Pregenerated sensors for IKBKE (Mus musculus)
Ensembl gene IDs: ENSMUSG00000042349Ensembl transcript IDs: ENSMUST00000062108.10, ENSMUST00000159195.2, ENSMUST00000161764.8
Found 212 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR CCA 90 bp | GCAGCACAGGAAACAACCAAGAATAAGCATTCTGATCCAGCACCCTaGAGAGGCAGGAGAAGCCACAGGAGACGCCTGCTGGTCCTGGGA | + |
Preference number: 1 (lower is better) Translates to: AAQETTKNKHSDPAP*RGRRSHRRRLLVLG Trigger: TCCCAGGACCAGCAGGCGTCTCCTGTGGCTTCTCCTGCCTCTCCAGGGTGCTGGATCAGAATGCTTATTCTTGGTTGTTTCCTGTGCTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062108.10 ENSMUST00000161764.8 |
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3UTR CCA 90 bp | GCTCTCTCCTTAGGACTTTGGGTTCCAACATCTGTCCAGTTAGCATaGCTGTGGTTGATACTGACCAGCTGTTTCTTAGAACCAAGCGTT | + |
Preference number: 1 (lower is better) Translates to: ALSLGLWVPTSVQLA*LWLILTSCFLEPSV Trigger: AACGCTTGGTTCTAAGAAACAGCTGGTCAGTATCAACCACAGCCATGCTAACTGGACAGATGTTGGAACCCAAAGTCCTAAGGAGAGAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062108.10 ENSMUST00000161764.8 |
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3UTR TCA 90 bp | GGCCAAGAGGGAGGTAGGCTAGTGAGATGGAACCAGAACTTGCCCTaGATTTGGTCTCACAGTGTAGGGGTACAATATGAATGTTTCTAT | + |
Preference number: 1 (lower is better) Translates to: GQEGGRLVRWNQNLP*IWSHSVGVQYECFY Trigger: ATAGAAACATTCATATTGTACCCCTACACTGTGAGACCAAATTCAGGGCAAGTTCTGGTTCCATCTCACTAGCCTACCTCCCTCTTGGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062108.10 ENSMUST00000161764.8 |
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3UTR GCA 90 bp | AACAGAAAAGGCGATGTATTTATTCCATGTCTGAAGGTGCAGGCCTaGTCTCTCCTTAGGACTTTGGGTTCCAACATCTGTCCAGTTAGC | + |
Preference number: 1 (lower is better) Translates to: NRKGDVFIPCLKVQA*SLLRTLGSNICPVS Trigger: GCTAACTGGACAGATGTTGGAACCCAAAGTCCTAAGGAGAGAGCAGGCCTGCACCTTCAGACATGGAATAAATACATCGCCTTTTCTGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062108.10 ENSMUST00000161764.8 |
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3UTR-3UTR CCA 90 bp | GAGCGTGAGAGGGCTGAGCCTTTTCTTTCCAAGACCAGACCTCCAGAGCCTGGGTCTGTAGATACTGCCTaGGATGGCCAGGAGTCCCTG | + |
Preference number: 2 (lower is better) Translates to: ERERAEPFLSKTRPPEPGSVDTA*DGQESL Trigger: CAGGGACTCCTGGCCATCCCAGGCAGTATCTACAGA...CCCAGGCTCTGGAGGTCTGGTCTTGGAAAGAAAAGGCTCAGCCCTCTCACGCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062108.10 ENSMUST00000161764.8 |
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3UTR-3UTR TCA 90 bp | CTCTCCTTAGGACTTTGGGTTCCAACATCTGTCCAGTTAGCATGGCTGTGGTTGCGTTTGTGGGTTGCCTaGGGCCAGGGATGGGGACAC | + |
Preference number: 2 (lower is better) Translates to: LSLGLWVPTSVQLAWLWLRLWVA*GQGWGH Trigger: GTGTCCCCATCCCTGGCCTCAGGCAACCCACAAACG...CAACCACAGCCATGCTAACTGGACAGATGTTGGAACCCAAAGTCCTAAGGAGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062108.10 ENSMUST00000161764.8 |
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3UTR-3UTR CCA 90 bp | CTCAACCACCCACTTTCTCAAATGCAGGTGCATCTAGACCAAGCACAGAGGGGCTCTGATCCAGCACCCTaGAGAGGCAGGAGAAGCCAC | + |
Preference number: 2 (lower is better) Translates to: LNHPLSQMQVHLDQAQRGSDPAP*RGRRSH Trigger: GTGGCTTCTCCTGCCTCTCCAGGGTGCTGGATCAGA...GCCCCTCTGTGCTTGGTCTAGATGCACCTGCATTTGAGAAAGTGGGTGGTTGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062108.10 ENSMUST00000161764.8 |
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3UTR-3UTR CCA 90 bp | GAATCCTCAAAGCACCAGCAGTTAGCCTCAACCACCCACTTTCTCAAATGCAGGGACGCCTGCTGGTCCTaGGAAGTGCAGAGCGTGAGA | + |
Preference number: 2 (lower is better) Translates to: ESSKHQQLASTTHFLKCRDACWS*EVQSVR Trigger: TCTCACGCTCTGCACTTCCCAGGACCAGCAGGCGTC...CCTGCATTTGAGAAAGTGGGTGGTTGAGGCTAACTGCTGGTGCTTTGAGGATTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062108.10 ENSMUST00000161764.8 |
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3UTR-3UTR CCA 90 bp | AAGCGTTCCTCGGAGAAAAGGTCAAGGAGAATCCTCAAAGCACCAGCAGTTAGCGACGCCTGCTGGTCCTaGGAAGTGCAGAGCGTGAGA | + |
Preference number: 2 (lower is better) Translates to: KRSSEKRSRRILKAPAVSDACWS*EVQSVR Trigger: TCTCACGCTCTGCACTTCCCAGGACCAGCAGGCGTC...GCTAACTGCTGGTGCTTTGAGGATTCTCCTTGACCTTTTCTCCGAGGAACGCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062108.10 ENSMUST00000161764.8 |
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3UTR-3UTR CCA 90 bp | AAGCGTTCCTCGGAGAAAAGGTCAAGGAGAATCCTCAAAGCACCAGCAGTTAGCACAGGAGACGCCTGCTaGTCCTGGGAAGTGCAGAGC | + |
Preference number: 2 (lower is better) Translates to: KRSSEKRSRRILKAPAVSTGDAC*SWEVQS Trigger: GCTCTGCACTTCCCAGGACCAGCAGGCGTCTCCTGT...GCTAACTGCTGGTGCTTTGAGGATTCTCCTTGACCTTTTCTCCGAGGAACGCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062108.10 ENSMUST00000161764.8 |
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3UTR-3UTR TCA 90 bp | GAATCCTCAAAGCACCAGCAGTTAGCCTCAACCACCCACTTTCTCAAATGCAGGCCTCCAGAGCCTGGGTaGGGAAGAACAGTCTTGGTG | + |
Preference number: 2 (lower is better) Translates to: ESSKHQQLASTTHFLKCRPPEPG*GRTVLV Trigger: CACCAAGACTGTTCTTCCTCACCCAGGCTCTGGAGG...CCTGCATTTGAGAAAGTGGGTGGTTGAGGCTAACTGCTGGTGCTTTGAGGATTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062108.10 ENSMUST00000161764.8 |
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3UTR-3UTR CCA 90 bp | GCACAGGAAACAACCAAGAATAAGCATTCTGATCCAGCACCCTGGAGAGGCAGGTCTGTAGATACTGCCTaGGATGGCCAGGAGTCCCTG | + |
Preference number: 2 (lower is better) Translates to: AQETTKNKHSDPAPWRGRSVDTA*DGQESL Trigger: CAGGGACTCCTGGCCATCCCAGGCAGTATCTACAGA...CCTGCCTCTCCAGGGTGCTGGATCAGAATGCTTATTCTTGGTTGTTTCCTGTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062108.10 ENSMUST00000161764.8 |
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3UTR-3UTR CCA 90 bp | GATGGGGACACTCAGGAAGCAGCACAGGAAACAACCAAGAATAAGCATTCTGATACAGGAGACGCCTGCTaGTCCTGGGAAGTGCAGAGC | + |
Preference number: 2 (lower is better) Translates to: DGDTQEAAQETTKNKHSDTGDAC*SWEVQS Trigger: GCTCTGCACTTCCCAGGACCAGCAGGCGTCTCCTGT...ATCAGAATGCTTATTCTTGGTTGTTTCCTGTGCTGCTTCCTGAGTGTCCCCATC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062108.10 ENSMUST00000161764.8 |
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3UTR-3UTR CCA 90 bp | AAAGCACCAGCAGTTAGCCTCAACCACCCACTTTCTCAAATGCAGGTGCATCTATCTGATCCAGCACCCTaGAGAGGCAGGAGAAGCCAC | + |
Preference number: 2 (lower is better) Translates to: KAPAVSLNHPLSQMQVHLSDPAP*RGRRSH Trigger: GTGGCTTCTCCTGCCTCTCCAGGGTGCTGGATCAGA...TAGATGCACCTGCATTTGAGAAAGTGGGTGGTTGAGGCTAACTGCTGGTGCTTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062108.10 ENSMUST00000161764.8 |
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3UTR-3UTR TCA 90 bp | GCACAGGAAACAACCAAGAATAAGCATTCTGATCCAGCACCCTGGAGAGGCAGGTGTTTCTATTGCTTCTaGGTGCCTTGTGAACCCCCA | + |
Preference number: 2 (lower is better) Translates to: AQETTKNKHSDPAPWRGRCFYCF*VPCEPP Trigger: TGGGGGTTCACAAGGCACTCAGAAGCAATAGAAACA...CCTGCCTCTCCAGGGTGCTGGATCAGAATGCTTATTCTTGGTTGTTTCCTGTGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000062108.10 ENSMUST00000161764.8 |
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3UTR-3UTR TCA 90 bp | AGATACTGCCTGGGATGGCCAGGAGTCCCTGTCCTAGCTGCTTCCCAAGAGGACTGTAGGGGTACAATATaGATGTTTCTATTGCTTCTG | + |
Preference number: 2 (lower is better) Translates to: RYCLGWPGVPVLAASQEDCRGTI*MFLLLL Trigger: CAGAAGCAATAGAAACATTCATATTGTACCCCTACA...GTCCTCTTGGGAAGCAGCTAGGACAGGGACTCCTGGCCATCCCAGGCAGTATCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062108.10 ENSMUST00000161764.8 |
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3UTR-3UTR CCA 90 bp | GAAGCAGCACAGGAAACAACCAAGAATAAGCATTCTGATCCAGCACCCTGGAGACAGACCTCCAGAGCCTaGGTGAGGAAGAACAGTCTT | + |
Preference number: 2 (lower is better) Translates to: EAAQETTKNKHSDPAPWRQTSRA*VRKNSL Trigger: AAGACTGTTCTTCCTCACCCAGGCTCTGGAGGTCTG...TCTCCAGGGTGCTGGATCAGAATGCTTATTCTTGGTTGTTTCCTGTGCTGCTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062108.10 ENSMUST00000161764.8 |
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3UTR-3UTR TCA 90 bp | GAATCCTCAAAGCACCAGCAGTTAGCCTCAACCACCCACTTTCTCAAATGCAGGTGTTTCTATTGCTTCTaGGTGCCTTGTGAACCCCCA | + |
Preference number: 2 (lower is better) Translates to: ESSKHQQLASTTHFLKCRCFYCF*VPCEPP Trigger: TGGGGGTTCACAAGGCACTCAGAAGCAATAGAAACA...CCTGCATTTGAGAAAGTGGGTGGTTGAGGCTAACTGCTGGTGCTTTGAGGATTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000062108.10 ENSMUST00000161764.8 |
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3UTR-3UTR TCA 90 bp | GCACAGGAAACAACCAAGAATAAGCATTCTGATCCAGCACCCTGGAGAGGCAGGTGTAGGGGTACAATATaGATGTTTCTATTGCTTCTG | + |
Preference number: 2 (lower is better) Translates to: AQETTKNKHSDPAPWRGRCRGTI*MFLLLL Trigger: CAGAAGCAATAGAAACATTCATATTGTACCCCTACA...CCTGCCTCTCCAGGGTGCTGGATCAGAATGCTTATTCTTGGTTGTTTCCTGTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062108.10 ENSMUST00000161764.8 |
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3UTR CCA 72 bp | CCTGGAGAGGCAGGAGAAGCCACAGGAGACGCCTGCTaGTCCTGGGAAGTGCAGAGCGTGAGAGGGCTGAGC | + |
Preference number: 3 (lower is better) Translates to: PGEAGEATGDAC*SWEVQSVRGLS Trigger: GCTCAGCCCTCTCACGCTCTGCACTTCCCAGGACCAGCAGGCGTCTCCTGTGGCTTCTCCTGCCTCTCCAGG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062108.10 ENSMUST00000161764.8 |
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3UTR CCA 72 bp | GAGGCAGGAGAAGCCACAGGAGACGCCTGCTGGTCCTaGGAAGTGCAGAGCGTGAGAGGGCTGAGCCTTTTC | + |
Preference number: 3 (lower is better) Translates to: EAGEATGDACWS*EVQSVRGLSLF Trigger: GAAAAGGCTCAGCCCTCTCACGCTCTGCACTTCCCAGGACCAGCAGGCGTCTCCTGTGGCTTCTCCTGCCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062108.10 ENSMUST00000161764.8 |
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3UTR CCA 72 bp | CCAGACCTCCAGAGCCTGGGTGAGGAAGAACAGTCTTaGTGTCTTGATAAGGCTGTGGTAGCCGCATGGTCT | + |
Preference number: 3 (lower is better) Translates to: PDLQSLGEEEQS*CLDKAVVAAWS Trigger: AGACCATGCGGCTACCACAGCCTTATCAAGACACCAAGACTGTTCTTCCTCACCCAGGCTCTGGAGGTCTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062108.10 ENSMUST00000161764.8 |
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3UTR CCA 72 bp | GAAACAACCAAGAATAAGCATTCTGATCCAGCACCCTaGAGAGGCAGGAGAAGCCACAGGAGACGCCTGCTG | + |
Preference number: 3 (lower is better) Translates to: ETTKNKHSDPAP*RGRRSHRRRLL Trigger: CAGCAGGCGTCTCCTGTGGCTTCTCCTGCCTCTCCAGGGTGCTGGATCAGAATGCTTATTCTTGGTTGTTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062108.10 ENSMUST00000161764.8 |
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3UTR-3UTR CAA 90 bp | GTGAGAGGGCTGAGCCTTTTCTTTCCAAGACCAGACCTCCAGAGCCTGGGTGAGCAAAGTAATGCTAGTTaGTTGGCCAATGGCCAATGG | + |
Preference number: 3 (lower is better) Translates to: VRGLSLFFPRPDLQSLGEQSNAS*LANGQW Trigger: CCATTGGCCATTGGCCAACAAACTAGCATTACTTTG...CTCACCCAGGCTCTGGAGGTCTGGTCTTGGAAAGAAAAGGCTCAGCCCTCTCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062108.10 ENSMUST00000161764.8 |
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3UTR-3UTR CAA 90 bp | TTCTTTCCAAGACCAGACCTCCAGAGCCTGGGTGAGGAAGAACAGTCTTGGTGTCAAAGTAATGCTAGTTaGTTGGCCAATGGCCAATGG | + |
Preference number: 3 (lower is better) Translates to: FFPRPDLQSLGEEEQSWCQSNAS*LANGQW Trigger: CCATTGGCCATTGGCCAACAAACTAGCATTACTTTG...ACACCAAGACTGTTCTTCCTCACCCAGGCTCTGGAGGTCTGGTCTTGGAAAGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062108.10 ENSMUST00000161764.8 |
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3UTR TCA 72 bp | GGAGGTAGGCTAGTGAGATGGAACCAGAACTTGCCCTaGATTTGGTCTCACAGTGTAGGGGTACAATATGAA | + |
Preference number: 3 (lower is better) Translates to: GGRLVRWNQNLP*IWSHSVGVQYE Trigger: TTCATATTGTACCCCTACACTGTGAGACCAAATTCAGGGCAAGTTCTGGTTCCATCTCACTAGCCTACCTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062108.10 ENSMUST00000161764.8 |
