Pregenerated sensors for IKBIP (Mus musculus)
Ensembl gene IDs: ENSMUSG00000019975Ensembl transcript IDs: ENSMUST00000020149.6, ENSMUST00000020150.10
Found 119 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TATGAGTGGCCTGCCTGTATGTGTCTGTGCACCGCGTGCACGCCATaGATGGTACTTGCAGGAGTCATAAGGCTGTGCTGGGTCTCCTGG | + |
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Preference number: 1 (lower is better) Translates to: YEWPACMCLCTACTP*MVLAGVIRLCWVSW Trigger: CCAGGAGACCCAGCACAGCCTTATGACTCCTGCAAGTACCATGCATGGCGTGCACGCGGTGCACAGACACATACAGGCAGGCCACTCATA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020149.6 |
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| 3UTR-3UTR GCA 90 bp | AACTCACTTTGTAGACCAGGCTGGCCCCGAACTCAGAAATACGCCTGCCTCTGCCTGGGATTAAAGGCGTaGACCACCACGCCCGGCAAG | + |
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Preference number: 2 (lower is better) Translates to: NSLCRPGWPRTQKYACLCLGLKA*TTTPGK Trigger: CTTGCCGGGCGTGGTGGTGCACGCCTTTAATCCCAG...GCAGAGGCAGGCGTATTTCTGAGTTCGGGGCCAGCCTGGTCTACAAAGTGAGTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020149.6 |
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| 3UTR-3UTR GCA 90 bp | AACTCACTTTGTAGACCAGGCTGGCCCCGAACTCAGAAATACGCCTGCCTCTGCATGTTACCAACTGGCTaGAAGAGCAGGAGACAGAAA | + |
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Preference number: 2 (lower is better) Translates to: NSLCRPGWPRTQKYACLCMLPTG*KSRRQK Trigger: TTTCTGTCTCCTGCTCTTGCAGCCAGTTGGTAACAT...GCAGAGGCAGGCGTATTTCTGAGTTCGGGGCCAGCCTGGTCTACAAAGTGAGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020149.6 |
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| 3UTR-3UTR CCA 90 bp | ACCCCTGAGACATCAAATTTCTTAGCAAAGGAATACACAGACACACATGTTCAACACAGGAGAGCCCCTTaGTTCTCCTGCAGGAAGGTT | + |
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Preference number: 2 (lower is better) Translates to: TPETSNFLAKEYTDTHVQHRRAP*FSCRKV Trigger: AACCTTCCTGCAGGAGAACCAAGGGGCTCTCCTGTG...TTGAACATGTGTGTCTGTGTATTCCTTTGCTAAGAAATTTGATGTCTCAGGGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020149.6 |
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| 3UTR-3UTR TCA 90 bp | TTATGTCAGTGTCGGGTATTAAACCCTGATCCTGGTCCTTGTGCTTACACAGCAAAATGTAGGAGTGAATaGTTCCCACTTGGTAGTGCA | + |
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Preference number: 2 (lower is better) Translates to: LCQCRVLNPDPGPCAYTAKCRSE*FPLGSA Trigger: TGCACTACCAAGTGGGAATCATTCACTCCTACATTT...TGCTGTGTAAGCACAAGGACCAGGATCAGGGTTTAATACCCGACACTGACATAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020149.6 |
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| 3UTR-3UTR TCA 90 bp | TTATGTCAGTGTCGGGTATTAAACCCTGATCCTGGTCCTTGTGCTTACACAGCAAGAAAAGGCTATAAATaGGAACACAATAGGGACACG | + |
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Preference number: 2 (lower is better) Translates to: LCQCRVLNPDPGPCAYTARKGYK*EHNRDT Trigger: CGTGTCCCTATTGTGTTCTCATTTATAGCCTTTTCT...TGCTGTGTAAGCACAAGGACCAGGATCAGGGTTTAATACCCGACACTGACATAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020149.6 |
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| 3UTR-3UTR GCA 90 bp | TGTCACACAGTTCAAACTTTAGAAATAAAAGTCCAGGTTCACAAAGAGACTTCAGCCCCTTGGTTCTCCTaGAGGAAGGTTACCTTCTAT | + |
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Preference number: 2 (lower is better) Translates to: CHTVQTLEIKVQVHKETSAPWFS*RKVTFY Trigger: ATAGAAGGTAACCTTCCTGCAGGAGAACCAAGGGGC...TGAAGTCTCTTTGTGAACCTGGACTTTTATTTCTAAAGTTTGAACTGTGTGACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020149.6 |
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| 3UTR-3UTR CCA 90 bp | GTGTCACACAGTTCAAACTTTAGAAATAAAAGTCCAGGTTCACAAAGAGACTTCAGAGCCCCAAAAACCTaGGAGAGGAAGGTATGTTAC | + |
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Preference number: 2 (lower is better) Translates to: VSHSSNFRNKSPGSQRDFRAPKT*ERKVCY Trigger: GTAACATACCTTCCTCTCCCAGGTTTTTGGGGCTCT...GAAGTCTCTTTGTGAACCTGGACTTTTATTTCTAAAGTTTGAACTGTGTGACAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000020149.6 |
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| 3UTR-3UTR GCA 90 bp | ACCCCTGAGACATCAAATTTCTTAGCAAAGGAATACACAGACACACATGTTCAAAAAAGTTTGATTAGATaGATACTCCATATGGCGCAC | + |
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Preference number: 2 (lower is better) Translates to: TPETSNFLAKEYTDTHVQKSLIR*ILHMAH Trigger: GTGCGCCATATGGAGTATGCATCTAATCAAACTTTT...TTGAACATGTGTGTCTGTGTATTCCTTTGCTAAGAAATTTGATGTCTCAGGGGT 38% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000020149.6 |
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| 3UTR GCA 72 bp | TGTAGACCAGGCTGGCCCCGAACTCAGAAATACGCCTaGCTCTGCCTCCCAAGTGCTGGGATTAAAGGCGTG | + |
