTTCCCTCGGATGGCGACATGCTGTCTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027146.9 ENSMUST00000187184.7 ENSMUST00000190771.7 |
||
| CDS-3UTR GCA 90 bp | GCATGTCGCCATCCGAGGGAAGGTGGGACTGTAAGTGCAGTATTTCTTCATGTGGCACATTGGGCCCAATaGAAACCATGCCACAGACGT | + |
|
Preference number: 4 (lower is better) Translates to: ACRHPREGGTVSAVFLHVAHWAQ*KPCHRR Trigger: ACGTCTGTGGCATGGTTTGCATTGGGCCCAATGTGC...CACATGAAGAAATACTGCACTTACAGTCCCACCTTCCCTCGGATGGCGACATGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027146.9 ENSMUST00000190771.7 |
||
| CDS-3UTR GCA 90 bp | AGGTGGGACTGTAAGTGCAGTATTTCTTCATGTGCAGTTCTTCATAGGGGTCCCGTTCCTCCAGTGAGCTaGGCTGCTTGTAGCTTCGGC | + |
|
Preference number: 4 (lower is better) Translates to: RWDCKCSISSCAVLHRGPVPPVS*AACSFG Trigger: GCCGAAGCTACAAGCAGCGCAGCTCACTGGAGGAAC...GGGACCCCTATGAAGAACTGCACATGAAGAAATACTGCACTTACAGTCCCACCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027146.9 ENSMUST00000187184.7 ENSMUST00000190771.7 |
||
| CDS-3UTR GCA 90 bp | CATCCAGAAGACAGCATGTCGCCATCCGAGGGAAGGTGGGACTGTAAGTGCAGTGCGCTTTCCCATATTTaGCGTGAGCTTCTCTATGAC | + |
|
Preference number: 4 (lower is better) Translates to: HPEDSMSPSEGRWDCKCSALSHI*RELLYD Trigger: GTCATAGAGAAGCTCACGGCAAATATGGGAAAGCGC...ACTGCACTTACAGTCCCACCTTCCCTCGGATGGCGACATGCTGTCTTCTGGATG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027146.9 ENSMUST00000187184.7 ENSMUST00000190771.7 |
||
| CDS-3UTR GCA 90 bp | TGTCGCCATCCGAGGGAAGGTGGGACTGTAAGTGCAGTATTTCTTCATGTGCAGAGCGATTGTGCTTGGTaGATGCTGCATCAGAGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: CRHPREGGTVSAVFLHVQSDCAW*MLHQRV Trigger: CACCCTCTGATGCAGCATGCACCAAGCACAATCGCT...CTGCACATGAAGAAATACTGCACTTACAGTCCCACCTTCCCTCGGATGGCGACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027146.9 ENSMUST00000187184.7 ENSMUST00000190771.7 |
||
| CDS-3UTR GCA 90 bp | GCATGTCGCCATCCGAGGGAAGGTGGGACTGTAAGTGCAGTATTTCTTCATGTGAATCGAGGCAGCTATTaGTGGGCGAGGCCTCTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: ACRHPREGGTVSAVFLHVNRGSY*WARPLF Trigger: AAAGAGAGGCCTCGCCCAGCAATAGCTGCCTCGATT...CACATGAAGAAATACTGCACTTACAGTCCCACCTTCCCTCGGATGGCGACATGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027146.9 ENSMUST00000187184.7 ENSMUST00000190771.7 |
||
| CDS-3UTR CCA 90 bp | GAAGACAGCATGTCGCCATCCGAGGGAAGGTGGGACTGTAAGTGCAGTATTTCTGCTTGTCATGTGACTTaGCGAGGCGTGCTGTCCATT | + |
|
Preference number: 4 (lower is better) Translates to: EDSMSPSEGRWDCKCSISACHVT*RGVLSI Trigger: AATGGACAGCACGCCTCGCCAAGTCACATGACAAGC...AGAAATACTGCACTTACAGTCCCACCTTCCCTCGGATGGCGACATGCTGTCTTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027146.9 ENSMUST00000187184.7 ENSMUST00000190771.7 |
||
| CDS-3UTR CCA 90 bp | TGTCGCCATCCGAGGGAAGGTGGGACTGTAAGTGCAGTATTTCTTCATGTGCAGGGTTTACCCACAGAATaGGTCCTGAGGTGTCCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: CRHPREGGTVSAVFLHVQGLPTE*VLRCPV Trigger: CACAGGACACCTCAGGACCCATTCTGTGGGTAAACC...CTGCACATGAAGAAATACTGCACTTACAGTCCCACCTTCCCTCGGATGGCGACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027146.9 ENSMUST00000187184.7 ENSMUST00000190771.7 |
||
| CDS-3UTR TCA 90 bp | GAAGACAGCATGTCGCCATCCGAGGGAAGGTGGGACTGTAAGTGCAGTATTTCTGTGTTCCCCTTCGGGTaGAAGCTCATTGTCACATGT | + |
|
Preference number: 4 (lower is better) Translates to: EDSMSPSEGRWDCKCSISVFPFG*KLIVTC Trigger: ACATGTGACAATGAGCTTTCACCCGAAGGGGAACAC...AGAAATACTGCACTTACAGTCCCACCTTCCCTCGGATGGCGACATGCTGTCTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027146.9 ENSMUST00000187184.7 ENSMUST00000190771.7 |
||
| CDS-3UTR TCA 90 bp | AGAATTATAGACAGTGACAGCATCCAGAAGACAGCATGTCGCCATCCGAGGGAAATTCCTCCCTCGCCTTaGAGGTCCTGGACTTTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: RIIDSDSIQKTACRHPREIPPSP*RSWTFL Trigger: CAGGAAAGTCCAGGACCTTCAAGGCGAGGGAGGAAT...TTCCCTCGGATGGCGACATGCTGTCTTCTGGATGCTGTCACTGTCTATAATTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027146.9 ENSMUST00000187184.7 ENSMUST00000190771.7 |
||
| CDS-3UTR TCA 90 bp | GAAGACAGCATGTCGCCATCCGAGGGAAGGTGGGACTGTAAGTGCAGTATTTCTGACCTGAGAATAAGCTaGGCTTATAACTGGGGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: EDSMSPSEGRWDCKCSISDLRIS*AYNWGH Trigger: GTGGCCCCAGTTATAAGCTCAGCTTATTCTCAGGTC...AGAAATACTGCACTTACAGTCCCACCTTCCCTCGGATGGCGACATGCTGTCTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027146.9 ENSMUST00000187184.7 ENSMUST00000190771.7 |
||
| CDS-3UTR GCA 90 bp | AGCATCCTACCCAGAAAACTCTCAACTTTCCTGCCTTCTATCACAATCCTGAATGGGGTTCTTCTAGGCTaGTCCCCTCATCGTGGCCCC | + |
|
Preference number: 4 (lower is better) Translates to: SILPRKLSTFLPSITILNGVLLG*SPHRGP Trigger: GGGGCCACGATGAGGGGAGCAGCCTAGAAGAACCCC...ATTCAGGATTGTGATAGAAGGCAGGAAAGTTGAGAGTTTTCTGGGTAGGATGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000027146.9 ENSMUST00000190771.7 |
||
| CDS-3UTR GCA 90 bp | GAAGACAGCATGTCGCCATCCGAGGGAAGGTGGGACTGTAAGTGCAGTATTTCTGAGGAGTGGAGCTTTTaGGCTTTCCCATATTTGCCG | + |
|
Preference number: 4 (lower is better) Translates to: EDSMSPSEGRWDCKCSISEEWSF*AFPYLP Trigger: CGGCAAATATGGGAAAGCGCAAAAGCTCCACTCCTC...AGAAATACTGCACTTACAGTCCCACCTTCCCTCGGATGGCGACATGCTGTCTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027146.9 ENSMUST00000187184.7 ENSMUST00000190771.7 |
||
| CDS-3UTR CCA 90 bp | ACAGCATGTCGCCATCCGAGGGAAGGTGGGACTGTAAGTGCAGTATTTCTTCATGCTTGTCATGTGACTTaGCGAGGCGTGCTGTCCATT | + |
|
Preference number: 4 (lower is better) Translates to: TACRHPREGGTVSAVFLHACHVT*RGVLSI Trigger: AATGGACAGCACGCCTCGCCAAGTCACATGACAAGC...ATGAAGAAATACTGCACTTACAGTCCCACCTTCCCTCGGATGGCGACATGCTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027146.9 ENSMUST00000187184.7 ENSMUST00000190771.7 |
||
| CDS-3UTR CCA 90 bp | GAGGGAAGGTGGGACTGTAAGTGCAGTATTTCTTCATGTGCAGTTCTTCATAGGCTGCTCCCCTCATCGTaGCCCCTGATCTCATCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: EGRWDCKCSISSCAVLHRLLPSS*PLISSS Trigger: TGAGGATGAGATCAGGGGCCACGATGAGGGGAGCAG...CCTATGAAGAACTGCACATGAAGAAATACTGCACTTACAGTCCCACCTTCCCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027146.9 ENSMUST00000187184.7 ENSMUST00000190771.7 |
||
| CDS-3UTR CCA 90 bp | AGAATTATAGACAGTGACAGCATCCAGAAGACAGCATGTCGCCATCCGAGGGAAAAAGAAGCTCCGCACTaGTTACAGTGGAAGGGCCGC | + |
|
Preference number: 4 (lower is better) Translates to: RIIDSDSIQKTACRHPREKEAPH*LQWKGR Trigger: GCGGCCCTTCCACTGTAACCAGTGCGGAGCTTCTTT...TTCCCTCGGATGGCGACATGCTGTCTTCTGGATGCTGTCACTGTCTATAATTCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000027146.9 ENSMUST00000187184.7 ENSMUST00000190771.7 |
||
| CDS-3UTR TCA 90 bp | AGAATTATAGACAGTGACAGCATCCAGAAGACAGCATGTCGCCATCCGAGGGAATGGGTGTGCTTGAGGTaGGGTCAATGGCCATATTGG | + |
|
Preference number: 4 (lower is better) Translates to: RIIDSDSIQKTACRHPREWVCLR*GQWPYW Trigger: CCAATATGGCCATTGACCTCACCTCAAGCACACCCA...TTCCCTCGGATGGCGACATGCTGTCTTCTGGATGCTGTCACTGTCTATAATTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027146.9 ENSMUST00000187184.7 ENSMUST00000190771.7 |
||
| CDS-3UTR TCA 90 bp | AGGTGGGACTGTAAGTGCAGTATTTCTTCATGTGCAGTTCTTCATAGGGGTCCCTGGGTGTGCTTGAGGTaGGGTCAATGGCCATATTGG | + |
|
Preference number: 4 (lower is better) Translates to: RWDCKCSISSCAVLHRGPWVCLR*GQWPYW Trigger: CCAATATGGCCATTGACCTCACCTCAAGCACACCCA...GGGACCCCTATGAAGAACTGCACATGAAGAAATACTGCACTTACAGTCCCACCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027146.9 ENSMUST00000187184.7 ENSMUST00000190771.7 |
||
| CDS-3UTR TCA 90 bp | AGAATTATAGACAGTGACAGCATCCAGAAGACAGCATGTCGCCATCCGAGGGAACGGCAGCCTCCATGCTaGCATTCTGGAGATAGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: RIIDSDSIQKTACRHPRERQPPC*HSGDSC Trigger: ACAACTATCTCCAGAATGTCAGCATGGAGGCTGCCG...TTCCCTCGGATGGCGACATGCTGTCTTCTGGATGCTGTCACTGTCTATAATTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027146.9 ENSMUST00000187184.7 ENSMUST00000190771.7 |
||
| CDS-3UTR GCA 90 bp | ACAGCATGTCGCCATCCGAGGGAAGGTGGGACTGTAAGTGCAGTATTTCTTCATGAGGAGTGGAGCTTTTaGGCTTTCCCATATTTGCCG | + |
|
Preference number: 4 (lower is better) Translates to: TACRHPREGGTVSAVFLHEEWSF*AFPYLP Trigger: CGGCAAATATGGGAAAGCGCAAAAGCTCCACTCCTC...ATGAAGAAATACTGCACTTACAGTCCCACCTTCCCTCGGATGGCGACATGCTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027146.9 ENSMUST00000187184.7 ENSMUST00000190771.7 |
||
| CDS-3UTR CCA 90 bp | TGGGACTGTAAGTGCAGTATTTCTTCATGTGCAGTTCTTCATAGGGGTCCCCTTGAGGCCTCTCTTTCCTaGGGTCGACTCTTTGGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: WDCKCSISSCAVLHRGPLEASLS*GRLFGL Trigger: CAGACCAAAGAGTCGACCCCAGGAAAGAGAGGCCTC...AAGGGGACCCCTATGAAGAACTGCACATGAAGAAATACTGCACTTACAGTCCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027146.9 ENSMUST00000187184.7 ENSMUST00000190771.7 |
||
| CDS-3UTR CCA 90 bp | GTAAGTGCAGTATTTCTTCATGTGCAGTTCTTCATAGGGGTCCCCTTTGGAATGCGAGGCAGCTATTGCTaGGCGAGGCCTCTCTTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: VSAVFLHVQFFIGVPFGMRGSYC*ARPLFP Trigger: AGGAAAGAGAGGCCTCGCCCAGCAATAGCTGCCTCG...CATTCCAAAGGGGACCCCTATGAAGAACTGCACATGAAGAAATACTGCACTTAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027146.9 ENSMUST00000187184.7 ENSMUST00000190771.7 |
