Pregenerated sensors for IKZF1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000018654Ensembl transcript IDs: ENSMUST00000018798.7, ENSMUST00000048122.13, ENSMUST00000065433.12, ENSMUST00000076700.11, ENSMUST00000126058.8
Found 247 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TGCCTTATATCTGGTCCTCTGGCTCACCTGCAGAGCTCCCTGAGATaGCTCAACCCCAGTGGCTGTGCTGTCTTGGGGGATTTGGAGAAT | + |
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Preference number: 1 (lower is better) Translates to: CLISGPLAHLQSSLR*LNPSGCAVLGDLEN Trigger: ATTCTCCAAATCCCCCAAGACAGCACAGCCACTGGGGTTGAGCCATCTCAGGGAGCTCTGCAGGTGAGCCAGAGGACCAGATATAAGGCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000065433.12 ENSMUST00000076700.11 |
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| 3UTR CCA 90 bp | TCCTCTGGCTCACCTGCAGAGCTCCCTGAGATGGCTCAACCCCAGTaGCTGTGCTGTCTTGGGGGATTTGGAGAATCTTTGTGGCATAAA | + |
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Preference number: 1 (lower is better) Translates to: SSGSPAELPEMAQPQ*LCCLGGFGESLWHK Trigger: TTTATGCCACAAAGATTCTCCAAATCCCCCAAGACAGCACAGCCACTGGGGTTGAGCCATCTCAGGGAGCTCTGCAGGTGAGCCAGAGGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000065433.12 ENSMUST00000076700.11 |
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| 3UTR TCA 90 bp | CCCTGTCTTGGTCTGGCTATACCAGATCCCACCTCTACCTTTCTGTaGTATGGTGGGCATTCCTCTCTGGGAACCTGTACTGGTCACACT | + |
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Preference number: 1 (lower is better) Translates to: PCLGLAIPDPTSTFL*YGGHSSLGTCTGHT Trigger: AGTGTGACCAGTACAGGTTCCCAGAGAGGAATGCCCACCATATCACAGAAAGGTAGAGGTGGGATCTGGTATAGCCAGACCAAGACAGGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065433.12 ENSMUST00000076700.11 |
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| 3UTR TCA 90 bp | GGCCTTCCTGTTGAGAATCTTCAGCTAACTGACTTGGCTTCAGCGTaGCATCCCTGTCTTGGTCTGGCTATACCAGATCCCACCTCTACC | + |
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Preference number: 1 (lower is better) Translates to: GLPVENLQLTDLASA*HPCLGLAIPDPTST Trigger: GGTAGAGGTGGGATCTGGTATAGCCAGACCAAGACAGGGATGTCACGCTGAAGCCAAGTCAGTTAGCTGAAGATTCTCAACAGGAAGGCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065433.12 ENSMUST00000076700.11 |
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| 3UTR CCA 90 bp | TGGTCTGGCTATACCAGATCCCACCTCTACCTTTCTGTGATATGGTaGGCATTCCTCTCTGGGAACCTGTACTGGTCACACTGTGTCTCC | + |
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Preference number: 1 (lower is better) Translates to: WSGYTRSHLYLSVIW*AFLSGNLYWSHCVS Trigger: GGAGACACAGTGTGACCAGTACAGGTTCCCAGAGAGGAATGCCCACCATATCACAGAAAGGTAGAGGTGGGATCTGGTATAGCCAGACCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065433.12 ENSMUST00000076700.11 |
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| 3UTR CCA 90 bp | TCTTGGTCTGGCTATACCAGATCCCACCTCTACCTTTCTGTGATATaGTGGGCATTCCTCTCTGGGAACCTGTACTGGTCACACTGTGTC | + |
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Preference number: 1 (lower is better) Translates to: SWSGYTRSHLYLSVI*WAFLSGNLYWSHCV Trigger: GACACAGTGTGACCAGTACAGGTTCCCAGAGAGGAATGCCCACCATATCACAGAAAGGTAGAGGTGGGATCTGGTATAGCCAGACCAAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065433.12 ENSMUST00000076700.11 |
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| 3UTR GCA 90 bp | GCAAATCAAACGCCAAACAACCAACATAAAAGAACAAATGCTGCCTaGAAATCCACTCCCAACATTGTCCGCTGTGGGTCCAGCTGCCGG | + |
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Preference number: 1 (lower is better) Translates to: ANQTPNNQHKRTNAA*KSTPNIVRCGSSCR Trigger: CCGGCAGCTGGACCCACAGCGGACAATGTTGGGAGTGGATTTGCAGGCAGCATTTGTTCTTTTATGTTGGTTGTTTGGCGTTTGATTTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000018798.7 ENSMUST00000065433.12 ENSMUST00000076700.11 |
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| 3UTR CCA 90 bp | CCTGAAGCCACTATTTACAATTCTGCTTTAATCTCTGAATACCACTaGTGGGTCGGGGGTAGGGTTTGGAGCCATCTTTCTTGGACCACA | + |
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Preference number: 1 (lower is better) Translates to: PEATIYNSALISEYH*WVGGRVWSHLSWTT Trigger: TGTGGTCCAAGAAAGATGGCTCCAAACCCTACCCCCGACCCACCAGTGGTATTCAGAGATTAAAGCAGAATTGTAAATAGTGGCTTCAGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000065433.12 ENSMUST00000076700.11 |
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| 3UTR TCA 90 bp | GTGCGTGCCCTTGGTGATAATGCAATGATAACATATCGATGCTCCTaGCTCTCACCAGGACAGACACACATGCACACTAAGGTAAGAATC | + |
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Preference number: 1 (lower is better) Translates to: VRALGDNAMITYRCS*LSPGQTHMHTKVRI Trigger: GATTCTTACCTTAGTGTGCATGTGTGTCTGTCCTGGTGAGAGTCAGGAGCATCGATATGTTATCATTGCATTATCACCAAGGGCACGCAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076700.11 |
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| 3UTR TCA 90 bp | CTGGTCACACTTATTCACAGTGAGTGCCATAGCACCAGATGCACATaGGCTTCCTGGGTTTGGGTGGCTGTACATCTCAAGTTTAATTGT | + |
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Preference number: 1 (lower is better) Translates to: LVTLIHSECHSTRCT*ASWVWVAVHLKFNC Trigger: ACAATTAAACTTGAGATGTACAGCCACCCAAACCCAGGAAGCTCATGTGCATCTGGTGCTATGGCACTCACTGTGAATAAGTGTGACCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076700.11 |
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| 3UTR TCA 90 bp | ACCTCAGCTACCAGTGAACAAAACTGGCTAGAAGGATGGATGTTGTaGATGTTCCTGATGCAATGCAATCCTGTCACTAACATTAAAAAC | + |
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Preference number: 1 (lower is better) Translates to: TSATSEQNWLEGWML*MFLMQCNPVTNIKN Trigger: GTTTTTAATGTTAGTGACAGGATTGCATTGCATCAGGAACATTCACAACATCCATCCTTCTAGCCAGTTTTGTTCACTGGTAGCTGAGGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000065433.12 ENSMUST00000076700.11 |
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| 3UTR TCA 90 bp | GCACATTGCACAACTTGTCCAGACACCATATTGCCATACAATATATaGCTTAATAGTCTTTCAAAGTTCAACCTTTGGCCTTGGTCTCTG | + |
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Preference number: 1 (lower is better) Translates to: AHCTTCPDTILPYNI*LNSLSKFNLWPWSL Trigger: CAGAGACCAAGGCCAAAGGTTGAACTTTGAAAGACTATTAAGTCATATATTGTATGGCAATATGGTGTCTGGACAAGTTGTGCAATGTGC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065433.12 ENSMUST00000076700.11 |
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| 3UTR GCA 90 bp | ACACATCATACAACAGAACAAACCACAGAACAAACAGTGAGGTCATaGAAAACCCTCCTTTACCAGCTAAAGAAAAACATCATCAACTTC | + |
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Preference number: 1 (lower is better) Translates to: THHTTEQTTEQTVRS*KTLLYQLKKNIINF Trigger: GAAGTTGATGATGTTTTTCTTTAGCTGGTAAAGGAGGGTTTTGCATGACCTCACTGTTTGTTCTGTGGTTTGTTCTGTTGTATGATGTGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000076700.11 |
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| 3UTR GCA 90 bp | AAATGTGACACAAGCATAAGCCCCCATCTTTATAACAAGCACCTCTaGTTCCCATTGAAGACTCTAACATTTTATTATGTGGTTGTATCT | + |
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Preference number: 1 (lower is better) Translates to: KCDTSISPHLYNKHL*FPLKTLTFYYVVVS Trigger: AGATACAACCACATAATAAAATGTTAGAGTCTTCAATGGGAAGCAGAGGTGCTTGTTATAAAGATGGGGGCTTATGCTTGTGTCACATTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000076700.11 |
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| 3UTR-3UTR CCA 90 bp | GAGATGGCTCAACCCCAGTGGCTGTGCTGTCTTGGGGGATTTGGAGAATCTTTGCAACATTGTCCGCTGTaGGTCCAGCTGCCGGGAAGG | + |
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Preference number: 2 (lower is better) Translates to: EMAQPQWLCCLGGFGESLQHCPL*VQLPGR Trigger: CCTTCCCGGCAGCTGGACCCACAGCGGACAATGTTG...CAAAGATTCTCCAAATCCCCCAAGACAGCACAGCCACTGGGGTTGAGCCATCTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000065433.12 ENSMUST00000076700.11 |
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| 3UTR-3UTR CCA 90 bp | GGGTCGGGGGTAGGGTTTGGAGCCATCTTTCTTGGACCACACTTAATGGCTCTCATCCCTGTCTTGGTCTaGCTATACCAGATCCCACCT | + |
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Preference number: 2 (lower is better) Translates to: GSGVGFGAIFLGPHLMALIPVLV*LYQIPP Trigger: AGGTGGGATCTGGTATAGCCAGACCAAGACAGGGAT...GAGAGCCATTAAGTGTGGTCCAAGAAAGATGGCTCCAAACCCTACCCCCGACCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000065433.12 ENSMUST00000076700.11 |
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| 3UTR-3UTR GCA 90 bp | GGGTCGGGGGTAGGGTTTGGAGCCATCTTTCTTGGACCACACTTAATGGCTCTCTTCCCTTCAGCACATTaGACAACTTGTCCAGACACC | + |
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Preference number: 2 (lower is better) Translates to: GSGVGFGAIFLGPHLMALFPSAH*TTCPDT Trigger: GGTGTCTGGACAAGTTGTGCAATGTGCTGAAGGGAA...GAGAGCCATTAAGTGTGGTCCAAGAAAGATGGCTCCAAACCCTACCCCCGACCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000065433.12 ENSMUST00000076700.11 |
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| 3UTR-3UTR CCA 90 bp | GCAGAGCTCCCTGAGATGGCTCAACCCCAGTGGCTGTGCTGTCTTGGGGGATTTACCAGTGAACAAAACTaGCTAGAAGGATGGATGTTG | + |
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Preference number: 2 (lower is better) Translates to: AELPEMAQPQWLCCLGGFTSEQN*LEGWML Trigger: CAACATCCATCCTTCTAGCCAGTTTTGTTCACTGGT...AAATCCCCCAAGACAGCACAGCCACTGGGGTTGAGCCATCTCAGGGAGCTCTGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000065433.12 ENSMUST00000076700.11 |
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| 3UTR CAA 90 bp | GCTCAACCCCAGTGGCTGTGCTGTCTTGGGGGATTTGGAGAATCTTaGTGGCATAAACTCTGCTTAGGGCAAGATCCACCTTACTCCTTC | + |
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Preference number: 2 (lower is better) Translates to: AQPQWLCCLGGFGES*WHKLCLGQDPPYSF Trigger: GAAGGAGTAAGGTGGATCTTGCCCTAAGCAGAGTTTATGCCACAAAGATTCTCCAAATCCCCCAAGACAGCACAGCCACTGGGGTTGAGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000065433.12 ENSMUST00000076700.11 |
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| 3UTR-3UTR GCA 90 bp | TCTTGGTCTGGCTATACCAGATCCCACCTCTACCTTTCTGTGATATGGTGGGCAAACCAGCTATCTTTGTaGTTCAGTGGGGCCTGGCTG | + |
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Preference number: 2 (lower is better) Translates to: SWSGYTRSHLYLSVIWWANQLSL*FSGAWL Trigger: CAGCCAGGCCCCACTGAAGCACAAAGATAGCTGGTT...TGCCCACCATATCACAGAAAGGTAGAGGTGGGATCTGGTATAGCCAGACCAAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065433.12 ENSMUST00000076700.11 |
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| 3UTR-3UTR CCA 90 bp | ACAAGCATAAGCCCCCATCTTTATAACAAGCACCTCTGCTTCCCATTGAAGACTCAACATTGTCCGCTGTaGGTCCAGCTGCCGGGAAGG | + |
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Preference number: 2 (lower is better) Translates to: TSISPHLYNKHLCFPLKTQHCPL*VQLPGR Trigger: CCTTCCCGGCAGCTGGACCCACAGCGGACAATGTTG...AGTCTTCAATGGGAAGCAGAGGTGCTTGTTATAAAGATGGGGGCTTATGCTTGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000076700.11 |
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| 3UTR-3UTR CCA 90 bp | ACAGGAACCAGGATAACTGAGGATGGGGCTTGGAAGAAAGCTTTGGCTTCCAAGTTATATCTGGTCCTCTaGCTCACCTGCAGAGCTCCC | + |
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Preference number: 2 (lower is better) Translates to: TGTRITEDGAWKKALASKLYLVL*LTCRAP Trigger: GGGAGCTCTGCAGGTGAGCCAGAGGACCAGATATAA...CTTGGAAGCCAAAGCTTTCTTCCAAGCCCCATCCTCAGTTATCCTGGTTCCTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065433.12 ENSMUST00000076700.11 |
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| 3UTR-3UTR CCA 90 bp | CCTGCTCTTAGGAACCCTCTTGCCTCTGATAGCTACTTAAAACACAACTTGAGGCTCGAGGCTGCCTACTaGGAAAGGTTTCAAGGGCTT | + |
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Preference number: 2 (lower is better) Translates to: PALRNPLASDSYLKHNLRLEAAY*ERFQGL Trigger: AAGCCCTTGAAACCTTTCCCAGTAGGCAGCCTCGAG...CCTCAAGTTGTGTTTTAAGTAGCTATCAGAGGCAAGAGGGTTCCTAAGAGCAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076700.11 |
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| 3UTR-3UTR TCA 90 bp | ACAGGAACCAGGATAACTGAGGATGGGGCTTGGAAGAAAGCTTTGGCTTCCAAGGAAGGATGGATGTTGTaGATGTTCCTGATGCAATGC | + |
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Preference number: 2 (lower is better) Translates to: TGTRITEDGAWKKALASKEGWML*MFLMQC Trigger: GCATTGCATCAGGAACATTCACAACATCCATCCTTC...CTTGGAAGCCAAAGCTTTCTTCCAAGCCCCATCCTCAGTTATCCTGGTTCCTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065433.12 ENSMUST00000076700.11 |
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| 3UTR-3UTR CCA 90 bp | ACAAGCATAAGCCCCCATCTTTATAACAAGCACCTCTGCTTCCCATTGAAGACTTTATATCTGGTCCTCTaGCTCACCTGCAGAGCTCCC | + |
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Preference number: 2 (lower is better) Translates to: TSISPHLYNKHLCFPLKTLYLVL*LTCRAP Trigger: GGGAGCTCTGCAGGTGAGCCAGAGGACCAGATATAA...AGTCTTCAATGGGAAGCAGAGGTGCTTGTTATAAAGATGGGGGCTTATGCTTGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000076700.11 |
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| 3UTR-3UTR CCA 90 bp | CCTGCTCTTAGGAACCCTCTTGCCTCTGATAGCTACTTAAAACACAACTTGAGGCAGCTAGAATGTTCCTaGCATCTACTGGGGAGAGAC | + |
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Preference number: 2 (lower is better) Translates to: PALRNPLASDSYLKHNLRQLECS*HLLGRD Trigger: GTCTCTCCCCAGTAGATGCCAGGAACATTCTAGCTG...CCTCAAGTTGTGTTTTAAGTAGCTATCAGAGGCAAGAGGGTTCCTAAGAGCAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000076700.11 |
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| 3UTR-3UTR TCA 90 bp | ACAAGCATAAGCCCCCATCTTTATAACAAGCACCTCTGCTTCCCATTGAAGACTCATTTCACACCTTGGTaGACTCAGTCCCTGCACTTG | + |