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Preference number: 3 (lower is better) Translates to: CRPGWPRTQKYA*LCLPSAGIKGV Trigger: CACGCCTTTAATCCCAGCACTTGGGAGGCAGAGGCAGGCGTATTTCTGAGTTCGGGGCCAGCCTGGTCTACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020149.6 |
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| 3UTR GCA 72 bp | CCTGCCTGTATGTGTCTGTGCACCGCGTGCACGCCATaGATGGTACTTGCAGGAGTCATAAGGCTGTGCTGG | + |
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Preference number: 3 (lower is better) Translates to: PACMCLCTACTP*MVLAGVIRLCW Trigger: CCAGCACAGCCTTATGACTCCTGCAAGTACCATGCATGGCGTGCACGCGGTGCACAGACACATACAGGCAGG 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020149.6 |
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| 3UTR TCA 72 bp | TGCTGGGTCTCCTGGGAGCTGAGTTACAGATGGTTGTaGGCCATCACGTGGGCACTGGGAATCAAACCCAAG | + |
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Preference number: 3 (lower is better) Translates to: CWVSWELSYRWL*AITWALGIKPK Trigger: CTTGGGTTTGATTCCCAGTGCCCACGTGATGGCTCACAACCATCTGTAACTCAGCTCCCAGGAGACCCAGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020149.6 |
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| 3UTR GCA 72 bp | ACGCCATGCATGGTACTTGCAGGAGTCATAAGGCTGTaGTGGGTCTCCTGGGAGCTGAGTTACAGATGGTTG | + |
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Preference number: 3 (lower is better) Translates to: TPCMVLAGVIRL*WVSWELSYRWL Trigger: CAACCATCTGTAACTCAGCTCCCAGGAGACCCAGCACAGCCTTATGACTCCTGCAAGTACCATGCATGGCGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020149.6 |
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| 3UTR GCA 72 bp | TTGAACTTAGAGAGCCGACTGCCTTTACCTCTGGAGTaGTGGTATCAAAGCTGTGCGCCACCGTACTTAGCT | + |
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Preference number: 3 (lower is better) Translates to: LNLESRLPLPLE*WYQSCAPPYLA Trigger: AGCTAAGTACGGTGGCGCACAGCTTTGATACCAGCACTCCAGAGGTAAAGGCAGTCGGCTCTCTAAGTTCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020149.6 |
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| 3UTR GCA 72 bp | GTGGCACTACCTCACAGGAGAGCCCCTTGGTTCTCCTaGAGGAAGGTTACCTTCTATTTTACATACACTTCC | + |
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Preference number: 3 (lower is better) Translates to: VALPHRRAPWFS*RKVTFYFTYTS Trigger: GGAAGTGTATGTAAAATAGAAGGTAACCTTCCTGCAGGAGAACCAAGGGGCTCTCCTGTGAGGTAGTGCCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020149.6 |
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| 3UTR GCA 72 bp | AAAAACCTGGGAGAGGAAGGTATGTTACCAACTGGCTaGAAGAGCAGGAGACAGAAAAGTTGTGAGAAACAG | + |
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Preference number: 3 (lower is better) Translates to: KNLGEEGMLPTG*KSRRQKSCEKQ Trigger: CTGTTTCTCACAACTTTTCTGTCTCCTGCTCTTGCAGCCAGTTGGTAACATACCTTCCTCTCCCAGGTTTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020149.6 |
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| 3UTR-3UTR CAA 90 bp | TTATGTCAGTGTCGGGTATTAAACCCTGATCCTGGTCCTTGTGCTTACACAGCACACAGCTTAGAACCTTaGCAAAAGGGAGGATACTTT | + |
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Preference number: 3 (lower is better) Translates to: LCQCRVLNPDPGPCAYTAHSLEP*QKGGYF Trigger: AAAGTATCCTCCCTTTTGCAAAGGTTCTAAGCTGTG...TGCTGTGTAAGCACAAGGACCAGGATCAGGGTTTAATACCCGACACTGACATAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020149.6 |
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| 3UTR CCA 72 bp | CAACAATATGAAGTCCTGTGCCATGATTTAGACCTATaGTCCCTGTTACTTGAAACGCAGGAGCAGGAAGAT | + |
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Preference number: 3 (lower is better) Translates to: QQYEVLCHDLDL*SLLLETQEQED Trigger: ATCTTCCTGCTCCTGCGTTTCAAGTAACAGGGACCATAGGTCTAAATCATGGCACAGGACTTCATATTGTTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020149.6 |
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| 3UTR TCA 72 bp | AAGTCCTCTGCAAGAACAACCAGTGCTCTTAACCCCTaGGACATCAAATTTCTTAGCAAAGGAATACACAGA | + |
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Preference number: 3 (lower is better) Translates to: KSSARTTSALNP*DIKFLSKGIHR Trigger: TCTGTGTATTCCTTTGCTAAGAAATTTGATGTCTCAGGGGTTAAGAGCACTGGTTGTTCTTGCAGAGGACTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020149.6 |
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| 3UTR-3UTR CAA 90 bp | ACCCCTGAGACATCAAATTTCTTAGCAAAGGAATACACAGACACACATGTTCAACAAGCCTCTCATTTATaGAACTATCTCCTTGTCCTA | + |
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Preference number: 3 (lower is better) Translates to: TPETSNFLAKEYTDTHVQQASHL*NYLLVL Trigger: TAGGACAAGGAGATAGTTCAATAAATGAGAGGCTTG...TTGAACATGTGTGTCTGTGTATTCCTTTGCTAAGAAATTTGATGTCTCAGGGGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020149.6 |
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| 3UTR GCA 72 bp | AGAGATACGAAAGTGTGGATTATAATACTGGGAATTTaGCATAAAGCACAACAATATGAAGTCCTGTGCCAT | + |