||
| CDS-3UTR CCA 90 bp | GAAGACAGCATGTCGCCATCCGAGGGAAGGTGGGACTGTAAGTGCAGTATTTCTGACTGGCGGTCATCATaGCTACTTTCTGAGTCAGTA | + |
|
Preference number: 4 (lower is better) Translates to: EDSMSPSEGRWDCKCSISDWRSS*LLSESV Trigger: TACTGACTCAGAAAGTAGCCATGATGACCGCCAGTC...AGAAATACTGCACTTACAGTCCCACCTTCCCTCGGATGGCGACATGCTGTCTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027146.9 ENSMUST00000187184.7 ENSMUST00000190771.7 |
||
| 3UTR CAA 72 bp | ACAATTTCAAGGCTAAGACAGTATGTGGCAGGTGACTaGGACAGTGTAAGGCGCAGTCCTGAATCTAGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: TISRLRQYVAGD*DSVRRSPESRG Trigger: GCCCCTAGATTCAGGACTGCGCCTTACACTGTCCAAGTCACCTGCCACATACTGTCTTAGCCTTGAAATTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027146.9 |
||
| CDS-3UTR TCA 90 bp | AGGTGGGACTGTAAGTGCAGTATTTCTTCATGTGCAGTTCTTCATAGGGGTCCCGGCCGCTCACCAGTGTaGCTCCTTTTATGTACCATA | + |
|
Preference number: 4 (lower is better) Translates to: RWDCKCSISSCAVLHRGPGRSPV*LLLCTI Trigger: TATGGTACATAAAAGGAGTCACACTGGTGAGCGGCC...GGGACCCCTATGAAGAACTGCACATGAAGAAATACTGCACTTACAGTCCCACCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027146.9 ENSMUST00000190771.7 |
||
| CDS-3UTR TCA 90 bp | GTAAGTGCAGTATTTCTTCATGTGCAGTTCTTCATAGGGGTCCCCTTTGGAATGCTTGTGTTCCTCCAGTaGGCTGCGCTGCTTGTAGCT | + |
|
Preference number: 4 (lower is better) Translates to: VSAVFLHVQFFIGVPFGMLVFLQ*AALLVA Trigger: AGCTACAAGCAGCGCAGCTCACTGGAGGAACACAAG...CATTCCAAAGGGGACCCCTATGAAGAACTGCACATGAAGAAATACTGCACTTAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027146.9 ENSMUST00000187184.7 ENSMUST00000190771.7 |
||
| CDS-3UTR TCA 90 bp | AGGTGGGACTGTAAGTGCAGTATTTCTTCATGTGCAGTTCTTCATAGGGGTCCCGACCTGAGAATAAGCTaGGCTTATAACTGGGGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: RWDCKCSISSCAVLHRGPDLRIS*AYNWGH Trigger: GTGGCCCCAGTTATAAGCTCAGCTTATTCTCAGGTC...GGGACCCCTATGAAGAACTGCACATGAAGAAATACTGCACTTACAGTCCCACCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027146.9 ENSMUST00000187184.7 ENSMUST00000190771.7 |
||
| CDS-3UTR TCA 90 bp | TGGGACTGTAAGTGCAGTATTTCTTCATGTGCAGTTCTTCATAGGGGTCCCCTTGGCAGTGCTCACACTTaGAGGCCCTTATCTGTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: WDCKCSISSCAVLHRGPLGSAHT*RPLSVL Trigger: GAGAACAGATAAGGGCCTTCAAGTGTGAGCACTGCC...AAGGGGACCCCTATGAAGAACTGCACATGAAGAAATACTGCACTTACAGTCCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027146.9 ENSMUST00000187184.7 ENSMUST00000190771.7 |
||
| CDS-3UTR TCA 90 bp | GGAAGGTGGGACTGTAAGTGCAGTATTTCTTCATGTGCAGTTCTTCATAGGGGTGGCAGTGCTCACACTTaGAGGCCCTTATCTGTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: GRWDCKCSISSCAVLHRGGSAHT*RPLSVL Trigger: GAGAACAGATAAGGGCCTTCAAGTGTGAGCACTGCC...ACCCCTATGAAGAACTGCACATGAAGAAATACTGCACTTACAGTCCCACCTTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027146.9 ENSMUST00000187184.7 ENSMUST00000190771.7 |
||
| CDS-3UTR TCA 90 bp | ATAGACAGTGACAGCATCCAGAAGACAGCATGTCGCCATCCGAGGGAAGGTGGGTGTGAATGGTGTACATaGCATGGTCTAGAAAAAGGA | + |
|
Preference number: 4 (lower is better) Translates to: IDSDSIQKTACRHPREGGCEWCT*HGLEKG Trigger: TCCTTTTTCTAGACCATGTCATGTACACCATTCACA...CCCACCTTCCCTCGGATGGCGACATGCTGTCTTCTGGATGCTGTCACTGTCTAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000027146.9 ENSMUST00000187184.7 ENSMUST00000190771.7 |
||
| CDS-3UTR GCA 90 bp | GTTTGGTGCATTCTCTTACATGTTAAGGAACCAGTTGGATATTTCTCCAGAAAGGGGGTTCTTCTAGGCTaGTCCCCTCATCGTGGCCCC | + |
|
Preference number: 4 (lower is better) Translates to: VWCILLHVKEPVGYFSRKGVLLG*SPHRGP Trigger: GGGGCCACGATGAGGGGAGCAGCCTAGAAGAACCCC...CTTTCTGGAGAAATATCCAACTGGTTCCTTAACATGTAAGAGAATGCACCAAAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027146.9 |
||
| CDS-3UTR GCA 90 bp | GGGACTGTAAGTGCAGTATTTCTTCATGTGCAGTTCTTCATAGGGGTCCCCTTTTGTCGGCCACCTCGCTaGTCTCAATTAGGGGTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: GTVSAVFLHVQFFIGVPFCRPPR*SQLGVL Trigger: AAGAACCCCTAATTGAGAGCAGCGAGGTGGCCGACA...AAAGGGGACCCCTATGAAGAACTGCACATGAAGAAATACTGCACTTACAGTCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000027146.9 ENSMUST00000187184.7 ENSMUST00000190771.7 |
||
| CDS-3UTR GCA 90 bp | AGGTGGGACTGTAAGTGCAGTATTTCTTCATGTGCAGTTCTTCATAGGGGTCCCGAGGAGTGGAGCTTTTaGGCTTTCCCATATTTGCCG | + |
|
Preference number: 4 (lower is better) Translates to: RWDCKCSISSCAVLHRGPEEWSF*AFPYLP Trigger: CGGCAAATATGGGAAAGCGCAAAAGCTCCACTCCTC...GGGACCCCTATGAAGAACTGCACATGAAGAAATACTGCACTTACAGTCCCACCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027146.9 ENSMUST00000187184.7 ENSMUST00000190771.7 |
||
| CDS-3UTR GCA 90 bp | GAGGGAAGGTGGGACTGTAAGTGCAGTATTTCTTCATGTGCAGTTCTTCATAGGAATCGAGGCAGCTATTaGTGGGCGAGGCCTCTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: EGRWDCKCSISSCAVLHRNRGSY*WARPLF Trigger: AAAGAGAGGCCTCGCCCAGCAATAGCTGCCTCGATT...CCTATGAAGAACTGCACATGAAGAAATACTGCACTTACAGTCCCACCTTCCCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027146.9 ENSMUST00000187184.7 ENSMUST00000190771.7 |
||
| CDS-3UTR CCA 90 bp | GGAAGGTGGGACTGTAAGTGCAGTATTTCTTCATGTGCAGTTCTTCATAGGGGTGCTTGTCATGTGACTTaGCGAGGCGTGCTGTCCATT | + |
|
Preference number: 4 (lower is better) Translates to: GRWDCKCSISSCAVLHRGACHVT*RGVLSI Trigger: AATGGACAGCACGCCTCGCCAAGTCACATGACAAGC...ACCCCTATGAAGAACTGCACATGAAGAAATACTGCACTTACAGTCCCACCTTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027146.9 ENSMUST00000187184.7 ENSMUST00000190771.7 |
||
| CDS-3UTR CCA 90 bp | GGAAGGTGGGACTGTAAGTGCAGTATTTCTTCATGTGCAGTTCTTCATAGGGGTGGTTTACCCACAGAATaGGTCCTGAGGTGTCCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: GRWDCKCSISSCAVLHRGGLPTE*VLRCPV Trigger: CACAGGACACCTCAGGACCCATTCTGTGGGTAAACC...ACCCCTATGAAGAACTGCACATGAAGAAATACTGCACTTACAGTCCCACCTTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027146.9 ENSMUST00000187184.7 ENSMUST00000190771.7 |
||
| CDS-3UTR CCA 90 bp | GTAAGTGCAGTATTTCTTCATGTGCAGTTCTTCATAGGGGTCCCCTTTGGAATGGAGGCCTCTCTTTCCTaGGGTCGACTCTTTGGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: VSAVFLHVQFFIGVPFGMEASLS*GRLFGL Trigger: CAGACCAAAGAGTCGACCCCAGGAAAGAGAGGCCTC...CATTCCAAAGGGGACCCCTATGAAGAACTGCACATGAAGAAATACTGCACTTAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027146.9 ENSMUST00000187184.7 ENSMUST00000190771.7 |
||
| CDS-3UTR CCA 90 bp | ATCCAGAAGACAGCATGTCGCCATCCGAGGGAAGGTGGGACTGTAAGTGCAGTAATGGTGTACATGACATaGTCTAGAAAAAGGACTCGG | + |
|
Preference number: 4 (lower is better) Translates to: IQKTACRHPREGGTVSAVMVYMT*SRKRTR Trigger: CCGAGTCCTTTTTCTAGACCATGTCATGTACACCAT...TACTGCACTTACAGTCCCACCTTCCCTCGGATGGCGACATGCTGTCTTCTGGAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000027146.9 ENSMUST00000187184.7 ENSMUST00000190771.7 |
||
| CDS-3UTR TCA 90 bp | GTAAGTGCAGTATTTCTTCATGTGCAGTTCTTCATAGGGGTCCCCTTTGGAATGCGGCAGCCTCCATGCTaGCATTCTGGAGATAGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: VSAVFLHVQFFIGVPFGMRQPPC*HSGDSC Trigger: ACAACTATCTCCAGAATGTCAGCATGGAGGCTGCCG...CATTCCAAAGGGGACCCCTATGAAGAACTGCACATGAAGAAATACTGCACTTAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027146.9 ENSMUST00000187184.7 ENSMUST00000190771.7 |
||
| CDS-3UTR TCA 90 bp | GCCAAGCATCCTACCCAGAAAACTCTCAACTTTCCTGCCTTCTATCACAATCCTGACCTGAGAATAAGCTaGGCTTATAACTGGGGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: AKHPTQKTLNFPAFYHNPDLRIS*AYNWGH Trigger: GTGGCCCCAGTTATAAGCTCAGCTTATTCTCAGGTC...AGGATTGTGATAGAAGGCAGGAAAGTTGAGAGTTTTCTGGGTAGGATGCTTGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027146.9 ENSMUST00000190771.7 |
||
| CDS-3UTR CCA 90 bp | TCCGTAGGGGAGGTAAACACAGAACCCACAACAATTCAACTCATCCTAGTAGTTGGTTTACCCACAGAATaGGTCCTGAGGTGTCCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: SVGEVNTEPTTIQLILVVGLPTE*VLRCPV Trigger: CACAGGACACCTCAGGACCCATTCTGTGGGTAAACC...AACTACTAGGATGAGTTGAATTGTTGTGGGTTCTGTGTTTACCTCCCCTACGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027146.9 ENSMUST00000190771.7 |
||
| CDS-3UTR CCA 90 bp | AGAATTATAGACAGTGACAGCATCCAGAAGACAGCATGTCGCCATCCGAGGGAACTCCTTCATGTAAGCTaGGCTTTGTTTCCTCTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: RIIDSDSIQKTACRHPRELLHVS*ALFPLG Trigger: CCCAAGAGGAAACAAAGCCCAGCTTACATGAAGGAG...TTCCCTCGGATGGCGACATGCTGTCTTCTGGATGCTGTCACTGTCTATAATTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027146.9 ENSMUST00000187184.7 ENSMUST00000190771.7 |
||
| CDS-3UTR TCA 90 bp | AATGACTTAGACCATTTTAAATTGCCAAGCATCCTACCCAGAAAACTCTCAACTGTACATGGTGACTCATaGCCTGCCCGGCAGCCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: NDLDHFKLPSILPRKLSTVHGDS*PARQPP Trigger: TGGAGGCTGCCGGGCAGGTCATGAGTCACCATGTAC...AGTTGAGAGTTTTCTGGGTAGGATGCTTGGCAATTTAAAATGGTCTAAGTCATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027146.9 ENSMUST00000190771.7 |
||
| CDS-3UTR TCA 90 bp | TGTAAGTGCAGTATTTCTTCATGTGCAGTTCTTCATAGGGGTCCCCTTTGGAATGGCAGTGCTCACACTTaGAGGCCCTTATCTGTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: CKCSISSCAVLHRGPLWNGSAHT*RPLSVL Trigger: GAGAACAGATAAGGGCCTTCAAGTGTGAGCACTGCC...ATTCCAAAGGGGACCCCTATGAAGAACTGCACATGAAGAAATACTGCACTTACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027146.9 ENSMUST00000187184.7 ENSMUST00000190771.7 |