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Preference number: 2 (lower is better) Translates to: TSISPHLYNKHLCFPLKTHFTPW*TQSLHL Trigger: CAAGTGCAGGGACTGAGTTCACCAAGGTGTGAAATG...AGTCTTCAATGGGAAGCAGAGGTGCTTGTTATAAAGATGGGGGCTTATGCTTGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000076700.11 |
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| 3UTR-3UTR TCA 90 bp | CTGGAATCTCAGCGCACTTCATCACACAGCAAAACTCAAGACACACATCATACACCACAGAACAAACAGTaGGGTCATGCAAAACCCTCC | + |
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Preference number: 2 (lower is better) Translates to: LESQRTSSHSKTQDTHHTPQNKQ*GHAKPS Trigger: GGAGGGTTTTGCATGACCTCACTGTTTGTTCTGTGG...TGTATGATGTGTGTCTTGAGTTTTGCTGTGTGATGAAGTGCGCTGAGATTCCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000076700.11 |
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| 3UTR-3UTR GCA 90 bp | TCTTGGTCTGGCTATACCAGATCCCACCTCTACCTTTCTGTGATATGGTGGGCAAGAACAAATGCTGCCTaGAAATCCACTCCCAACATT | + |
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Preference number: 2 (lower is better) Translates to: SWSGYTRSHLYLSVIWWARTNAA*KSTPNI Trigger: AATGTTGGGAGTGGATTTGCAGGCAGCATTTGTTCT...TGCCCACCATATCACAGAAAGGTAGAGGTGGGATCTGGTATAGCCAGACCAAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065433.12 ENSMUST00000076700.11 |
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| 3UTR-3UTR CCA 90 bp | ACAGGAACCAGGATAACTGAGGATGGGGCTTGGAAGAAAGCTTTGGCTTCCAAGACCAGTGAACAAAACTaGCTAGAAGGATGGATGTTG | + |
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Preference number: 2 (lower is better) Translates to: TGTRITEDGAWKKALASKTSEQN*LEGWML Trigger: CAACATCCATCCTTCTAGCCAGTTTTGTTCACTGGT...CTTGGAAGCCAAAGCTTTCTTCCAAGCCCCATCCTCAGTTATCCTGGTTCCTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065433.12 ENSMUST00000076700.11 |
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| 3UTR-3UTR CCA 90 bp | ACAAGCATAAGCCCCCATCTTTATAACAAGCACCTCTGCTTCCCATTGAAGACTTTCAACCTTTGGCCTTaGTCTCTGCACAGGCTGATG | + |
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Preference number: 2 (lower is better) Translates to: TSISPHLYNKHLCFPLKTFNLWP*SLHRLM Trigger: CATCAGCCTGTGCAGAGACCAAGGCCAAAGGTTGAA...AGTCTTCAATGGGAAGCAGAGGTGCTTGTTATAAAGATGGGGGCTTATGCTTGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000076700.11 |
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| 3UTR-3UTR GCA 90 bp | AATGATAACATATCGATGCTCCTGACTCTCACCAGGACAGACACACATGCACACAGTGACGGATGCCTGTaGTTTTGTGGAATAACAGGT | + |
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Preference number: 2 (lower is better) Translates to: NDNISMLLTLTRTDTHAHSDGCL*FCGITG Trigger: ACCTGTTATTCCACAAAAGCACAGGCATCCGTCACT...GTGTGCATGTGTGTCTGTCCTGGTGAGAGTCAGGAGCATCGATATGTTATCATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076700.11 |
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| 3UTR-3UTR GCA 90 bp | AACGCAAATCAAACGCCAAACAACCAACATAAAAGAACAAATGCTGCCTGCAAAAACCAGCTATCTTTGTaGTTCAGTGGGGCCTGGCTG | + |
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Preference number: 2 (lower is better) Translates to: NANQTPNNQHKRTNAACKNQLSL*FSGAWL Trigger: CAGCCAGGCCCCACTGAAGCACAAAGATAGCTGGTT...TTTGCAGGCAGCATTTGTTCTTTTATGTTGGTTGTTTGGCGTTTGATTTGCGTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000018798.7 ENSMUST00000065433.12 ENSMUST00000076700.11 |
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| 3UTR-3UTR GCA 90 bp | ACAAGCATAAGCCCCCATCTTTATAACAAGCACCTCTGCTTCCCATTGAAGACTCAAACAGTGAGGTCATaGAAAACCCTCCTTTACCAG | + |
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Preference number: 2 (lower is better) Translates to: TSISPHLYNKHLCFPLKTQTVRS*KTLLYQ Trigger: CTGGTAAAGGAGGGTTTTGCATGACCTCACTGTTTG...AGTCTTCAATGGGAAGCAGAGGTGCTTGTTATAAAGATGGGGGCTTATGCTTGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000076700.11 |
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| 3UTR-3UTR CCA 90 bp | GCTCTCCAATCCCTTCCCTTCAGCACATTGCACAACTTGTCCAGACACCATATTTTTGGAGAATCTTTGTaGCATAAACTCTGCTTAGGG | + |
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Preference number: 2 (lower is better) Translates to: ALQSLPFSTLHNLSRHHIFGESL*HKLCLG Trigger: CCCTAAGCAGAGTTTATGCCACAAAGATTCTCCAAA...AATATGGTGTCTGGACAAGTTGTGCAATGTGCTGAAGGGAAGGGATTGGAGAGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000065433.12 ENSMUST00000076700.11 |
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| 3UTR-3UTR CCA 90 bp | AATGATAACATATCGATGCTCCTGACTCTCACCAGGACAGACACACATGCACACTTGATAAAGGTTGCATaGCCCCTGTCTTCTTTATGT | + |
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Preference number: 2 (lower is better) Translates to: NDNISMLLTLTRTDTHAHLIKVA*PLSSLC Trigger: ACATAAAGAAGACAGGGGCCATGCAACCTTTATCAA...GTGTGCATGTGTGTCTGTCCTGGTGAGAGTCAGGAGCATCGATATGTTATCATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076700.11 |
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| 3UTR-3UTR TCA 90 bp | ACAAGCATAAGCCCCCATCTTTATAACAAGCACCTCTGCTTCCCATTGAAGACTCCTGTCTTCTTTATGTaGAAACACATGCTACTTGGT | + |
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Preference number: 2 (lower is better) Translates to: TSISPHLYNKHLCFPLKTPVFFM*KHMLLG Trigger: ACCAAGTAGCATGTGTTTTCACATAAAGAAGACAGG...AGTCTTCAATGGGAAGCAGAGGTGCTTGTTATAAAGATGGGGGCTTATGCTTGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000076700.11 |
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| 3UTR CAA 90 bp | TGCGAAGACAGTGCTGTAAACATTTACAATTATAAGCTTTTTGTTTaGTTGAGGTGGTGGATGGTAACAACCCTATTACTGACTCTTAAG | + |
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Preference number: 2 (lower is better) Translates to: CEDSAVNIYNYKLFV*LRWWMVTTLLLTLK Trigger: CTTAAGAGTCAGTAATAGGGTTGTTACCATCCACCACCTCAACAAAACAAAAAGCTTATAATTGTAAATGTTTACAGCACTGTCTTCGCA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000065433.12 ENSMUST00000076700.11 |
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| 3UTR-3UTR CAA 90 bp | GGGTCGGGGGTAGGGTTTGGAGCCATCTTTCTTGGACCACACTTAATGGCTCTCCCTCTGGAGGTCGGGTaGATCAGGCAAATGAAGAAG | + |
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Preference number: 3 (lower is better) Translates to: GSGVGFGAIFLGPHLMALPLEVG*IRQMKK Trigger: CTTCTTCATTTGCCTGATCAACCCGACCTCCAGAGG...GAGAGCCATTAAGTGTGGTCCAAGAAAGATGGCTCCAAACCCTACCCCCGACCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000065433.12 ENSMUST00000076700.11 |
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| 3UTR TCA 72 bp | GGTCTGGCTATACCAGATCCCACCTCTACCTTTCTGTaGTATGGTGGGCATTCCTCTCTGGGAACCTGTACT | + |
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Preference number: 3 (lower is better) Translates to: GLAIPDPTSTFL*YGGHSSLGTCT Trigger: AGTACAGGTTCCCAGAGAGGAATGCCCACCATATCACAGAAAGGTAGAGGTGGGATCTGGTATAGCCAGACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065433.12 ENSMUST00000076700.11 |
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| 3UTR CCA 72 bp | GGCTATACCAGATCCCACCTCTACCTTTCTGTGATATaGTGGGCATTCCTCTCTGGGAACCTGTACTGGTCA | + |
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Preference number: 3 (lower is better) Translates to: GYTRSHLYLSVI*WAFLSGNLYWS Trigger: TGACCAGTACAGGTTCCCAGAGAGGAATGCCCACCATATCACAGAAAGGTAGAGGTGGGATCTGGTATAGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065433.12 ENSMUST00000076700.11 |
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| 3UTR CCA 72 bp | CTGACTTGGCTTCAGCGTGACATCCCTGTCTTGGTCTaGCTATACCAGATCCCACCTCTACCTTTCTGTGAT | + |
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Preference number: 3 (lower is better) Translates to: LTWLQRDIPVLV*LYQIPPLPFCD Trigger: ATCACAGAAAGGTAGAGGTGGGATCTGGTATAGCCAGACCAAGACAGGGATGTCACGCTGAAGCCAAGTCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065433.12 ENSMUST00000076700.11 |
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| 3UTR TCA 72 bp | ACTATCAGCTCGGGGAAGAACAGGAACCAGGATAACTaGGGATGGGGCTTGGAAGAAAGCTTTGGCTTCCAA | + |
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Preference number: 3 (lower is better) Translates to: TISSGKNRNQDN*GWGLEESFGFQ Trigger: TTGGAAGCCAAAGCTTTCTTCCAAGCCCCATCCTCAGTTATCCTGGTTCCTGTTCTTCCCCGAGCTGATAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065433.12 ENSMUST00000076700.11 |
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| 3UTR TCA 72 bp | CTTATTCACAGTGAGTGCCATAGCACCAGATGCACATaGGCTTCCTGGGTTTGGGTGGCTGTACATCTCAAG | + |
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Preference number: 3 (lower is better) Translates to: LIHSECHSTRCT*ASWVWVAVHLK Trigger: CTTGAGATGTACAGCCACCCAAACCCAGGAAGCTCATGTGCATCTGGTGCTATGGCACTCACTGTGAATAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076700.11 |
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| 3UTR CCA 72 bp | AGAAAAATGATCACAAGAGCACTGAGCTCGTCTTACTaGGCAACAAACCCTCTGGAGGTCGGGTTGATCAGG | + |
|
Preference number: 3 (lower is better) Translates to: RKMITRALSSSY*ATNPLEVGLIR Trigger: CCTGATCAACCCGACCTCCAGAGGGTTTGTTGCCCAGTAAGACGAGCTCAGTGCTCTTGTGATCATTTTTCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000065433.12 ENSMUST00000076700.11 |
||
| 3UTR CCA 72 bp | TATACCAGATCCCACCTCTACCTTTCTGTGATATGGTaGGCATTCCTCTCTGGGAACCTGTACTGGTCACAC | + |
|
Preference number: 3 (lower is better) Translates to: YTRSHLYLSVIW*AFLSGNLYWSH Trigger: GTGTGACCAGTACAGGTTCCCAGAGAGGAATGCCCACCATATCACAGAAAGGTAGAGGTGGGATCTGGTATA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065433.12 ENSMUST00000076700.11 |
||
| 3UTR-3UTR CAA 90 bp | ACAGGAACCAGGATAACTGAGGATGGGGCTTGGAAGAAAGCTTTGGCTTCCAAGGCTGTCTTGGGGGATTaGGAGAATCTTTGTGGCATA | + |
|
Preference number: 3 (lower is better) Translates to: TGTRITEDGAWKKALASKAVLGD*ENLCGI Trigger: TATGCCACAAAGATTCTCCAAATCCCCCAAGACAGC...CTTGGAAGCCAAAGCTTTCTTCCAAGCCCCATCCTCAGTTATCCTGGTTCCTGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000065433.12 ENSMUST00000076700.11 |
||
| 3UTR GCA 72 bp | ACGCCAAACAACCAACATAAAAGAACAAATGCTGCCTaGAAATCCACTCCCAACATTGTCCGCTGTGGGTCC | + |
|
Preference number: 3 (lower is better) Translates to: TPNNQHKRTNAA*KSTPNIVRCGS Trigger: GGACCCACAGCGGACAATGTTGGGAGTGGATTTGCAGGCAGCATTTGTTCTTTTATGTTGGTTGTTTGGCGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000018798.7 ENSMUST00000065433.12 ENSMUST00000076700.11 |
||
| 3UTR CCA 72 bp | TGGCTGTGCTGTCTTGGGGGATTTGGAGAATCTTTGTaGCATAAACTCTGCTTAGGGCAAGATCCACCTTAC | + |
|
Preference number: 3 (lower is better) Translates to: WLCCLGGFGESL*HKLCLGQDPPY Trigger: GTAAGGTGGATCTTGCCCTAAGCAGAGTTTATGCCACAAAGATTCTCCAAATCCCCCAAGACAGCACAGCCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000065433.12 ENSMUST00000076700.11 |
||
| 3UTR-3UTR CAA 90 bp | GGGTCGGGGGTAGGGTTTGGAGCCATCTTTCTTGGACCACACTTAATGGCTCTCAAAGGTTTCAAGGGCTaGTCATTTTTAGAAAACCTG | + |
|
Preference number: 3 (lower is better) Translates to: GSGVGFGAIFLGPHLMALKGFKG*SFLENL Trigger: CAGGTTTTCTAAAAATGACAAGCCCTTGAAACCTTT...GAGAGCCATTAAGTGTGGTCCAAGAAAGATGGCTCCAAACCCTACCCCCGACCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000065433.12 ENSMUST00000076700.11 |
||
| 3UTR-3UTR CAA 90 bp | GGGTCGGGGGTAGGGTTTGGAGCCATCTTTCTTGGACCACACTTAATGGCTCTCACACTTTTGAACTTTTaGAGCACATTTCACACCTTG | + |
|
Preference number: 3 (lower is better) Translates to: GSGVGFGAIFLGPHLMALTLLNF*STFHTL Trigger: CAAGGTGTGAAATGTGCTCAAAAAGTTCAAAAGTGT...GAGAGCCATTAAGTGTGGTCCAAGAAAGATGGCTCCAAACCCTACCCCCGACCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000065433.12 ENSMUST00000076700.11 |
||
| 3UTR GCA 72 bp | TGCGTACTTCAGCGTTTAGAGTTTAGATCAGTGGTTTaGTCCCTCGAACACCTGGGAAGACAGTTAGGTATC | + |
|
Preference number: 3 (lower is better) Translates to: CVLQRLEFRSVV*SLEHLGRQLGI Trigger: GATACCTAACTGTCTTCCCAGGTGTTCGAGGGAGCAAACCACTGATCTAAACTCTAAACGCTGAAGTACGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065433.12 ENSMUST00000076700.11 |
||
| 3UTR CCA 72 bp | ATAGCACCAGATGCACATGAGCTTCCTGGGTTTGGGTaGCTGTACATCTCAAGTTTAATTGTGGCTCACCAT | + |
|
Preference number: 3 (lower is better) Translates to: IAPDAHELPGFG*LYISSLIVAHH Trigger: ATGGTGAGCCACAATTAAACTTGAGATGTACAGCCACCCAAACCCAGGAAGCTCATGTGCATCTGGTGCTAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076700.11 |
||
| 3UTR-3UTR CAA 90 bp | GTCTCCAAACATTACAACATTCTAATACCTCCACTTGATAAAGGTTGCATGGCCGTTCAACCTTTGGCCTaGGTCTCTGCACAGGCTGAT | + |
|
Preference number: 3 (lower is better) Translates to: VSKHYNILIPPLDKGCMAVQPLA*VSAQAD Trigger: ATCAGCCTGTGCAGAGACCAAGGCCAAAGGTTGAAC...GGCCATGCAACCTTTATCAAGTGGAGGTATTAGAATGTTGTAATGTTTGGAGAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065433.12 ENSMUST00000076700.11 |
||
| 3UTR-3UTR CAA 90 bp | GTCTCCAAACATTACAACATTCTAATACCTCCACTTGATAAAGGTTGCATGGCCCCTCTGGAGGTCGGGTaGATCAGGCAAATGAAGAAG | + |
|
Preference number: 3 (lower is better) Translates to: VSKHYNILIPPLDKGCMAPLEVG*IRQMKK Trigger: CTTCTTCATTTGCCTGATCAACCCGACCTCCAGAGG...GGCCATGCAACCTTTATCAAGTGGAGGTATTAGAATGTTGTAATGTTTGGAGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065433.12 ENSMUST00000076700.11 |
||
| 3UTR GCA 72 bp | TCTTCAAGGCTCTCCAATCCCTTCCCTTCAGCACATTaGACAACTTGTCCAGACACCATATTGCCATACAAT | + |
|
Preference number: 3 (lower is better) Translates to: SSRLSNPFPSAH*TTCPDTILPYN Trigger: ATTGTATGGCAATATGGTGTCTGGACAAGTTGTGCAATGTGCTGAAGGGAAGGGATTGGAGAGCCTTGAAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065433.12 ENSMUST00000076700.11 |
||
| 3UTR CCA 72 bp | GGAAGAACAGGAACCAGGATAACTGAGGATGGGGCTTaGAAGAAAGCTTTGGCTTCCAAGAAGTTTTACAGT | + |
|
Preference number: 3 (lower is better) Translates to: GRTGTRITEDGA*KKALASKKFYS Trigger: ACTGTAAAACTTCTTGGAAGCCAAAGCTTTCTTCCAAGCCCCATCCTCAGTTATCCTGGTTCCTGTTCTTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065433.12 ENSMUST00000076700.11 |