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3UTR TCA 72 bp | AGGAAAACAGAAAAGGCGATGTATTTATTCCATGTCTaGAGGTGCAGGCCTGCTCTCTCCTTAGGACTTTGG | + |
Preference number: 3 (lower is better) Translates to: RKTEKAMYLFHV*RCRPALSLGLW Trigger: CCAAAGTCCTAAGGAGAGAGCAGGCCTGCACCTTCAGACATGGAATAAATACATCGCCTTTTCTGTTTTCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062108.10 |
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3UTR CCA 72 bp | TTAGGACTTTGGGTTCCAACATCTGTCCAGTTAGCATaGCTGTGGTTGATACTGACCAGCTGTTTCTTAGAA | + |
Preference number: 3 (lower is better) Translates to: LGLWVPTSVQLA*LWLILTSCFLE Trigger: TTCTAAGAAACAGCTGGTCAGTATCAACCACAGCCATGCTAACTGGACAGATGTTGGAACCCAAAGTCCTAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062108.10 ENSMUST00000161764.8 |
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CDS-3UTR TCA 90 bp | AGATACTGCCTGGGATGGCCAGGAGTCCCTGTCCTAGCTGCTTCCCAAGAGGACGCCCACCGAAGGGGATaGAGGGCAGACTGCCTGTGG | + |
Preference number: 4 (lower is better) Translates to: RYCLGWPGVPVLAASQEDAHRRG*RADCLW Trigger: CCACAGGCAGTCTGCCCTTCATCCCCTTCGGTGGGC...GTCCTCTTGGGAAGCAGCTAGGACAGGGACTCCTGGCCATCCCAGGCAGTATCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062108.10 ENSMUST00000161764.8 |
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CDS-3UTR TCA 90 bp | TGTTGGCCAATGGCCAATGGCCAAGAGGGAGGTAGGCTAGTGAGATGGAACCAGGCCCACCGAAGGGGATaGAGGGCAGACTGCCTGTGG | + |
Preference number: 4 (lower is better) Translates to: CWPMANGQEGGRLVRWNQAHRRG*RADCLW Trigger: CCACAGGCAGTCTGCCCTTCATCCCCTTCGGTGGGC...CTGGTTCCATCTCACTAGCCTACCTCCCTCTTGGCCATTGGCCATTGGCCAACA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062108.10 ENSMUST00000161764.8 |
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CDS-3UTR TCA 90 bp | GCAGAGCGTGAGAGGGCTGAGCCTTTTCTTTCCAAGACCAGACCTCCAGAGCCTGGATCAGGGCCGGGATaGGGAGCCATAGGTTGCGGT | + |
Preference number: 4 (lower is better) Translates to: AERERAEPFLSKTRPPEPGSGPG*GAIGCG Trigger: ACCGCAACCTATGGCTCCTCATCCCGGCCCTGATCC...AGGCTCTGGAGGTCTGGTCTTGGAAAGAAAAGGCTCAGCCCTCTCACGCTCTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062108.10 ENSMUST00000161764.8 |
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CDS-3UTR GCA 90 bp | GTGAGAGGGCTGAGCCTTTTCTTTCCAAGACCAGACCTCCAGAGCCTGGGTGAGCAGACTGCCTGTGGCTaGGTGGTACAGGGTCACCCC | + |
Preference number: 4 (lower is better) Translates to: VRGLSLFFPRPDLQSLGEQTACG*VVQGHP Trigger: GGGGTGACCCTGTACCACGCAGCCACAGGCAGTCTG...CTCACCCAGGCTCTGGAGGTCTGGTCTTGGAAAGAAAAGGCTCAGCCCTCTCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062108.10 ENSMUST00000161764.8 |
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CDS-3UTR GCA 90 bp | GTGAGAGGGCTGAGCCTTTTCTTTCCAAGACCAGACCTCCAGAGCCTGGGTGAGGCTGTGTGGGCGATGTaGTGGGCTGAGAGGCTTGGC | + |
Preference number: 4 (lower is better) Translates to: VRGLSLFFPRPDLQSLGEAVWAM*WAERLG Trigger: GCCAAGCCTCTCAGCCCAGCACATCGCCCACACAGC...CTCACCCAGGCTCTGGAGGTCTGGTCTTGGAAAGAAAAGGCTCAGCCCTCTCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062108.10 ENSMUST00000161764.8 |
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CDS-3UTR CCA 90 bp | GGCTGTGGTAGCCGCATGGTCTCTTCTGTAGATACTGCCTGGGATGGCCAGGAGGTGTGGGCGATGTGCTaGGCTGAGAGGCTTGGCTCA | + |
Preference number: 4 (lower is better) Translates to: GCGSRMVSSVDTAWDGQEVWAMC*AERLGS Trigger: TGAGCCAAGCCTCTCAGCCCAGCACATCGCCCACAC...CTCCTGGCCATCCCAGGCAGTATCTACAGAAGAGACCATGCGGCTACCACAGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062108.10 ENSMUST00000161764.8 |
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CDS-3UTR CCA 90 bp | GTGAGAGGGCTGAGCCTTTTCTTTCCAAGACCAGACCTCCAGAGCCTGGGTGAGCTGCTGGCAGCTGTGTaGGCGATGTGCTGGGCTGAG | + |
Preference number: 4 (lower is better) Translates to: VRGLSLFFPRPDLQSLGELLAAV*AMCWAE Trigger: CTCAGCCCAGCACATCGCCCACACAGCTGCCAGCAG...CTCACCCAGGCTCTGGAGGTCTGGTCTTGGAAAGAAAAGGCTCAGCCCTCTCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062108.10 ENSMUST00000161764.8 |
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CDS-3UTR CCA 90 bp | GGCTGTGGTAGCCGCATGGTCTCTTCTGTAGATACTGCCTGGGATGGCCAGGAGAGATGCAGGTGGTTCTaGGCCCTCTGCACCTGCCTC | + |
Preference number: 4 (lower is better) Translates to: GCGSRMVSSVDTAWDGQERCRWF*ALCTCL Trigger: GAGGCAGGTGCAGAGGGCCCAGAACCACCTGCATCT...CTCCTGGCCATCCCAGGCAGTATCTACAGAAGAGACCATGCGGCTACCACAGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062108.10 ENSMUST00000161764.8 |
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CDS-3UTR GCA 90 bp | GGCTGTGGTAGCCGCATGGTCTCTTCTGTAGATACTGCCTGGGATGGCCAGGAGACAGAGTTAGAGGGCTaGTGGCAGCTGTGTGGGCGA | + |
Preference number: 4 (lower is better) Translates to: GCGSRMVSSVDTAWDGQETELEG*WQLCGR Trigger: TCGCCCACACAGCTGCCAGCAGCCCTCTAACTCTGT...CTCCTGGCCATCCCAGGCAGTATCTACAGAAGAGACCATGCGGCTACCACAGCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062108.10 ENSMUST00000161764.8 |
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CDS-3UTR CCA 90 bp | GTGAGAGGGCTGAGCCTTTTCTTTCCAAGACCAGACCTCCAGAGCCTGGGTGAGTGTACACACTGGCAGTaGCCCCCTGCCCTAGCAGGT | + |
Preference number: 4 (lower is better) Translates to: VRGLSLFFPRPDLQSLGECTHWQ*PPALAG Trigger: ACCTGCTAGGGCAGGGGGCCACTGCCAGTGTGTACA...CTCACCCAGGCTCTGGAGGTCTGGTCTTGGAAAGAAAAGGCTCAGCCCTCTCAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000062108.10 ENSMUST00000161764.8 |
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CDS-3UTR CCA 90 bp | GGCTGTGGTAGCCGCATGGTCTCTTCTGTAGATACTGCCTGGGATGGCCAGGAGGGATGTTGGCCAGGATaGGCACCAGCTGGTTCTGCA | + |
Preference number: 4 (lower is better) Translates to: GCGSRMVSSVDTAWDGQEGCWPG*APAGSA Trigger: TGCAGAACCAGCTGGTGCCCATCCTGGCCAACATCC...CTCCTGGCCATCCCAGGCAGTATCTACAGAAGAGACCATGCGGCTACCACAGCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062108.10 ENSMUST00000161764.8 |
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CDS-3UTR TCA 90 bp | CCACCCACTTTCTCAAATGCAGGTGCATCTAGACCAAGCACAGAGGGGCCGTTTGGCGATGTGCTGGGCTaGGAGGCTTGGCTCAAGGAC | + |
Preference number: 4 (lower is better) Translates to: PPTFSNAGASRPSTEGPFGDVLG*EAWLKD Trigger: GTCCTTGAGCCAAGCCTCTCAGCCCAGCACATCGCC...AAACGGCCCCTCTGTGCTTGGTCTAGATGCACCTGCATTTGAGAAAGTGGGTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062108.10 ENSMUST00000161764.8 |
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CDS-3UTR TCA 90 bp | TTCTTTCCAAGACCAGACCTCCAGAGCCTGGGTGAGGAAGAACAGTCTTGGTGTGGAGGGCTGTCCGTGTaGCCTCCAGTGTCTGCTGGC | + |
Preference number: 4 (lower is better) Translates to: FFPRPDLQSLGEEEQSWCGGLSV*PPVSAG Trigger: GCCAGCAGACACTGGAGGTCACACGGACAGCCCTCC...ACACCAAGACTGTTCTTCCTCACCCAGGCTCTGGAGGTCTGGTCTTGGAAAGAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062108.10 ENSMUST00000161764.8 |
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CDS-3UTR TCA 90 bp | GTGAGAGGGCTGAGCCTTTTCTTTCCAAGACCAGACCTCCAGAGCCTGGGTGAGGTGACCAGCGACACCTaGTACGTCTGCACACACTCC | + |
Preference number: 4 (lower is better) Translates to: VRGLSLFFPRPDLQSLGEVTSDT*YVCTHS Trigger: GGAGTGTGTGCAGACGTATCAGGTGTCGCTGGTCAC...CTCACCCAGGCTCTGGAGGTCTGGTCTTGGAAAGAAAAGGCTCAGCCCTCTCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062108.10 ENSMUST00000161764.8 |
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CDS-3UTR GCA 90 bp | GTGAGAGGGCTGAGCCTTTTCTTTCCAAGACCAGACCTCCAGAGCCTGGGTGAGACAGAGTTAGAGGGCTaGTGGCAGCTGTGTGGGCGA | + |
Preference number: 4 (lower is better) Translates to: VRGLSLFFPRPDLQSLGETELEG*WQLCGR Trigger: TCGCCCACACAGCTGCCAGCAGCCCTCTAACTCTGT...CTCACCCAGGCTCTGGAGGTCTGGTCTTGGAAAGAAAAGGCTCAGCCCTCTCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062108.10 ENSMUST00000161764.8 |
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CDS-3UTR TCA 90 bp | GAGCGTGAGAGGGCTGAGCCTTTTCTTTCCAAGACCAGACCTCCAGAGCCTGGGTCGCCGATAGCTGGCTaGGTTGAAGACCTTTACAGC | + |
Preference number: 4 (lower is better) Translates to: ERERAEPFLSKTRPPEPGSPIAG*VEDLYS Trigger: GCTGTAAAGGTCTTCAACTCAGCCAGCTATCGGCGA...CCCAGGCTCTGGAGGTCTGGTCTTGGAAAGAAAAGGCTCAGCCCTCTCACGCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062108.10 ENSMUST00000161764.8 |
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CDS-3UTR TCA 90 bp | GAATCCTCAAAGCACCAGCAGTTAGCCTCAACCACCCACTTTCTCAAATGCAGGGGAGGGCTGTCCGTGTaGCCTCCAGTGTCTGCTGGC | + |
Preference number: 4 (lower is better) Translates to: ESSKHQQLASTTHFLKCRGGLSV*PPVSAG Trigger: GCCAGCAGACACTGGAGGTCACACGGACAGCCCTCC...CCTGCATTTGAGAAAGTGGGTGGTTGAGGCTAACTGCTGGTGCTTTGAGGATTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062108.10 ENSMUST00000161764.8 |
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CDS-3UTR TCA 90 bp | TTCTGTAGATACTGCCTGGGATGGCCAGGAGTCCCTGTCCTAGCTGCTTCCCAACCACAGAGTGGCCAATaGGATGCAGGTGGTTCTGGG | + |
Preference number: 4 (lower is better) Translates to: FCRYCLGWPGVPVLAASQPQSGQ*DAGGSG Trigger: CCCAGAACCACCTGCATCTCATTGGCCACTCTGTGG...TTGGGAAGCAGCTAGGACAGGGACTCCTGGCCATCCCAGGCAGTATCTACAGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062108.10 ENSMUST00000161764.8 |
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CDS-3UTR GCA 90 bp | GGCTGTGGTAGCCGCATGGTCTCTTCTGTAGATACTGCCTGGGATGGCCAGGAGTGGATGACCGTTCGCTaGAGAATGTCACTGGTCTCC | + |
Preference number: 4 (lower is better) Translates to: GCGSRMVSSVDTAWDGQEWMTVR*RMSLVS Trigger: GGAGACCAGTGACATTCTGCAGCGAACGGTCATCCA...CTCCTGGCCATCCCAGGCAGTATCTACAGAAGAGACCATGCGGCTACCACAGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062108.10 ENSMUST00000161764.8 |
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CDS-3UTR GCA 90 bp | GCAGAGCGTGAGAGGGCTGAGCCTTTTCTTTCCAAGACCAGACCTCCAGAGCCTTCCTCCTGGAACACCTaGAGCAGCCTCTTGGCTAGA | + |
Preference number: 4 (lower is better) Translates to: AERERAEPFLSKTRPPEPSSWNT*SSLLAR Trigger: TCTAGCCAAGAGGCTGCTGCAGGTGTTCCAGGAGGA...AGGCTCTGGAGGTCTGGTCTTGGAAAGAAAAGGCTCAGCCCTCTCACGCTCTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062108.10 ENSMUST00000161764.8 |
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CDS-3UTR TCA 90 bp | TTCTGTAGATACTGCCTGGGATGGCCAGGAGTCCCTGTCCTAGCTGCTTCCCAATCAAGGACACAAGGGTaGCCCTCGAAGAGGTACTCC | + |
Preference number: 4 (lower is better) Translates to: FCRYCLGWPGVPVLAASQSRTQG*PSKRYS Trigger: GGAGTACCTCTTCGAGGGTCACCCTTGTGTCCTTGA...TTGGGAAGCAGCTAGGACAGGGACTCCTGGCCATCCCAGGCAGTATCTACAGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062108.10 ENSMUST00000161764.8 |
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CDS-3UTR TCA 90 bp | GCACAGGAAACAACCAAGAATAAGCATTCTGATCCAGCACCCTGGAGAGGCAGGGCTCCTCATTGTAGCTaGGCCCTGGCCTCATCCTGG | + |
Preference number: 4 (lower is better) Translates to: AQETTKNKHSDPAPWRGRAPHCS*ALASSW Trigger: CCAGGATGAGGCCAGGGCTCAGCTACAATGAGGAGC...CCTGCCTCTCCAGGGTGCTGGATCAGAATGCTTATTCTTGGTTGTTTCCTGTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062108.10 ENSMUST00000161764.8 |
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CDS-3UTR TCA 90 bp | GATGGGGACACTCAGGAAGCAGCACAGGAAACAACCAAGAATAAGCATTCTGATTGCCGGCTGCCTCCCTaGACCTCAGGAGGTCGCCGA | + |
Preference number: 4 (lower is better) Translates to: DGDTQEAAQETTKNKHSDCRLPP*TSGGRR Trigger: TCGGCGACCTCCTGAGGTTCAGGGAGGCAGCCGGCA...ATCAGAATGCTTATTCTTGGTTGTTTCCTGTGCTGCTTCCTGAGTGTCCCCATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161764.8 |
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CDS-3UTR GCA 90 bp | GCTAGTGAGATGGAACCAGAACTTGCCCTGAATTTGGTCTCACAGTGTAGGGGTGCACCTTCTGCCGGCTaGCTCCCGTTTCCTCCACTG | + |
Preference number: 4 (lower is better) Translates to: ASEMEPELALNLVSQCRGAPSAG*LPFPPL Trigger: CAGTGGAGGAAACGGGAGGCAGCCGGCAGAAGGTGC...ACCCCTACACTGTGAGACCAAATTCAGGGCAAGTTCTGGTTCCATCTCACTAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062108.10 |