||
| CDS-3UTR TCA 90 bp | GCATGTCGCCATCCGAGGGAAGGTGGGACTGTAAGTGCAGTATTTCTTCATGTGTGTGAATGGTGTACATaGCATGGTCTAGAAAAAGGA | + |
|
Preference number: 4 (lower is better) Translates to: ACRHPREGGTVSAVFLHVCEWCT*HGLEKG Trigger: TCCTTTTTCTAGACCATGTCATGTACACCATTCACA...CACATGAAGAAATACTGCACTTACAGTCCCACCTTCCCTCGGATGGCGACATGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000027146.9 ENSMUST00000187184.7 ENSMUST00000190771.7 |
||
| CDS-3UTR GCA 90 bp | GAAGACAGCATGTCGCCATCCGAGGGAAGGTGGGACTGTAAGTGCAGTATTTCTCACTCTTCATCACTCTaGATTTCCAGCTTTACAGAA | + |
|
Preference number: 4 (lower is better) Translates to: EDSMSPSEGRWDCKCSISHSSSL*ISSFTE Trigger: TTCTGTAAAGCTGGAAATGCAGAGTGATGAAGAGTG...AGAAATACTGCACTTACAGTCCCACCTTCCCTCGGATGGCGACATGCTGTCTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027146.9 ENSMUST00000187184.7 ENSMUST00000190771.7 |
||
| CDS-3UTR GCA 90 bp | GCCAAGCATCCTACCCAGAAAACTCTCAACTTTCCTGCCTTCTATCACAATCCTGCCCAATGCAAACCATaGCACAGACGTCACATTTCA | + |
|
Preference number: 4 (lower is better) Translates to: AKHPTQKTLNFPAFYHNPAQCKP*HRRHIS Trigger: TGAAATGTGACGTCTGTGGCATGGTTTGCATTGGGC...AGGATTGTGATAGAAGGCAGGAAAGTTGAGAGTTTTCTGGGTAGGATGCTTGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027146.9 ENSMUST00000190771.7 |
||
| CDS-3UTR GCA 90 bp | CCCAGAAAACTCTCAACTTTCCTGCCTTCTATCACAATCCTGAATATGAATGGCGCACATTGGGCCCAATaGAAACCATGCCACAGACGT | + |
|
Preference number: 4 (lower is better) Translates to: PRKLSTFLPSITILNMNGAHWAQ*KPCHRR Trigger: ACGTCTGTGGCATGGTTTGCATTGGGCCCAATGTGC...GCCATTCATATTCAGGATTGTGATAGAAGGCAGGAAAGTTGAGAGTTTTCTGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027146.9 ENSMUST00000190771.7 |
||
| CDS-3UTR GCA 90 bp | GGAAGGTGGGACTGTAAGTGCAGTATTTCTTCATGTGCAGTTCTTCATAGGGGTGCGCTTTCCCATATTTaGCGTGAGCTTCTCTATGAC | + |
|
Preference number: 4 (lower is better) Translates to: GRWDCKCSISSCAVLHRGALSHI*RELLYD Trigger: GTCATAGAGAAGCTCACGGCAAATATGGGAAAGCGC...ACCCCTATGAAGAACTGCACATGAAGAAATACTGCACTTACAGTCCCACCTTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027146.9 ENSMUST00000187184.7 ENSMUST00000190771.7 |
||
| CDS-3UTR GCA 90 bp | AGCATCCTACCCAGAAAACTCTCAACTTTCCTGCCTTCTATCACAATCCTGAATAATCGAGGCAGCTATTaGTGGGCGAGGCCTCTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: SILPRKLSTFLPSITILNNRGSY*WARPLF Trigger: AAAGAGAGGCCTCGCCCAGCAATAGCTGCCTCGATT...ATTCAGGATTGTGATAGAAGGCAGGAAAGTTGAGAGTTTTCTGGGTAGGATGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027146.9 ENSMUST00000190771.7 |
||
| CDS-3UTR GCA 90 bp | AGCATCCTACCCAGAAAACTCTCAACTTTCCTGCCTTCTATCACAATCCTGAATTGTAGCCACAGATGTTaGATTCCAGTGGGTCCCGGT | + |
|
Preference number: 4 (lower is better) Translates to: SILPRKLSTFLPSITILNCSHRC*IPVGPG Trigger: ACCGGGACCCACTGGAATGCAACATCTGTGGCTACA...ATTCAGGATTGTGATAGAAGGCAGGAAAGTTGAGAGTTTTCTGGGTAGGATGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027146.9 ENSMUST00000190771.7 |
||
| CDS-3UTR CCA 90 bp | TGTAAGTGCAGTATTTCTTCATGTGCAGTTCTTCATAGGGGTCCCCTTTGGAATCTCAGCGATTGTGCTTaGTGCATGCTGCATCAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: CKCSISSCAVLHRGPLWNLSDCA*CMLHQR Trigger: CCTCTGATGCAGCATGCACCAAGCACAATCGCTGAG...ATTCCAAAGGGGACCCCTATGAAGAACTGCACATGAAGAAATACTGCACTTACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027146.9 ENSMUST00000187184.7 ENSMUST00000190771.7 |
||
| CDS-3UTR CCA 90 bp | CATCCAGAAGACAGCATGTCGCCATCCGAGGGAAGGTGGGACTGTAAGTGCAGTTCTTTCTATCCTGTTTaGATGATAGACCTGAGAATA | + |
|
Preference number: 4 (lower is better) Translates to: HPEDSMSPSEGRWDCKCSSFYPV*MIDLRI Trigger: TATTCTCAGGTCTATCATCCAAACAGGATAGAAAGA...ACTGCACTTACAGTCCCACCTTCCCTCGGATGGCGACATGCTGTCTTCTGGATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027146.9 ENSMUST00000187184.7 ENSMUST00000190771.7 |
||
| CDS-3UTR CCA 90 bp | TGTAAGTGCAGTATTTCTTCATGTGCAGTTCTTCATAGGGGTCCCCTTTGGAATCTGGGGTCGACTCTTTaGTCTGATGAGAGAGATGGG | + |
|
Preference number: 4 (lower is better) Translates to: CKCSISSCAVLHRGPLWNLGSTL*SDERDG Trigger: CCCATCTCTCTCATCAGACCAAAGAGTCGACCCCAG...ATTCCAAAGGGGACCCCTATGAAGAACTGCACATGAAGAAATACTGCACTTACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000027146.9 ENSMUST00000187184.7 ENSMUST00000190771.7 |
||
| CDS-3UTR CCA 90 bp | AGCATCCTACCCAGAAAACTCTCAACTTTCCTGCCTTCTATCACAATCCTGAATCTGGGGTCGACTCTTTaGTCTGATGAGAGAGATGGG | + |
|
Preference number: 4 (lower is better) Translates to: SILPRKLSTFLPSITILNLGSTL*SDERDG Trigger: CCCATCTCTCTCATCAGACCAAAGAGTCGACCCCAG...ATTCAGGATTGTGATAGAAGGCAGGAAAGTTGAGAGTTTTCTGGGTAGGATGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027146.9 ENSMUST00000190771.7 |
||
| CDS-3UTR CCA 90 bp | GAGGGAAGGTGGGACTGTAAGTGCAGTATTTCTTCATGTGCAGTTCTTCATAGGCTCCTTCATGTAAGCTaGGCTTTGTTTCCTCTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: EGRWDCKCSISSCAVLHRLLHVS*ALFPLG Trigger: CCCAAGAGGAAACAAAGCCCAGCTTACATGAAGGAG...CCTATGAAGAACTGCACATGAAGAAATACTGCACTTACAGTCCCACCTTCCCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027146.9 ENSMUST00000187184.7 ENSMUST00000190771.7 |
||
| 3UTR CAA 72 bp | TTCCTCAAACACAAGCAGCAAGTTATGTCTGCCAAGTaGATTCCCCCGAATGCCTTGATAACAGTGTGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: FLKHKQQVMSAK*IPPNALITVCS Trigger: GGAGCACACTGTTATCAAGGCATTCGGGGGAATCAACTTGGCAGACATAACTTGCTGCTTGTGTTTGAGGAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027146.9 |
||
| CDS-3UTR TCA 90 bp | AGCATCCTACCCAGAAAACTCTCAACTTTCCTGCCTTCTATCACAATCCTGAATGTGTTCCCCTTCGGGTaGAAGCTCATTGTCACATGT | + |
|
Preference number: 4 (lower is better) Translates to: SILPRKLSTFLPSITILNVFPFG*KLIVTC Trigger: ACATGTGACAATGAGCTTTCACCCGAAGGGGAACAC...ATTCAGGATTGTGATAGAAGGCAGGAAAGTTGAGAGTTTTCTGGGTAGGATGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027146.9 ENSMUST00000190771.7 |
||
| CDS-3UTR TCA 90 bp | CATCCTACCCAGAAAACTCTCAACTTTCCTGCCTTCTATCACAATCCTGAATATTTTGTGCTTGTCATGTaGCTTGGCGAGGCGTGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: HPTQKTLNFPAFYHNPEYFVLVM*LGEACC Trigger: ACAGCACGCCTCGCCAAGTCACATGACAAGCACAAA...ATATTCAGGATTGTGATAGAAGGCAGGAAAGTTGAGAGTTTTCTGGGTAGGATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027146.9 ENSMUST00000190771.7 |
||
| CDS-3UTR TCA 90 bp | TCAATTATAAATTCCGTAGGGGAGGTAAACACAGAACCCACAACAATTCAACTCATTCCTCCCTCGCCTTaGAGGTCCTGGACTTTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: SIINSVGEVNTEPTTIQLIPPSP*RSWTFL Trigger: CAGGAAAGTCCAGGACCTTCAAGGCGAGGGAGGAAT...GAGTTGAATTGTTGTGGGTTCTGTGTTTACCTCCCCTACGGAATTTATAATTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027146.9 ENSMUST00000190771.7 |
||
| CDS-3UTR GCA 90 bp | CATCCTACCCAGAAAACTCTCAACTTTCCTGCCTTCTATCACAATCCTGAATATCCACCTCAGCGATTGTaGTTGGTGCATGCTGCATCA | + |
|
Preference number: 4 (lower is better) Translates to: HPTQKTLNFPAFYHNPEYPPQRL*LVHAAS Trigger: TGATGCAGCATGCACCAAGCACAATCGCTGAGGTGG...ATATTCAGGATTGTGATAGAAGGCAGGAAAGTTGAGAGTTTTCTGGGTAGGATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027146.9 ENSMUST00000190771.7 |
||
| CDS-3UTR CCA 90 bp | CATCCTACCCAGAAAACTCTCAACTTTCCTGCCTTCTATCACAATCCTGAATATCTCAGCGATTGTGCTTaGTGCATGCTGCATCAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: HPTQKTLNFPAFYHNPEYLSDCA*CMLHQR Trigger: CCTCTGATGCAGCATGCACCAAGCACAATCGCTGAG...ATATTCAGGATTGTGATAGAAGGCAGGAAAGTTGAGAGTTTTCTGGGTAGGATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027146.9 ENSMUST00000190771.7 |
||
| CDS-3UTR CCA 90 bp | GTAAGTGCAGTATTTCTTCATGTGCAGTTCTTCATAGGGGTCCCCTTTGGAATGGACTGGCGGTCATCATaGCTACTTTCTGAGTCAGTA | + |
|
Preference number: 4 (lower is better) Translates to: VSAVFLHVQFFIGVPFGMDWRSS*LLSESV Trigger: TACTGACTCAGAAAGTAGCCATGATGACCGCCAGTC...CATTCCAAAGGGGACCCCTATGAAGAACTGCACATGAAGAAATACTGCACTTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027146.9 ENSMUST00000187184.7 ENSMUST00000190771.7 |
||
| 3UTR CAA 72 bp | TACAGAATTTCTGGAGTCACGTTAGGTGCCTCCTACTaGAGAGTGAAGCAAAATAAGGACTACGGAGTGCAC | + |
|
Preference number: 4 (lower is better) Translates to: YRISGVTLGASY*RVKQNKDYGVH Trigger: GTGCACTCCGTAGTCCTTATTTTGCTTCACTCTCAAGTAGGAGGCACCTAACGTGACTCCAGAAATTCTGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027146.9 |
||
| CDS-3UTR TCA 90 bp | GGAAGGTGGGACTGTAAGTGCAGTATTTCTTCATGTGCAGTTCTTCATAGGGGTTCCATGTTGTTTTCGTaGCTATCAGATGTTTCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: GRWDCKCSISSCAVLHRGSMLFS*LSDVSL Trigger: CAGGGAAACATCTGATAGTCACGAAAACAACATGGA...ACCCCTATGAAGAACTGCACATGAAGAAATACTGCACTTACAGTCCCACCTTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027146.9 ENSMUST00000187184.7 ENSMUST00000190771.7 |
||
| CDS-3UTR GCA 90 bp | TCAATTATAAATTCCGTAGGGGAGGTAAACACAGAACCCACAACAATTCAACTCAGCGATTGTGCTTGGTaGATGCTGCATCAGAGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: SIINSVGEVNTEPTTIQLSDCAW*MLHQRV Trigger: CACCCTCTGATGCAGCATGCACCAAGCACAATCGCT...GAGTTGAATTGTTGTGGGTTCTGTGTTTACCTCCCCTACGGAATTTATAATTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027146.9 ENSMUST00000190771.7 |
||