||
| 3UTR CCA 72 bp | GTGATATGGTGGGCATTCCTCTCTGGGAACCTGTACTaGTCACACTGTGTCTCCAAACATTACAACATTCTA | + |
|
Preference number: 3 (lower is better) Translates to: VIWWAFLSGNLY*SHCVSKHYNIL Trigger: TAGAATGTTGTAATGTTTGGAGACACAGTGTGACCAGTACAGGTTCCCAGAGAGGAATGCCCACCATATCAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065433.12 ENSMUST00000076700.11 |
||
| 3UTR-3UTR CAA 90 bp | CACTGGAATCTCAGCGCACTTCATCACACAGCAAAACTCAAGACACACATCATACTCCCCTCTAGTTCTTaGGAATCACCTCAGAAAGTT | + |
|
Preference number: 3 (lower is better) Translates to: HWNLSALHHTAKLKTHIILPSSS*ESPQKV Trigger: AACTTTCTGAGGTGATTCCAAAGAACTAGAGGGGAG...TATGATGTGTGTCTTGAGTTTTGCTGTGTGATGAAGTGCGCTGAGATTCCAGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000076700.11 |
||
| 3UTR TCA 72 bp | CTTGGTGATAATGCAATGATAACATATCGATGCTCCTaGCTCTCACCAGGACAGACACACATGCACACTAAG | + |
|
Preference number: 3 (lower is better) Translates to: LGDNAMITYRCS*LSPGQTHMHTK Trigger: CTTAGTGTGCATGTGTGTCTGTCCTGGTGAGAGTCAGGAGCATCGATATGTTATCATTGCATTATCACCAAG 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076700.11 |
||
| 3UTR CCA 72 bp | ACTATTTACAATTCTGCTTTAATCTCTGAATACCACTaGTGGGTCGGGGGTAGGGTTTGGAGCCATCTTTCT | + |
|
Preference number: 3 (lower is better) Translates to: TIYNSALISEYH*WVGGRVWSHLS Trigger: AGAAAGATGGCTCCAAACCCTACCCCCGACCCACCAGTGGTATTCAGAGATTAAAGCAGAATTGTAAATAGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000065433.12 ENSMUST00000076700.11 |
||
| 3UTR-3UTR CAA 90 bp | ACAAGCATAAGCCCCCATCTTTATAACAAGCACCTCTGCTTCCCATTGAAGACTAGGCTAGCCTGCCTTTaGAACAAAATCTTTTCACAG | + |
|
Preference number: 3 (lower is better) Translates to: TSISPHLYNKHLCFPLKTRLACL*NKIFSQ Trigger: CTGTGAAAAGATTTTGTTCAAAAGGCAGGCTAGCCT...AGTCTTCAATGGGAAGCAGAGGTGCTTGTTATAAAGATGGGGGCTTATGCTTGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000076700.11 |
||
| 3UTR TCA 72 bp | GATAGCAAAGTCCATATCTATAATCTGAACAGGGATTaGATTGAAGTGACGGATGCCTGTGCTTTTGTGGAA | + |
|
Preference number: 3 (lower is better) Translates to: DSKVHIYNLNRD*IEVTDACAFVE Trigger: TTCCACAAAAGCACAGGCATCCGTCACTTCAATTCAATCCCTGTTCAGATTATAGATATGGACTTTGCTATC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065433.12 ENSMUST00000076700.11 |
||
| 3UTR TCA 72 bp | CTTGATAAAGGTTGCATGGCCCCTGTCTTCTTTATGTaGAAACACATGCTACTTGGTGTTTATACTAGAGAG | + |
|
Preference number: 3 (lower is better) Translates to: LDKGCMAPVFFM*KHMLLGVYTRE Trigger: CTCTCTAGTATAAACACCAAGTAGCATGTGTTTTCACATAAAGAAGACAGGGGCCATGCAACCTTTATCAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065433.12 ENSMUST00000076700.11 |
||
| 3UTR TCA 72 bp | GTGAACTCAGTCCCTGCACTTGAACTCAGACGTATTTaGAGTGTATTTGCAATGCTGATCTATAGAATTCAT | + |
|
Preference number: 3 (lower is better) Translates to: VNSVPALELRRI*SVFAMLIYRIH Trigger: ATGAATTCTATAGATCAGCATTGCAAATACACTTCAAATACGTCTGAGTTCAAGTGCAGGGACTGAGTTCAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065433.12 ENSMUST00000076700.11 |
||
| 3UTR GCA 72 bp | ACAAGCATAAGCCCCCATCTTTATAACAAGCACCTCTaGTTCCCATTGAAGACTCTAACATTTTATTATGTG | + |
|
Preference number: 3 (lower is better) Translates to: TSISPHLYNKHL*FPLKTLTFYYV Trigger: CACATAATAAAATGTTAGAGTCTTCAATGGGAAGCAGAGGTGCTTGTTATAAAGATGGGGGCTTATGCTTGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000076700.11 |
||
| 3UTR TCA 72 bp | ACAACTTGTCCAGACACCATATTGCCATACAATATATaGCTTAATAGTCTTTCAAAGTTCAACCTTTGGCCT | + |
|
Preference number: 3 (lower is better) Translates to: TTCPDTILPYNI*LNSLSKFNLWP Trigger: AGGCCAAAGGTTGAACTTTGAAAGACTATTAAGTCATATATTGTATGGCAATATGGTGTCTGGACAAGTTGT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065433.12 ENSMUST00000076700.11 |
||
| 3UTR TCA 72 bp | TTGAACTCAGACGTATTTGAAGTGTATTTGCAATGCTaGTCTATAGAATTCATCAGCATTCCAAAGACACAA | + |
|
Preference number: 3 (lower is better) Translates to: LNSDVFEVYLQC*SIEFISIPKTQ Trigger: TTGTGTCTTTGGAATGCTGATGAATTCTATAGATCAGCATTGCAAATACACTTCAAATACGTCTGAGTTCAA 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065433.12 ENSMUST00000076700.11 |
||
| CDS-3UTR TCA 90 bp | CTGCCGGGAAGGAGGCATAACCAGCTATCTTTGTGCTTCAGTGGGGCCTGGCTGTCCTCAGGTGGCCGGTaGGGGCGTCCCTCCGGCGGC | + |
|
Preference number: 4 (lower is better) Translates to: LPGRRHNQLSLCFSGAWLSSGGR*GRPSGG Trigger: GCCGCCGGAGGGACGCCCTCACCGGCCACCTGAGGA...CAGCCAGGCCCCACTGAAGCACAAAGATAGCTGGTTATGCCTCCTTCCCGGCAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000018798.7 ENSMUST00000065433.12 ENSMUST00000076700.11 |
||
| CDS-3UTR TCA 90 bp | CCTGCAAATCCACTCCCAACATTGTCCGCTGTGGGTCCAGCTGCCGGGAAGGAGCGCGCTGCTCCTCCTTaGGAGCCAGCCCATTGCGTG | + |
|
Preference number: 4 (lower is better) Translates to: PANPLPTLSAVGPAAGKERAAPP*EPAHCV Trigger: CACGCAATGGGCTGGCTCTCAAGGAGGAGCAGCGCG...CTCCTTCCCGGCAGCTGGACCCACAGCGGACAATGTTGGGAGTGGATTTGCAGG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000018798.7 ENSMUST00000065433.12 ENSMUST00000076700.11 |
||
| CDS-3UTR TCA 90 bp | ATGCTGCCTGCAAATCCACTCCCAACATTGTCCGCTGTGGGTCCAGCTGCCGGGCGCGCTGCTCCTCCTTaGGAGCCAGCCCATTGCGTG | + |
|
Preference number: 4 (lower is better) Translates to: MLPANPLPTLSAVGPAAGRAAPP*EPAHCV Trigger: CACGCAATGGGCTGGCTCTCAAGGAGGAGCAGCGCG...CCCGGCAGCTGGACCCACAGCGGACAATGTTGGGAGTGGATTTGCAGGCAGCAT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000018798.7 ENSMUST00000065433.12 ENSMUST00000076700.11 |
||
| CDS-3UTR CCA 90 bp | ATGCTGCCTGCAAATCCACTCCCAACATTGTCCGCTGTGGGTCCAGCTGCCGGGGGGTGTCTGCACCAATaGGCGCAGGGACTCAGCCCC | + |
|
Preference number: 4 (lower is better) Translates to: MLPANPLPTLSAVGPAAGGCLHQ*AQGLSP Trigger: GGGGCTGAGTCCCTGCGCCCATTGGTGCAGACACCC...CCCGGCAGCTGGACCCACAGCGGACAATGTTGGGAGTGGATTTGCAGGCAGCAT 63% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 3 transcripts: ENSMUST00000018798.7 ENSMUST00000065433.12 ENSMUST00000076700.11 |
||
| CDS-3UTR TCA 90 bp | ACAGGAACCAGGATAACTGAGGATGGGGCTTGGAAGAAAGCTTTGGCTTCCAAGTCCTCAGGTGGCCGGTaGGGGCGTCCCTCCGGCGGC | + |
|
Preference number: 4 (lower is better) Translates to: TGTRITEDGAWKKALASKSSGGR*GRPSGG Trigger: GCCGCCGGAGGGACGCCCTCACCGGCCACCTGAGGA...CTTGGAAGCCAAAGCTTTCTTCCAAGCCCCATCCTCAGTTATCCTGGTTCCTGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065433.12 ENSMUST00000076700.11 |
||
| CDS-3UTR TCA 90 bp | CTGCCGGGAAGGAGGCATAACCAGCTATCTTTGTGCTTCAGTGGGGCCTGGCTGGGCCTCTCGCTCCGATaGCACAGACTTGGCCTTGGA | + |
|
Preference number: 4 (lower is better) Translates to: LPGRRHNQLSLCFSGAWLGLSLR*HRLGLG Trigger: TCCAAGGCCAAGTCTGTGTCATCGGAGCGAGAGGCC...CAGCCAGGCCCCACTGAAGCACAAAGATAGCTGGTTATGCCTCCTTCCCGGCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000018798.7 ENSMUST00000065433.12 ENSMUST00000076700.11 |
||
| CDS-3UTR CCA 90 bp | GCTGCCTGCAAATCCACTCCCAACATTGTCCGCTGTGGGTCCAGCTGCCGGGAAAAGGAGGCCCCACACTaGTTGCACTGGAAAGGCCGT | + |
|
Preference number: 4 (lower is better) Translates to: AACKSTPNIVRCGSSCREKEAPH*LHWKGR Trigger: ACGGCCTTTCCAGTGCAACCAGTGTGGGGCCTCCTT...TTCCCGGCAGCTGGACCCACAGCGGACAATGTTGGGAGTGGATTTGCAGGCAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000018798.7 ENSMUST00000065433.12 ENSMUST00000076700.11 |
||
| CDS-3UTR CCA 90 bp | ATGCTGCCTGCAAATCCACTCCCAACATTGTCCGCTGTGGGTCCAGCTGCCGGGAAGGAGGCCCCACACTaGTTGCACTGGAAAGGCCGT | + |
|
Preference number: 4 (lower is better) Translates to: MLPANPLPTLSAVGPAAGKEAPH*LHWKGR Trigger: ACGGCCTTTCCAGTGCAACCAGTGTGGGGCCTCCTT...CCCGGCAGCTGGACCCACAGCGGACAATGTTGGGAGTGGATTTGCAGGCAGCAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000018798.7 ENSMUST00000065433.12 ENSMUST00000076700.11 |
||
| CDS-3UTR CCA 90 bp | TGCTGCCTGCAAATCCACTCCCAACATTGTCCGCTGTGGGTCCAGCTGCCGGGACATGGAGCTGATGACTaGCACCACCTCGGAGCTACC | + |
|
Preference number: 4 (lower is better) Translates to: CCLQIHSQHCPLWVQLPGHGADD*HHLGAT Trigger: GGTAGCTCCGAGGTGGTGCCAGTCATCAGCTCCATG...TCCCGGCAGCTGGACCCACAGCGGACAATGTTGGGAGTGGATTTGCAGGCAGCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000018798.7 ENSMUST00000065433.12 ENSMUST00000076700.11 |
||
| CDS-3UTR CCA 90 bp | GCTGCCTGCAAATCCACTCCCAACATTGTCCGCTGTGGGTCCAGCTGCCGGGAACATGGAGCTGATGACTaGCACCACCTCGGAGCTACC | + |
|
Preference number: 4 (lower is better) Translates to: AACKSTPNIVRCGSSCREHGADD*HHLGAT Trigger: GGTAGCTCCGAGGTGGTGCCAGTCATCAGCTCCATG...TTCCCGGCAGCTGGACCCACAGCGGACAATGTTGGGAGTGGATTTGCAGGCAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000018798.7 ENSMUST00000065433.12 ENSMUST00000076700.11 |
||
| CDS-3UTR CCA 90 bp | ATGCTGCCTGCAAATCCACTCCCAACATTGTCCGCTGTGGGTCCAGCTGCCGGGCATGGAGCTGATGACTaGCACCACCTCGGAGCTACC | + |
|
Preference number: 4 (lower is better) Translates to: MLPANPLPTLSAVGPAAGHGADD*HHLGAT Trigger: GGTAGCTCCGAGGTGGTGCCAGTCATCAGCTCCATG...CCCGGCAGCTGGACCCACAGCGGACAATGTTGGGAGTGGATTTGCAGGCAGCAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000018798.7 ENSMUST00000065433.12 ENSMUST00000076700.11 |
||
| CDS-3UTR CCA 90 bp | ATGCTGCCTGCAAATCCACTCCCAACATTGTCCGCTGTGGGTCCAGCTGCCGGGAAAGCCGAGCTGCCTTaGTCCCTGTGGGAGCCATTC | + |
|
Preference number: 4 (lower is better) Translates to: MLPANPLPTLSAVGPAAGKAELP*SLWEPF Trigger: GAATGGCTCCCACAGGGACCAAGGCAGCTCGGCTTT...CCCGGCAGCTGGACCCACAGCGGACAATGTTGGGAGTGGATTTGCAGGCAGCAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065433.12 ENSMUST00000076700.11 |
||
| CDS-3UTR CCA 90 bp | CCTGCAAATCCACTCCCAACATTGTCCGCTGTGGGTCCAGCTGCCGGGAAGGAGAAAGCCGAGCTGCCTTaGTCCCTGTGGGAGCCATTC | + |
|
Preference number: 4 (lower is better) Translates to: PANPLPTLSAVGPAAGKEKAELP*SLWEPF Trigger: GAATGGCTCCCACAGGGACCAAGGCAGCTCGGCTTT...CTCCTTCCCGGCAGCTGGACCCACAGCGGACAATGTTGGGAGTGGATTTGCAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065433.12 ENSMUST00000076700.11 |
||
| CDS-3UTR TCA 90 bp | ATGCTGCCTGCAAATCCACTCCCAACATTGTCCGCTGTGGGTCCAGCTGCCGGGCCGCGTGATATGGGATaGGAACTCGTACCTGTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: MLPANPLPTLSAVGPAAGPRDMG*ELVPVL Trigger: CAGGACAGGTACGAGTTCTCATCCCATATCACGCGG...CCCGGCAGCTGGACCCACAGCGGACAATGTTGGGAGTGGATTTGCAGGCAGCAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000018798.7 ENSMUST00000065433.12 ENSMUST00000076700.11 |
||
| CDS-3UTR CCA 90 bp | ATGCTGCCTGCAAATCCACTCCCAACATTGTCCGCTGTGGGTCCAGCTGCCGGGCCGATGACACAGACTTaGCCTTGGACAGCAGCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: MLPANPLPTLSAVGPAAGPMTQT*PWTAAA Trigger: TGCTGCTGCTGTCCAAGGCCAAGTCTGTGTCATCGG...CCCGGCAGCTGGACCCACAGCGGACAATGTTGGGAGTGGATTTGCAGGCAGCAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000018798.7 ENSMUST00000065433.12 ENSMUST00000076700.11 |
||
| CDS-3UTR TCA 90 bp | ATGCTGCCTGCAAATCCACTCCCAACATTGTCCGCTGTGGGTCCAGCTGCCGGGGGGGCTCTCCTTTCCTaGAACTTGGGACATGTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: MLPANPLPTLSAVGPAAGGALLS*NLGHVL Trigger: CAAGACATGTCCCAAGTTTCAGGAAAGGAGAGCCCC...CCCGGCAGCTGGACCCACAGCGGACAATGTTGGGAGTGGATTTGCAGGCAGCAT 58% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt. Matches the following 3 transcripts: ENSMUST00000018798.7 ENSMUST00000065433.12 ENSMUST00000076700.11 |
||
| CDS-3UTR TCA 90 bp | CTTAATAGTCTTTCAAAGTTCAACCTTTGGCCTTGGTCTCTGCACAGGCTGATGTCCTCAGGTGGCCGGTaGGGGCGTCCCTCCGGCGGC | + |
|
Preference number: 4 (lower is better) Translates to: LNSLSKFNLWPWSLHRLMSSGGR*GRPSGG Trigger: GCCGCCGGAGGGACGCCCTCACCGGCCACCTGAGGA...CATCAGCCTGTGCAGAGACCAAGGCCAAAGGTTGAACTTTGAAAGACTATTAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065433.12 ENSMUST00000076700.11 |
||
| CDS-3UTR TCA 90 bp | AATGCTGCCTGCAAATCCACTCCCAACATTGTCCGCTGTGGGTCCAGCTGCCGGAATGCCTCCAACTCCTaGCAAAGCCGAGCTGCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: NAACKSTPNIVRCGSSCRNASNS*QSRAAL Trigger: CAAGGCAGCTCGGCTTTGTCAGGAGTTGGAGGCATT...CCGGCAGCTGGACCCACAGCGGACAATGTTGGGAGTGGATTTGCAGGCAGCATT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065433.12 ENSMUST00000076700.11 |
||
| CDS-3UTR GCA 90 bp | CTGCCGGGAAGGAGGCATAACCAGCTATCTTTGTGCTTCAGTGGGGCCTGGCTGTGCCCGGAAGGCCCATaGTTTCCAAGTAGTTGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: LPGRRHNQLSLCFSGAWLCPEGP*FPSSCG Trigger: GCCACAACTACTTGGAAAGCATGGGCCTTCCGGGCA...CAGCCAGGCCCCACTGAAGCACAAAGATAGCTGGTTATGCCTCCTTCCCGGCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000018798.7 ENSMUST00000065433.12 ENSMUST00000076700.11 |
||
| CDS-3UTR GCA 90 bp | TGCTGCCTGCAAATCCACTCCCAACATTGTCCGCTGTGGGTCCAGCTGCCGGGAGACAAGGGACCTCTCTaGTCCTATCTTGCACAGGTC | + |
|
Preference number: 4 (lower is better) Translates to: CCLQIHSQHCPLWVQLPGDKGPL*SYLAQV Trigger: GACCTGTGCAAGATAGGAGCAGAGAGGTCCCTTGTC...TCCCGGCAGCTGGACCCACAGCGGACAATGTTGGGAGTGGATTTGCAGGCAGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000018798.7 ENSMUST00000065433.12 ENSMUST00000076700.11 |
||
| CDS-3UTR GCA 90 bp | ATGCTGCCTGCAAATCCACTCCCAACATTGTCCGCTGTGGGTCCAGCTGCCGGGTACGTTTGGCGACATTaGTTGCCAGCCTGTCCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: MLPANPLPTLSAVGPAAGYVWRH*LPACPG Trigger: TCCTGGACAGGCTGGCAAGCAATGTCGCCAAACGTA...CCCGGCAGCTGGACCCACAGCGGACAATGTTGGGAGTGGATTTGCAGGCAGCAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000018798.7 ENSMUST00000065433.12 ENSMUST00000076700.11 |
||
| CDS-3UTR CCA 90 bp | CCTGCAAATCCACTCCCAACATTGTCCGCTGTGGGTCCAGCTGCCGGGAAGGAGTGCCTCGATCACTCTTaGAGTTCTGCTGTGCTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: PANPLPTLSAVGPAAGKECLDHS*SSAVLQ Trigger: CTGGAGCACAGCAGAACTCCAAGAGTGATCGAGGCA...CTCCTTCCCGGCAGCTGGACCCACAGCGGACAATGTTGGGAGTGGATTTGCAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000018798.7 ENSMUST00000065433.12 ENSMUST00000076700.11 |
||
| CDS-3UTR CCA 90 bp | AATGCTGCCTGCAAATCCACTCCCAACATTGTCCGCTGTGGGTCCAGCTGCCGGGGGGGCTTGTGCAGCTaGTACATGGAGCTGATGACT | + |