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CDS-3UTR GCA 90 bp | TTCTGTAGATACTGCCTGGGATGGCCAGGAGTCCCTGTCCTAGCTGCTTCCCAACAGACAGCTTATAGATaGTCTGCCCCTCCTCGCCCA | + |
Preference number: 4 (lower is better) Translates to: FCRYCLGWPGVPVLAASQQTAYR*SAPPRP Trigger: TGGGCGAGGAGGGGCAGAGCATCTATAAGCTGTCTG...TTGGGAAGCAGCTAGGACAGGGACTCCTGGCCATCCCAGGCAGTATCTACAGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062108.10 ENSMUST00000161764.8 |
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CDS-3UTR GCA 90 bp | GAATCCTCAAAGCACCAGCAGTTAGCCTCAACCACCCACTTTCTCAAATGCAGGGCTGTGTGGGCGATGTaGTGGGCTGAGAGGCTTGGC | + |
Preference number: 4 (lower is better) Translates to: ESSKHQQLASTTHFLKCRAVWAM*WAERLG Trigger: GCCAAGCCTCTCAGCCCAGCACATCGCCCACACAGC...CCTGCATTTGAGAAAGTGGGTGGTTGAGGCTAACTGCTGGTGCTTTGAGGATTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062108.10 ENSMUST00000161764.8 |
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CDS-3UTR GCA 90 bp | CCACCCACTTTCTCAAATGCAGGTGCATCTAGACCAAGCACAGAGGGGCCGTTTGAGTGGCCAATGAGATaGAGGTGGTTCTGGGCCCTC | + |
Preference number: 4 (lower is better) Translates to: PPTFSNAGASRPSTEGPFEWPMR*RWFWAL Trigger: GAGGGCCCAGAACCACCTGCATCTCATTGGCCACTC...AAACGGCCCCTCTGTGCTTGGTCTAGATGCACCTGCATTTGAGAAAGTGGGTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062108.10 ENSMUST00000161764.8 |
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CDS-3UTR CCA 90 bp | AAGCGTTCCTCGGAGAAAAGGTCAAGGAGAATCCTCAAAGCACCAGCAGTTAGCGGGCCTTGTACACACTaGCAGTGGCCCCCTGCCCTA | + |
Preference number: 4 (lower is better) Translates to: KRSSEKRSRRILKAPAVSGPCTH*QWPPAL Trigger: TAGGGCAGGGGGCCACTGCCAGTGTGTACAAGGCCC...GCTAACTGCTGGTGCTTTGAGGATTCTCCTTGACCTTTTCTCCGAGGAACGCTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000062108.10 ENSMUST00000161764.8 |
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CDS-3UTR CCA 90 bp | GAATCCTCAAAGCACCAGCAGTTAGCCTCAACCACCCACTTTCTCAAATGCAGGGGGCCTTGTACACACTaGCAGTGGCCCCCTGCCCTA | + |
Preference number: 4 (lower is better) Translates to: ESSKHQQLASTTHFLKCRGPCTH*QWPPAL Trigger: TAGGGCAGGGGGCCACTGCCAGTGTGTACAAGGCCC...CCTGCATTTGAGAAAGTGGGTGGTTGAGGCTAACTGCTGGTGCTTTGAGGATTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000062108.10 ENSMUST00000161764.8 |
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CDS-3UTR CCA 90 bp | TTCTTTCCAAGACCAGACCTCCAGAGCCTGGGTGAGGAAGAACAGTCTTGGTGTGTGTGGGCGATGTGCTaGGCTGAGAGGCTTGGCTCA | + |
Preference number: 4 (lower is better) Translates to: FFPRPDLQSLGEEEQSWCVWAMC*AERLGS Trigger: TGAGCCAAGCCTCTCAGCCCAGCACATCGCCCACAC...ACACCAAGACTGTTCTTCCTCACCCAGGCTCTGGAGGTCTGGTCTTGGAAAGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062108.10 ENSMUST00000161764.8 |
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CDS-3UTR CCA 90 bp | GGCTGTGGTAGCCGCATGGTCTCTTCTGTAGATACTGCCTGGGATGGCCAGGAGTGGTTCTTAGCTCTGTaGCCTCCTTTCGTTCCTGGA | + |
Preference number: 4 (lower is better) Translates to: GCGSRMVSSVDTAWDGQEWFLAL*PPFVPG Trigger: TCCAGGAACGAAAGGAGGCCACAGAGCTAAGAACCA...CTCCTGGCCATCCCAGGCAGTATCTACAGAAGAGACCATGCGGCTACCACAGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062108.10 ENSMUST00000161764.8 |
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CDS-3UTR TCA 90 bp | GGCTGTGGTAGCCGCATGGTCTCTTCTGTAGATACTGCCTGGGATGGCCAGGAGGATAGCTGGCTGAGTTaGAGACCTTTACAGCAACCA | + |
Preference number: 4 (lower is better) Translates to: GCGSRMVSSVDTAWDGQEDSWLS*RPLQQP Trigger: TGGTTGCTGTAAAGGTCTTCAACTCAGCCAGCTATC...CTCCTGGCCATCCCAGGCAGTATCTACAGAAGAGACCATGCGGCTACCACAGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062108.10 ENSMUST00000161764.8 |
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CDS-3UTR TCA 90 bp | TTCTGTAGATACTGCCTGGGATGGCCAGGAGTCCCTGTCCTAGCTGCTTCCCAATCGCCGATAGCTGGCTaGGTTGAAGACCTTTACAGC | + |
Preference number: 4 (lower is better) Translates to: FCRYCLGWPGVPVLAASQSPIAG*VEDLYS Trigger: GCTGTAAAGGTCTTCAACTCAGCCAGCTATCGGCGA...TTGGGAAGCAGCTAGGACAGGGACTCCTGGCCATCCCAGGCAGTATCTACAGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062108.10 ENSMUST00000161764.8 |
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CDS-3UTR TCA 90 bp | GACCAGACCTCCAGAGCCTGGGTGAGGAAGAACAGTCTTGGTGTCTTGATAAGGTCAAGGACACAAGGGTaGCCCTCGAAGAGGTACTCC | + |
Preference number: 4 (lower is better) Translates to: DQTSRAWVRKNSLGVLIRSRTQG*PSKRYS Trigger: GGAGTACCTCTTCGAGGGTCACCCTTGTGTCCTTGA...CCTTATCAAGACACCAAGACTGTTCTTCCTCACCCAGGCTCTGGAGGTCTGGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062108.10 ENSMUST00000161764.8 |
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CDS-3UTR TCA 90 bp | CTCTCCTTAGGACTTTGGGTTCCAACATCTGTCCAGTTAGCATGGCTGTGGTTGTGCTGGCACGTGTCCTaGAGCACCTCCAGGACCCAA | + |
Preference number: 4 (lower is better) Translates to: LSLGLWVPTSVQLAWLWLCWHVS*STSRTQ Trigger: TTGGGTCCTGGAGGTGCTTCAGGACACGTGCCAGCA...CAACCACAGCCATGCTAACTGGACAGATGTTGGAACCCAAAGTCCTAAGGAGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062108.10 ENSMUST00000161764.8 |
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CDS-3UTR TCA 90 bp | AAGCGTTCCTCGGAGAAAAGGTCAAGGAGAATCCTCAAAGCACCAGCAGTTAGCTGCTGGCACGTGTCCTaGAGCACCTCCAGGACCCAA | + |
Preference number: 4 (lower is better) Translates to: KRSSEKRSRRILKAPAVSCWHVS*STSRTQ Trigger: TTGGGTCCTGGAGGTGCTTCAGGACACGTGCCAGCA...GCTAACTGCTGGTGCTTTGAGGATTCTCCTTGACCTTTTCTCCGAGGAACGCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062108.10 ENSMUST00000161764.8 |
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CDS-3UTR TCA 90 bp | CTCTCCTTAGGACTTTGGGTTCCAACATCTGTCCAGTTAGCATGGCTGTGGTTGGCTCCTCATTGTAGCTaGGCCCTGGCCTCATCCTGG | + |
Preference number: 4 (lower is better) Translates to: LSLGLWVPTSVQLAWLWLAPHCS*ALASSW Trigger: CCAGGATGAGGCCAGGGCTCAGCTACAATGAGGAGC...CAACCACAGCCATGCTAACTGGACAGATGTTGGAACCCAAAGTCCTAAGGAGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062108.10 ENSMUST00000161764.8 |
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CDS-3UTR TCA 90 bp | CGGAGAAAAGGTCAAGGAGAATCCTCAAAGCACCAGCAGTTAGCCTCAACCACCGTGACCAGCGACACCTaGTACGTCTGCACACACTCC | + |
Preference number: 4 (lower is better) Translates to: RRKGQGESSKHQQLASTTVTSDT*YVCTHS Trigger: GGAGTGTGTGCAGACGTATCAGGTGTCGCTGGTCAC...GGTGGTTGAGGCTAACTGCTGGTGCTTTGAGGATTCTCCTTGACCTTTTCTCCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062108.10 ENSMUST00000161764.8 |
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CDS-3UTR TCA 90 bp | CGGAGAAAAGGTCAAGGAGAATCCTCAAAGCACCAGCAGTTAGCCTCAACCACCCCACAGAGTGGCCAATaGGATGCAGGTGGTTCTGGG | + |
Preference number: 4 (lower is better) Translates to: RRKGQGESSKHQQLASTTPQSGQ*DAGGSG Trigger: CCCAGAACCACCTGCATCTCATTGGCCACTCTGTGG...GGTGGTTGAGGCTAACTGCTGGTGCTTTGAGGATTCTCCTTGACCTTTTCTCCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000062108.10 ENSMUST00000161764.8 |
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CDS-3UTR GCA 90 bp | GACCAGACCTCCAGAGCCTGGGTGAGGAAGAACAGTCTTGGTGTCTTGATAAGGCAGACAGCTTATAGATaGTCTGCCCCTCCTCGCCCA | + |
Preference number: 4 (lower is better) Translates to: DQTSRAWVRKNSLGVLIRQTAYR*SAPPRP Trigger: TGGGCGAGGAGGGGCAGAGCATCTATAAGCTGTCTG...CCTTATCAAGACACCAAGACTGTTCTTCCTCACCCAGGCTCTGGAGGTCTGGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062108.10 ENSMUST00000161764.8 |
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CDS-3UTR GCA 90 bp | GTGAGAGGGCTGAGCCTTTTCTTTCCAAGACCAGACCTCCAGAGCCTGGGTGAGACACCAAATGCCTTTTaGTGGGGTTTGCGCAGCACT | + |
Preference number: 4 (lower is better) Translates to: VRGLSLFFPRPDLQSLGETPNAF*WGLRST Trigger: AGTGCTGCGCAAACCCCAGCAAAAGGCATTTGGTGT...CTCACCCAGGCTCTGGAGGTCTGGTCTTGGAAAGAAAAGGCTCAGCCCTCTCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000062108.10 ENSMUST00000161764.8 |
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CDS-3UTR GCA 90 bp | GTGAGAGGGCTGAGCCTTTTCTTTCCAAGACCAGACCTCCAGAGCCTGGGTGAGCACAGTCACACCAAATaGCTTTTGCTGGGGTTTGCG | + |
Preference number: 4 (lower is better) Translates to: VRGLSLFFPRPDLQSLGEHSHTK*LLLGFA Trigger: CGCAAACCCCAGCAAAAGGCATTTGGTGTGACTGTG...CTCACCCAGGCTCTGGAGGTCTGGTCTTGGAAAGAAAAGGCTCAGCCCTCTCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000062108.10 ENSMUST00000161764.8 |
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CDS-3UTR GCA 90 bp | AAAGCACCAGCAGTTAGCCTCAACCACCCACTTTCTCAAATGCAGGTGCATCTACAGACTGCCTGTGGCTaGGTGGTACAGGGTCACCCC | + |
Preference number: 4 (lower is better) Translates to: KAPAVSLNHPLSQMQVHLQTACG*VVQGHP Trigger: GGGGTGACCCTGTACCACGCAGCCACAGGCAGTCTG...TAGATGCACCTGCATTTGAGAAAGTGGGTGGTTGAGGCTAACTGCTGGTGCTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062108.10 ENSMUST00000161764.8 |
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CDS-3UTR GCA 90 bp | TGTTGGCCAATGGCCAATGGCCAAGAGGGAGGTAGGCTAGTGAGATGGAACCAGTGGATGACCGTTCGCTaGAGAATGTCACTGGTCTCC | + |
Preference number: 4 (lower is better) Translates to: CWPMANGQEGGRLVRWNQWMTVR*RMSLVS Trigger: GGAGACCAGTGACATTCTGCAGCGAACGGTCATCCA...CTGGTTCCATCTCACTAGCCTACCTCCCTCTTGGCCATTGGCCATTGGCCAACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062108.10 ENSMUST00000161764.8 |
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CDS-3UTR GCA 90 bp | GCACAGGAAACAACCAAGAATAAGCATTCTGATCCAGCACCCTGGAGAGGCAGGGAGTGGCCAATGAGATaGAGGTGGTTCTGGGCCCTC | + |
Preference number: 4 (lower is better) Translates to: AQETTKNKHSDPAPWRGREWPMR*RWFWAL Trigger: GAGGGCCCAGAACCACCTGCATCTCATTGGCCACTC...CCTGCCTCTCCAGGGTGCTGGATCAGAATGCTTATTCTTGGTTGTTTCCTGTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062108.10 ENSMUST00000161764.8 |
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CDS-3UTR CCA 90 bp | AAGCGTTCCTCGGAGAAAAGGTCAAGGAGAATCCTCAAAGCACCAGCAGTTAGCTGTACACACTGGCAGTaGCCCCCTGCCCTAGCAGGT | + |
Preference number: 4 (lower is better) Translates to: KRSSEKRSRRILKAPAVSCTHWQ*PPALAG Trigger: ACCTGCTAGGGCAGGGGGCCACTGCCAGTGTGTACA...GCTAACTGCTGGTGCTTTGAGGATTCTCCTTGACCTTTTCTCCGAGGAACGCTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000062108.10 ENSMUST00000161764.8 |
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CDS-3UTR CCA 90 bp | AAAGCACCAGCAGTTAGCCTCAACCACCCACTTTCTCAAATGCAGGTGCATCTACTGCTGGCAGCTGTGTaGGCGATGTGCTGGGCTGAG | + |
Preference number: 4 (lower is better) Translates to: KAPAVSLNHPLSQMQVHLLLAAV*AMCWAE Trigger: CTCAGCCCAGCACATCGCCCACACAGCTGCCAGCAG...TAGATGCACCTGCATTTGAGAAAGTGGGTGGTTGAGGCTAACTGCTGGTGCTTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062108.10 ENSMUST00000161764.8 |
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CDS-3UTR TCA 90 bp | CGGAGAAAAGGTCAAGGAGAATCCTCAAAGCACCAGCAGTTAGCCTCAACCACCTGGAGCAGTACTCCATaGTTAGCACCTTCTGCCGGC | + |
Preference number: 4 (lower is better) Translates to: RRKGQGESSKHQQLASTTWSSTP*LAPSAG Trigger: GCCGGCAGAAGGTGCTAATCATGGAGTACTGCTCCA...GGTGGTTGAGGCTAACTGCTGGTGCTTTGAGGATTCTCCTTGACCTTTTCTCCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062108.10 ENSMUST00000161764.8 |
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CDS-3UTR TCA 90 bp | CTCAACCACCCACTTTCTCAAATGCAGGTGCATCTAGACCAAGCACAGAGGGGCGTCTCCGCGAAGAACTaGTCAAAGCCCCAGCACTTA | + |
Preference number: 4 (lower is better) Translates to: LNHPLSQMQVHLDQAQRGVSAKN*SKPQHL Trigger: TAAGTGCTGGGGCTTTGATCAGTTCTTCGCGGAGAC...GCCCCTCTGTGCTTGGTCTAGATGCACCTGCATTTGAGAAAGTGGGTGGTTGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000062108.10 ENSMUST00000161764.8 |
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CDS-3UTR GCA 90 bp | GAGCGTGAGAGGGCTGAGCCTTTTCTTTCCAAGACCAGACCTCCAGAGCCTGGGTCATACATGTCAGGGTaGAGGTATTCCTCTGTACCA | + |
Preference number: 4 (lower is better) Translates to: ERERAEPFLSKTRPPEPGSYMSG*RYSSVP Trigger: TGGTACAGAGGAATACCTGCACCCTGACATGTATGA...CCCAGGCTCTGGAGGTCTGGTCTTGGAAAGAAAAGGCTCAGCCCTCTCACGCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062108.10 ENSMUST00000161764.8 |