| CDS-3UTR GCA 90 bp | GTTTGGTGCATTCTCTTACATGTTAAGGAACCAGTTGGATATTTCTCCAGAAAGCCACCTCAGCGATTGTaGTTGGTGCATGCTGCATCA | + |
|
Preference number: 4 (lower is better) Translates to: VWCILLHVKEPVGYFSRKPPQRL*LVHAAS Trigger: TGATGCAGCATGCACCAAGCACAATCGCTGAGGTGG...CTTTCTGGAGAAATATCCAACTGGTTCCTTAACATGTAAGAGAATGCACCAAAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027146.9 |
||
| CDS-3UTR GCA 90 bp | TCAATTATAAATTCCGTAGGGGAGGTAAACACAGAACCCACAACAATTCAACTCTGTAGCCACAGATGTTaGATTCCAGTGGGTCCCGGT | + |
|
Preference number: 4 (lower is better) Translates to: SIINSVGEVNTEPTTIQLCSHRC*IPVGPG Trigger: ACCGGGACCCACTGGAATGCAACATCTGTGGCTACA...GAGTTGAATTGTTGTGGGTTCTGTGTTTACCTCCCCTACGGAATTTATAATTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027146.9 ENSMUST00000190771.7 |
||
| CDS-3UTR CCA 90 bp | AATCCTGAATATGAATGGCAGATCAGAATCTCTTGGATGAACCTCTATGAACTGCTCAGCGATTGTGCTTaGTGCATGCTGCATCAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: NPEYEWQIRISWMNLYELLSDCA*CMLHQR Trigger: CCTCTGATGCAGCATGCACCAAGCACAATCGCTGAG...CAGTTCATAGAGGTTCATCCAAGAGATTCTGATCTGCCATTCATATTCAGGATT 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027146.9 ENSMUST00000190771.7 |
||
| CDS-3UTR CCA 90 bp | GGGACTGTAAGTGCAGTATTTCTTCATGTGCAGTTCTTCATAGGGGTCCCCTTTATGGTGTACATGACATaGTCTAGAAAAAGGACTCGG | + |
|
Preference number: 4 (lower is better) Translates to: GTVSAVFLHVQFFIGVPFMVYMT*SRKRTR Trigger: CCGAGTCCTTTTTCTAGACCATGTCATGTACACCAT...AAAGGGGACCCCTATGAAGAACTGCACATGAAGAAATACTGCACTTACAGTCCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000027146.9 ENSMUST00000187184.7 ENSMUST00000190771.7 |
||
| CDS-3UTR CCA 90 bp | AATGACTTAGACCATTTTAAATTGCCAAGCATCCTACCCAGAAAACTCTCAACTGATGTTGCATTCCAGTaGGTCCCGGTAGCCATGGCA | + |
|
Preference number: 4 (lower is better) Translates to: NDLDHFKLPSILPRKLSTDVAFQ*VPVAMA Trigger: TGCCATGGCTACCGGGACCCACTGGAATGCAACATC...AGTTGAGAGTTTTCTGGGTAGGATGCTTGGCAATTTAAAATGGTCTAAGTCATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027146.9 ENSMUST00000190771.7 |
||
| 3UTR CAA 72 bp | CACTATGTCCACAAAGTTTATCGTAACCCACAAATCTaGAATTCAGCTTGTCCCCATTTGTCCCTGTCACAG | + |
|
Preference number: 4 (lower is better) Translates to: HYVHKVYRNPQI*NSACPHLSLSQ Trigger: CTGTGACAGGGACAAATGGGGACAAGCTGAATTCAAGATTTGTGGGTTACGATAAACTTTGTGGACATAGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027146.9 |
||
| CDS-3UTR TCA 90 bp | AATGACTTAGACCATTTTAAATTGCCAAGCATCCTACCCAGAAAACTCTCAACTGTGTTCCCCTTCGGGTaGAAGCTCATTGTCACATGT | + |
|
Preference number: 4 (lower is better) Translates to: NDLDHFKLPSILPRKLSTVFPFG*KLIVTC Trigger: ACATGTGACAATGAGCTTTCACCCGAAGGGGAACAC...AGTTGAGAGTTTTCTGGGTAGGATGCTTGGCAATTTAAAATGGTCTAAGTCATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000027146.9 ENSMUST00000190771.7 |
||
| CDS-3UTR GCA 90 bp | TCAATTATAAATTCCGTAGGGGAGGTAAACACAGAACCCACAACAATTCAACTCGCCCAATGCAAACCATaGCACAGACGTCACATTTCA | + |
|
Preference number: 4 (lower is better) Translates to: SIINSVGEVNTEPTTIQLAQCKP*HRRHIS Trigger: TGAAATGTGACGTCTGTGGCATGGTTTGCATTGGGC...GAGTTGAATTGTTGTGGGTTCTGTGTTTACCTCCCCTACGGAATTTATAATTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027146.9 ENSMUST00000190771.7 |
||
| CDS-3UTR CCA 90 bp | AATCCTGAATATGAATGGCAGATCAGAATCTCTTGGATGAACCTCTATGAACTGCTCCTTCATGTAAGCTaGGCTTTGTTTCCTCTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: NPEYEWQIRISWMNLYELLLHVS*ALFPLG Trigger: CCCAAGAGGAAACAAAGCCCAGCTTACATGAAGGAG...CAGTTCATAGAGGTTCATCCAAGAGATTCTGATCTGCCATTCATATTCAGGATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027146.9 ENSMUST00000190771.7 |
||
| 3UTR CAA 72 bp | CTCTCCAGCCTCTTCCATGAATCTTTCTACCCTAACTaGTCATTTAGGAGAGAAGATGAAGGTTTGGAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: LSSLFHESFYPN*SFRREDEGLER Trigger: TCTTTCCAAACCTTCATCTTCTCTCCTAAATGACAAGTTAGGGTAGAAAGATTCATGGAAGAGGCTGGAGAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027146.9 |
||
| CDS-3UTR GCA 90 bp | TGTAAGTGCAGTATTTCTTCATGTGCAGTTCTTCATAGGGGTCCCCTTTGGAATCACTCTTCATCACTCTaGATTTCCAGCTTTACAGAA | + |
|
Preference number: 4 (lower is better) Translates to: CKCSISSCAVLHRGPLWNHSSSL*ISSFTE Trigger: TTCTGTAAAGCTGGAAATGCAGAGTGATGAAGAGTG...ATTCCAAAGGGGACCCCTATGAAGAACTGCACATGAAGAAATACTGCACTTACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027146.9 ENSMUST00000187184.7 ENSMUST00000190771.7 |
||
| CDS-3UTR GCA 90 bp | AAACAAGCCAAGTTATCATTGAACATCCCATCCCTTTTCTTTTGTTTCTTCCTCGCGCTTTCCCATATTTaGCGTGAGCTTCTCTATGAC | + |
|
Preference number: 4 (lower is better) Translates to: KQAKLSLNIPSLFFCFFLALSHI*RELLYD Trigger: GTCATAGAGAAGCTCACGGCAAATATGGGAAAGCGC...GAGGAAGAAACAAAAGAAAAGGGATGGGATGTTCAATGATAACTTGGCTTGTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027146.9 ENSMUST00000190771.7 |
||
| CDS-3UTR CCA 90 bp | GGAAGGTGGGACTGTAAGTGCAGTATTTCTTCATGTGCAGTTCTTCATAGGGGTTCTTTCTATCCTGTTTaGATGATAGACCTGAGAATA | + |
|
Preference number: 4 (lower is better) Translates to: GRWDCKCSISSCAVLHRGSFYPV*MIDLRI Trigger: TATTCTCAGGTCTATCATCCAAACAGGATAGAAAGA...ACCCCTATGAAGAACTGCACATGAAGAAATACTGCACTTACAGTCCCACCTTCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027146.9 ENSMUST00000187184.7 ENSMUST00000190771.7 |
||
| CDS-3UTR TCA 90 bp | AATCCTGAATATGAATGGCAGATCAGAATCTCTTGGATGAACCTCTATGAACTGTCCATGTTGTTTTCGTaGCTATCAGATGTTTCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: NPEYEWQIRISWMNLYELSMLFS*LSDVSL Trigger: CAGGGAAACATCTGATAGTCACGAAAACAACATGGA...CAGTTCATAGAGGTTCATCCAAGAGATTCTGATCTGCCATTCATATTCAGGATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027146.9 ENSMUST00000190771.7 |
||
| CDS-3UTR GCA 90 bp | TCCGTAGGGGAGGTAAACACAGAACCCACAACAATTCAACTCATCCTAGTAGTTTATATAGCCATCAATTaGGTCTGTTTCCATAGTCAA | + |
|
Preference number: 4 (lower is better) Translates to: SVGEVNTEPTTIQLILVVYIAIN*VCFHSQ Trigger: TTGACTATGGAAACAGACGCAATTGATGGCTATATA...AACTACTAGGATGAGTTGAATTGTTGTGGGTTCTGTGTTTACCTCCCCTACGGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000190771.7 |
||
| CDS-3UTR CCA 90 bp | TTGCCAAGCATCCTACCCAGAAAACTCTCAACTTTCCTGCCTTCTATCACAATCATCAAAATGAATATCTaGGTAGCTGAATCGCATAAG | + |
|
Preference number: 4 (lower is better) Translates to: LPSILPRKLSTFLPSITIIKMNI*VAESHK Trigger: CTTATGCGATTCAGCTACCCAGATATTCATTTTGAT...GATTGTGATAGAAGGCAGGAAAGTTGAGAGTTTTCTGGGTAGGATGCTTGGCAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027146.9 ENSMUST00000190771.7 |
||
| CDS-3UTR CCA 90 bp | GTAAGTGCAGTATTTCTTCATGTGCAGTTCTTCATAGGGGTCCCCTTTGGAATGATCAAAATGAATATCTaGGTAGCTGAATCGCATAAG | + |
|
Preference number: 4 (lower is better) Translates to: VSAVFLHVQFFIGVPFGMIKMNI*VAESHK Trigger: CTTATGCGATTCAGCTACCCAGATATTCATTTTGAT...CATTCCAAAGGGGACCCCTATGAAGAACTGCACATGAAGAAATACTGCACTTAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000027146.9 ENSMUST00000187184.7 ENSMUST00000190771.7 |
||
| CDS-3UTR CCA 90 bp | TCAATTATAAATTCCGTAGGGGAGGTAAACACAGAACCCACAACAATTCAACTCATGGTGTACATGACATaGTCTAGAAAAAGGACTCGG | + |
|
Preference number: 4 (lower is better) Translates to: SIINSVGEVNTEPTTIQLMVYMT*SRKRTR Trigger: CCGAGTCCTTTTTCTAGACCATGTCATGTACACCAT...GAGTTGAATTGTTGTGGGTTCTGTGTTTACCTCCCCTACGGAATTTATAATTGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027146.9 ENSMUST00000190771.7 |
||
| CDS-3UTR TCA 90 bp | AATGACTTAGACCATTTTAAATTGCCAAGCATCCTACCCAGAAAACTCTCAACTTCCATGTTGTTTTCGTaGCTATCAGATGTTTCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: NDLDHFKLPSILPRKLSTSMLFS*LSDVSL Trigger: CAGGGAAACATCTGATAGTCACGAAAACAACATGGA...AGTTGAGAGTTTTCTGGGTAGGATGCTTGGCAATTTAAAATGGTCTAAGTCATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000027146.9 ENSMUST00000190771.7 |
||
| CDS-3UTR TCA 90 bp | TCAATTATAAATTCCGTAGGGGAGGTAAACACAGAACCCACAACAATTCAACTCTGTGAATGGTGTACATaGCATGGTCTAGAAAAAGGA | + |
|
Preference number: 4 (lower is better) Translates to: SIINSVGEVNTEPTTIQLCEWCT*HGLEKG Trigger: TCCTTTTTCTAGACCATGTCATGTACACCATTCACA...GAGTTGAATTGTTGTGGGTTCTGTGTTTACCTCCCCTACGGAATTTATAATTGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027146.9 ENSMUST00000190771.7 |
||
| CDS-3UTR GCA 90 bp | TCAATTATAAATTCCGTAGGGGAGGTAAACACAGAACCCACAACAATTCAACTCCACTCTTCATCACTCTaGATTTCCAGCTTTACAGAA | + |
|
Preference number: 4 (lower is better) Translates to: SIINSVGEVNTEPTTIQLHSSSL*ISSFTE Trigger: TTCTGTAAAGCTGGAAATGCAGAGTGATGAAGAGTG...GAGTTGAATTGTTGTGGGTTCTGTGTTTACCTCCCCTACGGAATTTATAATTGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027146.9 ENSMUST00000190771.7 |
||
| 3UTR CAA 72 bp | TCACAAAGTATTACAAAGTTTTTGCAGCTTCTTCAGTaGTACACACACACACACACACACACACACACACAA | + |
|
Preference number: 4 (lower is better) Translates to: SQSITKFLQLLQ*YTHTHTHTHTQ Trigger: TTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTACAACTGAAGAAGCTGCAAAAACTTTGTAATACTTTGTGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027146.9 |
||
| CDS-3UTR CCA 90 bp | AATCCTGAATATGAATGGCAGATCAGAATCTCTTGGATGAACCTCTATGAACTGTCTTTCTATCCTGTTTaGATGATAGACCTGAGAATA | + |
|