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Preference number: 3 (lower is better) Translates to: RDTKVWIIILGI*HKAQQYEVLCH Trigger: ATGGCACAGGACTTCATATTGTTGTGCTTTATGGCAAATTCCCAGTATTATAATCCACACTTTCGTATCTCT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020149.6 |
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| CDS-3UTR TCA 90 bp | ATAACGTGGCACTACCTCACAGGAGAGCCCCTTGGTTCTCCTGCAGGAAGGTTACCAGAGACAGCAGGCTaGGCCCAGTGCGGGGGTCCG | + |
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Preference number: 4 (lower is better) Translates to: ITWHYLTGEPLGSPAGRLPETAG*AQCGGP Trigger: CGGACCCCCGCACTGGGCTCAGCCTGCTGTCTCTGG...TAACCTTCCTGCAGGAGAACCAAGGGGCTCTCCTGTGAGGTAGTGCCACGTTAT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020149.6 |
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| CDS-3UTR CCA 90 bp | TTATGTCAGTGTCGGGTATTAAACCCTGATCCTGGTCCTTGTGCTTACACAGCACAGGAGCAGCCACTTTaGGCCCCGGCTTCTTTCGGC | + |
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Preference number: 4 (lower is better) Translates to: LCQCRVLNPDPGPCAYTAQEQPL*APASFG Trigger: GCCGAAAGAAGCCGGGGCCCAAAGTGGCTGCTCCTG...TGCTGTGTAAGCACAAGGACCAGGATCAGGGTTTAATACCCGACACTGACATAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020149.6 |
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| CDS-3UTR TCA 90 bp | AACTCACTTTGTAGACCAGGCTGGCCCCGAACTCAGAAATACGCCTGCCTCTGCCCTTCACTTCTGATTTaGAGACGGCTGTGTCATCGA | + |
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Preference number: 4 (lower is better) Translates to: NSLCRPGWPRTQKYACLCPSLLI*RRLCHR Trigger: TCGATGACACAGCCGTCTTCAAATCAGAAGTGAAGG...GCAGAGGCAGGCGTATTTCTGAGTTCGGGGCCAGCCTGGTCTACAAAGTGAGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020149.6 |
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| CDS-3UTR CCA 90 bp | TTCATAACGTGGCACTACCTCACAGGAGAGCCCCTTGGTTCTCCTGCAGGAAGGGGACAGCATTTTCTATaGTTGGCAAGTGTGCCTTGC | + |
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Preference number: 4 (lower is better) Translates to: FITWHYLTGEPLGSPAGRGQHFL*LASVPC Trigger: GCAAGGCACACTTGCCAACCATAGAAAATGCTGTCC...CCTTCCTGCAGGAGAACCAAGGGGCTCTCCTGTGAGGTAGTGCCACGTTATGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000020149.6 |
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| CDS-3UTR TCA 90 bp | ATAACGTGGCACTACCTCACAGGAGAGCCCCTTGGTTCTCCTGCAGGAAGGTTATGTATCCTTCACTTCTaGTTTGAAGACGGCTGTGTC | + |
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Preference number: 4 (lower is better) Translates to: ITWHYLTGEPLGSPAGRLCILHF*FEDGCV Trigger: GACACAGCCGTCTTCAAATCAGAAGTGAAGGATACA...TAACCTTCCTGCAGGAGAACCAAGGGGCTCTCCTGTGAGGTAGTGCCACGTTAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020149.6 |
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| CDS-3UTR CCA 90 bp | AACTCACTTTGTAGACCAGGCTGGCCCCGAACTCAGAAATACGCCTGCCTCTGCACTCTGAGAACCGAGTaGACAGCATTTTCTATGGTT | + |
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Preference number: 4 (lower is better) Translates to: NSLCRPGWPRTQKYACLCTLRTE*TAFSMV Trigger: AACCATAGAAAATGCTGTCCACTCGGTTCTCAGAGT...GCAGAGGCAGGCGTATTTCTGAGTTCGGGGCCAGCCTGGTCTACAAAGTGAGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020149.6 |
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| CDS-3UTR TCA 90 bp | CCAAGTCCTCTGCAAGAACAACCAGTGCTCTTAACCCCTGAGACATCAAATTTCGCCTGCTCACTGTTCTaGTGTTTCGCAGTGTGCTGT | + |
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Preference number: 4 (lower is better) Translates to: PSPLQEQPVLLTPETSNFACSLF*CFAVCC Trigger: ACAGCACACTGCGAAACATCAGAACAGTGAGCAGGC...GAAATTTGATGTCTCAGGGGTTAAGAGCACTGGTTGTTCTTGCAGAGGACTTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020149.6 |
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| CDS-3UTR TCA 90 bp | TATGAAGTCCTGTGCCATGATTTAGACCTATGGTCCCTGTTACTTGAAACGCAGTGTCGTCCTCCATGTTaGACATCTGCATCGTCAGCT | + |
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Preference number: 4 (lower is better) Translates to: YEVLCHDLDLWSLLLETQCRPPC*TSASSA Trigger: AGCTGACGATGCAGATGTTCAACATGGAGGACGACA...CTGCGTTTCAAGTAACAGGGACCATAGGTCTAAATCATGGCACAGGACTTCATA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020149.6 |
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| CDS-3UTR GCA 90 bp | TTCATAACGTGGCACTACCTCACAGGAGAGCCCCTTGGTTCTCCTGCAGGAAGGTTCTCATTAAGGTTTTaGATCTTTTGTGTGAGCATC | + |
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Preference number: 4 (lower is better) Translates to: FITWHYLTGEPLGSPAGRFSLRF*IFCVSI Trigger: GATGCTCACACAAAAGATGCAAAACCTTAATGAGAA...CCTTCCTGCAGGAGAACCAAGGGGCTCTCCTGTGAGGTAGTGCCACGTTATGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000020149.6 |
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| CDS-3UTR GCA 90 bp | TTATGTCAGTGTCGGGTATTAAACCCTGATCCTGGTCCTTGTGCTTACACAGCATCCATGTTGAACATCTaGATCGTCAGCTCCTCCATC | + |