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CDS-3UTR CCA 90 bp | GAATCCTCAAAGCACCAGCAGTTAGCCTCAACCACCCACTTTCTCAAATGCAGGAGGATGGGCACCAGCTaGTTCTGCAGTCCCATGGAC | + |
Preference number: 4 (lower is better) Translates to: ESSKHQQLASTTHFLKCRRMGTS*FCSPMD Trigger: GTCCATGGGACTGCAGAACCAGCTGGTGCCCATCCT...CCTGCATTTGAGAAAGTGGGTGGTTGAGGCTAACTGCTGGTGCTTTGAGGATTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062108.10 ENSMUST00000161764.8 |
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CDS-3UTR CCA 90 bp | CGGAGAAAAGGTCAAGGAGAATCCTCAAAGCACCAGCAGTTAGCCTCAACCACCGGTACTCCTGGTGTTTaGGGGTCACGTTGGTCTGCT | + |
Preference number: 4 (lower is better) Translates to: RRKGQGESSKHQQLASTTGTPGV*GSRWSA Trigger: AGCAGACCAACGTGACCCCCAAACACCAGGAGTACC...GGTGGTTGAGGCTAACTGCTGGTGCTTTGAGGATTCTCCTTGACCTTTTCTCCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000062108.10 ENSMUST00000161764.8 |
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CDS-3UTR CCA 90 bp | CCACCCACTTTCTCAAATGCAGGTGCATCTAGACCAAGCACAGAGGGGCCGTTTCTTAGGGACGAACTTTaGGACATCCAGAGCAGGGTC | + |
Preference number: 4 (lower is better) Translates to: PPTFSNAGASRPSTEGPFLRDEL*DIQSRV Trigger: GACCCTGCTCTGGATGTCCCAAAGTTCGTCCCTAAG...AAACGGCCCCTCTGTGCTTGGTCTAGATGCACCTGCATTTGAGAAAGTGGGTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062108.10 ENSMUST00000161764.8 |
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CDS-3UTR CCA 90 bp | CTCTCCTTAGGACTTTGGGTTCCAACATCTGTCCAGTTAGCATGGCTGTGGTTGCAGGTGGCCACAGAGTaGCCAATGAGATGCAGGTGG | + |
Preference number: 4 (lower is better) Translates to: LSLGLWVPTSVQLAWLWLQVATE*PMRCRW Trigger: CCACCTGCATCTCATTGGCCACTCTGTGGCCACCTG...CAACCACAGCCATGCTAACTGGACAGATGTTGGAACCCAAAGTCCTAAGGAGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062108.10 ENSMUST00000161764.8 |
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CDS-3UTR TCA 90 bp | GAATCCTCAAAGCACCAGCAGTTAGCCTCAACCACCCACTTTCTCAAATGCAGGCCATTTTCCTGCTTCTaGGTCCCTGAAATGGCCCCG | + |
Preference number: 4 (lower is better) Translates to: ESSKHQQLASTTHFLKCRPFSCF*VPEMAP Trigger: CGGGGCCATTTCAGGGACTCAGAAGCAGGAAAATGG...CCTGCATTTGAGAAAGTGGGTGGTTGAGGCTAACTGCTGGTGCTTTGAGGATTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000062108.10 ENSMUST00000161764.8 |
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CDS-3UTR TCA 90 bp | TTCTTTCCAAGACCAGACCTCCAGAGCCTGGGTGAGGAAGAACAGTCTTGGTGTGTCTCCGCGAAGAACTaGTCAAAGCCCCAGCACTTA | + |
Preference number: 4 (lower is better) Translates to: FFPRPDLQSLGEEEQSWCVSAKN*SKPQHL Trigger: TAAGTGCTGGGGCTTTGATCAGTTCTTCGCGGAGAC...ACACCAAGACTGTTCTTCCTCACCCAGGCTCTGGAGGTCTGGTCTTGGAAAGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062108.10 ENSMUST00000161764.8 |
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CDS-3UTR GCA 90 bp | GAATCCTCAAAGCACCAGCAGTTAGCCTCAACCACCCACTTTCTCAAATGCAGGTGTCCCGATGGACAATaGCATTCTCCCGCAGGTGGT | + |
Preference number: 4 (lower is better) Translates to: ESSKHQQLASTTHFLKCRCPDGQ*HSPAGG Trigger: ACCACCTGCGGGAGAATGGCATTGTCCATCGGGACA...CCTGCATTTGAGAAAGTGGGTGGTTGAGGCTAACTGCTGGTGCTTTGAGGATTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062108.10 ENSMUST00000161764.8 |
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CDS-3UTR GCA 90 bp | GCAGTTAGCCTCAACCACCCACTTTCTCAAATGCAGGTGCATCTAGACCAAGCATGTCCCGATGGACAATaGCATTCTCCCGCAGGTGGT | + |
Preference number: 4 (lower is better) Translates to: AVSLNHPLSQMQVHLDQACPDGQ*HSPAGG Trigger: ACCACCTGCGGGAGAATGGCATTGTCCATCGGGACA...TGCTTGGTCTAGATGCACCTGCATTTGAGAAAGTGGGTGGTTGAGGCTAACTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062108.10 ENSMUST00000161764.8 |
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CDS-3UTR GCA 90 bp | GACCAGACCTCCAGAGCCTGGGTGAGGAAGAACAGTCTTGGTGTCTTGATAAGGACACCAAATGCCTTTTaGTGGGGTTTGCGCAGCACT | + |
Preference number: 4 (lower is better) Translates to: DQTSRAWVRKNSLGVLIRTPNAF*WGLRST Trigger: AGTGCTGCGCAAACCCCAGCAAAAGGCATTTGGTGT...CCTTATCAAGACACCAAGACTGTTCTTCCTCACCCAGGCTCTGGAGGTCTGGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000062108.10 ENSMUST00000161764.8 |
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CDS-3UTR GCA 90 bp | CCACCCACTTTCTCAAATGCAGGTGCATCTAGACCAAGCACAGAGGGGCCGTTTCACAGTCACACCAAATaGCTTTTGCTGGGGTTTGCG | + |
Preference number: 4 (lower is better) Translates to: PPTFSNAGASRPSTEGPFHSHTK*LLLGFA Trigger: CGCAAACCCCAGCAAAAGGCATTTGGTGTGACTGTG...AAACGGCCCCTCTGTGCTTGGTCTAGATGCACCTGCATTTGAGAAAGTGGGTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000062108.10 ENSMUST00000161764.8 |
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CDS-3UTR GCA 90 bp | GAATCCTCAAAGCACCAGCAGTTAGCCTCAACCACCCACTTTCTCAAATGCAGGTCCTCCTGGAACACCTaGAGCAGCCTCTTGGCTAGA | + |
Preference number: 4 (lower is better) Translates to: ESSKHQQLASTTHFLKCRSSWNT*SSLLAR Trigger: TCTAGCCAAGAGGCTGCTGCAGGTGTTCCAGGAGGA...CCTGCATTTGAGAAAGTGGGTGGTTGAGGCTAACTGCTGGTGCTTTGAGGATTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062108.10 ENSMUST00000161764.8 |
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CDS-3UTR CCA 90 bp | AAAGCACCAGCAGTTAGCCTCAACCACCCACTTTCTCAAATGCAGGTGCATCTAAGGATGGGCACCAGCTaGTTCTGCAGTCCCATGGAC | + |
Preference number: 4 (lower is better) Translates to: KAPAVSLNHPLSQMQVHLRMGTS*FCSPMD Trigger: GTCCATGGGACTGCAGAACCAGCTGGTGCCCATCCT...TAGATGCACCTGCATTTGAGAAAGTGGGTGGTTGAGGCTAACTGCTGGTGCTTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062108.10 ENSMUST00000161764.8 |
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CDS-3UTR CCA 90 bp | GAAGCAGCACAGGAAACAACCAAGAATAAGCATTCTGATCCAGCACCCTGGAGAGGATGTTGGCCAGGATaGGCACCAGCTGGTTCTGCA | + |
Preference number: 4 (lower is better) Translates to: EAAQETTKNKHSDPAPWRGCWPG*APAGSA Trigger: TGCAGAACCAGCTGGTGCCCATCCTGGCCAACATCC...TCTCCAGGGTGCTGGATCAGAATGCTTATTCTTGGTTGTTTCCTGTGCTGCTTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062108.10 ENSMUST00000161764.8 |
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CDS-3UTR CCA 90 bp | CTCTCCTTAGGACTTTGGGTTCCAACATCTGTCCAGTTAGCATGGCTGTGGTTGGGTACTCCTGGTGTTTaGGGGTCACGTTGGTCTGCT | + |
Preference number: 4 (lower is better) Translates to: LSLGLWVPTSVQLAWLWLGTPGV*GSRWSA Trigger: AGCAGACCAACGTGACCCCCAAACACCAGGAGTACC...CAACCACAGCCATGCTAACTGGACAGATGTTGGAACCCAAAGTCCTAAGGAGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062108.10 ENSMUST00000161764.8 |
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CDS-3UTR CCA 90 bp | CGGAGAAAAGGTCAAGGAGAATCCTCAAAGCACCAGCAGTTAGCCTCAACCACCTCGAAGAGGTACTCCTaGTGTTTGGGGGTCACGTTG | + |
Preference number: 4 (lower is better) Translates to: RRKGQGESSKHQQLASTTSKRYS*CLGVTL Trigger: CAACGTGACCCCCAAACACCAGGAGTACCTCTTCGA...GGTGGTTGAGGCTAACTGCTGGTGCTTTGAGGATTCTCCTTGACCTTTTCTCCG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000062108.10 ENSMUST00000161764.8 |
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CDS-3UTR CCA 90 bp | TGTTGGCCAATGGCCAATGGCCAAGAGGGAGGTAGGCTAGTGAGATGGAACCAGATTGTAGCTGAGCCCTaGCCTCATCCTGGATTTCTT | + |
Preference number: 4 (lower is better) Translates to: CWPMANGQEGGRLVRWNQIVAEP*PHPGFL Trigger: AAGAAATCCAGGATGAGGCCAGGGCTCAGCTACAAT...CTGGTTCCATCTCACTAGCCTACCTCCCTCTTGGCCATTGGCCATTGGCCAACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062108.10 ENSMUST00000161764.8 |
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CDS-3UTR CCA 90 bp | GATGGGGACACTCAGGAAGCAGCACAGGAAACAACCAAGAATAAGCATTCTGATAGATGCAGGTGGTTCTaGGCCCTCTGCACCTGCCTC | + |
Preference number: 4 (lower is better) Translates to: DGDTQEAAQETTKNKHSDRCRWF*ALCTCL Trigger: GAGGCAGGTGCAGAGGGCCCAGAACCACCTGCATCT...ATCAGAATGCTTATTCTTGGTTGTTTCCTGTGCTGCTTCCTGAGTGTCCCCATC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062108.10 ENSMUST00000161764.8 |
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CDS-3UTR TCA 90 bp | AAAGCACCAGCAGTTAGCCTCAACCACCCACTTTCTCAAATGCAGGTGCATCTATTCACGATGTTCTGGTaGTTCAGCCTCCGCAGGACC | + |
Preference number: 4 (lower is better) Translates to: KAPAVSLNHPLSQMQVHLFTMFW*FSLRRT Trigger: GGTCCTGCGGAGGCTGAATCACCAGAACATCGTGAA...TAGATGCACCTGCATTTGAGAAAGTGGGTGGTTGAGGCTAACTGCTGGTGCTTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062108.10 |
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CDS-3UTR TCA 90 bp | AAAGCACCAGCAGTTAGCCTCAACCACCCACTTTCTCAAATGCAGGTGCATCTATGGAGCAGTACTCCATaGTTAGCACCTTCTGCCGGC | + |
Preference number: 4 (lower is better) Translates to: KAPAVSLNHPLSQMQVHLWSSTP*LAPSAG Trigger: GCCGGCAGAAGGTGCTAATCATGGAGTACTGCTCCA...TAGATGCACCTGCATTTGAGAAAGTGGGTGGTTGAGGCTAACTGCTGGTGCTTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062108.10 ENSMUST00000161764.8 |
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CDS-3UTR TCA 90 bp | AAAGCACCAGCAGTTAGCCTCAACCACCCACTTTCTCAAATGCAGGTGCATCTACCATTTTCCTGCTTCTaGGTCCCTGAAATGGCCCCG | + |
Preference number: 4 (lower is better) Translates to: KAPAVSLNHPLSQMQVHLPFSCF*VPEMAP Trigger: CGGGGCCATTTCAGGGACTCAGAAGCAGGAAAATGG...TAGATGCACCTGCATTTGAGAAAGTGGGTGGTTGAGGCTAACTGCTGGTGCTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000062108.10 ENSMUST00000161764.8 |
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CDS-3UTR GCA 90 bp | GAAGCAGCACAGGAAACAACCAAGAATAAGCATTCTGATCCAGCACCCTGGAGAGGCACCAGCTGGTTCTaGAGTCCCATGGACAGTCTA | + |
Preference number: 4 (lower is better) Translates to: EAAQETTKNKHSDPAPWRGTSWF*SPMDSL Trigger: TAGACTGTCCATGGGACTGCAGAACCAGCTGGTGCC...TCTCCAGGGTGCTGGATCAGAATGCTTATTCTTGGTTGTTTCCTGTGCTGCTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062108.10 ENSMUST00000161764.8 |
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CDS-3UTR GCA 90 bp | AAAGCACCAGCAGTTAGCCTCAACCACCCACTTTCTCAAATGCAGGTGCATCTAGGCACCAGCTGGTTCTaGAGTCCCATGGACAGTCTA | + |
Preference number: 4 (lower is better) Translates to: KAPAVSLNHPLSQMQVHLGTSWF*SPMDSL Trigger: TAGACTGTCCATGGGACTGCAGAACCAGCTGGTGCC...TAGATGCACCTGCATTTGAGAAAGTGGGTGGTTGAGGCTAACTGCTGGTGCTTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062108.10 ENSMUST00000161764.8 |
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CDS-3UTR GCA 90 bp | CCACCCACTTTCTCAAATGCAGGTGCATCTAGACCAAGCACAGAGGGGCCGTTTATCTCTGAGAGAGTCTaGAGCCTGGTTCTTAGCTCT | + |
Preference number: 4 (lower is better) Translates to: PPTFSNAGASRPSTEGPFISERV*SLVLSS Trigger: AGAGCTAAGAACCAGGCTGCAGACTCTCTCAGAGAT...AAACGGCCCCTCTGTGCTTGGTCTAGATGCACCTGCATTTGAGAAAGTGGGTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062108.10 ENSMUST00000161764.8 |
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CDS-3UTR CCA 90 bp | GATGGGGACACTCAGGAAGCAGCACAGGAAACAACCAAGAATAAGCATTCTGATCCATTCTCCCGCAGGTaGTTCATGCCAGCCACCACA | + |
Preference number: 4 (lower is better) Translates to: DGDTQEAAQETTKNKHSDPFSRR*FMPATT Trigger: TGTGGTGGCTGGCATGAACCACCTGCGGGAGAATGG...ATCAGAATGCTTATTCTTGGTTGTTTCCTGTGCTGCTTCCTGAGTGTCCCCATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062108.10 ENSMUST00000161764.8 |
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CDS-3UTR CCA 90 bp | AAGCGTTCCTCGGAGAAAAGGTCAAGGAGAATCCTCAAAGCACCAGCAGTTAGCTCGAAGAGGTACTCCTaGTGTTTGGGGGTCACGTTG | + |
Preference number: 4 (lower is better) Translates to: KRSSEKRSRRILKAPAVSSKRYS*CLGVTL Trigger: CAACGTGACCCCCAAACACCAGGAGTACCTCTTCGA...GCTAACTGCTGGTGCTTTGAGGATTCTCCTTGACCTTTTCTCCGAGGAACGCTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000062108.10 ENSMUST00000161764.8 |
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CDS-3UTR CCA 90 bp | GAATCCTCAAAGCACCAGCAGTTAGCCTCAACCACCCACTTTCTCAAATGCAGGCTTAGGGACGAACTTTaGGACATCCAGAGCAGGGTC | + |
Preference number: 4 (lower is better) Translates to: ESSKHQQLASTTHFLKCRLRDEL*DIQSRV Trigger: GACCCTGCTCTGGATGTCCCAAAGTTCGTCCCTAAG...CCTGCATTTGAGAAAGTGGGTGGTTGAGGCTAACTGCTGGTGCTTTGAGGATTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062108.10 ENSMUST00000161764.8 |