Preference number: 4 (lower is better) Translates to: NPEYEWQIRISWMNLYELSFYPV*MIDLRI Trigger: TATTCTCAGGTCTATCATCCAAACAGGATAGAAAGA...CAGTTCATAGAGGTTCATCCAAGAGATTCTGATCTGCCATTCATATTCAGGATT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027146.9 ENSMUST00000190771.7 |
||
| CDS-3UTR CCA 90 bp | AAACAAGCCAAGTTATCATTGAACATCCCATCCCTTTTCTTTTGTTTCTTCCTCATCAAAATGAATATCTaGGTAGCTGAATCGCATAAG | + |
|
Preference number: 4 (lower is better) Translates to: KQAKLSLNIPSLFFCFFLIKMNI*VAESHK Trigger: CTTATGCGATTCAGCTACCCAGATATTCATTTTGAT...GAGGAAGAAACAAAAGAAAAGGGATGGGATGTTCAATGATAACTTGGCTTGTTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000027146.9 ENSMUST00000190771.7 |
||
| 3UTR CAA 72 bp | TTTCTCACGTGCAAATTAAGAGACGACAGAAAATTCTaGACTAAGGGGTTGAGATTCATTTCTGATAAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: FLTCKLRDDRKF*TKGLRFISDKE Trigger: TTCCTTATCAGAAATGAATCTCAACCCCTTAGTCAAGAATTTTCTGTCGTCTCTTAATTTGCACGTGAGAAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027146.9 |
||
| CDS TCA 90 bp | TGGAAGGGCCGCTCACCATTCGGAAGCCGGATTCCTCCCTCGCCTTaGAGGTCCTGGACTTTCCTGTTGTCGGCCACCTCGCTGCTCTCA | + |
|
Preference number: 5 (lower is better) Translates to: WKGRSPFGSRIPPSP*RSWTFLLSATSLLS Trigger: TGAGAGCAGCGAGGTGGCCGACAACAGGAAAGTCCAGGACCTTCAAGGCGAGGGAGGAATCCGGCTTCCGAATGGTGAGCGGCCCTTCCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000187184.7 ENSMUST00000188110.7 ENSMUST00000190855.7 |
||
| CDS GCA 90 bp | CCTCGCCTTGAAGGTCCTGGACTTTCCTGTTGTCGGCCACCTCGCTaGTCTCAATTAGGGGTTCTTCTAGGCTGCTCCCCTCATCGTGGC | + |
|
Preference number: 5 (lower is better) Translates to: PRLEGPGLSCCRPPR*SQLGVLLGCSPHRG Trigger: GCCACGATGAGGGGAGCAGCCTAGAAGAACCCCTAATTGAGAGCAGCGAGGTGGCCGACAACAGGAAAGTCCAGGACCTTCAAGGCGAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000027146.9 ENSMUST00000187184.7 ENSMUST00000188110.7 ENSMUST00000190771.7 ENSMUST00000190855.7 |
||
| CDS TCA 90 bp | TCATGTGACTTGGCGAGGCGTGCTGTCCATTGGGTGTGCTTGAGGTaGGGTCAATGGCCATATTGGCGTGTTCCCCTTCGGGTGAAAGCT | + |
|
Preference number: 5 (lower is better) Translates to: SCDLARRAVHWVCLR*GQWPYWRVPLRVKA Trigger: AGCTTTCACCCGAAGGGGAACACGCCAATATGGCCATTGACCTCACCTCAAGCACACCCAATGGACAGCACGCCTCGCCAAGTCACATGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000027146.9 ENSMUST00000187184.7 ENSMUST00000188110.7 ENSMUST00000190016.2 ENSMUST00000190771.7 ENSMUST00000190855.7 ENSMUST00000191262.7 |
||
| CDS TCA 90 bp | GGCAGGGTTTCCTTGGTAGGACTGGCGGTCATCATGGCTACTTTCTaGGTCAGTAGAATCGAGGCAGCTATTGCTGGGCGAGGCCTCTCT | + |
|
Preference number: 5 (lower is better) Translates to: GRVSLVGLAVIMATF*VSRIEAAIAGRGLS Trigger: AGAGAGGCCTCGCCCAGCAATAGCTGCCTCGATTCTACTGACTCAGAAAGTAGCCATGATGACCGCCAGTCCTACCAAGGAAACCCTGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000027146.9 ENSMUST00000187184.7 ENSMUST00000188110.7 ENSMUST00000190771.7 ENSMUST00000190855.7 ENSMUST00000191262.7 |
||
| CDS CCA 90 bp | TCAGTAGAATCGAGGCAGCTATTGCTGGGCGAGGCCTCTCTTTCCTaGGGTCGACTCTTTGGTCTGATGAGAGAGATGGGGCCATCCATG | + |
|
Preference number: 5 (lower is better) Translates to: SVESRQLLLGEASLS*GRLFGLMREMGPSM Trigger: CATGGATGGCCCCATCTCTCTCATCAGACCAAAGAGTCGACCCCAGGAAAGAGAGGCCTCGCCCAGCAATAGCTGCCTCGATTCTACTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000027146.9 ENSMUST00000187184.7 ENSMUST00000188110.7 ENSMUST00000190771.7 ENSMUST00000190855.7 ENSMUST00000191262.7 |
||
| CDS-3UTR CAA 90 bp | CATCCAGAAGACAGCATGTCGCCATCCGAGGGAAGGTGGGACTGTAAGTGCAGTCCTCAGCGATTGTGCTaGGTGCATGCTGCATCAGAG | + |
|
Preference number: 5 (lower is better) Translates to: HPEDSMSPSEGRWDCKCSPQRLC*VHAASE Trigger: CTCTGATGCAGCATGCACCAAGCACAATCGCTGAGG...ACTGCACTTACAGTCCCACCTTCCCTCGGATGGCGACATGCTGTCTTCTGGATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027146.9 ENSMUST00000187184.7 ENSMUST00000190771.7 |
||
| CDS-3UTR CAA 90 bp | TGTCGCCATCCGAGGGAAGGTGGGACTGTAAGTGCAGTATTTCTTCATGTGCAGGAGCCCTTGGGGGCCTaGGTAGCATCCAAAGCCTTG | + |
|
Preference number: 5 (lower is better) Translates to: CRHPREGGTVSAVFLHVQEPLGA*VASKAL Trigger: CAAGGCTTTGGATGCTACCAAGGCCCCCAAGGGCTC...CTGCACATGAAGAAATACTGCACTTACAGTCCCACCTTCCCTCGGATGGCGACA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000027146.9 ENSMUST00000187184.7 ENSMUST00000190771.7 |
||
| CDS-3UTR CAA 90 bp | GCATGTCGCCATCCGAGGGAAGGTGGGACTGTAAGTGCAGTATTTCTTCATGTGGAGCCCTTGGGGGCCTaGGTAGCATCCAAAGCCTTG | + |
|
Preference number: 5 (lower is better) Translates to: ACRHPREGGTVSAVFLHVEPLGA*VASKAL Trigger: CAAGGCTTTGGATGCTACCAAGGCCCCCAAGGGCTC...CACATGAAGAAATACTGCACTTACAGTCCCACCTTCCCTCGGATGGCGACATGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000027146.9 ENSMUST00000187184.7 ENSMUST00000190771.7 |
||
| CDS-3UTR CAA 90 bp | TGTCGCCATCCGAGGGAAGGTGGGACTGTAAGTGCAGTATTTCTTCATGTGCAGTCCTTCAGAGAGCCCTaGGGGGCCTTGGTAGCATCC | + |
|
Preference number: 5 (lower is better) Translates to: CRHPREGGTVSAVFLHVQSFREP*GALVAS Trigger: GGATGCTACCAAGGCCCCCAAGGGCTCTCTGAAGGA...CTGCACATGAAGAAATACTGCACTTACAGTCCCACCTTCCCTCGGATGGCGACA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000027146.9 ENSMUST00000187184.7 ENSMUST00000190771.7 |
||
| CDS-3UTR CAA 90 bp | GCATGTCGCCATCCGAGGGAAGGTGGGACTGTAAGTGCAGTATTTCTTCATGTGTCCTTCAGAGAGCCCTaGGGGGCCTTGGTAGCATCC | + |
|
Preference number: 5 (lower is better) Translates to: ACRHPREGGTVSAVFLHVSFREP*GALVAS Trigger: GGATGCTACCAAGGCCCCCAAGGGCTCTCTGAAGGA...CACATGAAGAAATACTGCACTTACAGTCCCACCTTCCCTCGGATGGCGACATGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000027146.9 ENSMUST00000187184.7 ENSMUST00000190771.7 |
||
| CDS TCA 90 bp | TCACATTTCAGTTTACCATTCGGAAGCCGGATTCCTCCCTCGCCTTaGAGGTCCTGGACTTTCCTGTTGTCGGCCACCTCGCTGCTCTCA | + |
|
Preference number: 5 (lower is better) Translates to: SHFSLPFGSRIPPSP*RSWTFLLSATSLLS Trigger: TGAGAGCAGCGAGGTGGCCGACAACAGGAAAGTCCAGGACCTTCAAGGCGAGGGAGGAATCCGGCTTCCGAATGGTAAACTGAAATGTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027146.9 ENSMUST00000190771.7 |
||
| CDS-3UTR CAA 90 bp | GCATGTCGCCATCCGAGGGAAGGTGGGACTGTAAGTGCAGTATTTCTTCATGTGTGCTTGTCATGTGACTaGGCGAGGCGTGCTGTCCAT | + |
|
Preference number: 5 (lower is better) Translates to: ACRHPREGGTVSAVFLHVCLSCD*ARRAVH Trigger: ATGGACAGCACGCCTCGCCAAGTCACATGACAAGCA...CACATGAAGAAATACTGCACTTACAGTCCCACCTTCCCTCGGATGGCGACATGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027146.9 ENSMUST00000187184.7 ENSMUST00000190771.7 |
||
| CDS-3UTR CAA 90 bp | AGGTGGGACTGTAAGTGCAGTATTTCTTCATGTGCAGTTCTTCATAGGGGTCCCTCCTTCAGAGAGCCCTaGGGGGCCTTGGTAGCATCC | + |
|
Preference number: 5 (lower is better) Translates to: RWDCKCSISSCAVLHRGPSFREP*GALVAS Trigger: GGATGCTACCAAGGCCCCCAAGGGCTCTCTGAAGGA...GGGACCCCTATGAAGAACTGCACATGAAGAAATACTGCACTTACAGTCCCACCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000027146.9 ENSMUST00000187184.7 ENSMUST00000190771.7 |
||
| CDS-3UTR CAA 90 bp | GAGGGAAGGTGGGACTGTAAGTGCAGTATTTCTTCATGTGCAGTTCTTCATAGGTCCTGGACTTTCCTGTaGTCGGCCACCTCGCTGCTC | + |
|
Preference number: 5 (lower is better) Translates to: EGRWDCKCSISSCAVLHRSWTFL*SATSLL Trigger: GAGCAGCGAGGTGGCCGACAACAGGAAAGTCCAGGA...CCTATGAAGAACTGCACATGAAGAAATACTGCACTTACAGTCCCACCTTCCCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027146.9 ENSMUST00000187184.7 ENSMUST00000190771.7 |
||
| CDS-3UTR CAA 90 bp | AAGACAGCATGTCGCCATCCGAGGGAAGGTGGGACTGTAAGTGCAGTATTTCTTCCTCAGCGATTGTGCTaGGTGCATGCTGCATCAGAG | + |
|
Preference number: 5 (lower is better) Translates to: KTACRHPREGGTVSAVFLPQRLC*VHAASE Trigger: CTCTGATGCAGCATGCACCAAGCACAATCGCTGAGG...AAGAAATACTGCACTTACAGTCCCACCTTCCCTCGGATGGCGACATGCTGTCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027146.9 ENSMUST00000187184.7 ENSMUST00000190771.7 |
||
| CDS-3UTR CAA 90 bp | TGTCGCCATCCGAGGGAAGGTGGGACTGTAAGTGCAGTATTTCTTCATGTGCAGCGGCAGTGCTCACACTaGAAGGCCCTTATCTGTTCT | + |
|
Preference number: 5 (lower is better) Translates to: CRHPREGGTVSAVFLHVQRQCSH*KALICS Trigger: AGAACAGATAAGGGCCTTCAAGTGTGAGCACTGCCG...CTGCACATGAAGAAATACTGCACTTACAGTCCCACCTTCCCTCGGATGGCGACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027146.9 ENSMUST00000187184.7 ENSMUST00000190771.7 |
||
| CDS-3UTR CAA 90 bp | ATAGACAGTGACAGCATCCAGAAGACAGCATGTCGCCATCCGAGGGAAGGTGGGTTACAGAATTTGTGCTaGTCATGTGACTTGGCGAGG | + |
|
Preference number: 5 (lower is better) Translates to: IDSDSIQKTACRHPREGGLQNLC*SCDLAR Trigger: CCTCGCCAAGTCACATGACAAGCACAAATTCTGTAA...CCCACCTTCCCTCGGATGGCGACATGCTGTCTTCTGGATGCTGTCACTGTCTAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027146.9 ENSMUST00000187184.7 ENSMUST00000190771.7 |
||
| CDS-3UTR CAA 90 bp | GTAAGTGCAGTATTTCTTCATGTGCAGTTCTTCATAGGGGTCCCCTTTGGAATGTCCTGGACTTTCCTGTaGTCGGCCACCTCGCTGCTC | + |
|
Preference number: 5 (lower is better) Translates to: VSAVFLHVQFFIGVPFGMSWTFL*SATSLL Trigger: GAGCAGCGAGGTGGCCGACAACAGGAAAGTCCAGGA...CATTCCAAAGGGGACCCCTATGAAGAACTGCACATGAAGAAATACTGCACTTAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027146.9 ENSMUST00000187184.7 ENSMUST00000190771.7 |
||
| CDS-3UTR CAA 90 bp | CATCCAGAAGACAGCATGTCGCCATCCGAGGGAAGGTGGGACTGTAAGTGCAGTATGTGTCTCAGAAGGTaGCCCTTCTGGGTAAAAGAA | + |