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Preference number: 4 (lower is better) Translates to: LCQCRVLNPDPGPCAYTASMLNI*IVSSSI Trigger: GATGGAGGAGCTGACGATGCAGATGTTCAACATGGA...TGCTGTGTAAGCACAAGGACCAGGATCAGGGTTTAATACCCGACACTGACATAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020149.6 |
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| CDS-3UTR GCA 90 bp | TTATGTCAGTGTCGGGTATTAAACCCTGATCCTGGTCCTTGTGCTTACACAGCATTGGCAAGTGTGCCTTaGACTCTTCTACTTTGGGTT | + |
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Preference number: 4 (lower is better) Translates to: LCQCRVLNPDPGPCAYTALASVP*TLLLWV Trigger: AACCCAAAGTAGAAGAGTGCAAGGCACACTTGCCAA...TGCTGTGTAAGCACAAGGACCAGGATCAGGGTTTAATACCCGACACTGACATAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020149.6 |
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| CDS-3UTR CCA 90 bp | TTATGTCAGTGTCGGGTATTAAACCCTGATCCTGGTCCTTGTGCTTACACAGCACTTTGGGTTCGTAGCTaGAGAGTTTGTTGGTCAGAT | + |
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Preference number: 4 (lower is better) Translates to: LCQCRVLNPDPGPCAYTALWVRS*RVCWSD Trigger: ATCTGACCAACAAACTCTCCAGCTACGAACCCAAAG...TGCTGTGTAAGCACAAGGACCAGGATCAGGGTTTAATACCCGACACTGACATAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020149.6 |
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| CDS-3UTR CCA 90 bp | TTATGTCAGTGTCGGGTATTAAACCCTGATCCTGGTCCTTGTGCTTACACAGCATGCACTCTTCTACTTTaGGTTCGTAGCTGGAGAGTT | + |
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Preference number: 4 (lower is better) Translates to: LCQCRVLNPDPGPCAYTACTLLL*VRSWRV Trigger: AACTCTCCAGCTACGAACCCAAAGTAGAAGAGTGCA...TGCTGTGTAAGCACAAGGACCAGGATCAGGGTTTAATACCCGACACTGACATAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020149.6 |
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| CDS-3UTR CCA 90 bp | TTATGTCAGTGTCGGGTATTAAACCCTGATCCTGGTCCTTGTGCTTACACAGCAAGCATTTTCTATGGTTaGCAAGTGTGCCTTGCACTC | + |
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Preference number: 4 (lower is better) Translates to: LCQCRVLNPDPGPCAYTASIFYG*QVCLAL Trigger: GAGTGCAAGGCACACTTGCCAACCATAGAAAATGCT...TGCTGTGTAAGCACAAGGACCAGGATCAGGGTTTAATACCCGACACTGACATAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020149.6 |
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| CDS-3UTR CCA 90 bp | TATGAAGTCCTGTGCCATGATTTAGACCTATGGTCCCTGTTACTTGAAACGCAGAAGCTGTTGTCATACTaGATCCCCTCCAGGGTTTTC | + |
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Preference number: 4 (lower is better) Translates to: YEVLCHDLDLWSLLLETQKLLSY*IPSRVF Trigger: GAAAACCCTGGAGGGGATCCAGTATGACAACAGCTT...CTGCGTTTCAAGTAACAGGGACCATAGGTCTAAATCATGGCACAGGACTTCATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020149.6 |
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| CDS-3UTR TCA 90 bp | CCAAGTCCTCTGCAAGAACAACCAGTGCTCTTAACCCCTGAGACATCAAATTTCAACTTTTCTGATTGTTaGAATACAAGCCAGGCCAGG | + |
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Preference number: 4 (lower is better) Translates to: PSPLQEQPVLLTPETSNFNFSDC*NTSQAR Trigger: CCTGGCCTGGCTTGTATTTCAACAATCAGAAAAGTT...GAAATTTGATGTCTCAGGGGTTAAGAGCACTGGTTGTTCTTGCAGAGGACTTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020149.6 |
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| CDS-3UTR TCA 90 bp | ACCCCTGAGACATCAAATTTCTTAGCAAAGGAATACACAGACACACATGTTCAAGATCCTGAGAGACTCTaGGAACCGAGTGGACAGCAT | + |
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Preference number: 4 (lower is better) Translates to: TPETSNFLAKEYTDTHVQDPERL*EPSGQH Trigger: ATGCTGTCCACTCGGTTCTCAGAGTCTCTCAGGATC...TTGAACATGTGTGTCTGTGTATTCCTTTGCTAAGAAATTTGATGTCTCAGGGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020149.6 |
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| CDS-3UTR GCA 90 bp | TTATGTCAGTGTCGGGTATTAAACCCTGATCCTGGTCCTTGTGCTTACACAGCAGATGATGTAGCTTCCTaGAGGGTATTTTCAGTAGAC | + |
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Preference number: 4 (lower is better) Translates to: LCQCRVLNPDPGPCAYTADDVAS*RVFSVD Trigger: GTCTACTGAAAATACCCTGCAGGAAGCTACATCATC...TGCTGTGTAAGCACAAGGACCAGGATCAGGGTTTAATACCCGACACTGACATAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020149.6 |
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| CDS-3UTR GCA 90 bp | TATGAAGTCCTGTGCCATGATTTAGACCTATGGTCCCTGTTACTTGAAACGCAGAGATCTTCCTCTTCTTaGCTGCTCACTGTTCTGATG | + |
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Preference number: 4 (lower is better) Translates to: YEVLCHDLDLWSLLLETQRSSSS*LLTVLM Trigger: CATCAGAACAGTGAGCAGGCAAGAAGAGGAAGATCT...CTGCGTTTCAAGTAACAGGGACCATAGGTCTAAATCATGGCACAGGACTTCATA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020149.6 |