|
Preference number: 4 (lower is better) Translates to: NAACKSTPNIVRCGSSCRGGLCS*YMELMT Trigger: AGTCATCAGCTCCATGTACCAGCTGCACAAGCCCCC...CCGGCAGCTGGACCCACAGCGGACAATGTTGGGAGTGGATTTGCAGGCAGCATT 58% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt. Matches the following 3 transcripts: ENSMUST00000018798.7 ENSMUST00000065433.12 ENSMUST00000076700.11 |
||
| CDS-3UTR TCA 90 bp | AGATGGCTCAACCCCAGTGGCTGTGCTGTCTTGGGGGATTTGGAGAATCTTTGTCACCCGAGTGCAGCTTaGTGTGCCGCAGGAGGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: RWLNPSGCAVLGDLENLCHPSAA*CAAGGC Trigger: GCAACCTCCTGCGGCACATCAAGCTGCACTCGGGTG...ACAAAGATTCTCCAAATCCCCCAAGACAGCACAGCCACTGGGGTTGAGCCATCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000065433.12 ENSMUST00000076700.11 |
||
| CDS-3UTR GCA 90 bp | CAAATGCTGCCTGCAAATCCACTCCCAACATTGTCCGCTGTGGGTCCAGCTGCCTTGTACACCTTCAGCTaGTCGCCACTCGTGCTGACC | + |
|
Preference number: 4 (lower is better) Translates to: QMLPANPLPTLSAVGPAALYTFS*SPLVLT Trigger: GGTCAGCACGAGTGGCGAGCAGCTGAAGGTGTACAA...GGCAGCTGGACCCACAGCGGACAATGTTGGGAGTGGATTTGCAGGCAGCATTTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000018798.7 ENSMUST00000065433.12 ENSMUST00000076700.11 |
||
| CDS-3UTR CCA 90 bp | AATGCTGCCTGCAAATCCACTCCCAACATTGTCCGCTGTGGGTCCAGCTGCCGGTGCCTCGATCACTCTTaGAGTTCTGCTGTGCTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: NAACKSTPNIVRCGSSCRCLDHS*SSAVLQ Trigger: CTGGAGCACAGCAGAACTCCAAGAGTGATCGAGGCA...CCGGCAGCTGGACCCACAGCGGACAATGTTGGGAGTGGATTTGCAGGCAGCATT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000018798.7 ENSMUST00000065433.12 ENSMUST00000076700.11 |
||
| CDS-3UTR CCA 90 bp | GCTGCCTGCAAATCCACTCCCAACATTGTCCGCTGTGGGTCCAGCTGCCGGGAATGCTCTCTGTATCTGTaGAGTCTTGGCAGCTGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: AACKSTPNIVRCGSSCRECSLYL*SLGSCC Trigger: GCAACAGCTGCCAAGACTCCACAGATACAGAGAGCA...TTCCCGGCAGCTGGACCCACAGCGGACAATGTTGGGAGTGGATTTGCAGGCAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000018798.7 ENSMUST00000065433.12 ENSMUST00000076700.11 |
||
| CDS-3UTR CCA 90 bp | CCTGCAAATCCACTCCCAACATTGTCCGCTGTGGGTCCAGCTGCCGGGAAGGAGTGCTCTCTGTATCTGTaGAGTCTTGGCAGCTGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: PANPLPTLSAVGPAAGKECSLYL*SLGSCC Trigger: GCAACAGCTGCCAAGACTCCACAGATACAGAGAGCA...CTCCTTCCCGGCAGCTGGACCCACAGCGGACAATGTTGGGAGTGGATTTGCAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000018798.7 ENSMUST00000065433.12 ENSMUST00000076700.11 |
||
| CDS-3UTR TCA 90 bp | CCTGCAAATCCACTCCCAACATTGTCCGCTGTGGGTCCAGCTGCCGGGAAGGAGCAATATCCACATTTGTaGGGCTTACCAACGGAGTGC | + |
|
Preference number: 4 (lower is better) Translates to: PANPLPTLSAVGPAAGKEQYPHL*GLPTEC Trigger: GCACTCCGTTGGTAAGCCTCACAAATGTGGATATTG...CTCCTTCCCGGCAGCTGGACCCACAGCGGACAATGTTGGGAGTGGATTTGCAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000018798.7 ENSMUST00000065433.12 ENSMUST00000076700.11 |
||
| CDS-3UTR GCA 90 bp | ATGCTGCCTGCAAATCCACTCCCAACATTGTCCGCTGTGGGTCCAGCTGCCGGGCTTGCACAGGTCTTCTaGCATCTCGTTGTGGTTAGT | + |
|
Preference number: 4 (lower is better) Translates to: MLPANPLPTLSAVGPAAGLAQVF*HLVVVS Trigger: ACTAACCACAACGAGATGGCAGAAGACCTGTGCAAG...CCCGGCAGCTGGACCCACAGCGGACAATGTTGGGAGTGGATTTGCAGGCAGCAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000018798.7 ENSMUST00000065433.12 ENSMUST00000076700.11 |
||
| CDS-3UTR GCA 90 bp | CAAATGCTGCCTGCAAATCCACTCCCAACATTGTCCGCTGTGGGTCCAGCTGCCAGCCCATTGCGTGCATaGGGGTTGATGTGGTTGGTT | + |
|
Preference number: 4 (lower is better) Translates to: QMLPANPLPTLSAVGPAASPLRA*GLMWLV Trigger: AACCAACCACATCAACCCGCATGCACGCAATGGGCT...GGCAGCTGGACCCACAGCGGACAATGTTGGGAGTGGATTTGCAGGCAGCATTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000018798.7 ENSMUST00000065433.12 ENSMUST00000076700.11 |
||
| CDS-3UTR CCA 90 bp | TGTGGGTCCAGCTGCCGGGAAGGAGGCATAACCAGCTATCTTTGTGCTTCAGTGAGGAGGTTGCCTTTCTaGGTAAAGGAGGCCCCACAC | + |
|
Preference number: 4 (lower is better) Translates to: CGSSCREGGITSYLCASVRRLPF*VKEAPH Trigger: GTGTGGGGCCTCCTTTACCCAGAAAGGCAACCTCCT...CACTGAAGCACAAAGATAGCTGGTTATGCCTCCTTCCCGGCAGCTGGACCCACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000018798.7 ENSMUST00000065433.12 ENSMUST00000076700.11 |
||
| CDS-3UTR CCA 90 bp | GCTCTCCAATCCCTTCCCTTCAGCACATTGCACAACTTGTCCAGACACCATATTGGGTGTCTGCACCAATaGGCGCAGGGACTCAGCCCC | + |
|
Preference number: 4 (lower is better) Translates to: ALQSLPFSTLHNLSRHHIGCLHQ*AQGLSP Trigger: GGGGCTGAGTCCCTGCGCCCATTGGTGCAGACACCC...AATATGGTGTCTGGACAAGTTGTGCAATGTGCTGAAGGGAAGGGATTGGAGAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065433.12 ENSMUST00000076700.11 |
||
| CDS-3UTR CCA 90 bp | TGTGGGTCCAGCTGCCGGGAAGGAGGCATAACCAGCTATCTTTGTGCTTCAGTGGGGGGCTTGTGCAGCTaGTACATGGAGCTGATGACT | + |
|
Preference number: 4 (lower is better) Translates to: CGSSCREGGITSYLCASVGGLCS*YMELMT Trigger: AGTCATCAGCTCCATGTACCAGCTGCACAAGCCCCC...CACTGAAGCACAAAGATAGCTGGTTATGCCTCCTTCCCGGCAGCTGGACCCACA 56% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 3 transcripts: ENSMUST00000018798.7 ENSMUST00000065433.12 ENSMUST00000076700.11 |
||
| CDS-3UTR TCA 90 bp | GCTGCCTGCAAATCCACTCCCAACATTGTCCGCTGTGGGTCCAGCTGCCGGGAATGTGAATGGTATACATaGCGTGATCCAGGAAGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: AACKSTPNIVRCGSSCRECEWYT*RDPGRA Trigger: TGCTCTTCCTGGATCACGTCATGTATACCATTCACA...TTCCCGGCAGCTGGACCCACAGCGGACAATGTTGGGAGTGGATTTGCAGGCAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000018798.7 ENSMUST00000065433.12 ENSMUST00000076700.11 |
||
| CDS-3UTR CCA 90 bp | TGTGGGTCCAGCTGCCGGGAAGGAGGCATAACCAGCTATCTTTGTGCTTCAGTGGCATTGTTGATGGCCTaGTCCATCACGTGGGATGTC | + |
|
Preference number: 4 (lower is better) Translates to: CGSSCREGGITSYLCASVALLMA*SITWDV Trigger: GACATCCCACGTGATGGACCAGGCCATCAACAATGC...CACTGAAGCACAAAGATAGCTGGTTATGCCTCCTTCCCGGCAGCTGGACCCACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000018798.7 ENSMUST00000065433.12 ENSMUST00000076700.11 |
||
| CDS-3UTR TCA 90 bp | GCTGCCTGCAAATCCACTCCCAACATTGTCCGCTGTGGGTCCAGCTGCCGGGAATCTCCAAGAAATTTCTaGGGCATAGAGCTCTTACGT | + |
|
Preference number: 4 (lower is better) Translates to: AACKSTPNIVRCGSSCRESPRNF*GIELLR Trigger: ACGTAAGAGCTCTATGCCTCAGAAATTTCTTGGAGA...TTCCCGGCAGCTGGACCCACAGCGGACAATGTTGGGAGTGGATTTGCAGGCAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000018798.7 ENSMUST00000065433.12 ENSMUST00000076700.11 |
||
| CDS-3UTR TCA 90 bp | ATGCTGCCTGCAAATCCACTCCCAACATTGTCCGCTGTGGGTCCAGCTGCCGGGTCTCCAAGAAATTTCTaGGGCATAGAGCTCTTACGT | + |
|
Preference number: 4 (lower is better) Translates to: MLPANPLPTLSAVGPAAGSPRNF*GIELLR Trigger: ACGTAAGAGCTCTATGCCTCAGAAATTTCTTGGAGA...CCCGGCAGCTGGACCCACAGCGGACAATGTTGGGAGTGGATTTGCAGGCAGCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000018798.7 ENSMUST00000065433.12 ENSMUST00000076700.11 |
||
| CDS-3UTR CCA 90 bp | TCTTGGTCTGGCTATACCAGATCCCACCTCTACCTTTCTGTGATATGGTGGGCAAAGGAGGCCCCACACTaGTTGCACTGGAAAGGCCGT | + |
|
Preference number: 4 (lower is better) Translates to: SWSGYTRSHLYLSVIWWAKEAPH*LHWKGR Trigger: ACGGCCTTTCCAGTGCAACCAGTGTGGGGCCTCCTT...TGCCCACCATATCACAGAAAGGTAGAGGTGGGATCTGGTATAGCCAGACCAAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065433.12 ENSMUST00000076700.11 |
||
| CDS-3UTR TCA 90 bp | CAAATGCTGCCTGCAAATCCACTCCCAACATTGTCCGCTGTGGGTCCAGCTGCCTGTGAATGGTATACATaGCGTGATCCAGGAAGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: QMLPANPLPTLSAVGPAACEWYT*RDPGRA Trigger: TGCTCTTCCTGGATCACGTCATGTATACCATTCACA...GGCAGCTGGACCCACAGCGGACAATGTTGGGAGTGGATTTGCAGGCAGCATTTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000018798.7 ENSMUST00000065433.12 ENSMUST00000076700.11 |
||
| CDS-3UTR GCA 90 bp | ACAGGAACCAGGATAACTGAGGATGGGGCTTGGAAGAAAGCTTTGGCTTCCAAGTGCCCGGAAGGCCCATaGTTTCCAAGTAGTTGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: TGTRITEDGAWKKALASKCPEGP*FPSSCG Trigger: GCCACAACTACTTGGAAAGCATGGGCCTTCCGGGCA...CTTGGAAGCCAAAGCTTTCTTCCAAGCCCCATCCTCAGTTATCCTGGTTCCTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065433.12 ENSMUST00000076700.11 |
||
| CDS-3UTR CCA 90 bp | ATGCTGCCTGCAAATCCACTCCCAACATTGTCCGCTGTGGGTCCAGCTGCCGGGTCTGCCATCTCGTTGTaGTTAGTTTCTTCCTTAATG | + |
|
Preference number: 4 (lower is better) Translates to: MLPANPLPTLSAVGPAAGSAISL*LVSSLM Trigger: CATTAAGGAAGAAACTAACCACAACGAGATGGCAGA...CCCGGCAGCTGGACCCACAGCGGACAATGTTGGGAGTGGATTTGCAGGCAGCAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000018798.7 ENSMUST00000065433.12 ENSMUST00000076700.11 |
||
| CDS-3UTR CCA 90 bp | TCTTGGTCTGGCTATACCAGATCCCACCTCTACCTTTCTGTGATATGGTGGGCAGGGGGCTTGTGCAGCTaGTACATGGAGCTGATGACT | + |
|
Preference number: 4 (lower is better) Translates to: SWSGYTRSHLYLSVIWWAGGLCS*YMELMT Trigger: AGTCATCAGCTCCATGTACCAGCTGCACAAGCCCCC...TGCCCACCATATCACAGAAAGGTAGAGGTGGGATCTGGTATAGCCAGACCAAGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000065433.12 ENSMUST00000076700.11 |
||
| CDS-3UTR CCA 90 bp | TGTGGGTCCAGCTGCCGGGAAGGAGGCATAACCAGCTATCTTTGTGCTTCAGTGACACAGACTTGGCCTTaGACAGCAGCAGCAAGTTAT | + |
|
Preference number: 4 (lower is better) Translates to: CGSSCREGGITSYLCASVTQTWP*TAAASY Trigger: ATAACTTGCTGCTGCTGTCCAAGGCCAAGTCTGTGT...CACTGAAGCACAAAGATAGCTGGTTATGCCTCCTTCCCGGCAGCTGGACCCACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000018798.7 ENSMUST00000065433.12 ENSMUST00000076700.11 |
||
| CDS-3UTR CCA 90 bp | TCTTGGTCTGGCTATACCAGATCCCACCTCTACCTTTCTGTGATATGGTGGGCAGCATTGTTGATGGCCTaGTCCATCACGTGGGATGTC | + |
|
Preference number: 4 (lower is better) Translates to: SWSGYTRSHLYLSVIWWAALLMA*SITWDV Trigger: GACATCCCACGTGATGGACCAGGCCATCAACAATGC...TGCCCACCATATCACAGAAAGGTAGAGGTGGGATCTGGTATAGCCAGACCAAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065433.12 ENSMUST00000076700.11 |
||
| CDS-3UTR CCA 90 bp | GAGATGGCTCAACCCCAGTGGCTGTGCTGTCTTGGGGGATTTGGAGAATCTTTGACACAGACTTGGCCTTaGACAGCAGCAGCAAGTTAT | + |
|
Preference number: 4 (lower is better) Translates to: EMAQPQWLCCLGGFGESLTQTWP*TAAASY Trigger: ATAACTTGCTGCTGCTGTCCAAGGCCAAGTCTGTGT...CAAAGATTCTCCAAATCCCCCAAGACAGCACAGCCACTGGGGTTGAGCCATCTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000065433.12 ENSMUST00000076700.11 |
||
| 3UTR CAA 72 bp | TCCCTGAGATGGCTCAACCCCAGTGGCTGTGCTGTCTaGGGGGATTTGGAGAATCTTTGTGGCATAAACTCT | + |
|
Preference number: 4 (lower is better) Translates to: SLRWLNPSGCAV*GDLENLCGINS Trigger: AGAGTTTATGCCACAAAGATTCTCCAAATCCCCCAAGACAGCACAGCCACTGGGGTTGAGCCATCTCAGGGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000065433.12 ENSMUST00000076700.11 |
||
| CDS-3UTR GCA 90 bp | GCTGCCTGCAAATCCACTCCCAACATTGTCCGCTGTGGGTCCAGCTGCCGGGAAAGATTTGGGAATTATTaGATGAAAATCCCTAAAGCC | + |
|
Preference number: 4 (lower is better) Translates to: AACKSTPNIVRCGSSCRERFGNY*MKIPKA Trigger: GGCTTTAGGGATTTTCATGCAATAATTCCCAAATCT...TTCCCGGCAGCTGGACCCACAGCGGACAATGTTGGGAGTGGATTTGCAGGCAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065433.12 |
||
| CDS-3UTR GCA 90 bp | CCAACGCAAATCAAACGCCAAACAACCAACATAAAAGAACAAATGCTGCCTGCACTGACAAAGCCGAGCTaGCTTGGTCCCTGTGGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: PTQIKRQTTNIKEQMLPALTKPS*LGPCGS Trigger: GCTCCCACAGGGACCAAGGCAGCTCGGCTTTGTCAG...TGCAGGCAGCATTTGTTCTTTTATGTTGGTTGTTTGGCGTTTGATTTGCGTTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065433.12 ENSMUST00000076700.11 |
||
| CDS-3UTR CCA 90 bp | TCTTGGTCTGGCTATACCAGATCCCACCTCTACCTTTCTGTGATATGGTGGGCATGCTCTCTGTATCTGTaGAGTCTTGGCAGCTGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: SWSGYTRSHLYLSVIWWACSLYL*SLGSCC Trigger: GCAACAGCTGCCAAGACTCCACAGATACAGAGAGCA...TGCCCACCATATCACAGAAAGGTAGAGGTGGGATCTGGTATAGCCAGACCAAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065433.12 ENSMUST00000076700.11 |
||
| 3UTR CAA 72 bp | CAGTGGCTGTGCTGTCTTGGGGGATTTGGAGAATCTTaGTGGCATAAACTCTGCTTAGGGCAAGATCCACCT | + |
|
Preference number: 4 (lower is better) Translates to: QWLCCLGGFGES*WHKLCLGQDPP Trigger: AGGTGGATCTTGCCCTAAGCAGAGTTTATGCCACAAAGATTCTCCAAATCCCCCAAGACAGCACAGCCACTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000065433.12 ENSMUST00000076700.11 |
||
| CDS-3UTR TCA 90 bp | TCTTGGTCTGGCTATACCAGATCCCACCTCTACCTTTCTGTGATATGGTGGGCACAATATCCACATTTGTaGGGCTTACCAACGGAGTGC | + |
|
Preference number: 4 (lower is better) Translates to: SWSGYTRSHLYLSVIWWAQYPHL*GLPTEC Trigger: GCACTCCGTTGGTAAGCCTCACAAATGTGGATATTG...TGCCCACCATATCACAGAAAGGTAGAGGTGGGATCTGGTATAGCCAGACCAAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065433.12 ENSMUST00000076700.11 |
||
| CDS-3UTR TCA 90 bp | CTTCCAACGCAAATCAAACGCCAAACAACCAACATAAAAGAACAAATGCTGCCTGGCCTCTCGCTCCGATaGCACAGACTTGGCCTTGGA | + |
|
Preference number: 4 (lower is better) Translates to: LPTQIKRQTTNIKEQMLPGLSLR*HRLGLG Trigger: TCCAAGGCCAAGTCTGTGTCATCGGAGCGAGAGGCC...AGGCAGCATTTGTTCTTTTATGTTGGTTGTTTGGCGTTTGATTTGCGTTGGAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000018798.7 ENSMUST00000065433.12 ENSMUST00000076700.11 |
||
| CDS-3UTR TCA 90 bp | AGATGGCTCAACCCCAGTGGCTGTGCTGTCTTGGGGGATTTGGAGAATCTTTGTTGTGAATGGTATACATaGCGTGATCCAGGAAGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: RWLNPSGCAVLGDLENLCCEWYT*RDPGRA Trigger: TGCTCTTCCTGGATCACGTCATGTATACCATTCACA...ACAAAGATTCTCCAAATCCCCCAAGACAGCACAGCCACTGGGGTTGAGCCATCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000065433.12 ENSMUST00000076700.11 |
||
| CDS-3UTR GCA 90 bp | ACAGGAACCAGGATAACTGAGGATGGGGCTTGGAAGAAAGCTTTGGCTTCCAAGCTTGCACAGGTCTTCTaGCATCTCGTTGTGGTTAGT | + |
|