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CDS-3UTR CCA 90 bp | GATGGGGACACTCAGGAAGCAGCACAGGAAACAACCAAGAATAAGCATTCTGATCAGGTGGCCACAGAGTaGCCAATGAGATGCAGGTGG | + |
Preference number: 4 (lower is better) Translates to: DGDTQEAAQETTKNKHSDQVATE*PMRCRW Trigger: CCACCTGCATCTCATTGGCCACTCTGTGGCCACCTG...ATCAGAATGCTTATTCTTGGTTGTTTCCTGTGCTGCTTCCTGAGTGTCCCCATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062108.10 ENSMUST00000161764.8 |
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CDS-3UTR TCA 90 bp | TTCTTTCCAAGACCAGACCTCCAGAGCCTGGGTGAGGAAGAACAGTCTTGGTGTGATAGCTGGCTGAGTTaGAGACCTTTACAGCAACCA | + |
Preference number: 4 (lower is better) Translates to: FFPRPDLQSLGEEEQSWCDSWLS*RPLQQP Trigger: TGGTTGCTGTAAAGGTCTTCAACTCAGCCAGCTATC...ACACCAAGACTGTTCTTCCTCACCCAGGCTCTGGAGGTCTGGTCTTGGAAAGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062108.10 ENSMUST00000161764.8 |
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CDS-3UTR TCA 90 bp | AAGCGTTCCTCGGAGAAAAGGTCAAGGAGAATCCTCAAAGCACCAGCAGTTAGCTTTAGACAGGATCTCTaGGAGAGTCTGCAGCCTGGT | + |
Preference number: 4 (lower is better) Translates to: KRSSEKRSRRILKAPAVSFRQDL*ESLQPG Trigger: ACCAGGCTGCAGACTCTCTCAGAGATCCTGTCTAAA...GCTAACTGCTGGTGCTTTGAGGATTCTCCTTGACCTTTTCTCCGAGGAACGCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062108.10 ENSMUST00000161764.8 |
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CDS-3UTR TCA 90 bp | GAATCCTCAAAGCACCAGCAGTTAGCCTCAACCACCCACTTTCTCAAATGCAGGTTTAGACAGGATCTCTaGGAGAGTCTGCAGCCTGGT | + |
Preference number: 4 (lower is better) Translates to: ESSKHQQLASTTHFLKCRFRQDL*ESLQPG Trigger: ACCAGGCTGCAGACTCTCTCAGAGATCCTGTCTAAA...CCTGCATTTGAGAAAGTGGGTGGTTGAGGCTAACTGCTGGTGCTTTGAGGATTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062108.10 ENSMUST00000161764.8 |
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CDS-3UTR CCA 90 bp | GCTAGTGAGATGGAACCAGAACTTGCCCTGAATTTGGTCTCACAGTGTAGGGGTTGGTTCTTAGCTCTGTaGCCTCCTTTCGTTCCTGGA | + |
Preference number: 4 (lower is better) Translates to: ASEMEPELALNLVSQCRGWFLAL*PPFVPG Trigger: TCCAGGAACGAAAGGAGGCCACAGAGCTAAGAACCA...ACCCCTACACTGTGAGACCAAATTCAGGGCAAGTTCTGGTTCCATCTCACTAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062108.10 ENSMUST00000161764.8 |
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CDS-3UTR CCA 90 bp | GCAGTTAGCCTCAACCACCCACTTTCTCAAATGCAGGTGCATCTAGACCAAGCACAGCTCAGGCTCCTTTaGGTTTCTGTGACATTGTGG | + |
Preference number: 4 (lower is better) Translates to: AVSLNHPLSQMQVHLDQAQLRLL*VSVTLW Trigger: CCACAATGTCACAGAAACCCAAAGGAGCCTGAGCTG...TGCTTGGTCTAGATGCACCTGCATTTGAGAAAGTGGGTGGTTGAGGCTAACTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062108.10 ENSMUST00000161764.8 |
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CDS-3UTR TCA 90 bp | GCACAGGAAACAACCAAGAATAAGCATTCTGATCCAGCACCCTGGAGAGGCAGGCTGTCCAGAAGGAGCTaGTCAAAGATCTTGTTCAGA | + |
Preference number: 4 (lower is better) Translates to: AQETTKNKHSDPAPWRGRLSRRS*SKILFR Trigger: TCTGAACAAGATCTTTGATCAGCTCCTTCTGGACAG...CCTGCCTCTCCAGGGTGCTGGATCAGAATGCTTATTCTTGGTTGTTTCCTGTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062108.10 ENSMUST00000161764.8 |
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CDS-3UTR GCA 90 bp | GCACAGGAAACAACCAAGAATAAGCATTCTGATCCAGCACCCTGGAGAGGCAGGTCATACATGTCAGGGTaGAGGTATTCCTCTGTACCA | + |
Preference number: 4 (lower is better) Translates to: AQETTKNKHSDPAPWRGRSYMSG*RYSSVP Trigger: TGGTACAGAGGAATACCTGCACCCTGACATGTATGA...CCTGCCTCTCCAGGGTGCTGGATCAGAATGCTTATTCTTGGTTGTTTCCTGTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062108.10 ENSMUST00000161764.8 |
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CDS-3UTR GCA 90 bp | GCTAGTGAGATGGAACCAGAACTTGCCCTGAATTTGGTCTCACAGTGTAGGGGTATCTCTGAGAGAGTCTaGAGCCTGGTTCTTAGCTCT | + |
Preference number: 4 (lower is better) Translates to: ASEMEPELALNLVSQCRGISERV*SLVLSS Trigger: AGAGCTAAGAACCAGGCTGCAGACTCTCTCAGAGAT...ACCCCTACACTGTGAGACCAAATTCAGGGCAAGTTCTGGTTCCATCTCACTAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062108.10 ENSMUST00000161764.8 |
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CDS-3UTR GCA 90 bp | CTCTCCTTAGGACTTTGGGTTCCAACATCTGTCCAGTTAGCATGGCTGTGGTTGTCATTACAAAGCTCCTaGATGTGGAAGACCAGGTCC | + |
Preference number: 4 (lower is better) Translates to: LSLGLWVPTSVQLAWLWLSLQSS*MWKTRS Trigger: GGACCTGGTCTTCCACATGCAGGAGCTTTGTAATGA...CAACCACAGCCATGCTAACTGGACAGATGTTGGAACCCAAAGTCCTAAGGAGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062108.10 ENSMUST00000161764.8 |
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CDS-3UTR CCA 90 bp | AAAGCACCAGCAGTTAGCCTCAACCACCCACTTTCTCAAATGCAGGTGCATCTACAGCTCAGGCTCCTTTaGGTTTCTGTGACATTGTGG | + |
Preference number: 4 (lower is better) Translates to: KAPAVSLNHPLSQMQVHLQLRLL*VSVTLW Trigger: CCACAATGTCACAGAAACCCAAAGGAGCCTGAGCTG...TAGATGCACCTGCATTTGAGAAAGTGGGTGGTTGAGGCTAACTGCTGGTGCTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062108.10 ENSMUST00000161764.8 |
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CDS-3UTR TCA 90 bp | TGTTGGCCAATGGCCAATGGCCAAGAGGGAGGTAGGCTAGTGAGATGGAACCAGTTGTCCAAACAACACTaGATCTTCTGGATACTTTTG | + |
Preference number: 4 (lower is better) Translates to: CWPMANGQEGGRLVRWNQLSKQH*IFWILL Trigger: CAAAAGTATCCAGAAGATTCAGTGTTGTTTGGACAA...CTGGTTCCATCTCACTAGCCTACCTCCCTCTTGGCCATTGGCCATTGGCCAACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062108.10 ENSMUST00000161764.8 |
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CDS-3UTR CCA 90 bp | GAAGCAGCACAGGAAACAACCAAGAATAAGCATTCTGATCCAGCACCCTGGAGAATTGTAGCTGAGCCCTaGCCTCATCCTGGATTTCTT | + |
Preference number: 4 (lower is better) Translates to: EAAQETTKNKHSDPAPWRIVAEP*PHPGFL Trigger: AAGAAATCCAGGATGAGGCCAGGGCTCAGCTACAAT...TCTCCAGGGTGCTGGATCAGAATGCTTATTCTTGGTTGTTTCCTGTGCTGCTTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062108.10 ENSMUST00000161764.8 |
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CDS-3UTR TCA 90 bp | TTCTTTCCAAGACCAGACCTCCAGAGCCTGGGTGAGGAAGAACAGTCTTGGTGTTTGTCCAAACAACACTaGATCTTCTGGATACTTTTG | + |
Preference number: 4 (lower is better) Translates to: FFPRPDLQSLGEEEQSWCLSKQH*IFWILL Trigger: CAAAAGTATCCAGAAGATTCAGTGTTGTTTGGACAA...ACACCAAGACTGTTCTTCCTCACCCAGGCTCTGGAGGTCTGGTCTTGGAAAGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062108.10 ENSMUST00000161764.8 |
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CDS-3UTR TCA 90 bp | GCAGTTAGCCTCAACCACCCACTTTCTCAAATGCAGGTGCATCTAGACCAAGCATCTTGGCTAGATGACTaGAATTTACCTTATCCAGCT | + |
Preference number: 4 (lower is better) Translates to: AVSLNHPLSQMQVHLDQASWLDD*NLPYPA Trigger: AGCTGGATAAGGTAAATTTCAGTCATCTAGCCAAGA...TGCTTGGTCTAGATGCACCTGCATTTGAGAAAGTGGGTGGTTGAGGCTAACTGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062108.10 ENSMUST00000161764.8 |
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CDS-3UTR TCA 90 bp | AAAGCACCAGCAGTTAGCCTCAACCACCCACTTTCTCAAATGCAGGTGCATCTATCTTGGCTAGATGACTaGAATTTACCTTATCCAGCT | + |
Preference number: 4 (lower is better) Translates to: KAPAVSLNHPLSQMQVHLSWLDD*NLPYPA Trigger: AGCTGGATAAGGTAAATTTCAGTCATCTAGCCAAGA...TAGATGCACCTGCATTTGAGAAAGTGGGTGGTTGAGGCTAACTGCTGGTGCTTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062108.10 ENSMUST00000161764.8 |
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CDS TCA 90 bp | GGGCTCCCCGGGCTTCCGAGTTACAGGTGGCCACAGAGTGGCCAATaGGATGCAGGTGGTTCTGGGCCCTCTGCACCTGCCTCATCCGCT | + |
Preference number: 5 (lower is better) Translates to: GLPGLPSYRWPQSGQ*DAGGSGPSAPASSA Trigger: AGCGGATGAGGCAGGTGCAGAGGGCCCAGAACCACCTGCATCTCATTGGCCACTCTGTGGCCACCTGTAACTCGGAAGCCCGGGGAGCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062108.10 ENSMUST00000161764.8 |
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CDS GCA 90 bp | CCCCGGGCTTCCGAGTTACAGGTGGCCACAGAGTGGCCAATGAGATaGAGGTGGTTCTGGGCCCTCTGCACCTGCCTCATCCGCTTGCCG | + |
Preference number: 5 (lower is better) Translates to: PRASELQVATEWPMR*RWFWALCTCLIRLP Trigger: CGGCAAGCGGATGAGGCAGGTGCAGAGGGCCCAGAACCACCTGCATCTCATTGGCCACTCTGTGGCCACCTGTAACTCGGAAGCCCGGGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062108.10 ENSMUST00000161764.8 |
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CDS CCA 90 bp | CTCTCCTGGGCTCCCCGGGCTTCCGAGTTACAGGTGGCCACAGAGTaGCCAATGAGATGCAGGTGGTTCTGGGCCCTCTGCACCTGCCTC | + |
Preference number: 5 (lower is better) Translates to: LSWAPRASELQVATE*PMRCRWFWALCTCL Trigger: GAGGCAGGTGCAGAGGGCCCAGAACCACCTGCATCTCATTGGCCACTCTGTGGCCACCTGTAACTCGGAAGCCCGGGGAGCCCAGGAGAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062108.10 ENSMUST00000161764.8 |
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CDS TCA 90 bp | GGTCTTCCAGCACGCTCAGCAGGCTCCCACTGGAGCAGTACTCCATaGTTAGCACCTTCTGCCGGCTGCCTCCCGTTTCCTCCACTGCGA | + |
Preference number: 5 (lower is better) Translates to: GLPARSAGSHWSSTP*LAPSAGCLPFPPLR Trigger: TCGCAGTGGAGGAAACGGGAGGCAGCCGGCAGAAGGTGCTAATCATGGAGTACTGCTCCAGTGGGAGCCTGCTGAGCGTGCTGGAAGACC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062108.10 ENSMUST00000159195.2 |
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CDS TCA 90 bp | AGGAGGGCTGTCCGTGTGACCTCCAGTGTCTGCTGGCACGTGTCCTaGAGCACCTCCAGGACCCAATGTAACCCCCGAAGCATCAACGCC | + |
Preference number: 5 (lower is better) Translates to: RRAVRVTSSVCWHVS*STSRTQCNPRSINA Trigger: GGCGTTGATGCTTCGGGGGTTACATTGGGTCCTGGAGGTGCTTCAGGACACGTGCCAGCAGACACTGGAGGTCACACGGACAGCCCTCCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000062108.10 ENSMUST00000161764.8 |
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CDS TCA 90 bp | CTCTGCACCTGCCTCATCCGCTTGCCGTGTGTGACCAGCGACACCTaGTACGTCTGCACACACTCCTCCTGGAACACCTGCAGCAGCCTC | + |
Preference number: 5 (lower is better) Translates to: LCTCLIRLPCVTSDT*YVCTHSSWNTCSSL Trigger: GAGGCTGCTGCAGGTGTTCCAGGAGGAGTGTGTGCAGACGTATCAGGTGTCGCTGGTCACACACGGCAAGCGGATGAGGCAGGTGCAGAG 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062108.10 ENSMUST00000161764.8 |
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CDS TCA 90 bp | GGTGGTTCTGGGCCCTCTGCACCTGCCTCATCCGCTTGCCGTGTGTaGCCAGCGACACCTGATACGTCTGCACACACTCCTCCTGGAACA | + |
Preference number: 5 (lower is better) Translates to: GGSGPSAPASSACRV*PATPDTSAHTPPGT Trigger: TGTTCCAGGAGGAGTGTGTGCAGACGTATCAGGTGTCGCTGGTCACACACGGCAAGCGGATGAGGCAGGTGCAGAGGGCCCAGAACCACC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062108.10 ENSMUST00000161764.8 |
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CDS TCA 90 bp | GGTCTTCCAGCACGCTCAGCAGGCTCCCACTGGAGCAGTACTCCATaGTTAGCACCTTCTGCCGGCTGCCTCCCTGAACCTCAGGAGGTC | + |
Preference number: 5 (lower is better) Translates to: GLPARSAGSHWSSTP*LAPSAGCLPEPQEV Trigger: GACCTCCTGAGGTTCAGGGAGGCAGCCGGCAGAAGGTGCTAATCATGGAGTACTGCTCCAGTGGGAGCCTGCTGAGCGTGCTGGAAGACC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161764.8 |
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CDS CCA 90 bp | GAGTTACAGGTGGCCACAGAGTGGCCAATGAGATGCAGGTGGTTCTaGGCCCTCTGCACCTGCCTCATCCGCTTGCCGTGTGTGACCAGC | + |
Preference number: 5 (lower is better) Translates to: ELQVATEWPMRCRWF*ALCTCLIRLPCVTS Trigger: GCTGGTCACACACGGCAAGCGGATGAGGCAGGTGCAGAGGGCCCAGAACCACCTGCATCTCATTGGCCACTCTGTGGCCACCTGTAACTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062108.10 ENSMUST00000161764.8 |
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CDS TCA 90 bp | TGGGCGATGTGCTGGGCTGAGAGGCTTGGCTCAAGGACACAAGGGTaGCCCTCGAAGAGGTACTCCTGGTGTTTGGGGGTCACGTTGGTC | + |
Preference number: 5 (lower is better) Translates to: WAMCWAERLGSRTQG*PSKRYSWCLGVTLV Trigger: GACCAACGTGACCCCCAAACACCAGGAGTACCTCTTCGAGGGTCACCCTTGTGTCCTTGAGCCAAGCCTCTCAGCCCAGCACATCGCCCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000062108.10 ENSMUST00000161764.8 |