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| CDS-3UTR GCA 90 bp | CCAAGTCCTCTGCAAGAACAACCAGTGCTCTTAACCCCTGAGACATCAAATTTCTATGGTTGGCAAGTGTaGCTTGCACTCTTCTACTTT | + |
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Preference number: 4 (lower is better) Translates to: PSPLQEQPVLLTPETSNFYGWQV*LALFYF Trigger: AAAGTAGAAGAGTGCAAGGCACACTTGCCAACCATA...GAAATTTGATGTCTCAGGGGTTAAGAGCACTGGTTGTTCTTGCAGAGGACTTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020149.6 |
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| CDS-3UTR GCA 90 bp | TGTCACACAGTTCAAACTTTAGAAATAAAAGTCCAGGTTCACAAAGAGACTTCAGGCCCTGAAACTCGCTaGTCTCTGTTTGCAGTAACC | + |
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Preference number: 4 (lower is better) Translates to: CHTVQTLEIKVQVHKETSGPETR*SLFAVT Trigger: GGTTACTGCAAACAGAGAGCAGCGAGTTTCAGGGCC...TGAAGTCTCTTTGTGAACCTGGACTTTTATTTCTAAAGTTTGAACTGTGTGACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020149.6 |
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| CDS-3UTR TCA 90 bp | TATGAAGTCCTGTGCCATGATTTAGACCTATGGTCCCTGTTACTTGAAACGCAGCTTCGCAAACTTTTCTaGTTGTTGAAATACAAGCCA | + |
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Preference number: 4 (lower is better) Translates to: YEVLCHDLDLWSLLLETQLRKLF*LLKYKP Trigger: TGGCTTGTATTTCAACAATCAGAAAAGTTTGCGAAG...CTGCGTTTCAAGTAACAGGGACCATAGGTCTAAATCATGGCACAGGACTTCATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020149.6 |
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| CDS-3UTR TCA 90 bp | AAGTCCAGGTTCACAAAGAGACTTCATAAACTCATACTTCAAAACATCACCAGTTTTTCTGCATCTCCATaGTCTCAGACACAGCCCTCA | + |
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Preference number: 4 (lower is better) Translates to: KSRFTKRLHKLILQNITSFSASP*SQTQPS Trigger: TGAGGGCTGTGTCTGAGATCATGGAGATGCAGAAAA...ACTGGTGATGTTTTGAAGTATGAGTTTATGAAGTCTCTTTGTGAACCTGGACTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020149.6 |
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| CDS-3UTR GCA 90 bp | GAACAACCAGTGCTCTTAACCCCTGAGACATCAAATTTCTTAGCAAAGGAATACGTCATCGATCATTTCTaGCAGTGTTCTCTTCCAGAA | + |
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Preference number: 4 (lower is better) Translates to: EQPVLLTPETSNFLAKEYVIDHF*QCSLPE Trigger: TTCTGGAAGAGAACACTGGCAGAAATGATCGATGAC...GTATTCCTTTGCTAAGAAATTTGATGTCTCAGGGGTTAAGAGCACTGGTTGTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020149.6 |
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| CDS-3UTR TCA 90 bp | ACCCCTGAGACATCAAATTTCTTAGCAAAGGAATACACAGACACACATGTTCAATGCTGGAAATTAAACTaGTTTTACTCTGGAGGCCCT | + |
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Preference number: 4 (lower is better) Translates to: TPETSNFLAKEYTDTHVQCWKLN*FYSGGP Trigger: AGGGCCTCCAGAGTAAAATCAGTTTAATTTCCAGCA...TTGAACATGTGTGTCTGTGTATTCCTTTGCTAAGAAATTTGATGTCTCAGGGGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020149.6 |
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| CDS-3UTR TCA 90 bp | GAGGGTCACAGTGAAATGGTAAGAGGTTTTAATATTTGCTACAGATTATCTGTCCATCAAAGATATGGATaGTGTAGCTTCCTGCAGGGT | + |
|
Preference number: 4 (lower is better) Translates to: EGHSEMVRGFNICYRLSVHQRYG*CSFLQG Trigger: ACCCTGCAGGAAGCTACATCATCCATATCTTTGATG...GACAGATAATCTGTAGCAAATATTAAAACCTCTTACCATTTCACTGTGACCCTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020149.6 |
||
| CDS-3UTR CCA 90 bp | TGTCACACAGTTCAAACTTTAGAAATAAAAGTCCAGGTTCACAAAGAGACTTCAACTTCCTGTTCAAATTaGGTCATCAAAGATATGGAT | + |
|
Preference number: 4 (lower is better) Translates to: CHTVQTLEIKVQVHKETSTSCSN*VIKDMD Trigger: ATCCATATCTTTGATGACCCAATTTGAACAGGAAGT...TGAAGTCTCTTTGTGAACCTGGACTTTTATTTCTAAAGTTTGAACTGTGTGACA 34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020149.6 |
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| CDS GCA 90 bp | AGCCAGCCTCTGTGCGACCGAGTCAATTCTTTTCGCATTTTCGCTTaGCGTCTTTCGGAGTGCCGATGTTCGGTCGATGCTGCTCGAGAG | + |
|
Preference number: 5 (lower is better) Translates to: SQPLCDRVNSFRIFA*RLSECRCSVDAARE Trigger: CTCTCGAGCAGCATCGACCGAACATCGGCACTCCGAAAGACGGCAAGCGAAAATGCGAAAAGAATTGACTCGGTCGCACAGAGGCTGGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020150.10 |
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| CDS GCA 90 bp | ATCTCAGACACAGCCCTCAGCATGTCGTCCTCCATGTTGAACATCTaGATCGTCAGCTCCTCCATCTTCCTTTCTGTCCCTATCAGATCC | + |
|
Preference number: 5 (lower is better) Translates to: ISDTALSMSSSMLNI*IVSSSIFLSVPIRS Trigger: GGATCTGATAGGGACAGAAAGGAAGATGGAGGAGCTGACGATGCAGATGTTCAACATGGAGGACGACATGCTGAGGGCTGTGTCTGAGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020149.6 |
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| CDS-3UTR CAA 90 bp | ATAACGTGGCACTACCTCACAGGAGAGCCCCTTGGTTCTCCTGCAGGAAGGTTAATCACGTATGGATCTTaGGAGGCCAGATACTTCCTG | + |
|