|
Preference number: 5 (lower is better) Translates to: HPEDSMSPSEGRWDCKCSMCLRR*PFWVKE Trigger: TTCTTTTACCCAGAAGGGCAACCTTCTGAGACACAT...ACTGCACTTACAGTCCCACCTTCCCTCGGATGGCGACATGCTGTCTTCTGGATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027146.9 ENSMUST00000187184.7 ENSMUST00000190771.7 |
||
| CDS-3UTR CAA 90 bp | GGGACTGTAAGTGCAGTATTTCTTCATGTGCAGTTCTTCATAGGGGTCCCCTTTGAATCGAGGCAGCTATaGCTGGGCGAGGCCTCTCTT | + |
|
Preference number: 5 (lower is better) Translates to: GTVSAVFLHVQFFIGVPFESRQL*LGEASL Trigger: AAGAGAGGCCTCGCCCAGCAATAGCTGCCTCGATTC...AAAGGGGACCCCTATGAAGAACTGCACATGAAGAAATACTGCACTTACAGTCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027146.9 ENSMUST00000187184.7 ENSMUST00000190771.7 |
||
| CDS-3UTR CAA 90 bp | ATAGACAGTGACAGCATCCAGAAGACAGCATGTCGCCATCCGAGGGAAGGTGGGCCAGCTTTACAGAATTaGTGCTTGTCATGTGACTTG | + |
|
Preference number: 5 (lower is better) Translates to: IDSDSIQKTACRHPREGGPALQN*CLSCDL Trigger: CAAGTCACATGACAAGCACAAATTCTGTAAAGCTGG...CCCACCTTCCCTCGGATGGCGACATGCTGTCTTCTGGATGCTGTCACTGTCTAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027146.9 ENSMUST00000187184.7 ENSMUST00000190771.7 |
||
| CDS-3UTR CAA 90 bp | GGAAGGTGGGACTGTAAGTGCAGTATTTCTTCATGTGCAGTTCTTCATAGGGGTGATTCCTCCCTCGCCTaGAAGGTCCTGGACTTTCCT | + |
|
Preference number: 5 (lower is better) Translates to: GRWDCKCSISSCAVLHRGDSSLA*KVLDFP Trigger: AGGAAAGTCCAGGACCTTCAAGGCGAGGGAGGAATC...ACCCCTATGAAGAACTGCACATGAAGAAATACTGCACTTACAGTCCCACCTTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027146.9 ENSMUST00000187184.7 ENSMUST00000190771.7 |
||
| CDS-3UTR CAA 90 bp | TTGCCAAGCATCCTACCCAGAAAACTCTCAACTTTCCTGCCTTCTATCACAATCGAATCGAGGCAGCTATaGCTGGGCGAGGCCTCTCTT | + |
|
Preference number: 5 (lower is better) Translates to: LPSILPRKLSTFLPSITIESRQL*LGEASL Trigger: AAGAGAGGCCTCGCCCAGCAATAGCTGCCTCGATTC...GATTGTGATAGAAGGCAGGAAAGTTGAGAGTTTTCTGGGTAGGATGCTTGGCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027146.9 ENSMUST00000190771.7 |
||
| CDS-3UTR CAA 90 bp | GCATGTCGCCATCCGAGGGAAGGTGGGACTGTAAGTGCAGTATTTCTTCATGTGGGGCTTTGTTTCCTCTaGGGATTTAAGGCAGGGTTT | + |
|
Preference number: 5 (lower is better) Translates to: ACRHPREGGTVSAVFLHVGLCFL*GFKAGF Trigger: AAACCCTGCCTTAAATCCCAAGAGGAAACAAAGCCC...CACATGAAGAAATACTGCACTTACAGTCCCACCTTCCCTCGGATGGCGACATGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027146.9 ENSMUST00000187184.7 ENSMUST00000190771.7 |
||
| CDS-3UTR CAA 90 bp | GTAAGTGCAGTATTTCTTCATGTGCAGTTCTTCATAGGGGTCCCCTTTGGAATGTGCTTGTCATGTGACTaGGCGAGGCGTGCTGTCCAT | + |
|
Preference number: 5 (lower is better) Translates to: VSAVFLHVQFFIGVPFGMCLSCD*ARRAVH Trigger: ATGGACAGCACGCCTCGCCAAGTCACATGACAAGCA...CATTCCAAAGGGGACCCCTATGAAGAACTGCACATGAAGAAATACTGCACTTAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027146.9 ENSMUST00000187184.7 ENSMUST00000190771.7 |
||
| CDS-3UTR CAA 90 bp | GCATGTCGCCATCCGAGGGAAGGTGGGACTGTAAGTGCAGTATTTCTTCATGTGATGTGTCTCAGAAGGTaGCCCTTCTGGGTAAAAGAA | + |
|
Preference number: 5 (lower is better) Translates to: ACRHPREGGTVSAVFLHVMCLRR*PFWVKE Trigger: TTCTTTTACCCAGAAGGGCAACCTTCTGAGACACAT...CACATGAAGAAATACTGCACTTACAGTCCCACCTTCCCTCGGATGGCGACATGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027146.9 ENSMUST00000187184.7 ENSMUST00000190771.7 |
||
| CDS-3UTR CAA 90 bp | CCAGAAGACAGCATGTCGCCATCCGAGGGAAGGTGGGACTGTAAGTGCAGTATTGTCCATGATAGGCTCTaGTTCCTTACAATCTTCCAT | + |
|
Preference number: 5 (lower is better) Translates to: PEDSMSPSEGRWDCKCSIVHDRL*FLTIFH Trigger: ATGGAAGATTGTAAGGAACAAGAGCCTATCATGGAC...AATACTGCACTTACAGTCCCACCTTCCCTCGGATGGCGACATGCTGTCTTCTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027146.9 ENSMUST00000187184.7 ENSMUST00000190771.7 |
||
| CDS-3UTR CAA 90 bp | ATCCAGAAGACAGCATGTCGCCATCCGAGGGAAGGTGGGACTGTAAGTGCAGTAGTCCATGATAGGCTCTaGTTCCTTACAATCTTCCAT | + |
|
Preference number: 5 (lower is better) Translates to: IQKTACRHPREGGTVSAVVHDRL*FLTIFH Trigger: ATGGAAGATTGTAAGGAACAAGAGCCTATCATGGAC...TACTGCACTTACAGTCCCACCTTCCCTCGGATGGCGACATGCTGTCTTCTGGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027146.9 ENSMUST00000187184.7 ENSMUST00000190771.7 |
||
| CDS-3UTR CAA 90 bp | ATAGACAGTGACAGCATCCAGAAGACAGCATGTCGCCATCCGAGGGAAGGTGGGACCAGAGAAATATTGTaGTCCATGATAGGCTCTTGT | + |
|
Preference number: 5 (lower is better) Translates to: IDSDSIQKTACRHPREGGTREIL*SMIGSC Trigger: ACAAGAGCCTATCATGGACAACAATATTTCTCTGGT...CCCACCTTCCCTCGGATGGCGACATGCTGTCTTCTGGATGCTGTCACTGTCTAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027146.9 ENSMUST00000187184.7 ENSMUST00000190771.7 |
||
| CDS-3UTR CAA 90 bp | CATCCAGAAGACAGCATGTCGCCATCCGAGGGAAGGTGGGACTGTAAGTGCAGTACCAGAGAAATATTGTaGTCCATGATAGGCTCTTGT | + |
|
Preference number: 5 (lower is better) Translates to: HPEDSMSPSEGRWDCKCSTREIL*SMIGSC Trigger: ACAAGAGCCTATCATGGACAACAATATTTCTCTGGT...ACTGCACTTACAGTCCCACCTTCCCTCGGATGGCGACATGCTGTCTTCTGGATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027146.9 ENSMUST00000187184.7 ENSMUST00000190771.7 |
||
| CDS-3UTR CAA 90 bp | AATCCTGAATATGAATGGCAGATCAGAATCTCTTGGATGAACCTCTATGAACTGTCCTGGACTTTCCTGTaGTCGGCCACCTCGCTGCTC | + |
|
Preference number: 5 (lower is better) Translates to: NPEYEWQIRISWMNLYELSWTFL*SATSLL Trigger: GAGCAGCGAGGTGGCCGACAACAGGAAAGTCCAGGA...CAGTTCATAGAGGTTCATCCAAGAGATTCTGATCTGCCATTCATATTCAGGATT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027146.9 ENSMUST00000190771.7 |
||
| CDS-3UTR CAA 90 bp | AGCATCCTACCCAGAAAACTCTCAACTTTCCTGCCTTCTATCACAATCCTGAATGATTCCTCCCTCGCCTaGAAGGTCCTGGACTTTCCT | + |
|
Preference number: 5 (lower is better) Translates to: SILPRKLSTFLPSITILNDSSLA*KVLDFP Trigger: AGGAAAGTCCAGGACCTTCAAGGCGAGGGAGGAATC...ATTCAGGATTGTGATAGAAGGCAGGAAAGTTGAGAGTTTTCTGGGTAGGATGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027146.9 ENSMUST00000190771.7 |
||
| CDS-3UTR CAA 90 bp | TGTAAGTGCAGTATTTCTTCATGTGCAGTTCTTCATAGGGGTCCCCTTTGGAATGATTCCTCCCTCGCCTaGAAGGTCCTGGACTTTCCT | + |
|
Preference number: 5 (lower is better) Translates to: CKCSISSCAVLHRGPLWNDSSLA*KVLDFP Trigger: AGGAAAGTCCAGGACCTTCAAGGCGAGGGAGGAATC...ATTCCAAAGGGGACCCCTATGAAGAACTGCACATGAAGAAATACTGCACTTACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027146.9 ENSMUST00000187184.7 ENSMUST00000190771.7 |
||
| CDS-3UTR CAA 90 bp | CCAGAAGACAGCATGTCGCCATCCGAGGGAAGGTGGGACTGTAAGTGCAGTATTACCAGAGAAATATTGTaGTCCATGATAGGCTCTTGT | + |
|
Preference number: 5 (lower is better) Translates to: PEDSMSPSEGRWDCKCSITREIL*SMIGSC Trigger: ACAAGAGCCTATCATGGACAACAATATTTCTCTGGT...AATACTGCACTTACAGTCCCACCTTCCCTCGGATGGCGACATGCTGTCTTCTGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027146.9 ENSMUST00000187184.7 ENSMUST00000190771.7 |
||
| CDS-3UTR CAA 90 bp | ACAGCATGTCGCCATCCGAGGGAAGGTGGGACTGTAAGTGCAGTATTTCTTCATGGCACCAGAGAAATATaGTTGTCCATGATAGGCTCT | + |
|
Preference number: 5 (lower is better) Translates to: TACRHPREGGTVSAVFLHGTREI*LSMIGS Trigger: AGAGCCTATCATGGACAACAATATTTCTCTGGTGCC...ATGAAGAAATACTGCACTTACAGTCCCACCTTCCCTCGGATGGCGACATGCTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027146.9 ENSMUST00000187184.7 ENSMUST00000190771.7 |
||
| CDS-3UTR CAA 90 bp | ATCCAGAAGACAGCATGTCGCCATCCGAGGGAAGGTGGGACTGTAAGTGCAGTAGTCTTTCTATCCTGTTaGGATGATAGACCTGAGAAT | + |
|
Preference number: 5 (lower is better) Translates to: IQKTACRHPREGGTVSAVVFLSC*DDRPEN Trigger: ATTCTCAGGTCTATCATCCAAACAGGATAGAAAGAC...TACTGCACTTACAGTCCCACCTTCCCTCGGATGGCGACATGCTGTCTTCTGGAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027146.9 ENSMUST00000187184.7 ENSMUST00000190771.7 |
||
| CDS-3UTR CAA 90 bp | TCAATTATAAATTCCGTAGGGGAGGTAAACACAGAACCCACAACAATTCAACTCGAGCCCTTGGGGGCCTaGGTAGCATCCAAAGCCTTG | + |
|
Preference number: 5 (lower is better) Translates to: SIINSVGEVNTEPTTIQLEPLGA*VASKAL Trigger: CAAGGCTTTGGATGCTACCAAGGCCCCCAAGGGCTC...GAGTTGAATTGTTGTGGGTTCTGTGTTTACCTCCCCTACGGAATTTATAATTGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027146.9 ENSMUST00000190771.7 |
||
| CDS TCA 90 bp | AATGGGTCTTTCTATCCTGTTTGGATGATAGACCTGAGAATAAGCTaGGCTTATAACTGGGGCCACCTCAGCGATTGTGCTTGGTGCATG | + |
|
Preference number: 5 (lower is better) Translates to: NGSFYPVWMIDLRIS*AYNWGHLSDCAWCM Trigger: CATGCACCAAGCACAATCGCTGAGGTGGCCCCAGTTATAAGCTCAGCTTATTCTCAGGTCTATCATCCAAACAGGATAGAAAGACCCATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000027146.9 ENSMUST00000187184.7 ENSMUST00000188110.7 ENSMUST00000190771.7 ENSMUST00000190855.7 ENSMUST00000191262.7 |
||
| CDS-3UTR CAA 90 bp | AAGACAGCATGTCGCCATCCGAGGGAAGGTGGGACTGTAAGTGCAGTATTTCTTCCAGCTTTACAGAATTaGTGCTTGTCATGTGACTTG | + |
|
Preference number: 5 (lower is better) Translates to: KTACRHPREGGTVSAVFLPALQN*CLSCDL Trigger: CAAGTCACATGACAAGCACAAATTCTGTAAAGCTGG...AAGAAATACTGCACTTACAGTCCCACCTTCCCTCGGATGGCGACATGCTGTCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027146.9 ENSMUST00000187184.7 ENSMUST00000190771.7 |
||
| CDS-3UTR CAA 90 bp | TCAATTATAAATTCCGTAGGGGAGGTAAACACAGAACCCACAACAATTCAACTCTGCTTGTCATGTGACTaGGCGAGGCGTGCTGTCCAT | + |