Preference number: 4 (lower is better) Translates to: TGTRITEDGAWKKALASKLAQVF*HLVVVS Trigger: ACTAACCACAACGAGATGGCAGAAGACCTGTGCAAG...CTTGGAAGCCAAAGCTTTCTTCCAAGCCCCATCCTCAGTTATCCTGGTTCCTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065433.12 ENSMUST00000076700.11 |
||
| CDS-3UTR GCA 90 bp | GGGGCTTGGAAGAAAGCTTTGGCTTCCAAGAAGTTTTACAGTATCAGAAGTTTACTGACAAAGCCGAGCTaGCTTGGTCCCTGTGGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: GAWKKALASKKFYSIRSLLTKPS*LGPCGS Trigger: GCTCCCACAGGGACCAAGGCAGCTCGGCTTTGTCAG...TAAACTTCTGATACTGTAAAACTTCTTGGAAGCCAAAGCTTTCTTCCAAGCCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065433.12 ENSMUST00000076700.11 |
||
| CDS-3UTR TCA 90 bp | CTGATGCAATGCAATCCTGTCACTAACATTAAAAACTTATCTTCCAACGCAAATCGCGCTGCTCCTCCTTaGGAGCCAGCCCATTGCGTG | + |
|
Preference number: 4 (lower is better) Translates to: LMQCNPVTNIKNLSSNANRAAPP*EPAHCV Trigger: CACGCAATGGGCTGGCTCTCAAGGAGGAGCAGCGCG...ATTTGCGTTGGAAGATAAGTTTTTAATGTTAGTGACAGGATTGCATTGCATCAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000018798.7 ENSMUST00000065433.12 ENSMUST00000076700.11 |
||
| CDS-3UTR GCA 90 bp | ACAAGCATAAGCCCCCATCTTTATAACAAGCACCTCTGCTTCCCATTGAAGACTGACAAGGGACCTCTCTaGTCCTATCTTGCACAGGTC | + |
|
Preference number: 4 (lower is better) Translates to: TSISPHLYNKHLCFPLKTDKGPL*SYLAQV Trigger: GACCTGTGCAAGATAGGAGCAGAGAGGTCCCTTGTC...AGTCTTCAATGGGAAGCAGAGGTGCTTGTTATAAAGATGGGGGCTTATGCTTGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000076700.11 |
||
| CDS-3UTR GCA 90 bp | CTTAATAGTCTTTCAAAGTTCAACCTTTGGCCTTGGTCTCTGCACAGGCTGATGTTTGGCGACATTGCTTaGCAGCCTGTCCAGGACAAG | + |
|
Preference number: 4 (lower is better) Translates to: LNSLSKFNLWPWSLHRLMFGDIA*QPVQDK Trigger: CTTGTCCTGGACAGGCTGGCAAGCAATGTCGCCAAA...CATCAGCCTGTGCAGAGACCAAGGCCAAAGGTTGAACTTTGAAAGACTATTAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065433.12 ENSMUST00000076700.11 |
||
| CDS-3UTR CCA 90 bp | CTTAATAGTCTTTCAAAGTTCAACCTTTGGCCTTGGTCTCTGCACAGGCTGATGGCCTGGTCCATCACGTaGGATGTCATCATATCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: LNSLSKFNLWPWSLHRLMAWSIT*DVIISS Trigger: GGAGGATATGATGACATCCCACGTGATGGACCAGGC...CATCAGCCTGTGCAGAGACCAAGGCCAAAGGTTGAACTTTGAAAGACTATTAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065433.12 ENSMUST00000076700.11 |
||
| CDS-3UTR CCA 90 bp | CTGATGCAATGCAATCCTGTCACTAACATTAAAAACTTATCTTCCAACGCAAATGGGTGTCTGCACCAATaGGCGCAGGGACTCAGCCCC | + |
|
Preference number: 4 (lower is better) Translates to: LMQCNPVTNIKNLSSNANGCLHQ*AQGLSP Trigger: GGGGCTGAGTCCCTGCGCCCATTGGTGCAGACACCC...ATTTGCGTTGGAAGATAAGTTTTTAATGTTAGTGACAGGATTGCATTGCATCAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000018798.7 ENSMUST00000065433.12 ENSMUST00000076700.11 |
||
| CDS-3UTR CCA 90 bp | TCCAACGCAAATCAAACGCCAAACAACCAACATAAAAGAACAAATGCTGCCTGCCCGATGACACAGACTTaGCCTTGGACAGCAGCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: SNANQTPNNQHKRTNAACPMTQT*PWTAAA Trigger: TGCTGCTGCTGTCCAAGGCCAAGTCTGTGTCATCGG...GCAGGCAGCATTTGTTCTTTTATGTTGGTTGTTTGGCGTTTGATTTGCGTTGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000018798.7 ENSMUST00000065433.12 ENSMUST00000076700.11 |
||
| CDS-3UTR TCA 90 bp | CTGATGCAATGCAATCCTGTCACTAACATTAAAAACTTATCTTCCAACGCAAATCACCCGAGTGCAGCTTaGTGTGCCGCAGGAGGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: LMQCNPVTNIKNLSSNANHPSAA*CAAGGC Trigger: GCAACCTCCTGCGGCACATCAAGCTGCACTCGGGTG...ATTTGCGTTGGAAGATAAGTTTTTAATGTTAGTGACAGGATTGCATTGCATCAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000018798.7 ENSMUST00000065433.12 ENSMUST00000076700.11 |
||
| CDS-3UTR TCA 90 bp | GTCTCCAAACATTACAACATTCTAATACCTCCACTTGATAAAGGTTGCATGGCCCCGCGTGATATGGGATaGGAACTCGTACCTGTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: VSKHYNILIPPLDKGCMAPRDMG*ELVPVL Trigger: CAGGACAGGTACGAGTTCTCATCCCATATCACGCGG...GGCCATGCAACCTTTATCAAGTGGAGGTATTAGAATGTTGTAATGTTTGGAGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065433.12 ENSMUST00000076700.11 |
||
| CDS-3UTR TCA 90 bp | GGGGCTTGGAAGAAAGCTTTGGCTTCCAAGAAGTTTTACAGTATCAGAAGTTTAAATGCCTCCAACTCCTaGCAAAGCCGAGCTGCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: GAWKKALASKKFYSIRSLNASNS*QSRAAL Trigger: CAAGGCAGCTCGGCTTTGTCAGGAGTTGGAGGCATT...TAAACTTCTGATACTGTAAAACTTCTTGGAAGCCAAAGCTTTCTTCCAAGCCCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065433.12 ENSMUST00000076700.11 |
||
| CDS-3UTR GCA 90 bp | GTCTCCAAACATTACAACATTCTAATACCTCCACTTGATAAAGGTTGCATGGCCTGCCCGGAAGGCCCATaGTTTCCAAGTAGTTGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: VSKHYNILIPPLDKGCMACPEGP*FPSSCG Trigger: GCCACAACTACTTGGAAAGCATGGGCCTTCCGGGCA...GGCCATGCAACCTTTATCAAGTGGAGGTATTAGAATGTTGTAATGTTTGGAGAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065433.12 ENSMUST00000076700.11 |
||
| CDS-3UTR GCA 90 bp | CCAACGCAAATCAAACGCCAAACAACCAACATAAAAGAACAAATGCTGCCTGCATTTGGCGACATTGCTTaGCAGCCTGTCCAGGACAAG | + |
|
Preference number: 4 (lower is better) Translates to: PTQIKRQTTNIKEQMLPAFGDIA*QPVQDK Trigger: CTTGTCCTGGACAGGCTGGCAAGCAATGTCGCCAAA...TGCAGGCAGCATTTGTTCTTTTATGTTGGTTGTTTGGCGTTTGATTTGCGTTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000018798.7 ENSMUST00000065433.12 ENSMUST00000076700.11 |
||
| CDS-3UTR GCA 90 bp | TCCAACGCAAATCAAACGCCAAACAACCAACATAAAAGAACAAATGCTGCCTGCAGCCCATTGCGTGCATaGGGGTTGATGTGGTTGGTT | + |
|
Preference number: 4 (lower is better) Translates to: SNANQTPNNQHKRTNAACSPLRA*GLMWLV Trigger: AACCAACCACATCAACCCGCATGCACGCAATGGGCT...GCAGGCAGCATTTGTTCTTTTATGTTGGTTGTTTGGCGTTTGATTTGCGTTGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000018798.7 ENSMUST00000065433.12 ENSMUST00000076700.11 |
||
| CDS-3UTR CCA 90 bp | GTCTCCAAACATTACAACATTCTAATACCTCCACTTGATAAAGGTTGCATGGCCAGGAGGTTGCCTTTCTaGGTAAAGGAGGCCCCACAC | + |
|
Preference number: 4 (lower is better) Translates to: VSKHYNILIPPLDKGCMARRLPF*VKEAPH Trigger: GTGTGGGGCCTCCTTTACCCAGAAAGGCAACCTCCT...GGCCATGCAACCTTTATCAAGTGGAGGTATTAGAATGTTGTAATGTTTGGAGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065433.12 ENSMUST00000076700.11 |
||
| 3UTR CAA 72 bp | AGCTCGAGGCTGCCTACTGGGAAAGGTTTCAAGGGCTaGTCATTTTTAGAAAACCTGCGTACTTCAGCGTTT | + |
|
Preference number: 4 (lower is better) Translates to: SSRLPTGKGFKG*SFLENLRTSAF Trigger: AAACGCTGAAGTACGCAGGTTTTCTAAAAATGACAAGCCCTTGAAACCTTTCCCAGTAGGCAGCCTCGAGCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000065433.12 ENSMUST00000076700.11 |
||
| CDS-3UTR TCA 90 bp | GTCTCCAAACATTACAACATTCTAATACCTCCACTTGATAAAGGTTGCATGGCCGGGGCTCTCCTTTCCTaGAACTTGGGACATGTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: VSKHYNILIPPLDKGCMAGALLS*NLGHVL Trigger: CAAGACATGTCCCAAGTTTCAGGAAAGGAGAGCCCC...GGCCATGCAACCTTTATCAAGTGGAGGTATTAGAATGTTGTAATGTTTGGAGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065433.12 ENSMUST00000076700.11 |
||
| CDS-3UTR TCA 90 bp | ACGCAAATCAAACGCCAAACAACCAACATAAAAGAACAAATGCTGCCTGCAAATCCGCGTGATATGGGATaGGAACTCGTACCTGTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: TQIKRQTTNIKEQMLPANPRDMG*ELVPVL Trigger: CAGGACAGGTACGAGTTCTCATCCCATATCACGCGG...ATTTGCAGGCAGCATTTGTTCTTTTATGTTGGTTGTTTGGCGTTTGATTTGCGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000018798.7 ENSMUST00000065433.12 ENSMUST00000076700.11 |
||
| CDS-3UTR TCA 90 bp | AGATGGCTCAACCCCAGTGGCTGTGCTGTCTTGGGGGATTTGGAGAATCTTTGTTTGGGAATTATTGCATaGAAATCCCTAAAGCCATCA | + |
|
Preference number: 4 (lower is better) Translates to: RWLNPSGCAVLGDLENLCLGIIA*KSLKPS Trigger: TGATGGCTTTAGGGATTTTCATGCAATAATTCCCAA...ACAAAGATTCTCCAAATCCCCCAAGACAGCACAGCCACTGGGGTTGAGCCATCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000065433.12 |
||
| CDS-3UTR GCA 90 bp | GTCTCCAAACATTACAACATTCTAATACCTCCACTTGATAAAGGTTGCATGGCCGACAAGGGACCTCTCTaGTCCTATCTTGCACAGGTC | + |
|
Preference number: 4 (lower is better) Translates to: VSKHYNILIPPLDKGCMADKGPL*SYLAQV Trigger: GACCTGTGCAAGATAGGAGCAGAGAGGTCCCTTGTC...GGCCATGCAACCTTTATCAAGTGGAGGTATTAGAATGTTGTAATGTTTGGAGAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065433.12 ENSMUST00000076700.11 |
||
| CDS-3UTR GCA 90 bp | CTTCCAACGCAAATCAAACGCCAAACAACCAACATAAAAGAACAAATGCTGCCTTACGTTTGGCGACATTaGTTGCCAGCCTGTCCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: LPTQIKRQTTNIKEQMLPYVWRH*LPACPG Trigger: TCCTGGACAGGCTGGCAAGCAATGTCGCCAAACGTA...AGGCAGCATTTGTTCTTTTATGTTGGTTGTTTGGCGTTTGATTTGCGTTGGAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000018798.7 ENSMUST00000065433.12 ENSMUST00000076700.11 |
||
| CDS-3UTR GCA 90 bp | AACGCAAATCAAACGCCAAACAACCAACATAAAAGAACAAATGCTGCCTGCAAATTGTACACCTTCAGCTaGTCGCCACTCGTGCTGACC | + |
|
Preference number: 4 (lower is better) Translates to: NANQTPNNQHKRTNAACKLYTFS*SPLVLT Trigger: GGTCAGCACGAGTGGCGAGCAGCTGAAGGTGTACAA...TTTGCAGGCAGCATTTGTTCTTTTATGTTGGTTGTTTGGCGTTTGATTTGCGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000018798.7 ENSMUST00000065433.12 ENSMUST00000076700.11 |
||
| CDS-3UTR CCA 90 bp | ACGCAAATCAAACGCCAAACAACCAACATAAAAGAACAAATGCTGCCTGCAAATCCGATGACACAGACTTaGCCTTGGACAGCAGCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: TQIKRQTTNIKEQMLPANPMTQT*PWTAAA Trigger: TGCTGCTGCTGTCCAAGGCCAAGTCTGTGTCATCGG...ATTTGCAGGCAGCATTTGTTCTTTTATGTTGGTTGTTTGGCGTTTGATTTGCGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000018798.7 ENSMUST00000065433.12 ENSMUST00000076700.11 |
||
| CDS-3UTR TCA 90 bp | AACGCAAATCAAACGCCAAACAACCAACATAAAAGAACAAATGCTGCCTGCAAAGGGGCTCTCCTTTCCTaGAACTTGGGACATGTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: NANQTPNNQHKRTNAACKGALLS*NLGHVL Trigger: CAAGACATGTCCCAAGTTTCAGGAAAGGAGAGCCCC...TTTGCAGGCAGCATTTGTTCTTTTATGTTGGTTGTTTGGCGTTTGATTTGCGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000018798.7 ENSMUST00000065433.12 ENSMUST00000076700.11 |
||
| CDS-3UTR GCA 90 bp | CTTCCAACGCAAATCAAACGCCAAACAACCAACATAAAAGAACAAATGCTGCCTTCACTCTTGGAGTTCTaGTGTGCTCCAGAGGTAGTG | + |
|
Preference number: 4 (lower is better) Translates to: LPTQIKRQTTNIKEQMLPSLLEF*CAPEVV Trigger: CACTACCTCTGGAGCACAGCAGAACTCCAAGAGTGA...AGGCAGCATTTGTTCTTTTATGTTGGTTGTTTGGCGTTTGATTTGCGTTGGAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000018798.7 ENSMUST00000065433.12 ENSMUST00000076700.11 |
||
| CDS-3UTR GCA 90 bp | CCAACGCAAATCAAACGCCAAACAACCAACATAAAAGAACAAATGCTGCCTGCACTTGCACAGGTCTTCTaGCATCTCGTTGTGGTTAGT | + |
|
Preference number: 4 (lower is better) Translates to: PTQIKRQTTNIKEQMLPALAQVF*HLVVVS Trigger: ACTAACCACAACGAGATGGCAGAAGACCTGTGCAAG...TGCAGGCAGCATTTGTTCTTTTATGTTGGTTGTTTGGCGTTTGATTTGCGTTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000018798.7 ENSMUST00000065433.12 ENSMUST00000076700.11 |
||
| CDS-3UTR GCA 90 bp | ACGCAAATCAAACGCCAAACAACCAACATAAAAGAACAAATGCTGCCTGCAAATTACGTTTGGCGACATTaGTTGCCAGCCTGTCCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: TQIKRQTTNIKEQMLPANYVWRH*LPACPG Trigger: TCCTGGACAGGCTGGCAAGCAATGTCGCCAAACGTA...ATTTGCAGGCAGCATTTGTTCTTTTATGTTGGTTGTTTGGCGTTTGATTTGCGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000018798.7 ENSMUST00000065433.12 ENSMUST00000076700.11 |
||
| CDS-3UTR GCA 90 bp | ACGCAAATCAAACGCCAAACAACCAACATAAAAGAACAAATGCTGCCTGCAAATAGCCCATTGCGTGCATaGGGGTTGATGTGGTTGGTT | + |
|
Preference number: 4 (lower is better) Translates to: TQIKRQTTNIKEQMLPANSPLRA*GLMWLV Trigger: AACCAACCACATCAACCCGCATGCACGCAATGGGCT...ATTTGCAGGCAGCATTTGTTCTTTTATGTTGGTTGTTTGGCGTTTGATTTGCGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000018798.7 ENSMUST00000065433.12 ENSMUST00000076700.11 |
||
| CDS-3UTR CCA 90 bp | AACGCAAATCAAACGCCAAACAACCAACATAAAAGAACAAATGCTGCCTGCAAAGCCTGGTCCATCACGTaGGATGTCATCATATCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: NANQTPNNQHKRTNAACKAWSIT*DVIISS Trigger: GGAGGATATGATGACATCCCACGTGATGGACCAGGC...TTTGCAGGCAGCATTTGTTCTTTTATGTTGGTTGTTTGGCGTTTGATTTGCGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000018798.7 ENSMUST00000065433.12 ENSMUST00000076700.11 |
||
| CDS-3UTR CCA 90 bp | AACGCAAATCAAACGCCAAACAACCAACATAAAAGAACAAATGCTGCCTGCAAAGCATTGTTGATGGCCTaGTCCATCACGTGGGATGTC | + |
|
Preference number: 4 (lower is better) Translates to: NANQTPNNQHKRTNAACKALLMA*SITWDV Trigger: GACATCCCACGTGATGGACCAGGCCATCAACAATGC...TTTGCAGGCAGCATTTGTTCTTTTATGTTGGTTGTTTGGCGTTTGATTTGCGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000018798.7 ENSMUST00000065433.12 ENSMUST00000076700.11 |
||
| 3UTR CAA 72 bp | CACACACTTTTGAACTTTTTGAGCACATTTCACACCTaGGTGAACTCAGTCCCTGCACTTGAACTCAGACGT | + |
|
Preference number: 4 (lower is better) Translates to: HTLLNFLSTFHT*VNSVPALELRR Trigger: ACGTCTGAGTTCAAGTGCAGGGACTGAGTTCACCAAGGTGTGAAATGTGCTCAAAAAGTTCAAAAGTGTGTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000065433.12 ENSMUST00000076700.11 |
||
| CDS-3UTR GCA 90 bp | AACGCAAATCAAACGCCAAACAACCAACATAAAAGAACAAATGCTGCCTGCAAATCACTCTTGGAGTTCTaGTGTGCTCCAGAGGTAGTG | + |
|
Preference number: 4 (lower is better) Translates to: NANQTPNNQHKRTNAACKSLLEF*CAPEVV Trigger: CACTACCTCTGGAGCACAGCAGAACTCCAAGAGTGA...TTTGCAGGCAGCATTTGTTCTTTTATGTTGGTTGTTTGGCGTTTGATTTGCGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000018798.7 ENSMUST00000065433.12 ENSMUST00000076700.11 |
||
| CDS-3UTR GCA 90 bp | CTGATGCAATGCAATCCTGTCACTAACATTAAAAACTTATCTTCCAACGCAAATTTGTACACCTTCAGCTaGTCGCCACTCGTGCTGACC | + |
|
Preference number: 4 (lower is better) Translates to: LMQCNPVTNIKNLSSNANLYTFS*SPLVLT Trigger: GGTCAGCACGAGTGGCGAGCAGCTGAAGGTGTACAA...ATTTGCGTTGGAAGATAAGTTTTTAATGTTAGTGACAGGATTGCATTGCATCAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000018798.7 ENSMUST00000065433.12 ENSMUST00000076700.11 |
||
| CDS-3UTR CCA 90 bp | CTGATGCAATGCAATCCTGTCACTAACATTAAAAACTTATCTTCCAACGCAAATAGGAGGTTGCCTTTCTaGGTAAAGGAGGCCCCACAC | + |
|