Preference number: 5 (lower is better) Translates to: ITWHYLTGEPLGSPAGRLITYGS*EARYFL Trigger: CAGGAAGTATCTGGCCTCCAAAGATCCATACGTGAT...TAACCTTCCTGCAGGAGAACCAAGGGGCTCTCCTGTGAGGTAGTGCCACGTTAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020149.6 |
||
| CDS-3UTR CAA 90 bp | ATAACGTGGCACTACCTCACAGGAGAGCCCCTTGGTTCTCCTGCAGGAAGGTTATCCTTCACTTCTGATTaGAAGACGGCTGTGTCATCG | + |
|
Preference number: 5 (lower is better) Translates to: ITWHYLTGEPLGSPAGRLSFTSD*KTAVSS Trigger: CGATGACACAGCCGTCTTCAAATCAGAAGTGAAGGA...TAACCTTCCTGCAGGAGAACCAAGGGGCTCTCCTGTGAGGTAGTGCCACGTTAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020149.6 |
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| CDS-3UTR CAA 90 bp | AACTCACTTTGTAGACCAGGCTGGCCCCGAACTCAGAAATACGCCTGCCTCTGCAAGATCTTCCTCTTCTaGCCTGCTCACTGTTCTGAT | + |
|
Preference number: 5 (lower is better) Translates to: NSLCRPGWPRTQKYACLCKIFLF*PAHCSD Trigger: ATCAGAACAGTGAGCAGGCAAGAAGAGGAAGATCTT...GCAGAGGCAGGCGTATTTCTGAGTTCGGGGCCAGCCTGGTCTACAAAGTGAGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020149.6 |
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| CDS TCA 90 bp | GCTCCTCCATCTTCCTTTCTGTCCCTATCAGATCCTGAGAGACTCTaGGAACCGAGTGGACAGCATTTTCTATGGTTGGCAAGTGTGCCT | + |
|
Preference number: 5 (lower is better) Translates to: APPSSFLSLSDPERL*EPSGQHFLWLASVP Trigger: AGGCACACTTGCCAACCATAGAAAATGCTGTCCACTCGGTTCTCAGAGTCTCTCAGGATCTGATAGGGACAGAAAGGAAGATGGAGGAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020149.6 |
||
| CDS TCA 90 bp | TGCATCGTCAGCTCCTCCATCTTCCTTTCTGTCCCTATCAGATCCTaGGAGACTCTGAGAACCGAGTGGACAGCATTTTCTATGGTTGGC | + |
|
Preference number: 5 (lower is better) Translates to: CIVSSSIFLSVPIRS*ETLRTEWTAFSMVG Trigger: GCCAACCATAGAAAATGCTGTCCACTCGGTTCTCAGAGTCTCTCAGGATCTGATAGGGACAGAAAGGAAGATGGAGGAGCTGACGATGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020149.6 |
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| CDS GCA 90 bp | GACCGAGTCAATTCTTTTCGCATTTTCGCTTGCCGTCTTTCGGAGTaGCGATGTTCGGTCGATGCTGCTCGAGAGGAGATCACCTATATT | + |
|
Preference number: 5 (lower is better) Translates to: DRVNSFRIFACRLSE*RCSVDAAREEITYI Trigger: AATATAGGTGATCTCCTCTCGAGCAGCATCGACCGAACATCGGCACTCCGAAAGACGGCAAGCGAAAATGCGAAAAGAATTGACTCGGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020150.10 |
||
| CDS CCA 90 bp | CTTTCCAAGCTTAAAAACCTATCTGTGTGCTCATCGAAATCGCCCTaGAGCTCAGCCAGCCTCTGTGCGACCGAGTCAATTCTTTTCGCA | + |
|
Preference number: 5 (lower is better) Translates to: LSKLKNLSVCSSKSP*SSASLCATESILFA Trigger: TGCGAAAAGAATTGACTCGGTCGCACAGAGGCTGGCTGAGCTCCAGGGCGATTTCGATGAGCACACAGATAGGTTTTTAAGCTTGGAAAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020150.10 |
||
| CDS GCA 90 bp | TCAGAGCTAAGCTGGGCCTCGACTCGTAGAAGATCTTCCTCTTCTTaGCTGCTCACTGTTCTGATGTTTCGCAGTGTGCTGTCTTCTAAA | + |
|
Preference number: 5 (lower is better) Translates to: SELSWASTRRRSSSS*LLTVLMFRSVLSSK Trigger: TTTAGAAGACAGCACACTGCGAAACATCAGAACAGTGAGCAGGCAAGAAGAGGAAGATCTTCTACGAGTCGAGGCCCAGCTTAGCTCTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020149.6 |
||
| CDS-3UTR CAA 90 bp | AACTCACTTTGTAGACCAGGCTGGCCCCGAACTCAGAAATACGCCTGCCTCTGCGAGCGATTTTATTTCTaGATCCGCGGAGTTAATCTT | + |
|
Preference number: 5 (lower is better) Translates to: NSLCRPGWPRTQKYACLCERFYF*IRGVNL Trigger: AAGATTAACTCCGCGGATCAAGAAATAAAATCGCTC...GCAGAGGCAGGCGTATTTCTGAGTTCGGGGCCAGCCTGGTCTACAAAGTGAGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020149.6 |
||
| CDS CCA 90 bp | CAGTGGTTCCAAACGCGAGAAGTCCTTCTTCAGATTAGAGACCTTTaGCTTCAGATCGTTTGCAAAGCTCACTGCCTTCAGAACTTTCGC | + |
|
Preference number: 5 (lower is better) Translates to: QWFQTREVLLQIRDL*LQIVCKAHCLQNFR Trigger: GCGAAAGTTCTGAAGGCAGTGAGCTTTGCAAACGATCTGAAGCCAAAGGTCTCTAATCTGAAGAAGGACTTCTCGCGTTTGGAACCACTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020150.10 |
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| CDS-3UTR CAA 90 bp | GAGGGTCACAGTGAAATGGTAAGAGGTTTTAATATTTGCTACAGATTATCTGTCTCAGGAGCAGCCACTTaGGGCCCCGGCTTCTTTCGG | + |
|
Preference number: 5 (lower is better) Translates to: EGHSEMVRGFNICYRLSVSGAAT*GPGFFR Trigger: CCGAAAGAAGCCGGGGCCCAAAGTGGCTGCTCCTGA...GACAGATAATCTGTAGCAAATATTAAAACCTCTTACCATTTCACTGTGACCCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020149.6 |
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| CDS-3UTR CAA 90 bp | AACTCACTTTGTAGACCAGGCTGGCCCCGAACTCAGAAATACGCCTGCCTCTGCTCAGTAGACTCAAGCTaGCTGGAAATTAAACTGATT | + |
|
Preference number: 5 (lower is better) Translates to: NSLCRPGWPRTQKYACLCSVDSS*LEIKLI Trigger: AATCAGTTTAATTTCCAGCAAGCTTGAGTCTACTGA...GCAGAGGCAGGCGTATTTCTGAGTTCGGGGCCAGCCTGGTCTACAAAGTGAGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020149.6 |
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| CDS-3UTR CAA 90 bp | TTCATAACGTGGCACTACCTCACAGGAGAGCCCCTTGGTTCTCCTGCAGGAAGGTACTTCCTGTTCAAATaGGGTCATCAAAGATATGGA | + |