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CDS CCA 90 bp | TCGCTGGACATGCTGAACAGAGTTAGAGGGCTGCTGGCAGCTGTGTaGGCGATGTGCTGGGCTGAGAGGCTTGGCTCAAGGACACAAGGG | + |
Preference number: 5 (lower is better) Translates to: SLDMLNRVRGLLAAV*AMCWAERLGSRTQG Trigger: CCCTTGTGTCCTTGAGCCAAGCCTCTCAGCCCAGCACATCGCCCACACAGCTGCCAGCAGCCCTCTAACTCTGTTCAGCATGTCCAGCGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062108.10 ENSMUST00000161764.8 |
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CDS-3UTR CAA 90 bp | GGCTGTGGTAGCCGCATGGTCTCTTCTGTAGATACTGCCTGGGATGGCCAGGAGCTGTACATGATCTCTTaGTTGCGCCGGGGCCCACCG | + |
Preference number: 5 (lower is better) Translates to: GCGSRMVSSVDTAWDGQELYMIS*LRRGPP Trigger: CGGTGGGCCCCGGCGCAACAAAGAGATCATGTACAG...CTCCTGGCCATCCCAGGCAGTATCTACAGAAGAGACCATGCGGCTACCACAGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062108.10 ENSMUST00000161764.8 |
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CDS-3UTR CAA 90 bp | GGCTGTGGTAGCCGCATGGTCTCTTCTGTAGATACTGCCTGGGATGGCCAGGAGGCTGGGCTGAGAGGCTaGGCTCAAGGACACAAGGGT | + |
Preference number: 5 (lower is better) Translates to: GCGSRMVSSVDTAWDGQEAGLRG*AQGHKG Trigger: ACCCTTGTGTCCTTGAGCCAAGCCTCTCAGCCCAGC...CTCCTGGCCATCCCAGGCAGTATCTACAGAAGAGACCATGCGGCTACCACAGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062108.10 ENSMUST00000161764.8 |
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CDS-3UTR CAA 90 bp | GCAGAGCGTGAGAGGGCTGAGCCTTTTCTTTCCAAGACCAGACCTCCAGAGCCTACCTGCCTCATCCGCTaGCCGTGTGTGACCAGCGAC | + |
Preference number: 5 (lower is better) Translates to: AERERAEPFLSKTRPPEPTCLIR*PCVTSD Trigger: GTCGCTGGTCACACACGGCAAGCGGATGAGGCAGGT...AGGCTCTGGAGGTCTGGTCTTGGAAAGAAAAGGCTCAGCCCTCTCACGCTCTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062108.10 ENSMUST00000161764.8 |
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CDS CCA 90 bp | CAGCAACCACCTCCCCGGATTTCTTGTTTCGGGCCTTGTACACACTaGCAGTGGCCCCCTGCCCTAGCAGGTCATCAGTATGCCACAGGT | + |
Preference number: 5 (lower is better) Translates to: QQPPPRISCFGPCTH*QWPPALAGHQYATG Trigger: ACCTGTGGCATACTGATGACCTGCTAGGGCAGGGGGCCACTGCCAGTGTGTACAAGGCCCGAAACAAGAAATCCGGGGAGGTGGTTGCTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000062108.10 ENSMUST00000159195.2 ENSMUST00000161764.8 |
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CDS CCA 90 bp | AGAGTCTGCAGCCTGGTTCTTAGCTCTGTGGCCTCCTTTCGTTCCTaGACGTCAGGCATCCCCGCTCCACTGCTGAACCTTTCAGTGCCC | + |
Preference number: 5 (lower is better) Translates to: RVCSLVLSSVASFRS*TSGIPAPLLNLSVP Trigger: GGGCACTGAAAGGTTCAGCAGTGGAGCGGGGATGCCTGACGTCCAGGAACGAAAGGAGGCCACAGAGCTAAGAACCAGGCTGCAGACTCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062108.10 ENSMUST00000161764.8 |
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CDS-3UTR CAA 90 bp | GAGCGTGAGAGGGCTGAGCCTTTTCTTTCCAAGACCAGACCTCCAGAGCCTGGGTACATGATCTCTTTGTaGCGCCGGGGCCCACCGAAG | + |
Preference number: 5 (lower is better) Translates to: ERERAEPFLSKTRPPEPGYMISL*RRGPPK Trigger: CTTCGGTGGGCCCCGGCGCAACAAAGAGATCATGTA...CCCAGGCTCTGGAGGTCTGGTCTTGGAAAGAAAAGGCTCAGCCCTCTCACGCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000062108.10 ENSMUST00000161764.8 |
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CDS-3UTR CAA 90 bp | TTCTGTAGATACTGCCTGGGATGGCCAGGAGTCCCTGTCCTAGCTGCTTCCCAAACCTGCCTCATCCGCTaGCCGTGTGTGACCAGCGAC | + |
Preference number: 5 (lower is better) Translates to: FCRYCLGWPGVPVLAASQTCLIR*PCVTSD Trigger: GTCGCTGGTCACACACGGCAAGCGGATGAGGCAGGT...TTGGGAAGCAGCTAGGACAGGGACTCCTGGCCATCCCAGGCAGTATCTACAGAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062108.10 ENSMUST00000161764.8 |
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CDS TCA 90 bp | GGTGACACCTCAGCTCCCTGTTCGGAAGCTCTGTCCAGAAGGAGCTaGTCAAAGATCTTGTTCAGACTCTCCTGGGCTCCCCGGGCTTCC | + |
Preference number: 5 (lower is better) Translates to: GDTSAPCSEALSRRS*SKILFRLSWAPRAS Trigger: GGAAGCCCGGGGAGCCCAGGAGAGTCTGAACAAGATCTTTGATCAGCTCCTTCTGGACAGAGCTTCCGAACAGGGAGCTGAGGTGTCACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062108.10 ENSMUST00000161764.8 |
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CDS TCA 90 bp | CTGCCGGCTGCCTCCCTGAACCTCAGGAGGTCGCCGATAGCTGGCTaGGTTGAAGACCTTTACAGCAACCACCTCCCCGGATTTCTTGTT | + |
Preference number: 5 (lower is better) Translates to: LPAASLNLRRSPIAG*VEDLYSNHLPGFLV Trigger: AACAAGAAATCCGGGGAGGTGGTTGCTGTAAAGGTCTTCAACTCAGCCAGCTATCGGCGACCTCCTGAGGTTCAGGGAGGCAGCCGGCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161764.8 |
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CDS GCA 90 bp | CTCAGCAGGCTCCCACTGGAGCAGTACTCCATGATTAGCACCTTCTaGCGGCTGCCTCCCGTTTCCTCCACTGCGAATAGCTTCACGATG | + |
Preference number: 5 (lower is better) Translates to: LSRLPLEQYSMISTF*RLPPVSSTANSFTM Trigger: CATCGTGAAGCTATTCGCAGTGGAGGAAACGGGAGGCAGCCGGCAGAAGGTGCTAATCATGGAGTACTGCTCCAGTGGGAGCCTGCTGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062108.10 ENSMUST00000159195.2 |
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CDS CCA 90 bp | ACTGATCAAAGCCCCAGCACTTATCCTCTTCCACCTCCAGGATGTTaGCCAGGATGGGCACCAGCTGGTTCTGCAGTCCCATGGACAGTC | + |
Preference number: 5 (lower is better) Translates to: TDQSPSTYPLPPPGC*PGWAPAGSAVPWTV Trigger: GACTGTCCATGGGACTGCAGAACCAGCTGGTGCCCATCCTGGCCAACATCCTGGAGGTGGAAGAGGATAAGTGCTGGGGCTTTGATCAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062108.10 ENSMUST00000161764.8 |
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CDS-3UTR CAA 90 bp | GCAGAGCGTGAGAGGGCTGAGCCTTTTCTTTCCAAGACCAGACCTCCAGAGCCTTTCTTGTTTCGGGCCTaGTACACACTGGCAGTGGCC | + |
Preference number: 5 (lower is better) Translates to: AERERAEPFLSKTRPPEPFLFRA*YTLAVA Trigger: GGCCACTGCCAGTGTGTACAAGGCCCGAAACAAGAA...AGGCTCTGGAGGTCTGGTCTTGGAAAGAAAAGGCTCAGCCCTCTCACGCTCTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062108.10 ENSMUST00000161764.8 |
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CDS-3UTR CAA 90 bp | TTCTGTAGATACTGCCTGGGATGGCCAGGAGTCCCTGTCCTAGCTGCTTCCCAAAGGTACTCCTGGTGTTaGGGGGTCACGTTGGTCTGC | + |
Preference number: 5 (lower is better) Translates to: FCRYCLGWPGVPVLAASQRYSWC*GVTLVC Trigger: GCAGACCAACGTGACCCCCAAACACCAGGAGTACCT...TTGGGAAGCAGCTAGGACAGGGACTCCTGGCCATCCCAGGCAGTATCTACAGAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000062108.10 ENSMUST00000161764.8 |
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CDS-3UTR CAA 90 bp | AGATACTGCCTGGGATGGCCAGGAGTCCCTGTCCTAGCTGCTTCCCAAGAGGACTCGATGAGTCGGTTGTaGTCCTGGAGATCAAAGGCC | + |
Preference number: 5 (lower is better) Translates to: RYCLGWPGVPVLAASQEDSMSRL*SWRSKA Trigger: GGCCTTTGATCTCCAGGACAACAACCGACTCATCGA...GTCCTCTTGGGAAGCAGCTAGGACAGGGACTCCTGGCCATCCCAGGCAGTATCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062108.10 ENSMUST00000161764.8 |
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CDS TCA 90 bp | ACTCCCTCACCTGAACCTCAGGAGGTCGCCGATAGCTGGCTGAGTTaGAGACCTTTACAGCAACCACCTCCCCGGATTTCTTGTTTCGGG | + |
Preference number: 5 (lower is better) Translates to: TPSPEPQEVADSWLS*RPLQQPPPRISCFG Trigger: CCCGAAACAAGAAATCCGGGGAGGTGGTTGCTGTAAAGGTCTTCAACTCAGCCAGCTATCGGCGACCTCCTGAGGTTCAGGTGAGGGAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062108.10 ENSMUST00000159195.2 |
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CDS-3UTR CAA 90 bp | TGTTGGCCAATGGCCAATGGCCAAGAGGGAGGTAGGCTAGTGAGATGGAACCAGCACACCAAATGCCTTTaGCTGGGGTTTGCGCAGCAC | + |
Preference number: 5 (lower is better) Translates to: CWPMANGQEGGRLVRWNQHTKCL*LGFAQH Trigger: GTGCTGCGCAAACCCCAGCAAAAGGCATTTGGTGTG...CTGGTTCCATCTCACTAGCCTACCTCCCTCTTGGCCATTGGCCATTGGCCAACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062108.10 ENSMUST00000161764.8 |
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CDS-3UTR CAA 90 bp | GAGCGTGAGAGGGCTGAGCCTTTTCTTTCCAAGACCAGACCTCCAGAGCCTGGGACAGCTCAGGCTCCTTaGGGTTTCTGTGACATTGTG | + |
Preference number: 5 (lower is better) Translates to: ERERAEPFLSKTRPPEPGTAQAP*GFCDIV Trigger: CACAATGTCACAGAAACCCAAAGGAGCCTGAGCTGT...CCCAGGCTCTGGAGGTCTGGTCTTGGAAAGAAAAGGCTCAGCCCTCTCACGCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062108.10 ENSMUST00000161764.8 |
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CDS CCA 90 bp | ACCCCAATACTCCAGAGATCCACAGTCACACCAAATGCCTTTTGCTaGGGTTTGCGCAGCACTGCACGCTCATACATGTCAGGGTGCAGG | + |
Preference number: 5 (lower is better) Translates to: TPILQRSTVTPNAFC*GLRSTARSYMSGCR Trigger: CCTGCACCCTGACATGTATGAGCGTGCAGTGCTGCGCAAACCCCAGCAAAAGGCATTTGGTGTGACTGTGGATCTCTGGAGTATTGGGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000062108.10 ENSMUST00000161764.8 |
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CDS-3UTR CAA 90 bp | TTCTTTCCAAGACCAGACCTCCAGAGCCTGGGTGAGGAAGAACAGTCTTGGTGTAGGTACTCCTGGTGTTaGGGGGTCACGTTGGTCTGC | + |
Preference number: 5 (lower is better) Translates to: FFPRPDLQSLGEEEQSWCRYSWC*GVTLVC Trigger: GCAGACCAACGTGACCCCCAAACACCAGGAGTACCT...ACACCAAGACTGTTCTTCCTCACCCAGGCTCTGGAGGTCTGGTCTTGGAAAGAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000062108.10 ENSMUST00000161764.8 |
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CDS-3UTR CAA 90 bp | AAGCGTTCCTCGGAGAAAAGGTCAAGGAGAATCCTCAAAGCACCAGCAGTTAGCGCTGGGCTGAGAGGCTaGGCTCAAGGACACAAGGGT | + |
Preference number: 5 (lower is better) Translates to: KRSSEKRSRRILKAPAVSAGLRG*AQGHKG Trigger: ACCCTTGTGTCCTTGAGCCAAGCCTCTCAGCCCAGC...GCTAACTGCTGGTGCTTTGAGGATTCTCCTTGACCTTTTCTCCGAGGAACGCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062108.10 ENSMUST00000161764.8 |
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CDS TCA 90 bp | CTCAAACTCCCTCACCTGAACCTCAGGAGGTCGCCGATAGCTGGCTaGGTTGAAGACCTTTACAGCAACCACCTCCCCGGATTTCTTGTT | + |
Preference number: 5 (lower is better) Translates to: LKLPHLNLRRSPIAG*VEDLYSNHLPGFLV Trigger: AACAAGAAATCCGGGGAGGTGGTTGCTGTAAAGGTCTTCAACTCAGCCAGCTATCGGCGACCTCCTGAGGTTCAGGTGAGGGAGTTTGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062108.10 ENSMUST00000159195.2 |
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CDS TCA 90 bp | TGGATGACCGTTCGCTGCAGAATGTCACTGGTCTCCGCGAAGAACTaGTCAAAGCCCCAGCACTTATCCTCTTCCACCTCCAGGATGTTG | + |
Preference number: 5 (lower is better) Translates to: WMTVRCRMSLVSAKN*SKPQHLSSSTSRML Trigger: CAACATCCTGGAGGTGGAAGAGGATAAGTGCTGGGGCTTTGATCAGTTCTTCGCGGAGACCAGTGACATTCTGCAGCGAACGGTCATCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062108.10 ENSMUST00000161764.8 |
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CDS CCA 90 bp | GCTCAAGGACACAAGGGTGACCCTCGAAGAGGTACTCCTGGTGTTTaGGGGTCACGTTGGTCTGCTCATATACAGCCTCCAAAAAGATGG | + |
Preference number: 5 (lower is better) Translates to: AQGHKGDPRRGTPGV*GSRWSAHIQPPKRW Trigger: CCATCTTTTTGGAGGCTGTATATGAGCAGACCAACGTGACCCCCAAACACCAGGAGTACCTCTTCGAGGGTCACCCTTGTGTCCTTGAGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000062108.10 ENSMUST00000161764.8 |
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CDS-3UTR CAA 90 bp | AAAGCACCAGCAGTTAGCCTCAACCACCCACTTTCTCAAATGCAGGTGCATCTACTGTACATGATCTCTTaGTTGCGCCGGGGCCCACCG | + |
Preference number: 5 (lower is better) Translates to: KAPAVSLNHPLSQMQVHLLYMIS*LRRGPP Trigger: CGGTGGGCCCCGGCGCAACAAAGAGATCATGTACAG...TAGATGCACCTGCATTTGAGAAAGTGGGTGGTTGAGGCTAACTGCTGGTGCTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062108.10 ENSMUST00000161764.8 |
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CDS GCA 90 bp | TACTCCAGAGATCCACAGTCACACCAAATGCCTTTTGCTGGGGTTTaGGCAGCACTGCACGCTCATACATGTCAGGGTGCAGGTATTCCT | + |
Preference number: 5 (lower is better) Translates to: YSRDPQSHQMPFAGV*AALHAHTCQGAGIP Trigger: AGGAATACCTGCACCCTGACATGTATGAGCGTGCAGTGCTGCGCAAACCCCAGCAAAAGGCATTTGGTGTGACTGTGGATCTCTGGAGTA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000062108.10 ENSMUST00000161764.8 |