Preference number: 4 (lower is better) Translates to: LMQCNPVTNIKNLSSNANRRLPF*VKEAPH Trigger: GTGTGGGGCCTCCTTTACCCAGAAAGGCAACCTCCT...ATTTGCGTTGGAAGATAAGTTTTTAATGTTAGTGACAGGATTGCATTGCATCAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000018798.7 ENSMUST00000065433.12 ENSMUST00000076700.11 |
||
| CDS-3UTR GCA 90 bp | CTGATGCAATGCAATCCTGTCACTAACATTAAAAACTTATCTTCCAACGCAAATTTTGGCGACATTGCTTaGCAGCCTGTCCAGGACAAG | + |
|
Preference number: 4 (lower is better) Translates to: LMQCNPVTNIKNLSSNANFGDIA*QPVQDK Trigger: CTTGTCCTGGACAGGCTGGCAAGCAATGTCGCCAAA...ATTTGCGTTGGAAGATAAGTTTTTAATGTTAGTGACAGGATTGCATTGCATCAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000018798.7 ENSMUST00000065433.12 ENSMUST00000076700.11 |
||
| CDS-3UTR CCA 90 bp | ACGCAAATCAAACGCCAAACAACCAACATAAAAGAACAAATGCTGCCTGCAAATACACAGACTTGGCCTTaGACAGCAGCAGCAAGTTAT | + |
|
Preference number: 4 (lower is better) Translates to: TQIKRQTTNIKEQMLPANTQTWP*TAAASY Trigger: ATAACTTGCTGCTGCTGTCCAAGGCCAAGTCTGTGT...ATTTGCAGGCAGCATTTGTTCTTTTATGTTGGTTGTTTGGCGTTTGATTTGCGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000018798.7 ENSMUST00000065433.12 ENSMUST00000076700.11 |
||
| 3UTR CAA 72 bp | ACCAGGATAACTGAGGATGGGGCTTGGAAGAAAGCTTaGGCTTCCAAGAAGTTTTACAGTATCAGAAGTTTA | + |
|
Preference number: 4 (lower is better) Translates to: TRITEDGAWKKA*ASKKFYSIRSL Trigger: TAAACTTCTGATACTGTAAAACTTCTTGGAAGCCAAAGCTTTCTTCCAAGCCCCATCCTCAGTTATCCTGGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065433.12 ENSMUST00000076700.11 |
||
| CDS-3UTR TCA 90 bp | ACGCAAATCAAACGCCAAACAACCAACATAAAAGAACAAATGCTGCCTGCAAATTCTCCAAGAAATTTCTaGGGCATAGAGCTCTTACGT | + |
|
Preference number: 4 (lower is better) Translates to: TQIKRQTTNIKEQMLPANSPRNF*GIELLR Trigger: ACGTAAGAGCTCTATGCCTCAGAAATTTCTTGGAGA...ATTTGCAGGCAGCATTTGTTCTTTTATGTTGGTTGTTTGGCGTTTGATTTGCGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000018798.7 ENSMUST00000065433.12 ENSMUST00000076700.11 |
||
| CDS-3UTR CCA 90 bp | CTTCCAACGCAAATCAAACGCCAAACAACCAACATAAAAGAACAAATGCTGCCTTCTGCCATCTCGTTGTaGTTAGTTTCTTCCTTAATG | + |
|
Preference number: 4 (lower is better) Translates to: LPTQIKRQTTNIKEQMLPSAISL*LVSSLM Trigger: CATTAAGGAAGAAACTAACCACAACGAGATGGCAGA...AGGCAGCATTTGTTCTTTTATGTTGGTTGTTTGGCGTTTGATTTGCGTTGGAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000018798.7 ENSMUST00000065433.12 ENSMUST00000076700.11 |
||
| 3UTR CAA 72 bp | AGCCCCCATCTTTATAACAAGCACCTCTGCTTCCCATaGAAGACTCTAACATTTTATTATGTGGTTGTATCT | + |
|
Preference number: 4 (lower is better) Translates to: SPHLYNKHLCFP*KTLTFYYVVVS Trigger: AGATACAACCACATAATAAAATGTTAGAGTCTTCAATGGGAAGCAGAGGTGCTTGTTATAAAGATGGGGGCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000076700.11 |
||
| CDS-3UTR CCA 90 bp | CTGATGCAATGCAATCCTGTCACTAACATTAAAAACTTATCTTCCAACGCAAATTCTGCCATCTCGTTGTaGTTAGTTTCTTCCTTAATG | + |
|
Preference number: 4 (lower is better) Translates to: LMQCNPVTNIKNLSSNANSAISL*LVSSLM Trigger: CATTAAGGAAGAAACTAACCACAACGAGATGGCAGA...ATTTGCGTTGGAAGATAAGTTTTTAATGTTAGTGACAGGATTGCATTGCATCAG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000018798.7 ENSMUST00000065433.12 ENSMUST00000076700.11 |
||
| CDS TCA 90 bp | CTCGCCACTCGTGCTGACCACACGGAAGGCATCCTGCGAGTTCTCTaGGGCCGCCCTCAGCACCTCGTAGGCGCGCTGCTCCTCCTTGAG | + |
|
Preference number: 5 (lower is better) Translates to: LATRADHTEGILRVL*GRPQHLVGALLLLE Trigger: CTCAAGGAGGAGCAGCGCGCCTACGAGGTGCTGAGGGCGGCCTCAGAGAACTCGCAGGATGCCTTCCGTGTGGTCAGCACGAGTGGCGAG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000018798.7 ENSMUST00000065433.12 ENSMUST00000076700.11 |
||
| CDS-3UTR CAA 90 bp | GCTGCCTGCAAATCCACTCCCAACATTGTCCGCTGTGGGTCCAGCTGCCGGGAAGAGTCTTGGCAGCTGTaGCTCGGGGAGGCCTCTCGC | + |
|
Preference number: 5 (lower is better) Translates to: AACKSTPNIVRCGSSCREESWQL*LGEASR Trigger: GCGAGAGGCCTCCCCGAGCAACAGCTGCCAAGACTC...TTCCCGGCAGCTGGACCCACAGCGGACAATGTTGGGAGTGGATTTGCAGGCAGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000018798.7 ENSMUST00000065433.12 ENSMUST00000076700.11 |
||
| CDS-3UTR CAA 90 bp | CCTGCAAATCCACTCCCAACATTGTCCGCTGTGGGTCCAGCTGCCGGGAAGGAGGCGCGCTGCTCCTCCTaGAGAGCCAGCCCATTGCGT | + |
|
Preference number: 5 (lower is better) Translates to: PANPLPTLSAVGPAAGKEARCSS*RASPLR Trigger: ACGCAATGGGCTGGCTCTCAAGGAGGAGCAGCGCGC...CTCCTTCCCGGCAGCTGGACCCACAGCGGACAATGTTGGGAGTGGATTTGCAGG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000018798.7 ENSMUST00000065433.12 ENSMUST00000076700.11 |
||
| CDS CCA 90 bp | GGCAGCTGTTGCTCGGGGAGGCCTCTCGCTCCGATGACACAGACTTaGCCTTGGACAGCAGCAGCAAGTTATCCACGGCGTCCTGTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: GSCCSGRPLAPMTQT*PWTAAASYPRRPVL Trigger: CAGCACAGGACGCCGTGGATAACTTGCTGCTGCTGTCCAAGGCCAAGTCTGTGTCATCGGAGCGAGAGGCCTCCCCGAGCAACAGCTGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000018798.7 ENSMUST00000065433.12 ENSMUST00000076700.11 |
||
| CDS-3UTR CAA 90 bp | AATGCTGCCTGCAAATCCACTCCCAACATTGTCCGCTGTGGGTCCAGCTGCCGGGAGTCTTGGCAGCTGTaGCTCGGGGAGGCCTCTCGC | + |
|
Preference number: 5 (lower is better) Translates to: NAACKSTPNIVRCGSSCRESWQL*LGEASR Trigger: GCGAGAGGCCTCCCCGAGCAACAGCTGCCAAGACTC...CCGGCAGCTGGACCCACAGCGGACAATGTTGGGAGTGGATTTGCAGGCAGCATT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000018798.7 ENSMUST00000065433.12 ENSMUST00000076700.11 |
||
| CDS-3UTR CAA 90 bp | GCAGAGCTCCCTGAGATGGCTCAACCCCAGTGGCTGTGCTGTCTTGGGGGATTTGAGTCTTGGCAGCTGTaGCTCGGGGAGGCCTCTCGC | + |
|
Preference number: 5 (lower is better) Translates to: AELPEMAQPQWLCCLGGFESWQL*LGEASR Trigger: GCGAGAGGCCTCCCCGAGCAACAGCTGCCAAGACTC...AAATCCCCCAAGACAGCACAGCCACTGGGGTTGAGCCATCTCAGGGAGCTCTGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000065433.12 ENSMUST00000076700.11 |
||
| CDS TCA 90 bp | GGCAGTGTTCGCACTTGTACACCTTCAGCTGCTCGCCACTCGTGCTaGCCACACGGAAGGCATCCTGCGAGTTCTCTGAGGCCGCCCTCA | + |
|
Preference number: 5 (lower is better) Translates to: GSVRTCTPSAARHSC*PHGRHPASSLRPPS Trigger: TGAGGGCGGCCTCAGAGAACTCGCAGGATGCCTTCCGTGTGGTCAGCACGAGTGGCGAGCAGCTGAAGGTGTACAAGTGCGAACACTGCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000018798.7 ENSMUST00000065433.12 ENSMUST00000076700.11 |
||
| CDS TCA 90 bp | TGTGGAGTCTTGGCAGCTGTTGCTCGGGGAGGCCTCTCGCTCCGATaGCACAGACTTGGCCTTGGACAGCAGCAGCAAGTTATCCACGGC | + |
|
Preference number: 5 (lower is better) Translates to: CGVLAAVARGGLSLR*HRLGLGQQQQVIHG Trigger: GCCGTGGATAACTTGCTGCTGCTGTCCAAGGCCAAGTCTGTGTCATCGGAGCGAGAGGCCTCCCCGAGCAACAGCTGCCAAGACTCCACA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000018798.7 ENSMUST00000065433.12 ENSMUST00000076700.11 |
||
| CDS-3UTR CAA 90 bp | AATGCTGCCTGCAAATCCACTCCCAACATTGTCCGCTGTGGGTCCAGCTGCCGGCAAAGCCGAGCTGCCTaGGTCCCTGTGGGAGCCATT | + |
|
Preference number: 5 (lower is better) Translates to: NAACKSTPNIVRCGSSCRQSRAA*VPVGAI Trigger: AATGGCTCCCACAGGGACCAAGGCAGCTCGGCTTTG...CCGGCAGCTGGACCCACAGCGGACAATGTTGGGAGTGGATTTGCAGGCAGCATT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065433.12 ENSMUST00000076700.11 |
||
| CDS GCA 90 bp | GAAAGGCCGTTCACCCATGCCTCGATCACTCTTGGAGTTCTGCTGTaGTCCAGAGGTAGTGGACAGGTCCTCAGGGACAGGCATGGGCTC | + |
|
Preference number: 5 (lower is better) Translates to: ERPFTHASITLGVLL*SRGSGQVLRDRHGL Trigger: GAGCCCATGCCTGTCCCTGAGGACCTGTCCACTACCTCTGGAGCACAGCAGAACTCCAAGAGTGATCGAGGCATGGGTGAACGGCCTTTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000018798.7 ENSMUST00000048122.13 ENSMUST00000126058.8 |
||
| CDS CCA 90 bp | TGTTGCTCGGGGAGGCCTCTCGCTCCGATGACACAGACTTGGCCTTaGACAGCAGCAGCAAGTTATCCACGGCGTCCTGTGCTGAATGGT | + |
|
Preference number: 5 (lower is better) Translates to: CCSGRPLAPMTQTWP*TAAASYPRRPVLNG Trigger: ACCATTCAGCACAGGACGCCGTGGATAACTTGCTGCTGCTGTCCAAGGCCAAGTCTGTGTCATCGGAGCGAGAGGCCTCCCCGAGCAACA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000018798.7 ENSMUST00000065433.12 ENSMUST00000076700.11 |
||
| CDS-3UTR CAA 90 bp | TCCAGCTGCCGGGAAGGAGGCATAACCAGCTATCTTTGTGCTTCAGTGGGGCCTGAGGCCCCACACTGGTaGCACTGGAAAGGCCGTTCA | + |
|
Preference number: 5 (lower is better) Translates to: SSCREGGITSYLCASVGPEAPHW*HWKGRS Trigger: TGAACGGCCTTTCCAGTGCAACCAGTGTGGGGCCTC...AGGCCCCACTGAAGCACAAAGATAGCTGGTTATGCCTCCTTCCCGGCAGCTGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000018798.7 ENSMUST00000065433.12 ENSMUST00000076700.11 |
||
| CDS-3UTR CAA 90 bp | CCTGCAAATCCACTCCCAACATTGTCCGCTGTGGGTCCAGCTGCCGGGAAGGAGTTACGTTTGGCGACATaGCTTGCCAGCCTGTCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: PANPLPTLSAVGPAAGKELRLAT*LASLSR Trigger: CCTGGACAGGCTGGCAAGCAATGTCGCCAAACGTAA...CTCCTTCCCGGCAGCTGGACCCACAGCGGACAATGTTGGGAGTGGATTTGCAGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000018798.7 ENSMUST00000065433.12 ENSMUST00000076700.11 |
||
| CDS-3UTR CAA 90 bp | CTGCCGGGAAGGAGGCATAACCAGCTATCTTTGTGCTTCAGTGGGGCCTGGCTGTTGAGAGCCAGCCCATaGCGTGCATGCGGGTTGATG | + |
|
Preference number: 5 (lower is better) Translates to: LPGRRHNQLSLCFSGAWLLRASP*RACGLM Trigger: CATCAACCCGCATGCACGCAATGGGCTGGCTCTCAA...CAGCCAGGCCCCACTGAAGCACAAAGATAGCTGGTTATGCCTCCTTCCCGGCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000018798.7 ENSMUST00000065433.12 ENSMUST00000076700.11 |
||
| CDS-3UTR CAA 90 bp | GCAGAGCTCCCTGAGATGGCTCAACCCCAGTGGCTGTGCTGTCTTGGGGGATTTTTGAGAGCCAGCCCATaGCGTGCATGCGGGTTGATG | + |
|
Preference number: 5 (lower is better) Translates to: AELPEMAQPQWLCCLGGFLRASP*RACGLM Trigger: CATCAACCCGCATGCACGCAATGGGCTGGCTCTCAA...AAATCCCCCAAGACAGCACAGCCACTGGGGTTGAGCCATCTCAGGGAGCTCTGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000065433.12 ENSMUST00000076700.11 |
||
| CDS-3UTR CAA 90 bp | AATGCTGCCTGCAAATCCACTCCCAACATTGTCCGCTGTGGGTCCAGCTGCCGGCGGCAGTGTTCGCACTaGTACACCTTCAGCTGCTCG | + |
|
Preference number: 5 (lower is better) Translates to: NAACKSTPNIVRCGSSCRRQCSH*YTFSCS Trigger: CGAGCAGCTGAAGGTGTACAAGTGCGAACACTGCCG...CCGGCAGCTGGACCCACAGCGGACAATGTTGGGAGTGGATTTGCAGGCAGCATT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000018798.7 ENSMUST00000065433.12 ENSMUST00000076700.11 |
||
| CDS GCA 90 bp | CACTGGAAAGGCCGTTCACCCATGCCTCGATCACTCTTGGAGTTCTaGTGTGCTCCAGAGGTAGTGGACAGGTCCTCAGGGACAGGCATG | + |
|
Preference number: 5 (lower is better) Translates to: HWKGRSPMPRSLLEF*CAPEVVDRSSGTGM Trigger: CATGCCTGTCCCTGAGGACCTGTCCACTACCTCTGGAGCACAGCAGAACTCCAAGAGTGATCGAGGCATGGGTGAACGGCCTTTCCAGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000018798.7 ENSMUST00000048122.13 ENSMUST00000126058.8 |
||
| CDS GCA 90 bp | AGCCCCATATGCAACCATGCCTCGATCACTCTTGGAGTTCTGCTGTaGTCCAGAGGTAGTGGACAGGTCCTCAGGGACAGGCATGGGCTC | + |
|
Preference number: 5 (lower is better) Translates to: SPICNHASITLGVLL*SRGSGQVLRDRHGL Trigger: GAGCCCATGCCTGTCCCTGAGGACCTGTCCACTACCTCTGGAGCACAGCAGAACTCCAAGAGTGATCGAGGCATGGTTGCATATGGGGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065433.12 |
||
| CDS-3UTR CAA 90 bp | CCTGCAAATCCACTCCCAACATTGTCCGCTGTGGGTCCAGCTGCCGGGAAGGAGCTCTCTGCTCCTATCTaGCACAGGTCTTCTGCCATC | + |
|
Preference number: 5 (lower is better) Translates to: PANPLPTLSAVGPAAGKELSAPI*HRSSAI Trigger: GATGGCAGAAGACCTGTGCAAGATAGGAGCAGAGAG...CTCCTTCCCGGCAGCTGGACCCACAGCGGACAATGTTGGGAGTGGATTTGCAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000018798.7 ENSMUST00000065433.12 ENSMUST00000076700.11 |
||
| CDS-3UTR CAA 90 bp | GCTGCCTGCAAATCCACTCCCAACATTGTCCGCTGTGGGTCCAGCTGCCGGGAAGACACAGACTTGGCCTaGGACAGCAGCAGCAAGTTA | + |
|
Preference number: 5 (lower is better) Translates to: AACKSTPNIVRCGSSCREDTDLA*DSSSKL Trigger: TAACTTGCTGCTGCTGTCCAAGGCCAAGTCTGTGTC...TTCCCGGCAGCTGGACCCACAGCGGACAATGTTGGGAGTGGATTTGCAGGCAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000018798.7 ENSMUST00000065433.12 ENSMUST00000076700.11 |
||
| CDS-3UTR CAA 90 bp | TGCTGCCTGCAAATCCACTCCCAACATTGTCCGCTGTGGGTCCAGCTGCCGGGAGACACAGACTTGGCCTaGGACAGCAGCAGCAAGTTA | + |
|
Preference number: 5 (lower is better) Translates to: CCLQIHSQHCPLWVQLPGDTDLA*DSSSKL Trigger: TAACTTGCTGCTGCTGTCCAAGGCCAAGTCTGTGTC...TCCCGGCAGCTGGACCCACAGCGGACAATGTTGGGAGTGGATTTGCAGGCAGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000018798.7 ENSMUST00000065433.12 ENSMUST00000076700.11 |
||
| CDS-3UTR CAA 90 bp | AGATGGCTCAACCCCAGTGGCTGTGCTGTCTTGGGGGATTTGGAGAATCTTTGTGCGCGCTGCTCCTCCTaGAGAGCCAGCCCATTGCGT | + |
|
Preference number: 5 (lower is better) Translates to: RWLNPSGCAVLGDLENLCARCSS*RASPLR Trigger: ACGCAATGGGCTGGCTCTCAAGGAGGAGCAGCGCGC...ACAAAGATTCTCCAAATCCCCCAAGACAGCACAGCCACTGGGGTTGAGCCATCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000065433.12 ENSMUST00000076700.11 |
||
| CDS GCA 90 bp | CCATCAGCCCCATATGCAACCATGCCTCGATCACTCTTGGAGTTCTaGTGTGCTCCAGAGGTAGTGGACAGGTCCTCAGGGACAGGCATG | + |
|
Preference number: 5 (lower is better) Translates to: PSAPYATMPRSLLEF*CAPEVVDRSSGTGM Trigger: CATGCCTGTCCCTGAGGACCTGTCCACTACCTCTGGAGCACAGCAGAACTCCAAGAGTGATCGAGGCATGGTTGCATATGGGGCTGATGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065433.12 |
||
| CDS-3UTR CAA 90 bp | AATGCTGCCTGCAAATCCACTCCCAACATTGTCCGCTGTGGGTCCAGCTGCCGGATAGAGCTCTTACGTTaGGCGACATTGCTTGCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: NAACKSTPNIVRCGSSCRIELLR*ATLLAS Trigger: GCTGGCAAGCAATGTCGCCAAACGTAAGAGCTCTAT...CCGGCAGCTGGACCCACAGCGGACAATGTTGGGAGTGGATTTGCAGGCAGCATT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000018798.7 ENSMUST00000065433.12 ENSMUST00000076700.11 |
||
| CDS GCA 90 bp | TTTAACATTACTGGCCATGCCTCGATCACTCTTGGAGTTCTGCTGTaGTCCAGAGGTAGTGGACAGGTCCTCAGGGACAGGCATGGGCTC | + |
|
Preference number: 5 (lower is better) Translates to: FNITGHASITLGVLL*SRGSGQVLRDRHGL Trigger: GAGCCCATGCCTGTCCCTGAGGACCTGTCCACTACCTCTGGAGCACAGCAGAACTCCAAGAGTGATCGAGGCATGGCCAGTAATGTTAAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076700.11 |