|
Preference number: 5 (lower is better) Translates to: FITWHYLTGEPLGSPAGRYFLFK*GHQRYG Trigger: TCCATATCTTTGATGACCCAATTTGAACAGGAAGTA...CCTTCCTGCAGGAGAACCAAGGGGCTCTCCTGTGAGGTAGTGCCACGTTATGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020149.6 |
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| CDS TCA 90 bp | GTTCCACGAGAGCTTCACATTCCTGGTACTTGCTGGAAATTAAACTaGTTTTACTCTGGAGGCCCTGAAACTCGCTGCTCTCTGTTTGCA | + |
|
Preference number: 5 (lower is better) Translates to: VPRELHIPGTCWKLN*FYSGGPETRCSLFA Trigger: TGCAAACAGAGAGCAGCGAGTTTCAGGGCCTCCAGAGTAAAATCAGTTTAATTTCCAGCAAGTACCAGGAATGTGAAGCTCTCGTGGAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020150.10 |
||
| CDS GCA 90 bp | CTGGAGAGTTTGTTGGTCAGATCTTCGTCTCTGGCTAGGAGCGTGTaGTGTTCTTCTTCTAGCTTCTTAACTGCTTTGGTATCAGAGCTA | + |
|
Preference number: 5 (lower is better) Translates to: LESLLVRSSSLARSV*CSSSSFLTALVSEL Trigger: TAGCTCTGATACCAAAGCAGTTAAGAAGCTAGAAGAAGAACAGCACACGCTCCTAGCCAGAGACGAAGATCTGACCAACAAACTCTCCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020149.6 |
||
| CDS GCA 90 bp | CGAGAAGTCCTTCTTCAGATTAGAGACCTTTGGCTTCAGATCGTTTaGAAAGCTCACTGCCTTCAGAACTTTCGCCCTGTCACTTTCCAA | + |
|
Preference number: 5 (lower is better) Translates to: REVLLQIRDLWLQIV*KAHCLQNFRPVTFQ Trigger: TTGGAAAGTGACAGGGCGAAAGTTCTGAAGGCAGTGAGCTTTGCAAACGATCTGAAGCCAAAGGTCTCTAATCTGAAGAAGGACTTCTCG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020150.10 |
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| CDS CCA 90 bp | TGTTCTTCTTCTAGCTTCTTAACTGCTTTGGTATCAGAGCTAAGCTaGGCCTCGACTCGTAGAAGATCTTCCTCTTCTTGCCTGCTCACT | + |
|
Preference number: 5 (lower is better) Translates to: CSSSSFLTALVSELS*ASTRRRSSSSCLLT Trigger: AGTGAGCAGGCAAGAAGAGGAAGATCTTCTACGAGTCGAGGCCCAGCTTAGCTCTGATACCAAAGCAGTTAAGAAGCTAGAAGAAGAACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020149.6 |
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| CDS TCA 90 bp | GACTCAAGCTTGCTGGAAATTAAACTGATTTTACTCTGGAGGCCCTaGAACTCGCTGCTCTCTGTTTGCAGTAACCGGTATTGTTTTTCT | + |
|
Preference number: 5 (lower is better) Translates to: DSSLLEIKLILLWRP*NSLLSVCSNRYCFS Trigger: AGAAAAACAATACCGGTTACTGCAAACAGAGAGCAGCGAGTTTCAGGGCCTCCAGAGTAAAATCAGTTTAATTTCCAGCAAGCTTGAGTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020149.6 |
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| CDS TCA 90 bp | TCCTGGTACTTGCTGGAAATTAAACTGATTTTACTCTGGAGGCCCTaGAACTCGCTGCTCTCTGTTTGCAGTAACCGGTATTGTTTTTCT | + |
|
Preference number: 5 (lower is better) Translates to: SWYLLEIKLILLWRP*NSLLSVCSNRYCFS Trigger: AGAAAAACAATACCGGTTACTGCAAACAGAGAGCAGCGAGTTTCAGGGCCTCCAGAGTAAAATCAGTTTAATTTCCAGCAAGTACCAGGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020150.10 |
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| CDS GCA 90 bp | CAATTTCTTTCTCTCTTTGCATTAAGTCAGAACCTAGTCTCCCAATaGGAAGTGTTAGGTCATCTACCAGTGGTTCCAAACGCGAGAAGT | + |
|
Preference number: 5 (lower is better) Translates to: QFLSLFALSQNLVSQ*EVLGHLPVVPNARS Trigger: ACTTCTCGCGTTTGGAACCACTGGTAGATGACCTAACACTTCGCATTGGGAGACTAGGTTCTGACTTAATGCAAAGAGAGAAAGAAATTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020150.10 |
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| CDS GCA 90 bp | TGTTTTCACGCTTGTAATCTTGAGGCCCATGTCTTTGGCCATGGATaGTGTACCTTGGTCTACTTTTATAATGTCCTCAGAAAGTCTTGT | + |
|
Preference number: 5 (lower is better) Translates to: CFHACNLEAHVFGHG*CTLVYFYNVLRKSC Trigger: ACAAGACTTTCTGAGGACATTATAAAAGTAGACCAAGGTACAGCATCCATGGCCAAAGACATGGGCCTCAAGATTACAAGCGTGAAAACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020150.10 |
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| CDS CCA 90 bp | TGTGTGAGCATCTCTTCGCTAGTCTCAATATCACGTATGGATCTTTaGAGGCCAGATACTTCCTGTTCAAATTGGGTCATCAAAGATATG | + |
|
Preference number: 5 (lower is better) Translates to: CVSISSLVSISRMDL*RPDTSCSNWVIKDM Trigger: CATATCTTTGATGACCCAATTTGAACAGGAAGTATCTGGCCTCCAAAGATCCATACGTGATATTGAGACTAGCGAAGAGATGCTCACACA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020149.6 |
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| CDS-3UTR CAA 90 bp | AAGTCCAGGTTCACAAAGAGACTTCATAAACTCATACTTCAAAACATCACCAGTGTTGGCAAGTGTGCCTaGCACTCTTCTACTTTGGGT | + |
|
Preference number: 5 (lower is better) Translates to: KSRFTKRLHKLILQNITSVGKCA*HSSTLG Trigger: ACCCAAAGTAGAAGAGTGCAAGGCACACTTGCCAAC...ACTGGTGATGTTTTGAAGTATGAGTTTATGAAGTCTCTTTGTGAACCTGGACTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020149.6 |
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| CDS CCA 90 bp | ATATCACGTATGGATCTTTGGAGGCCAGATACTTCCTGTTCAAATTaGGTCATCAAAGATATGGATGATGTAGCTTCCTGCAGGGTATTT | + |
|
Preference number: 5 (lower is better) Translates to: ISRMDLWRPDTSCSN*VIKDMDDVASCRVF Trigger: AAATACCCTGCAGGAAGCTACATCATCCATATCTTTGATGACCCAATTTGAACAGGAAGTATCTGGCCTCCAAAGATCCATACGTGATAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020149.6 |