|
Preference number: 5 (lower is better) Translates to: SIINSVGEVNTEPTTIQLCLSCD*ARRAVH Trigger: ATGGACAGCACGCCTCGCCAAGTCACATGACAAGCA...GAGTTGAATTGTTGTGGGTTCTGTGTTTACCTCCCCTACGGAATTTATAATTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027146.9 ENSMUST00000190771.7 |
||
| CDS-3UTR CAA 90 bp | TCCGTAGGGGAGGTAAACACAGAACCCACAACAATTCAACTCATCCTAGTAGTTTGTACCATAAGCACATaGGGCCCAATGCAAACCATG | + |
|
Preference number: 5 (lower is better) Translates to: SVGEVNTEPTTIQLILVVCTIST*GPMQTM Trigger: CATGGTTTGCATTGGGCCCAATGTGCTTATGGTACA...AACTACTAGGATGAGTTGAATTGTTGTGGGTTCTGTGTTTACCTCCCCTACGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027146.9 ENSMUST00000190771.7 |
||
| CDS-3UTR CAA 90 bp | TGGGACTGTAAGTGCAGTATTTCTTCATGTGCAGTTCTTCATAGGGGTCCCCTTATGTGTCTCAGAAGGTaGCCCTTCTGGGTAAAAGAA | + |
|
Preference number: 5 (lower is better) Translates to: WDCKCSISSCAVLHRGPLMCLRR*PFWVKE Trigger: TTCTTTTACCCAGAAGGGCAACCTTCTGAGACACAT...AAGGGGACCCCTATGAAGAACTGCACATGAAGAAATACTGCACTTACAGTCCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000027146.9 ENSMUST00000187184.7 ENSMUST00000190771.7 |
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| CDS-3UTR CAA 90 bp | GGAAGGTGGGACTGTAAGTGCAGTATTTCTTCATGTGCAGTTCTTCATAGGGGTGGCACCAGAGAAATATaGTTGTCCATGATAGGCTCT | + |
|
Preference number: 5 (lower is better) Translates to: GRWDCKCSISSCAVLHRGGTREI*LSMIGS Trigger: AGAGCCTATCATGGACAACAATATTTCTCTGGTGCC...ACCCCTATGAAGAACTGCACATGAAGAAATACTGCACTTACAGTCCCACCTTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027146.9 ENSMUST00000187184.7 ENSMUST00000190771.7 |
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| CDS-3UTR CAA 90 bp | GCCAAGCATCCTACCCAGAAAACTCTCAACTTTCCTGCCTTCTATCACAATCCTGGCACCAGAGAAATATaGTTGTCCATGATAGGCTCT | + |
|
Preference number: 5 (lower is better) Translates to: AKHPTQKTLNFPAFYHNPGTREI*LSMIGS Trigger: AGAGCCTATCATGGACAACAATATTTCTCTGGTGCC...AGGATTGTGATAGAAGGCAGGAAAGTTGAGAGTTTTCTGGGTAGGATGCTTGGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027146.9 ENSMUST00000190771.7 |
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| CDS-3UTR CAA 90 bp | TCAATTATAAATTCCGTAGGGGAGGTAAACACAGAACCCACAACAATTCAACTCCCTCAGCGATTGTGCTaGGTGCATGCTGCATCAGAG | + |
|
Preference number: 5 (lower is better) Translates to: SIINSVGEVNTEPTTIQLPQRLC*VHAASE Trigger: CTCTGATGCAGCATGCACCAAGCACAATCGCTGAGG...GAGTTGAATTGTTGTGGGTTCTGTGTTTACCTCCCCTACGGAATTTATAATTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027146.9 ENSMUST00000190771.7 |
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| CDS-3UTR CAA 90 bp | AATGACTTAGACCATTTTAAATTGCCAAGCATCCTACCCAGAAAACTCTCAACTGAATCGAGGCAGCTATaGCTGGGCGAGGCCTCTCTT | + |
|
Preference number: 5 (lower is better) Translates to: NDLDHFKLPSILPRKLSTESRQL*LGEASL Trigger: AAGAGAGGCCTCGCCCAGCAATAGCTGCCTCGATTC...AGTTGAGAGTTTTCTGGGTAGGATGCTTGGCAATTTAAAATGGTCTAAGTCATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027146.9 ENSMUST00000190771.7 |
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| CDS TCA 90 bp | CTCTTTGGTCTGATGAGAGAGATGGGGCCATCCATGTTGTTTTCGTaGCTATCAGATGTTTCCCTGCTAATGGGTCTTTCTATCCTGTTT | + |
|
Preference number: 5 (lower is better) Translates to: LFGLMREMGPSMLFS*LSDVSLLMGLSILF Trigger: AAACAGGATAGAAAGACCCATTAGCAGGGAAACATCTGATAGTCACGAAAACAACATGGATGGCCCCATCTCTCTCATCAGACCAAAGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000027146.9 ENSMUST00000187184.7 ENSMUST00000188110.7 ENSMUST00000190771.7 ENSMUST00000190855.7 ENSMUST00000191262.7 |
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| CDS-3UTR CAA 90 bp | AGGTGGGACTGTAAGTGCAGTATTTCTTCATGTGCAGTTCTTCATAGGGGTCCCGTCTTTCTATCCTGTTaGGATGATAGACCTGAGAAT | + |
|
Preference number: 5 (lower is better) Translates to: RWDCKCSISSCAVLHRGPVFLSC*DDRPEN Trigger: ATTCTCAGGTCTATCATCCAAACAGGATAGAAAGAC...GGGACCCCTATGAAGAACTGCACATGAAGAAATACTGCACTTACAGTCCCACCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027146.9 ENSMUST00000187184.7 ENSMUST00000190771.7 |
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| CDS-3UTR CAA 90 bp | AGCATCCTACCCAGAAAACTCTCAACTTTCCTGCCTTCTATCACAATCCTGAATGGGCTTTGTTTCCTCTaGGGATTTAAGGCAGGGTTT | + |
|
Preference number: 5 (lower is better) Translates to: SILPRKLSTFLPSITILNGLCFL*GFKAGF Trigger: AAACCCTGCCTTAAATCCCAAGAGGAAACAAAGCCC...ATTCAGGATTGTGATAGAAGGCAGGAAAGTTGAGAGTTTTCTGGGTAGGATGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027146.9 ENSMUST00000190771.7 |
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| CDS-3UTR CAA 90 bp | GTTTGGTGCATTCTCTTACATGTTAAGGAACCAGTTGGATATTTCTCCAGAAAGCGGCAGTGCTCACACTaGAAGGCCCTTATCTGTTCT | + |
|
Preference number: 5 (lower is better) Translates to: VWCILLHVKEPVGYFSRKRQCSH*KALICS Trigger: AGAACAGATAAGGGCCTTCAAGTGTGAGCACTGCCG...CTTTCTGGAGAAATATCCAACTGGTTCCTTAACATGTAAGAGAATGCACCAAAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027146.9 |
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| CDS-3UTR CAA 90 bp | AATCCTGAATATGAATGGCAGATCAGAATCTCTTGGATGAACCTCTATGAACTGCGGCAGTGCTCACACTaGAAGGCCCTTATCTGTTCT | + |
|
Preference number: 5 (lower is better) Translates to: NPEYEWQIRISWMNLYELRQCSH*KALICS Trigger: AGAACAGATAAGGGCCTTCAAGTGTGAGCACTGCCG...CAGTTCATAGAGGTTCATCCAAGAGATTCTGATCTGCCATTCATATTCAGGATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027146.9 ENSMUST00000190771.7 |
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| CDS-3UTR CAA 90 bp | GAGGGAAGGTGGGACTGTAAGTGCAGTATTTCTTCATGTGCAGTTCTTCATAGGGTCTTTCTATCCTGTTaGGATGATAGACCTGAGAAT | + |
|
Preference number: 5 (lower is better) Translates to: EGRWDCKCSISSCAVLHRVFLSC*DDRPEN Trigger: ATTCTCAGGTCTATCATCCAAACAGGATAGAAAGAC...CCTATGAAGAACTGCACATGAAGAAATACTGCACTTACAGTCCCACCTTCCCTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027146.9 ENSMUST00000187184.7 ENSMUST00000190771.7 |
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| CDS-3UTR CAA 90 bp | CATCCTACCCAGAAAACTCTCAACTTTCCTGCCTTCTATCACAATCCTGAATATGGGCTTTGTTTCCTCTaGGGATTTAAGGCAGGGTTT | + |
|
Preference number: 5 (lower is better) Translates to: HPTQKTLNFPAFYHNPEYGLCFL*GFKAGF Trigger: AAACCCTGCCTTAAATCCCAAGAGGAAACAAAGCCC...ATATTCAGGATTGTGATAGAAGGCAGGAAAGTTGAGAGTTTTCTGGGTAGGATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027146.9 ENSMUST00000190771.7 |
||
| CDS-3UTR CAA 90 bp | GTTTGGTGCATTCTCTTACATGTTAAGGAACCAGTTGGATATTTCTCCAGAAAGTTACAGAATTTGTGCTaGTCATGTGACTTGGCGAGG | + |
|
Preference number: 5 (lower is better) Translates to: VWCILLHVKEPVGYFSRKLQNLC*SCDLAR Trigger: CCTCGCCAAGTCACATGACAAGCACAAATTCTGTAA...CTTTCTGGAGAAATATCCAACTGGTTCCTTAACATGTAAGAGAATGCACCAAAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027146.9 |
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| CDS-3UTR CAA 90 bp | AATGACTTAGACCATTTTAAATTGCCAAGCATCCTACCCAGAAAACTCTCAACTTGTACCATAAGCACATaGGGCCCAATGCAAACCATG | + |
|
Preference number: 5 (lower is better) Translates to: NDLDHFKLPSILPRKLSTCTIST*GPMQTM Trigger: CATGGTTTGCATTGGGCCCAATGTGCTTATGGTACA...AGTTGAGAGTTTTCTGGGTAGGATGCTTGGCAATTTAAAATGGTCTAAGTCATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027146.9 ENSMUST00000190771.7 |
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| CDS-3UTR CAA 90 bp | TCAATTATAAATTCCGTAGGGGAGGTAAACACAGAACCCACAACAATTCAACTCCCAGCTTTACAGAATTaGTGCTTGTCATGTGACTTG | + |
|
Preference number: 5 (lower is better) Translates to: SIINSVGEVNTEPTTIQLPALQN*CLSCDL Trigger: CAAGTCACATGACAAGCACAAATTCTGTAAAGCTGG...GAGTTGAATTGTTGTGGGTTCTGTGTTTACCTCCCCTACGGAATTTATAATTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027146.9 ENSMUST00000190771.7 |
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| CDS-3UTR CAA 90 bp | AAACAAGCCAAGTTATCATTGAACATCCCATCCCTTTTCTTTTGTTTCTTCCTCGTCCATGATAGGCTCTaGTTCCTTACAATCTTCCAT | + |
|
Preference number: 5 (lower is better) Translates to: KQAKLSLNIPSLFFCFFLVHDRL*FLTIFH Trigger: ATGGAAGATTGTAAGGAACAAGAGCCTATCATGGAC...GAGGAAGAAACAAAAGAAAAGGGATGGGATGTTCAATGATAACTTGGCTTGTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027146.9 ENSMUST00000190771.7 |
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| CDS CAA 90 bp | GTGGAAGGGCCGCTCACCATTCGGAAGCCGGATTCCTCCCTCGCCTaGAAGGTCCTGGACTTTCCTGTTGTCGGCCACCTCGCTGCTCTC | + |
|
Preference number: 6 (lower is better) Translates to: VEGPLTIRKPDSSLA*KVLDFPVVGHLAAL Trigger: GAGAGCAGCGAGGTGGCCGACAACAGGAAAGTCCAGGACCTTCAAGGCGAGGGAGGAATCCGGCTTCCGAATGGTGAGCGGCCCTTCCAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000187184.7 ENSMUST00000188110.7 ENSMUST00000190855.7 |
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| CDS TCA 72 bp | CGCTCACCATTCGGAAGCCGGATTCCTCCCTCGCCTTaGAGGTCCTGGACTTTCCTGTTGTCGGCCACCTCG | + |
|
Preference number: 6 (lower is better) Translates to: RSPFGSRIPPSP*RSWTFLLSATS Trigger: CGAGGTGGCCGACAACAGGAAAGTCCAGGACCTTCAAGGCGAGGGAGGAATCCGGCTTCCGAATGGTGAGCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000187184.7 ENSMUST00000188110.7 ENSMUST00000190855.7 |