||
| CDS-3UTR CAA 90 bp | CCTGCTCTTAGGAACCCTCTTGCCTCTGATAGCTACTTAAAACACAACTTGAGGGCGCGCTGCTCCTCCTaGAGAGCCAGCCCATTGCGT | + |
|
Preference number: 5 (lower is better) Translates to: PALRNPLASDSYLKHNLRARCSS*RASPLR Trigger: ACGCAATGGGCTGGCTCTCAAGGAGGAGCAGCGCGC...CCTCAAGTTGTGTTTTAAGTAGCTATCAGAGGCAAGAGGGTTCCTAAGAGCAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076700.11 |
||
| CDS-3UTR CAA 90 bp | TCTTGGTCTGGCTATACCAGATCCCACCTCTACCTTTCTGTGATATGGTGGGCACAAAGCCGAGCTGCCTaGGTCCCTGTGGGAGCCATT | + |
|
Preference number: 5 (lower is better) Translates to: SWSGYTRSHLYLSVIWWAQSRAA*VPVGAI Trigger: AATGGCTCCCACAGGGACCAAGGCAGCTCGGCTTTG...TGCCCACCATATCACAGAAAGGTAGAGGTGGGATCTGGTATAGCCAGACCAAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065433.12 ENSMUST00000076700.11 |
||
| CDS GCA 90 bp | TTTGGCGACATTGCTTGCCAGCCTGTCCAGGACAAGGGACCTCTCTaGTCCTATCTTGCACAGGTCTTCTGCCATCTCGTTGTGGTTAGT | + |
|
Preference number: 5 (lower is better) Translates to: FGDIACQPVQDKGPL*SYLAQVFCHLVVVS Trigger: ACTAACCACAACGAGATGGCAGAAGACCTGTGCAAGATAGGAGCAGAGAGGTCCCTTGTCCTGGACAGGCTGGCAAGCAATGTCGCCAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000018798.7 ENSMUST00000048122.13 ENSMUST00000065433.12 ENSMUST00000076700.11 |
||
| CDS-3UTR CAA 90 bp | TGCTGCCTGCAAATCCACTCCCAACATTGTCCGCTGTGGGTCCAGCTGCCGGGATCTTCTGCCATCTCGTaGTGGTTAGTTTCTTCCTTA | + |
|
Preference number: 5 (lower is better) Translates to: CCLQIHSQHCPLWVQLPGSSAIS*WLVSSL Trigger: TAAGGAAGAAACTAACCACAACGAGATGGCAGAAGA...TCCCGGCAGCTGGACCCACAGCGGACAATGTTGGGAGTGGATTTGCAGGCAGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000018798.7 ENSMUST00000065433.12 ENSMUST00000076700.11 |
||
| CDS GCA 90 bp | TCTACTTTAACATTACTGGCCATGCCTCGATCACTCTTGGAGTTCTaGTGTGCTCCAGAGGTAGTGGACAGGTCCTCAGGGACAGGCATG | + |
|
Preference number: 5 (lower is better) Translates to: STLTLLAMPRSLLEF*CAPEVVDRSSGTGM Trigger: CATGCCTGTCCCTGAGGACCTGTCCACTACCTCTGGAGCACAGCAGAACTCCAAGAGTGATCGAGGCATGGCCAGTAATGTTAAAGTAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076700.11 |
||
| CDS-3UTR CAA 90 bp | TGTGGGTCCAGCTGCCGGGAAGGAGGCATAACCAGCTATCTTTGTGCTTCAGTGAACTTGGGACATGTCTaGACCCTCATCGACATCCAT | + |
|
Preference number: 5 (lower is better) Translates to: CGSSCREGGITSYLCASVNLGHV*TLIDIH Trigger: ATGGATGTCGATGAGGGTCAAGACATGTCCCAAGTT...CACTGAAGCACAAAGATAGCTGGTTATGCCTCCTTCCCGGCAGCTGGACCCACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000018798.7 ENSMUST00000065433.12 ENSMUST00000076700.11 |
||
| CDS-3UTR CAA 90 bp | AATGCTGCCTGCAAATCCACTCCCAACATTGTCCGCTGTGGGTCCAGCTGCCGGTCTTCTGCCATCTCGTaGTGGTTAGTTTCTTCCTTA | + |
|
Preference number: 5 (lower is better) Translates to: NAACKSTPNIVRCGSSCRSSAIS*WLVSSL Trigger: TAAGGAAGAAACTAACCACAACGAGATGGCAGAAGA...CCGGCAGCTGGACCCACAGCGGACAATGTTGGGAGTGGATTTGCAGGCAGCATT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000018798.7 ENSMUST00000065433.12 ENSMUST00000076700.11 |
||
| CDS-3UTR CAA 90 bp | GCTCTCCAATCCCTTCCCTTCAGCACATTGCACAACTTGTCCAGACACCATATTTCCGATGACACAGACTaGGCCTTGGACAGCAGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: ALQSLPFSTLHNLSRHHISDDTD*ALDSSS Trigger: GCTGCTGCTGTCCAAGGCCAAGTCTGTGTCATCGGA...AATATGGTGTCTGGACAAGTTGTGCAATGTGCTGAAGGGAAGGGATTGGAGAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065433.12 ENSMUST00000076700.11 |
||
| CDS-3UTR CAA 90 bp | CATATCCGGGAAACCTCAGCTACCAGTGAACAAAACTGGCTAGAAGGATGGATGCGGCAGTGTTCGCACTaGTACACCTTCAGCTGCTCG | + |
|
Preference number: 5 (lower is better) Translates to: HIRETSATSEQNWLEGWMRQCSH*YTFSCS Trigger: CGAGCAGCTGAAGGTGTACAAGTGCGAACACTGCCG...CATCCATCCTTCTAGCCAGTTTTGTTCACTGGTAGCTGAGGTTTCCCGGATATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065433.12 ENSMUST00000076700.11 |
||
| CDS-3UTR CAA 90 bp | TCTTGGTCTGGCTATACCAGATCCCACCTCTACCTTTCTGTGATATGGTGGGCACTCTCTGCTCCTATCTaGCACAGGTCTTCTGCCATC | + |
|
Preference number: 5 (lower is better) Translates to: SWSGYTRSHLYLSVIWWALSAPI*HRSSAI Trigger: GATGGCAGAAGACCTGTGCAAGATAGGAGCAGAGAG...TGCCCACCATATCACAGAAAGGTAGAGGTGGGATCTGGTATAGCCAGACCAAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065433.12 ENSMUST00000076700.11 |
||
| CDS-3UTR CAA 90 bp | ACAGGAACCAGGATAACTGAGGATGGGGCTTGGAAGAAAGCTTTGGCTTCCAAGGACACAGACTTGGCCTaGGACAGCAGCAGCAAGTTA | + |
|
Preference number: 5 (lower is better) Translates to: TGTRITEDGAWKKALASKDTDLA*DSSSKL Trigger: TAACTTGCTGCTGCTGTCCAAGGCCAAGTCTGTGTC...CTTGGAAGCCAAAGCTTTCTTCCAAGCCCCATCCTCAGTTATCCTGGTTCCTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065433.12 ENSMUST00000076700.11 |
||
| CDS CCA 90 bp | CCTGGTCCATCACGTGGGATGTCATCATATCCTCCTTCTCATAGTTaGCACTGTCATAGGGCATGTCTGACAGGCACTTGTCTCCAAGAA | + |
|
Preference number: 5 (lower is better) Translates to: PGPSRGMSSYPPSHS*HCHRACLTGTCLQE Trigger: TTCTTGGAGACAAGTGCCTGTCAGACATGCCCTATGACAGTGCCAACTATGAGAAGGAGGATATGATGACATCCCACGTGATGGACCAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000018798.7 ENSMUST00000065433.12 ENSMUST00000076700.11 |
||
| CDS-3UTR CAA 90 bp | TGTGGGTCCAGCTGCCGGGAAGGAGGCATAACCAGCTATCTTTGTGCTTCAGTGTCTTCTGCCATCTCGTaGTGGTTAGTTTCTTCCTTA | + |
|
Preference number: 5 (lower is better) Translates to: CGSSCREGGITSYLCASVSSAIS*WLVSSL Trigger: TAAGGAAGAAACTAACCACAACGAGATGGCAGAAGA...CACTGAAGCACAAAGATAGCTGGTTATGCCTCCTTCCCGGCAGCTGGACCCACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000018798.7 ENSMUST00000065433.12 ENSMUST00000076700.11 |
||
| CDS-3UTR CAA 90 bp | TCTTGGTCTGGCTATACCAGATCCCACCTCTACCTTTCTGTGATATGGTGGGCAATAGAGCTCTTACGTTaGGCGACATTGCTTGCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: SWSGYTRSHLYLSVIWWAIELLR*ATLLAS Trigger: GCTGGCAAGCAATGTCGCCAAACGTAAGAGCTCTAT...TGCCCACCATATCACAGAAAGGTAGAGGTGGGATCTGGTATAGCCAGACCAAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065433.12 ENSMUST00000076700.11 |
||
| CDS GCA 90 bp | GTCCAGGACAAGGGACCTCTCTGCTCCTATCTTGCACAGGTCTTCTaGCATCTCGTTGTGGTTAGTTTCTTCCTTAATGACTGGGTACAT | + |
|
Preference number: 5 (lower is better) Translates to: VQDKGPLCSYLAQVF*HLVVVSFFLNDWVH Trigger: ATGTACCCAGTCATTAAGGAAGAAACTAACCACAACGAGATGGCAGAAGACCTGTGCAAGATAGGAGCAGAGAGGTCCCTTGTCCTGGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000018798.7 ENSMUST00000048122.13 ENSMUST00000065433.12 ENSMUST00000076700.11 |
||
| CDS-3UTR CAA 90 bp | CTTCCAACGCAAATCAAACGCCAAACAACCAACATAAAAGAACAAATGCTGCCTGAGGCCCCACACTGGTaGCACTGGAAAGGCCGTTCA | + |
|
Preference number: 5 (lower is better) Translates to: LPTQIKRQTTNIKEQMLPEAPHW*HWKGRS Trigger: TGAACGGCCTTTCCAGTGCAACCAGTGTGGGGCCTC...AGGCAGCATTTGTTCTTTTATGTTGGTTGTTTGGCGTTTGATTTGCGTTGGAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000018798.7 ENSMUST00000065433.12 ENSMUST00000076700.11 |
||
| CDS-3UTR CAA 90 bp | CTTAATAGTCTTTCAAAGTTCAACCTTTGGCCTTGGTCTCTGCACAGGCTGATGATGTGCCGCAGGAGGTaGCCTTTCTGGGTAAAGGAG | + |
|
Preference number: 5 (lower is better) Translates to: LNSLSKFNLWPWSLHRLMMCRRR*PFWVKE Trigger: CTCCTTTACCCAGAAAGGCAACCTCCTGCGGCACAT...CATCAGCCTGTGCAGAGACCAAGGCCAAAGGTTGAACTTTGAAAGACTATTAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065433.12 ENSMUST00000076700.11 |
||
| CDS-3UTR CAA 90 bp | CCAACGCAAATCAAACGCCAAACAACCAACATAAAAGAACAAATGCTGCCTGCATCCGATGACACAGACTaGGCCTTGGACAGCAGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: PTQIKRQTTNIKEQMLPASDDTD*ALDSSS Trigger: GCTGCTGCTGTCCAAGGCCAAGTCTGTGTCATCGGA...TGCAGGCAGCATTTGTTCTTTTATGTTGGTTGTTTGGCGTTTGATTTGCGTTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000018798.7 ENSMUST00000065433.12 ENSMUST00000076700.11 |
||
| CDS-3UTR CAA 90 bp | TCCAACGCAAATCAAACGCCAAACAACCAACATAAAAGAACAAATGCTGCCTGCATGTGCCGCAGGAGGTaGCCTTTCTGGGTAAAGGAG | + |
|
Preference number: 5 (lower is better) Translates to: SNANQTPNNQHKRTNAACMCRRR*PFWVKE Trigger: CTCCTTTACCCAGAAAGGCAACCTCCTGCGGCACAT...GCAGGCAGCATTTGTTCTTTTATGTTGGTTGTTTGGCGTTTGATTTGCGTTGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000018798.7 ENSMUST00000065433.12 ENSMUST00000076700.11 |
||
| CDS-3UTR CAA 90 bp | TCCAACGCAAATCAAACGCCAAACAACCAACATAAAAGAACAAATGCTGCCTGCTTACGTTTGGCGACATaGCTTGCCAGCCTGTCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: SNANQTPNNQHKRTNAACLRLAT*LASLSR Trigger: CCTGGACAGGCTGGCAAGCAATGTCGCCAAACGTAA...GCAGGCAGCATTTGTTCTTTTATGTTGGTTGTTTGGCGTTTGATTTGCGTTGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000018798.7 ENSMUST00000065433.12 ENSMUST00000076700.11 |
||
| CDS-3UTR CAA 90 bp | CCAACGCAAATCAAACGCCAAACAACCAACATAAAAGAACAAATGCTGCCTGCATTACGTTTGGCGACATaGCTTGCCAGCCTGTCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: PTQIKRQTTNIKEQMLPALRLAT*LASLSR Trigger: CCTGGACAGGCTGGCAAGCAATGTCGCCAAACGTAA...TGCAGGCAGCATTTGTTCTTTTATGTTGGTTGTTTGGCGTTTGATTTGCGTTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000018798.7 ENSMUST00000065433.12 ENSMUST00000076700.11 |
||
| CDS-3UTR CAA 90 bp | GTCTCCAAACATTACAACATTCTAATACCTCCACTTGATAAAGGTTGCATGGCCTTGAGAGCCAGCCCATaGCGTGCATGCGGGTTGATG | + |
|
Preference number: 5 (lower is better) Translates to: VSKHYNILIPPLDKGCMALRASP*RACGLM Trigger: CATCAACCCGCATGCACGCAATGGGCTGGCTCTCAA...GGCCATGCAACCTTTATCAAGTGGAGGTATTAGAATGTTGTAATGTTTGGAGAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065433.12 ENSMUST00000076700.11 |
||
| CDS-3UTR CAA 90 bp | GTCTCCAAACATTACAACATTCTAATACCTCCACTTGATAAAGGTTGCATGGCCCGGCAGTGTTCGCACTaGTACACCTTCAGCTGCTCG | + |
|
Preference number: 5 (lower is better) Translates to: VSKHYNILIPPLDKGCMARQCSH*YTFSCS Trigger: CGAGCAGCTGAAGGTGTACAAGTGCGAACACTGCCG...GGCCATGCAACCTTTATCAAGTGGAGGTATTAGAATGTTGTAATGTTTGGAGAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065433.12 ENSMUST00000076700.11 |
||
| CDS GCA 90 bp | TTTGGGAATTATTGCATGAAAATCCCTAAAGCCATCAGCCCCATATaGAACCATGCCTCGATCACTCTTGGAGTTCTGCTGTGCTCCAGA | + |
|
Preference number: 5 (lower is better) Translates to: FGNYCMKIPKAISPI*NHASITLGVLLCSR Trigger: TCTGGAGCACAGCAGAACTCCAAGAGTGATCGAGGCATGGTTGCATATGGGGCTGATGGCTTTAGGGATTTTCATGCAATAATTCCCAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065433.12 |
||
| CDS-3UTR CAA 90 bp | AACGCAAATCAAACGCCAAACAACCAACATAAAAGAACAAATGCTGCCTGCAAATCCGATGACACAGACTaGGCCTTGGACAGCAGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: NANQTPNNQHKRTNAACKSDDTD*ALDSSS Trigger: GCTGCTGCTGTCCAAGGCCAAGTCTGTGTCATCGGA...TTTGCAGGCAGCATTTGTTCTTTTATGTTGGTTGTTTGGCGTTTGATTTGCGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000018798.7 ENSMUST00000065433.12 ENSMUST00000076700.11 |
||
| CDS TCA 90 bp | CATCATATCCTCCTTCTCATAGTTGGCACTGTCATAGGGCATGTCTaGCAGGCACTTGTCTCCAAGAAATTTCTGAGGCATAGAGCTCTT | + |
|
Preference number: 5 (lower is better) Translates to: HHILLLIVGTVIGHV*QALVSKKFLRHRAL Trigger: AAGAGCTCTATGCCTCAGAAATTTCTTGGAGACAAGTGCCTGTCAGACATGCCCTATGACAGTGCCAACTATGAGAAGGAGGATATGATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000018798.7 ENSMUST00000065433.12 ENSMUST00000076700.11 |
||
| CDS-3UTR CAA 90 bp | AACGCAAATCAAACGCCAAACAACCAACATAAAAGAACAAATGCTGCCTGCAAAATGTGCCGCAGGAGGTaGCCTTTCTGGGTAAAGGAG | + |
|
Preference number: 5 (lower is better) Translates to: NANQTPNNQHKRTNAACKMCRRR*PFWVKE Trigger: CTCCTTTACCCAGAAAGGCAACCTCCTGCGGCACAT...TTTGCAGGCAGCATTTGTTCTTTTATGTTGGTTGTTTGGCGTTTGATTTGCGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000018798.7 ENSMUST00000065433.12 ENSMUST00000076700.11 |
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| CDS-3UTR CAA 90 bp | GTCTCCAAACATTACAACATTCTAATACCTCCACTTGATAAAGGTTGCATGGCCCTCTCTGCTCCTATCTaGCACAGGTCTTCTGCCATC | + |
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Preference number: 5 (lower is better) Translates to: VSKHYNILIPPLDKGCMALSAPI*HRSSAI Trigger: GATGGCAGAAGACCTGTGCAAGATAGGAGCAGAGAG...GGCCATGCAACCTTTATCAAGTGGAGGTATTAGAATGTTGTAATGTTTGGAGAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065433.12 ENSMUST00000076700.11 |
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| CDS-3UTR CAA 90 bp | CCAACGCAAATCAAACGCCAAACAACCAACATAAAAGAACAAATGCTGCCTGCAAACTTGGGACATGTCTaGACCCTCATCGACATCCAT | + |
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Preference number: 5 (lower is better) Translates to: PTQIKRQTTNIKEQMLPANLGHV*TLIDIH Trigger: ATGGATGTCGATGAGGGTCAAGACATGTCCCAAGTT...TGCAGGCAGCATTTGTTCTTTTATGTTGGTTGTTTGGCGTTTGATTTGCGTTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000018798.7 ENSMUST00000065433.12 ENSMUST00000076700.11 |
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| CDS-3UTR CAA 90 bp | GTCTCCAAACATTACAACATTCTAATACCTCCACTTGATAAAGGTTGCATGGCCAACTTGGGACATGTCTaGACCCTCATCGACATCCAT | + |
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Preference number: 5 (lower is better) Translates to: VSKHYNILIPPLDKGCMANLGHV*TLIDIH Trigger: ATGGATGTCGATGAGGGTCAAGACATGTCCCAAGTT...GGCCATGCAACCTTTATCAAGTGGAGGTATTAGAATGTTGTAATGTTTGGAGAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065433.12 ENSMUST00000076700.11 |
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| CDS-3UTR CAA 90 bp | ACGCAAATCAAACGCCAAACAACCAACATAAAAGAACAAATGCTGCCTGCAAATATAGAGCTCTTACGTTaGGCGACATTGCTTGCCAGC | + |
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Preference number: 5 (lower is better) Translates to: TQIKRQTTNIKEQMLPANIELLR*ATLLAS Trigger: GCTGGCAAGCAATGTCGCCAAACGTAAGAGCTCTAT...ATTTGCAGGCAGCATTTGTTCTTTTATGTTGGTTGTTTGGCGTTTGATTTGCGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000018798.7 ENSMUST00000065433.12 ENSMUST00000076700.11 |
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| CDS TCA 90 bp | TCTTCCCCATTCATTTCACAGGCACGCCCATTCTCTTCATCACTCTaGGTCTCTACTTTAACATTACTGGGAGAGAAAGATTTGGGAATT | + |