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CDS GCA 90 bp | ATCCACAGTCACACCAAATGCCTTTTGCTGGGGTTTGCGCAGCACTaGACGCTCATACATGTCAGGGTGCAGGTATTCCTCTGTACCATA | + |
Preference number: 5 (lower is better) Translates to: IHSHTKCLLLGFAQH*TLIHVRVQVFLCTI Trigger: TATGGTACAGAGGAATACCTGCACCCTGACATGTATGAGCGTGCAGTGCTGCGCAAACCCCAGCAAAAGGCATTTGGTGTGACTGTGGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000062108.10 ENSMUST00000161764.8 |
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CDS GCA 90 bp | TCTGTGACATTGTGGGAACATTTAGACAGGATCTCTGAGAGAGTCTaGAGCCTGGTTCTTAGCTCTGTGGCCTCCTTTCGTTCCTGGACG | + |
Preference number: 5 (lower is better) Translates to: SVTLWEHLDRISERV*SLVLSSVASFRSWT Trigger: CGTCCAGGAACGAAAGGAGGCCACAGAGCTAAGAACCAGGCTGCAGACTCTCTCAGAGATCCTGTCTAAATGTTCCCACAATGTCACAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062108.10 ENSMUST00000161764.8 |
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CDS CCA 90 bp | AAGGGTGACCCTCGAAGAGGTACTCCTGGTGTTTGGGGGTCACGTTaGTCTGCTCATATACAGCCTCCAAAAAGATGGCAATCGTGTTGT | + |
Preference number: 5 (lower is better) Translates to: KGDPRRGTPGVWGSR*SAHIQPPKRWQSCC Trigger: ACAACACGATTGCCATCTTTTTGGAGGCTGTATATGAGCAGACCAACGTGACCCCCAAACACCAGGAGTACCTCTTCGAGGGTCACCCTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000062108.10 ENSMUST00000161764.8 |
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CDS-3UTR CAA 90 bp | AAAGCACCAGCAGTTAGCCTCAACCACCCACTTTCTCAAATGCAGGTGCATCTATTCTTGTTTCGGGCCTaGTACACACTGGCAGTGGCC | + |
Preference number: 5 (lower is better) Translates to: KAPAVSLNHPLSQMQVHLFLFRA*YTLAVA Trigger: GGCCACTGCCAGTGTGTACAAGGCCCGAAACAAGAA...TAGATGCACCTGCATTTGAGAAAGTGGGTGGTTGAGGCTAACTGCTGGTGCTTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062108.10 ENSMUST00000161764.8 |
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CDS-3UTR CAA 90 bp | AAAGCACCAGCAGTTAGCCTCAACCACCCACTTTCTCAAATGCAGGTGCATCTACACACCAAATGCCTTTaGCTGGGGTTTGCGCAGCAC | + |
Preference number: 5 (lower is better) Translates to: KAPAVSLNHPLSQMQVHLHTKCL*LGFAQH Trigger: GTGCTGCGCAAACCCCAGCAAAAGGCATTTGGTGTG...TAGATGCACCTGCATTTGAGAAAGTGGGTGGTTGAGGCTAACTGCTGGTGCTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062108.10 ENSMUST00000161764.8 |
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CDS-3UTR CAA 90 bp | AAGCGTTCCTCGGAGAAAAGGTCAAGGAGAATCCTCAAAGCACCAGCAGTTAGCTCGATGAGTCGGTTGTaGTCCTGGAGATCAAAGGCC | + |
Preference number: 5 (lower is better) Translates to: KRSSEKRSRRILKAPAVSSMSRL*SWRSKA Trigger: GGCCTTTGATCTCCAGGACAACAACCGACTCATCGA...GCTAACTGCTGGTGCTTTGAGGATTCTCCTTGACCTTTTCTCCGAGGAACGCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062108.10 ENSMUST00000161764.8 |
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CDS-3UTR CAA 90 bp | CTCTCCTTAGGACTTTGGGTTCCAACATCTGTCCAGTTAGCATGGCTGTGGTTGACAGCTCAGGCTCCTTaGGGTTTCTGTGACATTGTG | + |
Preference number: 5 (lower is better) Translates to: LSLGLWVPTSVQLAWLWLTAQAP*GFCDIV Trigger: CACAATGTCACAGAAACCCAAAGGAGCCTGAGCTGT...CAACCACAGCCATGCTAACTGGACAGATGTTGGAACCCAAAGTCCTAAGGAGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062108.10 ENSMUST00000161764.8 |
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CDS-3UTR CAA 90 bp | CTCAACCACCCACTTTCTCAAATGCAGGTGCATCTAGACCAAGCACAGAGGGGCTTTACCTTATCCAGCTaGTGGATCTGCTCCTCATTG | + |
Preference number: 5 (lower is better) Translates to: LNHPLSQMQVHLDQAQRGFTLSS*WICSSL Trigger: CAATGAGGAGCAGATCCACAAGCTGGATAAGGTAAA...GCCCCTCTGTGCTTGGTCTAGATGCACCTGCATTTGAGAAAGTGGGTGGTTGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062108.10 ENSMUST00000161764.8 |
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CDS-3UTR CAA 90 bp | GCACAGGAAACAACCAAGAATAAGCATTCTGATCCAGCACCCTGGAGAGGCAGGTTTACCTTATCCAGCTaGTGGATCTGCTCCTCATTG | + |
Preference number: 5 (lower is better) Translates to: AQETTKNKHSDPAPWRGRFTLSS*WICSSL Trigger: CAATGAGGAGCAGATCCACAAGCTGGATAAGGTAAA...CCTGCCTCTCCAGGGTGCTGGATCAGAATGCTTATTCTTGGTTGTTTCCTGTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062108.10 ENSMUST00000161764.8 |
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CDS CCA 90 bp | GCCGATGGAACTCTATGTAACCGTTCGATGAGTCGGTTGTTGTCCTaGAGATCAAAGGCCAATAGCTTCATATCATTACAAAGCTCCTGC | + |
Preference number: 5 (lower is better) Translates to: ADGTLCNRSMSRLLS*RSKANSFISLQSSC Trigger: GCAGGAGCTTTGTAATGATATGAAGCTATTGGCCTTTGATCTCCAGGACAACAACCGACTCATCGAACGGTTACATAGAGTTCCATCGGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062108.10 ENSMUST00000161764.8 |
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CDS TCA 72 bp | AGGGCTGCTGGCAGCTGTGTGGGCGATGTGCTGGGCTaGGAGGCTTGGCTCAAGGACACAAGGGTGACCCTC | + |
Preference number: 6 (lower is better) Translates to: RAAGSCVGDVLG*EAWLKDTRVTL Trigger: GAGGGTCACCCTTGTGTCCTTGAGCCAAGCCTCTCAGCCCAGCACATCGCCCACACAGCTGCCAGCAGCCCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062108.10 ENSMUST00000161764.8 |
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CDS CCA 72 bp | GCTCCCCGGGCTTCCGAGTTACAGGTGGCCACAGAGTaGCCAATGAGATGCAGGTGGTTCTGGGCCCTCTGC | + |
Preference number: 6 (lower is better) Translates to: APRASELQVATE*PMRCRWFWALC Trigger: GCAGAGGGCCCAGAACCACCTGCATCTCATTGGCCACTCTGTGGCCACCTGTAACTCGGAAGCCCGGGGAGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062108.10 ENSMUST00000161764.8 |
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CDS CAA 90 bp | GAGGGCTGCTGGCAGCTGTGTGGGCGATGTGCTGGGCTGAGAGGCTaGGCTCAAGGACACAAGGGTGACCCTCGAAGAGGTACTCCTGGT | + |
Preference number: 6 (lower is better) Translates to: EGCWQLCGRCAGLRG*AQGHKGDPRRGTPG Trigger: ACCAGGAGTACCTCTTCGAGGGTCACCCTTGTGTCCTTGAGCCAAGCCTCTCAGCCCAGCACATCGCCCACACAGCTGCCAGCAGCCCTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062108.10 ENSMUST00000161764.8 |
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CDS TCA 72 bp | GGGCCCTCTGCACCTGCCTCATCCGCTTGCCGTGTGTaGCCAGCGACACCTGATACGTCTGCACACACTCCT | + |
Preference number: 6 (lower is better) Translates to: GPSAPASSACRV*PATPDTSAHTP Trigger: AGGAGTGTGTGCAGACGTATCAGGTGTCGCTGGTCACACACGGCAAGCGGATGAGGCAGGTGCAGAGGGCCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062108.10 ENSMUST00000161764.8 |
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CDS TCA 72 bp | GGGCTTCCGAGTTACAGGTGGCCACAGAGTGGCCAATaGGATGCAGGTGGTTCTGGGCCCTCTGCACCTGCC | + |
Preference number: 6 (lower is better) Translates to: GLPSYRWPQSGQ*DAGGSGPSAPA Trigger: GGCAGGTGCAGAGGGCCCAGAACCACCTGCATCTCATTGGCCACTCTGTGGCCACCTGTAACTCGGAAGCCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062108.10 ENSMUST00000161764.8 |
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CDS TCA 72 bp | CGGATCAGGGCCGGGATGAGGAGCCATAGGTTGCGGTaGCACCTCAGCTCCCTGTTCGGAAGCTCTGTCCAG | + |
Preference number: 6 (lower is better) Translates to: RIRAGMRSHRLR*HLSSLFGSSVQ Trigger: CTGGACAGAGCTTCCGAACAGGGAGCTGAGGTGTCACCGCAACCTATGGCTCCTCATCCCGGCCCTGATCCG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062108.10 ENSMUST00000161764.8 |
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CDS GCA 72 bp | GAGTGGCCAATGAGATGCAGGTGGTTCTGGGCCCTCTaGACCTGCCTCATCCGCTTGCCGTGTGTGACCAGC | + |
Preference number: 6 (lower is better) Translates to: EWPMRCRWFWAL*TCLIRLPCVTS Trigger: GCTGGTCACACACGGCAAGCGGATGAGGCAGGTGCAGAGGGCCCAGAACCACCTGCATCTCATTGGCCACTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062108.10 ENSMUST00000161764.8 |
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CDS TCA 72 bp | GCACGCTCAGCAGGCTCCCACTGGAGCAGTACTCCATaGTTAGCACCTTCTGCCGGCTGCCTCCCGTTTCCT | + |
Preference number: 6 (lower is better) Translates to: ARSAGSHWSSTP*LAPSAGCLPFP Trigger: AGGAAACGGGAGGCAGCCGGCAGAAGGTGCTAATCATGGAGTACTGCTCCAGTGGGAGCCTGCTGAGCGTGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062108.10 ENSMUST00000159195.2 |
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CDS TCA 72 bp | GTCCGTGTGACCTCCAGTGTCTGCTGGCACGTGTCCTaGAGCACCTCCAGGACCCAATGTAACCCCCGAAGC | + |
Preference number: 6 (lower is better) Translates to: VRVTSSVCWHVS*STSRTQCNPRS Trigger: GCTTCGGGGGTTACATTGGGTCCTGGAGGTGCTTCAGGACACGTGCCAGCAGACACTGGAGGTCACACGGAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000062108.10 ENSMUST00000161764.8 |
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CDS TCA 72 bp | ATGTGGAAGACCAGGTCCTTCGGATCAGGGCCGGGATaGGGAGCCATAGGTTGCGGTGACACCTCAGCTCCC | + |
Preference number: 6 (lower is better) Translates to: MWKTRSFGSGPG*GAIGCGDTSAP Trigger: GGGAGCTGAGGTGTCACCGCAACCTATGGCTCCTCATCCCGGCCCTGATCCGAAGGACCTGGTCTTCCACAT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062108.10 ENSMUST00000161764.8 |
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CDS GCA 72 bp | CCCACCGAAGGGGATGAAGGGCAGACTGCCTGTGGCTaGGTGGTACAGGGTCACCCCAATACTCCAGAGATC | + |
Preference number: 6 (lower is better) Translates to: PTEGDEGQTACG*VVQGHPNTPEI Trigger: GATCTCTGGAGTATTGGGGTGACCCTGTACCACGCAGCCACAGGCAGTCTGCCCTTCATCCCCTTCGGTGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000062108.10 ENSMUST00000161764.8 |
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CDS CAA 72 bp | CCCTCCTCGCCCACCAGGCGCATGATGTTCCCAGGTTaGATGTCCCGATGGACAATGCCATTCTCCCGCAGG | + |
Preference number: 6 (lower is better) Translates to: PSSPTRRMMFPG*MSRWTMPFSRR Trigger: CCTGCGGGAGAATGGCATTGTCCATCGGGACATCAAACCTGGGAACATCATGCGCCTGGTGGGCGAGGAGGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062108.10 ENSMUST00000161764.8 |
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CDS TCA 72 bp | TGCTGGGCTGAGAGGCTTGGCTCAAGGACACAAGGGTaGCCCTCGAAGAGGTACTCCTGGTGTTTGGGGGTC | + |
Preference number: 6 (lower is better) Translates to: CWAERLGSRTQG*PSKRYSWCLGV Trigger: GACCCCCAAACACCAGGAGTACCTCTTCGAGGGTCACCCTTGTGTCCTTGAGCCAAGCCTCTCAGCCCAGCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000062108.10 ENSMUST00000161764.8 |
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CDS TCA 72 bp | GCCTCCCTGAACCTCAGGAGGTCGCCGATAGCTGGCTaGGTTGAAGACCTTTACAGCAACCACCTCCCCGGA | + |
Preference number: 6 (lower is better) Translates to: ASLNLRRSPIAG*VEDLYSNHLPG Trigger: TCCGGGGAGGTGGTTGCTGTAAAGGTCTTCAACTCAGCCAGCTATCGGCGACCTCCTGAGGTTCAGGGAGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161764.8 |
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CDS CCA 72 bp | AGCCCCAGCACTTATCCTCTTCCACCTCCAGGATGTTaGCCAGGATGGGCACCAGCTGGTTCTGCAGTCCCA | + |
Preference number: 6 (lower is better) Translates to: SPSTYPLPPPGC*PGWAPAGSAVP Trigger: TGGGACTGCAGAACCAGCTGGTGCCCATCCTGGCCAACATCCTGGAGGTGGAAGAGGATAAGTGCTGGGGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062108.10 ENSMUST00000161764.8 |
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CDS CCA 72 bp | ATGCTGAACAGAGTTAGAGGGCTGCTGGCAGCTGTGTaGGCGATGTGCTGGGCTGAGAGGCTTGGCTCAAGG | + |
Preference number: 6 (lower is better) Translates to: MLNRVRGLLAAV*AMCWAERLGSR Trigger: CCTTGAGCCAAGCCTCTCAGCCCAGCACATCGCCCACACAGCTGCCAGCAGCCCTCTAACTCTGTTCAGCAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062108.10 ENSMUST00000161764.8 |
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CDS CCA 72 bp | TTACAGGTGGCCACAGAGTGGCCAATGAGATGCAGGTaGTTCTGGGCCCTCTGCACCTGCCTCATCCGCTTG | + |
Preference number: 6 (lower is better) Translates to: LQVATEWPMRCR*FWALCTCLIRL Trigger: CAAGCGGATGAGGCAGGTGCAGAGGGCCCAGAACCACCTGCATCTCATTGGCCACTCTGTGGCCACCTGTAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062108.10 ENSMUST00000161764.8 |
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CDS CAA 90 bp | ATGCTCTGCCCCTCCTCGCCCACCAGGCGCATGATGTTCCCAGGTTaGATGTCCCGATGGACAATGCCATTCTCCCGCAGGTGGTTCATG | + |