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| CDS CAA 72 bp | CCGCTCACCATTCGGAAGCCGGATTCCTCCCTCGCCTaGAAGGTCCTGGACTTTCCTGTTGTCGGCCACCTC | + |
|
Preference number: 6 (lower is better) Translates to: PLTIRKPDSSLA*KVLDFPVVGHL Trigger: GAGGTGGCCGACAACAGGAAAGTCCAGGACCTTCAAGGCGAGGGAGGAATCCGGCTTCCGAATGGTGAGCGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000187184.7 ENSMUST00000188110.7 ENSMUST00000190855.7 |
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| CDS TCA 72 bp | TTGGCGAGGCGTGCTGTCCATTGGGTGTGCTTGAGGTaGGGTCAATGGCCATATTGGCGTGTTCCCCTTCGG | + |
|
Preference number: 6 (lower is better) Translates to: LARRAVHWVCLR*GQWPYWRVPLR Trigger: CCGAAGGGGAACACGCCAATATGGCCATTGACCTCACCTCAAGCACACCCAATGGACAGCACGCCTCGCCAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000027146.9 ENSMUST00000187184.7 ENSMUST00000188110.7 ENSMUST00000190016.2 ENSMUST00000190771.7 ENSMUST00000190855.7 ENSMUST00000191262.7 |
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| CDS GCA 72 bp | GCTTATAACTGGGGCCACCTCAGCGATTGTGCTTGGTaGATGCTGCATCAGAGGGTGAAGGGCCTCAGCTCC | + |
|
Preference number: 6 (lower is better) Translates to: AYNWGHLSDCAW*MLHQRVKGLSS Trigger: GGAGCTGAGGCCCTTCACCCTCTGATGCAGCATGCACCAAGCACAATCGCTGAGGTGGCCCCAGTTATAAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000027146.9 ENSMUST00000187184.7 ENSMUST00000188110.7 ENSMUST00000190771.7 ENSMUST00000190855.7 ENSMUST00000191262.7 |
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| CDS CCA 72 bp | TCGAGGCAGCTATTGCTGGGCGAGGCCTCTCTTTCCTaGGGTCGACTCTTTGGTCTGATGAGAGAGATGGGG | + |
|
Preference number: 6 (lower is better) Translates to: SRQLLLGEASLS*GRLFGLMREMG Trigger: CCCCATCTCTCTCATCAGACCAAAGAGTCGACCCCAGGAAAGAGAGGCCTCGCCCAGCAATAGCTGCCTCGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000027146.9 ENSMUST00000187184.7 ENSMUST00000188110.7 ENSMUST00000190771.7 ENSMUST00000190855.7 ENSMUST00000191262.7 |
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| CDS TCA 72 bp | AGTTTACCATTCGGAAGCCGGATTCCTCCCTCGCCTTaGAGGTCCTGGACTTTCCTGTTGTCGGCCACCTCG | + |
|
Preference number: 6 (lower is better) Translates to: SLPFGSRIPPSP*RSWTFLLSATS Trigger: CGAGGTGGCCGACAACAGGAAAGTCCAGGACCTTCAAGGCGAGGGAGGAATCCGGCTTCCGAATGGTAAACT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027146.9 ENSMUST00000190771.7 |
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| CDS GCA 72 bp | GAAGGTCCTGGACTTTCCTGTTGTCGGCCACCTCGCTaGTCTCAATTAGGGGTTCTTCTAGGCTGCTCCCCT | + |
|
Preference number: 6 (lower is better) Translates to: EGPGLSCCRPPR*SQLGVLLGCSP Trigger: AGGGGAGCAGCCTAGAAGAACCCCTAATTGAGAGCAGCGAGGTGGCCGACAACAGGAAAGTCCAGGACCTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000027146.9 ENSMUST00000187184.7 ENSMUST00000188110.7 ENSMUST00000190771.7 ENSMUST00000190855.7 |
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| CDS CAA 72 bp | CAGTTTACCATTCGGAAGCCGGATTCCTCCCTCGCCTaGAAGGTCCTGGACTTTCCTGTTGTCGGCCACCTC | + |
|
Preference number: 6 (lower is better) Translates to: QFTIRKPDSSLA*KVLDFPVVGHL Trigger: GAGGTGGCCGACAACAGGAAAGTCCAGGACCTTCAAGGCGAGGGAGGAATCCGGCTTCCGAATGGTAAACTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027146.9 ENSMUST00000190771.7 |
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| CDS CAA 90 bp | GTCACATTTCAGTTTACCATTCGGAAGCCGGATTCCTCCCTCGCCTaGAAGGTCCTGGACTTTCCTGTTGTCGGCCACCTCGCTGCTCTC | + |
|
Preference number: 6 (lower is better) Translates to: VTFQFTIRKPDSSLA*KVLDFPVVGHLAAL Trigger: GAGAGCAGCGAGGTGGCCGACAACAGGAAAGTCCAGGACCTTCAAGGCGAGGGAGGAATCCGGCTTCCGAATGGTAAACTGAAATGTGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027146.9 ENSMUST00000190771.7 |
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| CDS CAA 90 bp | CGGTCATCATGGCTACTTTCTGAGTCAGTAGAATCGAGGCAGCTATaGCTGGGCGAGGCCTCTCTTTCCTGGGGTCGACTCTTTGGTCTG | + |
|
Preference number: 6 (lower is better) Translates to: RSSWLLSESVESRQL*LGEASLSWGRLFGL Trigger: CAGACCAAAGAGTCGACCCCAGGAAAGAGAGGCCTCGCCCAGCAATAGCTGCCTCGATTCTACTGACTCAGAAAGTAGCCATGATGACCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000027146.9 ENSMUST00000187184.7 ENSMUST00000188110.7 ENSMUST00000190771.7 ENSMUST00000190855.7 ENSMUST00000191262.7 |
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| CDS TCA 72 bp | TCCTTGGTAGGACTGGCGGTCATCATGGCTACTTTCTaGGTCAGTAGAATCGAGGCAGCTATTGCTGGGCGA | + |
|
Preference number: 6 (lower is better) Translates to: SLVGLAVIMATF*VSRIEAAIAGR Trigger: TCGCCCAGCAATAGCTGCCTCGATTCTACTGACTCAGAAAGTAGCCATGATGACCGCCAGTCCTACCAAGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000027146.9 ENSMUST00000187184.7 ENSMUST00000188110.7 ENSMUST00000190771.7 ENSMUST00000190855.7 ENSMUST00000191262.7 |
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| CDS CAA 72 bp | TACACTTGTGAGGTTTACCCATGCTTGTCATGTGACTaGGCGAGGCGTGCTGTCCATTGGGTGTGCTTGAGG | + |
|
Preference number: 6 (lower is better) Translates to: YTCEVYPCLSCD*ARRAVHWVCLR Trigger: CCTCAAGCACACCCAATGGACAGCACGCCTCGCCAAGTCACATGACAAGCATGGGTAAACCTCACAAGTGTA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000191262.7 |
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| CDS CAA 90 bp | GCGTGCTGTCCATTGGGTGTGCTTGAGGTGAGGTCAATGGCCATATaGGCGTGTTCCCCTTCGGGTGAAAGCTCATTGTCACATGTTATA | + |
|
Preference number: 6 (lower is better) Translates to: ACCPLGVLEVRSMAI*ACSPSGESSLSHVI Trigger: TATAACATGTGACAATGAGCTTTCACCCGAAGGGGAACACGCCAATATGGCCATTGACCTCACCTCAAGCACACCCAATGGACAGCACGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000027146.9 ENSMUST00000187184.7 ENSMUST00000188110.7 ENSMUST00000190016.2 ENSMUST00000190771.7 ENSMUST00000190855.7 ENSMUST00000191262.7 |
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| CDS GCA 72 bp | CTTCTGAGGAGTGGAGCTTTTGCGCTTTCCCATATTTaGCGTGAGCTTCTCTATGACAGCAGGTCTCTCAAA | + |
|
Preference number: 6 (lower is better) Translates to: LLRSGAFALSHI*RELLYDSRSLK Trigger: TTTGAGAGACCTGCTGTCATAGAGAAGCTCACGGCAAATATGGGAAAGCGCAAAAGCTCCACTCCTCAGAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000027146.9 ENSMUST00000187184.7 ENSMUST00000188110.7 ENSMUST00000190771.7 ENSMUST00000191262.7 |
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| CDS TCA 72 bp | GAGGTCAATGGCCATATTGGCGTGTTCCCCTTCGGGTaGAAGCTCATTGTCACATGTTATATAGCCATCAAT | + |
|
Preference number: 6 (lower is better) Translates to: EVNGHIGVFPFG*KLIVTCYIAIN Trigger: ATTGATGGCTATATAACATGTGACAATGAGCTTTCACCCGAAGGGGAACACGCCAATATGGCCATTGACCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000027146.9 ENSMUST00000187184.7 ENSMUST00000188110.7 ENSMUST00000190016.2 ENSMUST00000190771.7 ENSMUST00000190855.7 ENSMUST00000191262.7 |
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| CDS TCA 72 bp | TTCTATCCTGTTTGGATGATAGACCTGAGAATAAGCTaGGCTTATAACTGGGGCCACCTCAGCGATTGTGCT | + |
|
Preference number: 6 (lower is better) Translates to: FYPVWMIDLRIS*AYNWGHLSDCA Trigger: AGCACAATCGCTGAGGTGGCCCCAGTTATAAGCTCAGCTTATTCTCAGGTCTATCATCCAAACAGGATAGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000027146.9 ENSMUST00000187184.7 ENSMUST00000188110.7 ENSMUST00000190771.7 ENSMUST00000190855.7 ENSMUST00000191262.7 |
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| CDS CAA 90 bp | TCTCTCAAAAGGCACCAGAGAAATATTGTTGTCCATGATAGGCTCTaGTTCCTTACAATCTTCCATAGGCGGTACAGAATGGGTCCTGAG | + |
|
Preference number: 6 (lower is better) Translates to: SLKRHQRNIVVHDRL*FLTIFHRRYRMGPE Trigger: CTCAGGACCCATTCTGTACCGCCTATGGAAGATTGTAAGGAACAAGAGCCTATCATGGACAACAATATTTCTCTGGTGCCTTTTGAGAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000188110.7 |
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| CDS CAA 72 bp | AGGCACCAGAGAAATATTGTTGTCCATGATAGGCTCTaGTTCCTTACAATCTTCCATAGGCGGTACATGGTG | + |
|
Preference number: 6 (lower is better) Translates to: RHQRNIVVHDRL*FLTIFHRRYMV Trigger: CACCATGTACCGCCTATGGAAGATTGTAAGGAACAAGAGCCTATCATGGACAACAATATTTCTCTGGTGCCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000027146.9 ENSMUST00000187184.7 ENSMUST00000190771.7 ENSMUST00000191262.7 |
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| CDS CAA 90 bp | TCTCTCAAAAGGCACCAGAGAAATATTGTTGTCCATGATAGGCTCTaGTTCCTTACAATCTTCCATAGGCGGTACATGGTGACTCATGAC | + |
|
Preference number: 6 (lower is better) Translates to: SLKRHQRNIVVHDRL*FLTIFHRRYMVTHD Trigger: GTCATGAGTCACCATGTACCGCCTATGGAAGATTGTAAGGAACAAGAGCCTATCATGGACAACAATATTTCTCTGGTGCCTTTTGAGAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000027146.9 ENSMUST00000187184.7 ENSMUST00000190771.7 ENSMUST00000191262.7 |
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| CDS CAA 72 bp | AGGCACCAGAGAAATATTGTTGTCCATGATAGGCTCTaGTTCCTTACAATCTTCCATAGGCGGTACAGAATG | + |
|
Preference number: 6 (lower is better) Translates to: RHQRNIVVHDRL*FLTIFHRRYRM Trigger: CATTCTGTACCGCCTATGGAAGATTGTAAGGAACAAGAGCCTATCATGGACAACAATATTTCTCTGGTGCCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000188110.7 |
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