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Preference number: 5 (lower is better) Translates to: SSPFISQARPFSSSL*VSTLTLLGEKDLGI Trigger: AATTCCCAAATCTTTCTCTCCCAGTAATGTTAAAGTAGAGACTCAGAGTGATGAAGAGAATGGGCGTGCCTGTGAAATGAATGGGGAAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065433.12 |
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| CDS TCA 90 bp | TCTACTTTAACATTACTGGGAGAGAAAGATTTGGGAATTATTGCATaGAAATCCCTAAAGCCATCAGCCCCATATGCAACCATGCCTCGA | + |
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Preference number: 5 (lower is better) Translates to: STLTLLGEKDLGIIA*KSLKPSAPYATMPR Trigger: TCGAGGCATGGTTGCATATGGGGCTGATGGCTTTAGGGATTTTCATGCAATAATTCCCAAATCTTTCTCTCCCAGTAATGTTAAAGTAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065433.12 |
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| CDS TCA 72 bp | CGTGCTGACCACACGGAAGGCATCCTGCGAGTTCTCTaGGGCCGCCCTCAGCACCTCGTAGGCGCGCTGCTC | + |
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Preference number: 6 (lower is better) Translates to: RADHTEGILRVL*GRPQHLVGALL Trigger: GAGCAGCGCGCCTACGAGGTGCTGAGGGCGGCCTCAGAGAACTCGCAGGATGCCTTCCGTGTGGTCAGCACG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000018798.7 ENSMUST00000065433.12 ENSMUST00000076700.11 |
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| CDS CCA 72 bp | CGCTGCGCTGTTCCTCCGCGTTGCTCTCTGTATCTGTaGAGTCTTGGCAGCTGTTGCTCGGGGAGGCCTCTC | + |
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Preference number: 6 (lower is better) Translates to: RCAVPPRCSLYL*SLGSCCSGRPL Trigger: GAGAGGCCTCCCCGAGCAACAGCTGCCAAGACTCCACAGATACAGAGAGCAACGCGGAGGAACAGCGCAGCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000018798.7 ENSMUST00000065433.12 ENSMUST00000076700.11 |
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| CDS CAA 90 bp | TGGCAGCTGTTGCTCGGGGAGGCCTCTCGCTCCGATGACACAGACTaGGCCTTGGACAGCAGCAGCAAGTTATCCACGGCGTCCTGTGCT | + |
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Preference number: 6 (lower is better) Translates to: WQLLLGEASRSDDTD*ALDSSSKLSTASCA Trigger: AGCACAGGACGCCGTGGATAACTTGCTGCTGCTGTCCAAGGCCAAGTCTGTGTCATCGGAGCGAGAGGCCTCCCCGAGCAACAGCTGCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000018798.7 ENSMUST00000065433.12 ENSMUST00000076700.11 |
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| CDS GCA 72 bp | AGCACGCGGCAGTGTTCGCACTTGTACACCTTCAGCTaGTCGCCACTCGTGCTGACCACACGGAAGGCATCC | + |
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Preference number: 6 (lower is better) Translates to: STRQCSHLYTFS*SPLVLTTRKAS Trigger: GGATGCCTTCCGTGTGGTCAGCACGAGTGGCGAGCAGCTGAAGGTGTACAAGTGCGAACACTGCCGCGTGCT 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000018798.7 ENSMUST00000065433.12 ENSMUST00000076700.11 |
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| CDS CCA 72 bp | GGGAGGCCTCTCGCTCCGATGACACAGACTTGGCCTTaGACAGCAGCAGCAAGTTATCCACGGCGTCCTGTG | + |
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Preference number: 6 (lower is better) Translates to: GRPLAPMTQTWP*TAAASYPRRPV Trigger: CACAGGACGCCGTGGATAACTTGCTGCTGCTGTCCAAGGCCAAGTCTGTGTCATCGGAGCGAGAGGCCTCCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000018798.7 ENSMUST00000065433.12 ENSMUST00000076700.11 |
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| CDS CCA 72 bp | TGCTCGGGGAGGCCTCTCGCTCCGATGACACAGACTTaGCCTTGGACAGCAGCAGCAAGTTATCCACGGCGT | + |
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Preference number: 6 (lower is better) Translates to: CSGRPLAPMTQT*PWTAAASYPRR Trigger: ACGCCGTGGATAACTTGCTGCTGCTGTCCAAGGCCAAGTCTGTGTCATCGGAGCGAGAGGCCTCCCCGAGCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000018798.7 ENSMUST00000065433.12 ENSMUST00000076700.11 |
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| CDS CAA 90 bp | CTGTTGCTCGGGGAGGCCTCTCGCTCCGATGACACAGACTTGGCCTaGGACAGCAGCAGCAAGTTATCCACGGCGTCCTGTGCTGAATGG | + |
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Preference number: 6 (lower is better) Translates to: LLLGEASRSDDTDLA*DSSSKLSTASCAEW Trigger: CCATTCAGCACAGGACGCCGTGGATAACTTGCTGCTGCTGTCCAAGGCCAAGTCTGTGTCATCGGAGCGAGAGGCCTCCCCGAGCAACAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000018798.7 ENSMUST00000065433.12 ENSMUST00000076700.11 |
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| CDS TCA 72 bp | CGCACTTGTACACCTTCAGCTGCTCGCCACTCGTGCTaGCCACACGGAAGGCATCCTGCGAGTTCTCTGAGG | + |
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Preference number: 6 (lower is better) Translates to: RTCTPSAARHSC*PHGRHPASSLR Trigger: CCTCAGAGAACTCGCAGGATGCCTTCCGTGTGGTCAGCACGAGTGGCGAGCAGCTGAAGGTGTACAAGTGCG 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000018798.7 ENSMUST00000065433.12 ENSMUST00000076700.11 |
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| CDS CAA 90 bp | TGCCGCAGGAGGTTGCCTTTCTGGGTAAAGGAGGCCCCACACTGGTaGCACTGGAAAGGCCGTTCACCCATGCCTCGATCACTCTTGGAG | + |
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Preference number: 6 (lower is better) Translates to: CRRRLPFWVKEAPHW*HWKGRSPMPRSLLE Trigger: CTCCAAGAGTGATCGAGGCATGGGTGAACGGCCTTTCCAGTGCAACCAGTGTGGGGCCTCCTTTACCCAGAAAGGCAACCTCCTGCGGCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000018798.7 ENSMUST00000048122.13 ENSMUST00000126058.8 |
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| CDS GCA 72 bp | ACTGGCCATGCCTCGATCACTCTTGGAGTTCTGCTGTaGTCCAGAGGTAGTGGACAGGTCCTCAGGGACAGG | + |
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Preference number: 6 (lower is better) Translates to: TGHASITLGVLL*SRGSGQVLRDR Trigger: CCTGTCCCTGAGGACCTGTCCACTACCTCTGGAGCACAGCAGAACTCCAAGAGTGATCGAGGCATGGCCAGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076700.11 |
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| CDS GCA 72 bp | TTCACCCATGCCTCGATCACTCTTGGAGTTCTGCTGTaGTCCAGAGGTAGTGGACAGGTCCTCAGGGACAGG | + |
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Preference number: 6 (lower is better) Translates to: FTHASITLGVLL*SRGSGQVLRDR Trigger: CCTGTCCCTGAGGACCTGTCCACTACCTCTGGAGCACAGCAGAACTCCAAGAGTGATCGAGGCATGGGTGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000018798.7 ENSMUST00000048122.13 ENSMUST00000126058.8 |
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| CDS GCA 72 bp | CTGAGGCATAGAGCTCTTACGTTTGGCGACATTGCTTaGCAGCCTGTCCAGGACAAGGGACCTCTCTGCTCC | + |
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Preference number: 6 (lower is better) Translates to: LRHRALTFGDIA*QPVQDKGPLCS Trigger: GGAGCAGAGAGGTCCCTTGTCCTGGACAGGCTGGCAAGCAATGTCGCCAAACGTAAGAGCTCTATGCCTCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000018798.7 ENSMUST00000048122.13 ENSMUST00000065433.12 ENSMUST00000076700.11 |
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| CDS GCA 72 bp | TGCAACCATGCCTCGATCACTCTTGGAGTTCTGCTGTaGTCCAGAGGTAGTGGACAGGTCCTCAGGGACAGG | + |
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Preference number: 6 (lower is better) Translates to: CNHASITLGVLL*SRGSGQVLRDR Trigger: CCTGTCCCTGAGGACCTGTCCACTACCTCTGGAGCACAGCAGAACTCCAAGAGTGATCGAGGCATGGTTGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065433.12 |
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| CDS CAA 72 bp | CACTGGAAAGGCCGTTCACCCATGCCTCGATCACTCTaGGAGTTCTGCTGTGCTCCAGAGGTAGTGGACAGG | + |
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Preference number: 6 (lower is better) Translates to: HWKGRSPMPRSL*EFCCAPEVVDR Trigger: CCTGTCCACTACCTCTGGAGCACAGCAGAACTCCAAGAGTGATCGAGGCATGGGTGAACGGCCTTTCCAGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000018798.7 ENSMUST00000048122.13 ENSMUST00000126058.8 |
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| CDS CAA 72 bp | AGGTTGCCTTTCTGGGTAAAGGAGGCCCCACACTGGTaGCACTGGAAAGGCCGTTCACCCATGCCTCGATCA | + |
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Preference number: 6 (lower is better) Translates to: RLPFWVKEAPHW*HWKGRSPMPRS Trigger: TGATCGAGGCATGGGTGAACGGCCTTTCCAGTGCAACCAGTGTGGGGCCTCCTTTACCCAGAAAGGCAACCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000018798.7 ENSMUST00000048122.13 ENSMUST00000126058.8 |
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| CDS CAA 72 bp | CCATCAGCCCCATATGCAACCATGCCTCGATCACTCTaGGAGTTCTGCTGTGCTCCAGAGGTAGTGGACAGG | + |
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Preference number: 6 (lower is better) Translates to: PSAPYATMPRSL*EFCCAPEVVDR Trigger: CCTGTCCACTACCTCTGGAGCACAGCAGAACTCCAAGAGTGATCGAGGCATGGTTGCATATGGGGCTGATGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065433.12 |
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| CDS GCA 72 bp | ATTGCTTGCCAGCCTGTCCAGGACAAGGGACCTCTCTaGTCCTATCTTGCACAGGTCTTCTGCCATCTCGTT | + |
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Preference number: 6 (lower is better) Translates to: IACQPVQDKGPL*SYLAQVFCHLV Trigger: AACGAGATGGCAGAAGACCTGTGCAAGATAGGAGCAGAGAGGTCCCTTGTCCTGGACAGGCTGGCAAGCAAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000018798.7 ENSMUST00000048122.13 ENSMUST00000065433.12 ENSMUST00000076700.11 |
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| CDS CAA 72 bp | AGCCTGTCCAGGACAAGGGACCTCTCTGCTCCTATCTaGCACAGGTCTTCTGCCATCTCGTTGTGGTTAGTT | + |
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Preference number: 6 (lower is better) Translates to: SLSRTRDLSAPI*HRSSAISLWLV Trigger: AACTAACCACAACGAGATGGCAGAAGACCTGTGCAAGATAGGAGCAGAGAGGTCCCTTGTCCTGGACAGGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000018798.7 ENSMUST00000048122.13 ENSMUST00000065433.12 ENSMUST00000076700.11 |
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| CDS CAA 90 bp | TTGCTTGCCAGCCTGTCCAGGACAAGGGACCTCTCTGCTCCTATCTaGCACAGGTCTTCTGCCATCTCGTTGTGGTTAGTTTCTTCCTTA | + |
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Preference number: 6 (lower is better) Translates to: LLASLSRTRDLSAPI*HRSSAISLWLVSSL Trigger: TAAGGAAGAAACTAACCACAACGAGATGGCAGAAGACCTGTGCAAGATAGGAGCAGAGAGGTCCCTTGTCCTGGACAGGCTGGCAAGCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000018798.7 ENSMUST00000048122.13 ENSMUST00000065433.12 ENSMUST00000076700.11 |
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| CDS CAA 72 bp | TCTACTTTAACATTACTGGCCATGCCTCGATCACTCTaGGAGTTCTGCTGTGCTCCAGAGGTAGTGGACAGG | + |
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Preference number: 6 (lower is better) Translates to: STLTLLAMPRSL*EFCCAPEVVDR Trigger: CCTGTCCACTACCTCTGGAGCACAGCAGAACTCCAAGAGTGATCGAGGCATGGCCAGTAATGTTAAAGTAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076700.11 |
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| CDS CCA 72 bp | TCACGTGGGATGTCATCATATCCTCCTTCTCATAGTTaGCACTGTCATAGGGCATGTCTGACAGGCACTTGT | + |
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Preference number: 6 (lower is better) Translates to: SRGMSSYPPSHS*HCHRACLTGTC Trigger: ACAAGTGCCTGTCAGACATGCCCTATGACAGTGCCAACTATGAGAAGGAGGATATGATGACATCCCACGTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000018798.7 ENSMUST00000065433.12 ENSMUST00000076700.11 |
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| CDS TCA 72 bp | GGCATGTCTGACAGGCACTTGTCTCCAAGAAATTTCTaGGGCATAGAGCTCTTACGTTTGGCGACATTGCTT | + |
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Preference number: 6 (lower is better) Translates to: GMSDRHLSPRNF*GIELLRLATLL Trigger: AAGCAATGTCGCCAAACGTAAGAGCTCTATGCCTCAGAAATTTCTTGGAGACAAGTGCCTGTCAGACATGCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000018798.7 ENSMUST00000065433.12 ENSMUST00000076700.11 |
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| CDS TCA 72 bp | CTCCTTCTCATAGTTGGCACTGTCATAGGGCATGTCTaGCAGGCACTTGTCTCCAAGAAATTTCTGAGGCAT | + |
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Preference number: 6 (lower is better) Translates to: LLLIVGTVIGHV*QALVSKKFLRH Trigger: ATGCCTCAGAAATTTCTTGGAGACAAGTGCCTGTCAGACATGCCCTATGACAGTGCCAACTATGAGAAGGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000018798.7 ENSMUST00000065433.12 ENSMUST00000076700.11 |
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| CDS GCA 72 bp | AAGGGACCTCTCTGCTCCTATCTTGCACAGGTCTTCTaGCATCTCGTTGTGGTTAGTTTCTTCCTTAATGAC | + |
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Preference number: 6 (lower is better) Translates to: KGPLCSYLAQVF*HLVVVSFFLND Trigger: GTCATTAAGGAAGAAACTAACCACAACGAGATGGCAGAAGACCTGTGCAAGATAGGAGCAGAGAGGTCCCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000018798.7 ENSMUST00000048122.13 ENSMUST00000065433.12 ENSMUST00000076700.11 |
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| CDS GCA 72 bp | TATTGCATGAAAATCCCTAAAGCCATCAGCCCCATATaGAACCATGCCTCGATCACTCTTGGAGTTCTGCTG | + |
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Preference number: 6 (lower is better) Translates to: YCMKIPKAISPI*NHASITLGVLL Trigger: CAGCAGAACTCCAAGAGTGATCGAGGCATGGTTGCATATGGGGCTGATGGCTTTAGGGATTTTCATGCAATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065433.12 |
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| CDS TCA 72 bp | TTCATTTCACAGGCACGCCCATTCTCTTCATCACTCTaGGTCTCTACTTTAACATTACTGGGAGAGAAAGAT | + |
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Preference number: 6 (lower is better) Translates to: FISQARPFSSSL*VSTLTLLGEKD Trigger: ATCTTTCTCTCCCAGTAATGTTAAAGTAGAGACTCAGAGTGATGAAGAGAATGGGCGTGCCTGTGAAATGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065433.12 |
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