Preference number: 6 (lower is better) Translates to: MLCPSSPTRRMMFPG*MSRWTMPFSRRWFM Trigger: CATGAACCACCTGCGGGAGAATGGCATTGTCCATCGGGACATCAAACCTGGGAACATCATGCGCCTGGTGGGCGAGGAGGGGCAGAGCAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062108.10 ENSMUST00000161764.8 |
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CDS TCA 72 bp | CCTCACCTGAACCTCAGGAGGTCGCCGATAGCTGGCTaGGTTGAAGACCTTTACAGCAACCACCTCCCCGGA | + |
Preference number: 6 (lower is better) Translates to: PHLNLRRSPIAG*VEDLYSNHLPG Trigger: TCCGGGGAGGTGGTTGCTGTAAAGGTCTTCAACTCAGCCAGCTATCGGCGACCTCCTGAGGTTCAGGTGAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062108.10 ENSMUST00000159195.2 |
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CDS GCA 72 bp | CTCCCACTGGAGCAGTACTCCATGATTAGCACCTTCTaGCGGCTGCCTCCCGTTTCCTCCACTGCGAATAGC | + |
Preference number: 6 (lower is better) Translates to: LPLEQYSMISTF*RLPPVSSTANS Trigger: GCTATTCGCAGTGGAGGAAACGGGAGGCAGCCGGCAGAAGGTGCTAATCATGGAGTACTGCTCCAGTGGGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062108.10 ENSMUST00000159195.2 |
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CDS CCA 72 bp | CCTCCCCGGATTTCTTGTTTCGGGCCTTGTACACACTaGCAGTGGCCCCCTGCCCTAGCAGGTCATCAGTAT | + |
Preference number: 6 (lower is better) Translates to: PPRISCFGPCTH*QWPPALAGHQY Trigger: ATACTGATGACCTGCTAGGGCAGGGGGCCACTGCCAGTGTGTACAAGGCCCGAAACAAGAAATCCGGGGAGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000062108.10 ENSMUST00000159195.2 ENSMUST00000161764.8 |
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CDS CCA 72 bp | TTGATGTCCCGATGGACAATGCCATTCTCCCGCAGGTaGTTCATGCCAGCCACCACACAGCGCAGCACCACT | + |
Preference number: 6 (lower is better) Translates to: LMSRWTMPFSRR*FMPATTQRSTT Trigger: AGTGGTGCTGCGCTGTGTGGTGGCTGGCATGAACCACCTGCGGGAGAATGGCATTGTCCATCGGGACATCAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062108.10 ENSMUST00000161764.8 |
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CDS CCA 72 bp | AGCCTGGTTCTTAGCTCTGTGGCCTCCTTTCGTTCCTaGACGTCAGGCATCCCCGCTCCACTGCTGAACCTT | + |
Preference number: 6 (lower is better) Translates to: SLVLSSVASFRS*TSGIPAPLLNL Trigger: AAGGTTCAGCAGTGGAGCGGGGATGCCTGACGTCCAGGAACGAAAGGAGGCCACAGAGCTAAGAACCAGGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062108.10 ENSMUST00000161764.8 |
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CDS CAA 72 bp | GCTGGCTTCTCTGTGGTGATTCTGTACATGATCTCTTaGTTGCGCCGGGGCCCACCGAAGGGGATGAAGGGC | + |
Preference number: 6 (lower is better) Translates to: AGFSVVILYMIS*LRRGPPKGMKG Trigger: GCCCTTCATCCCCTTCGGTGGGCCCCGGCGCAACAAAGAGATCATGTACAGAATCACCACAGAGAAGCCAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000062108.10 ENSMUST00000161764.8 |
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CDS CCA 72 bp | CGGATTTCTTGTTTCGGGCCTTGTACACACTGGCAGTaGCCCCCTGCCCTAGCAGGTCATCAGTATGCCACA | + |
Preference number: 6 (lower is better) Translates to: RISCFGPCTHWQ*PPALAGHQYAT Trigger: TGTGGCATACTGATGACCTGCTAGGGCAGGGGGCCACTGCCAGTGTGTACAAGGCCCGAAACAAGAAATCCG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000062108.10 ENSMUST00000159195.2 ENSMUST00000161764.8 |
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CDS CAA 72 bp | GGCTTCTCTGTGGTGATTCTGTACATGATCTCTTTGTaGCGCCGGGGCCCACCGAAGGGGATGAAGGGCAGA | + |
Preference number: 6 (lower is better) Translates to: GFSVVILYMISL*RRGPPKGMKGR Trigger: TCTGCCCTTCATCCCCTTCGGTGGGCCCCGGCGCAACAAAGAGATCATGTACAGAATCACCACAGAGAAGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000062108.10 ENSMUST00000161764.8 |
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CDS CCA 72 bp | CACAAGGGTGACCCTCGAAGAGGTACTCCTGGTGTTTaGGGGTCACGTTGGTCTGCTCATATACAGCCTCCA | + |
Preference number: 6 (lower is better) Translates to: HKGDPRRGTPGV*GSRWSAHIQPP Trigger: TGGAGGCTGTATATGAGCAGACCAACGTGACCCCCAAACACCAGGAGTACCTCTTCGAGGGTCACCCTTGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062108.10 ENSMUST00000161764.8 |
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CDS CAA 90 bp | GGTCACCCCAATACTCCAGAGATCCACAGTCACACCAAATGCCTTTaGCTGGGGTTTGCGCAGCACTGCACGCTCATACATGTCAGGGTG | + |
Preference number: 6 (lower is better) Translates to: GHPNTPEIHSHTKCL*LGFAQHCTLIHVRV Trigger: CACCCTGACATGTATGAGCGTGCAGTGCTGCGCAAACCCCAGCAAAAGGCATTTGGTGTGACTGTGGATCTCTGGAGTATTGGGGTGACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000062108.10 ENSMUST00000161764.8 |
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CDS TCA 72 bp | GTTTCCTCCACTGCGAATAGCTTCACGATGTTCTGGTaGTTCAGCCTCCGCAGGACCTCAAACTCCCTCACC | + |
Preference number: 6 (lower is better) Translates to: VSSTANSFTMFW*FSLRRTSNSLT Trigger: GGTGAGGGAGTTTGAGGTCCTGCGGAGGCTGAATCACCAGAACATCGTGAAGCTATTCGCAGTGGAGGAAAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062108.10 ENSMUST00000159195.2 |
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CDS TCA 72 bp | GTTCGCTGCAGAATGTCACTGGTCTCCGCGAAGAACTaGTCAAAGCCCCAGCACTTATCCTCTTCCACCTCC | + |
Preference number: 6 (lower is better) Translates to: VRCRMSLVSAKN*SKPQHLSSSTS Trigger: GGAGGTGGAAGAGGATAAGTGCTGGGGCTTTGATCAGTTCTTCGCGGAGACCAGTGACATTCTGCAGCGAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062108.10 ENSMUST00000161764.8 |
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CDS GCA 72 bp | CACACCAAATGCCTTTTGCTGGGGTTTGCGCAGCACTaGACGCTCATACATGTCAGGGTGCAGGTATTCCTC | + |
Preference number: 6 (lower is better) Translates to: HTKCLLLGFAQH*TLIHVRVQVFL Trigger: GAGGAATACCTGCACCCTGACATGTATGAGCGTGCAGTGCTGCGCAAACCCCAGCAAAAGGCATTTGGTGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000062108.10 ENSMUST00000161764.8 |
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CDS CAA 72 bp | AGATCCACAGTCACACCAAATGCCTTTTGCTGGGGTTaGCGCAGCACTGCACGCTCATACATGTCAGGGTGC | + |
Preference number: 6 (lower is better) Translates to: RSTVTPNAFCWG*RSTARSYMSGC Trigger: GCACCCTGACATGTATGAGCGTGCAGTGCTGCGCAAACCCCAGCAAAAGGCATTTGGTGTGACTGTGGATCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000062108.10 ENSMUST00000161764.8 |
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CDS CCA 72 bp | CTCCAGAGATCCACAGTCACACCAAATGCCTTTTGCTaGGGTTTGCGCAGCACTGCACGCTCATACATGTCA | + |
Preference number: 6 (lower is better) Translates to: LQRSTVTPNAFC*GLRSTARSYMS Trigger: TGACATGTATGAGCGTGCAGTGCTGCGCAAACCCCAGCAAAAGGCATTTGGTGTGACTGTGGATCTCTGGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062108.10 ENSMUST00000161764.8 |
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CDS CAA 72 bp | CCCTCGAAGAGGTACTCCTGGTGTTTGGGGGTCACGTaGGTCTGCTCATATACAGCCTCCAAAAAGATGGCA | + |
Preference number: 6 (lower is better) Translates to: PSKRYSWCLGVT*VCSYTASKKMA Trigger: TGCCATCTTTTTGGAGGCTGTATATGAGCAGACCAACGTGACCCCCAAACACCAGGAGTACCTCTTCGAGGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000062108.10 ENSMUST00000161764.8 |
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CDS CAA 90 bp | ATACTCCAGAGATCCACAGTCACACCAAATGCCTTTTGCTGGGGTTaGCGCAGCACTGCACGCTCATACATGTCAGGGTGCAGGTATTCC | + |
Preference number: 6 (lower is better) Translates to: ILQRSTVTPNAFCWG*RSTARSYMSGCRYS Trigger: GGAATACCTGCACCCTGACATGTATGAGCGTGCAGTGCTGCGCAAACCCCAGCAAAAGGCATTTGGTGTGACTGTGGATCTCTGGAGTAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000062108.10 ENSMUST00000161764.8 |
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CDS GCA 72 bp | ATACTCCAGAGATCCACAGTCACACCAAATGCCTTTTaGTGGGGTTTGCGCAGCACTGCACGCTCATACATG | + |
Preference number: 6 (lower is better) Translates to: ILQRSTVTPNAF*WGLRSTARSYM Trigger: CATGTATGAGCGTGCAGTGCTGCGCAAACCCCAGCAAAAGGCATTTGGTGTGACTGTGGATCTCTGGAGTAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000062108.10 ENSMUST00000161764.8 |
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CDS CCA 72 bp | CCTCGAAGAGGTACTCCTGGTGTTTGGGGGTCACGTTaGTCTGCTCATATACAGCCTCCAAAAAGATGGCAA | + |
Preference number: 6 (lower is better) Translates to: PRRGTPGVWGSR*SAHIQPPKRWQ Trigger: TTGCCATCTTTTTGGAGGCTGTATATGAGCAGACCAACGTGACCCCCAAACACCAGGAGTACCTCTTCGAGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000062108.10 ENSMUST00000161764.8 |
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CDS GCA 72 bp | AAGAGGTACTCCTGGTGTTTGGGGGTCACGTTGGTCTaGTCATATACAGCCTCCAAAAAGATGGCAATCGTG | + |
Preference number: 6 (lower is better) Translates to: KRYSWCLGVTLV*SYTASKKMAIV Trigger: CACGATTGCCATCTTTTTGGAGGCTGTATATGAGCAGACCAACGTGACCCCCAAACACCAGGAGTACCTCTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000062108.10 ENSMUST00000161764.8 |
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CDS GCA 72 bp | TTGTGGGAACATTTAGACAGGATCTCTGAGAGAGTCTaGAGCCTGGTTCTTAGCTCTGTGGCCTCCTTTCGT | + |
Preference number: 6 (lower is better) Translates to: LWEHLDRISERV*SLVLSSVASFR Trigger: ACGAAAGGAGGCCACAGAGCTAAGAACCAGGCTGCAGACTCTCTCAGAGATCCTGTCTAAATGTTCCCACAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062108.10 ENSMUST00000161764.8 |
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CDS GCA 72 bp | TCAAAGGCCAATAGCTTCATATCATTACAAAGCTCCTaGATGTGGAAGACCAGGTCCTTCGGATCAGGGCCG | + |
Preference number: 6 (lower is better) Translates to: SKANSFISLQSS*MWKTRSFGSGP Trigger: CGGCCCTGATCCGAAGGACCTGGTCTTCCACATGCAGGAGCTTTGTAATGATATGAAGCTATTGGCCTTTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062108.10 ENSMUST00000161764.8 |
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CDS CAA 72 bp | AATACTCCAGAGATCCACAGTCACACCAAATGCCTTTaGCTGGGGTTTGCGCAGCACTGCACGCTCATACAT | + |
Preference number: 6 (lower is better) Translates to: NTPEIHSHTKCL*LGFAQHCTLIH Trigger: ATGTATGAGCGTGCAGTGCTGCGCAAACCCCAGCAAAAGGCATTTGGTGTGACTGTGGATCTCTGGAGTATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062108.10 ENSMUST00000161764.8 |
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CDS CAA 72 bp | GCCGATGGAACTCTATGTAACCGTTCGATGAGTCGGTaGTTGTCCTGGAGATCAAAGGCCAATAGCTTCATA | + |
Preference number: 6 (lower is better) Translates to: ADGTLCNRSMSR*LSWRSKANSFI Trigger: TATGAAGCTATTGGCCTTTGATCTCCAGGACAACAACCGACTCATCGAACGGTTACATAGAGTTCCATCGGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062108.10 ENSMUST00000161764.8 |
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CDS CAA 90 bp | TCTGGTGCCGATGGAACTCTATGTAACCGTTCGATGAGTCGGTTGTaGTCCTGGAGATCAAAGGCCAATAGCTTCATATCATTACAAAGC | + |
Preference number: 6 (lower is better) Translates to: SGADGTLCNRSMSRL*SWRSKANSFISLQS Trigger: GCTTTGTAATGATATGAAGCTATTGGCCTTTGATCTCCAGGACAACAACCGACTCATCGAACGGTTACATAGAGTTCCATCGGCACCAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062108.10 ENSMUST00000161764.8 |
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CDS CAA 90 bp | ACATCTGGTGCCGATGGAACTCTATGTAACCGTTCGATGAGTCGGTaGTTGTCCTGGAGATCAAAGGCCAATAGCTTCATATCATTACAA | + |
Preference number: 6 (lower is better) Translates to: TSGADGTLCNRSMSR*LSWRSKANSFISLQ Trigger: TTGTAATGATATGAAGCTATTGGCCTTTGATCTCCAGGACAACAACCGACTCATCGAACGGTTACATAGAGTTCCATCGGCACCAGATGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062108.10 ENSMUST00000161764.8 |
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CDS CAA 72 bp | GATGGAACTCTATGTAACCGTTCGATGAGTCGGTTGTaGTCCTGGAGATCAAAGGCCAATAGCTTCATATCA | + |
Preference number: 6 (lower is better) Translates to: DGTLCNRSMSRL*SWRSKANSFIS Trigger: TGATATGAAGCTATTGGCCTTTGATCTCCAGGACAACAACCGACTCATCGAACGGTTACATAGAGTTCCATC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062108.10 ENSMUST00000161764.8 |
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CDS CCA 72 bp | ACTCTATGTAACCGTTCGATGAGTCGGTTGTTGTCCTaGAGATCAAAGGCCAATAGCTTCATATCATTACAA | + |
Preference number: 6 (lower is better) Translates to: TLCNRSMSRLLS*RSKANSFISLQ Trigger: TTGTAATGATATGAAGCTATTGGCCTTTGATCTCCAGGACAACAACCGACTCATCGAACGGTTACATAGAGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062108.10 ENSMUST00000161764.8 |