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| CDS CCA 90 bp | CTTGTAATCTTGAGGCCCATGTCTTTGGCCATGGATGCTGTACCTTaGTCTACTTTTATAATGTCCTCAGAAAGTCTTGTTAGTGTGTTA | + |
|
Preference number: 5 (lower is better) Translates to: LVILRPMSLAMDAVP*STFIMSSESLVSVL Trigger: TAACACACTAACAAGACTTTCTGAGGACATTATAAAAGTAGACCAAGGTACAGCATCCATGGCCAAAGACATGGGCCTCAAGATTACAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020150.10 |
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| CDS-3UTR CAA 90 bp | GTGTCACACAGTTCAAACTTTAGAAATAAAAGTCCAGGTTCACAAAGAGACTTCCAGCATTTTCTATGGTaGGCAAGTGTGCCTTGCACT | + |
|
Preference number: 5 (lower is better) Translates to: VSHSSNFRNKSPGSQRDFQHFLW*ASVPCT Trigger: AGTGCAAGGCACACTTGCCAACCATAGAAAATGCTG...GAAGTCTCTTTGTGAACCTGGACTTTTATTTCTAAAGTTTGAACTGTGTGACAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020149.6 |
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| CDS GCA 90 bp | TCCTGTTCAAATTGGGTCATCAAAGATATGGATGATGTAGCTTCCTaGAGGGTATTTTCAGTAGACTCAAGCTTGCTGGAAATTAAACTG | + |
|
Preference number: 5 (lower is better) Translates to: SCSNWVIKDMDDVAS*RVFSVDSSLLEIKL Trigger: CAGTTTAATTTCCAGCAAGCTTGAGTCTACTGAAAATACCCTGCAGGAAGCTACATCATCCATATCTTTGATGACCCAATTTGAACAGGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020149.6 |
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| CDS TCA 90 bp | CTGTCTTCTAAATCTTTTAGACGTTCAGTGAGCGATTTTATTTCTTaGTCCGCGGAGTTAATCTTCAGGGTAACTTCAGAATGTGTATCC | + |
|
Preference number: 5 (lower is better) Translates to: LSSKSFRRSVSDFIS*SAELIFRVTSECVS Trigger: GGATACACATTCTGAAGTTACCCTGAAGATTAACTCCGCGGATCAAGAAATAAAATCGCTCACTGAACGTCTAAAAGATTTAGAAGACAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020149.6 |
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| CDS-3UTR CAA 90 bp | TGTCACACAGTTCAAACTTTAGAAATAAAAGTCCAGGTTCACAAAGAGACTTCAATCTTTAGTAAGCTGTaGTCATACTGGATCCCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: CHTVQTLEIKVQVHKETSIFSKL*SYWIPS Trigger: GGAGGGGATCCAGTATGACAACAGCTTACTAAAGAT...TGAAGTCTCTTTGTGAACCTGGACTTTTATTTCTAAAGTTTGAACTGTGTGACA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020149.6 |
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| CDS CAA 72 bp | CCATCACTCCGCTTCTCGGGCTCAGGAGCAGCCACTTaGGGCCCCGGCTTCTTTCGGCTCTTCACTTCGGAC | + |
|
Preference number: 6 (lower is better) Translates to: PSLRFSGSGAAT*GPGFFRLFTSD Trigger: GTCCGAAGTGAAGAGCCGAAAGAAGCCGGGGCCCAAAGTGGCTGCTCCTGAGCCCGAGAAGCGGAGTGATGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020149.6 ENSMUST00000020150.10 |
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| CDS CCA 72 bp | CATCACTCCGCTTCTCGGGCTCAGGAGCAGCCACTTTaGGCCCCGGCTTCTTTCGGCTCTTCACTTCGGACA | + |
|
Preference number: 6 (lower is better) Translates to: HHSASRAQEQPL*APASFGSSLRT Trigger: TGTCCGAAGTGAAGAGCCGAAAGAAGCCGGGGCCCAAAGTGGCTGCTCCTGAGCCCGAGAAGCGGAGTGATG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020149.6 ENSMUST00000020150.10 |
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| CDS CAA 90 bp | CAGCCAGCCTCTGTGCGACCGAGTCAATTCTTTTCGCATTTTCGCTaGCCGTCTTTCGGAGTGCCGATGTTCGGTCGATGCTGCTCGAGA | + |
|
Preference number: 6 (lower is better) Translates to: QPASVRPSQFFSHFR*PSFGVPMFGRCCSR Trigger: TCTCGAGCAGCATCGACCGAACATCGGCACTCCGAAAGACGGCAAGCGAAAATGCGAAAAGAATTGACTCGGTCGCACAGAGGCTGGCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020150.10 |
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| CDS GCA 72 bp | CGCTTGCCGTCTTTCGGAGTGCCGATGTTCGGTCGATaGTGCTCGAGAGGAGATCACCTATATTTTCCACCG | + |
|
Preference number: 6 (lower is better) Translates to: RLPSFGVPMFGR*CSRGDHLYFPP Trigger: CGGTGGAAAATATAGGTGATCTCCTCTCGAGCAGCATCGACCGAACATCGGCACTCCGAAAGACGGCAAGCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020150.10 |
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| CDS GCA 72 bp | AGCTGGGCCTCGACTCGTAGAAGATCTTCCTCTTCTTaGCTGCTCACTGTTCTGATGTTTCGCAGTGTGCTG | + |
|
Preference number: 6 (lower is better) Translates to: SWASTRRRSSSS*LLTVLMFRSVL Trigger: CAGCACACTGCGAAACATCAGAACAGTGAGCAGGCAAGAAGAGGAAGATCTTCTACGAGTCGAGGCCCAGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020149.6 |
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| CDS GCA 72 bp | ACAGCCCTCAGCATGTCGTCCTCCATGTTGAACATCTaGATCGTCAGCTCCTCCATCTTCCTTTCTGTCCCT | + |
|
Preference number: 6 (lower is better) Translates to: TALSMSSSMLNI*IVSSSIFLSVP Trigger: AGGGACAGAAAGGAAGATGGAGGAGCTGACGATGCAGATGTTCAACATGGAGGACGACATGCTGAGGGCTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020149.6 |
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| CDS GCA 72 bp | CTGTGCGACCGAGTCAATTCTTTTCGCATTTTCGCTTaGCGTCTTTCGGAGTGCCGATGTTCGGTCGATGCT | + |
|
Preference number: 6 (lower is better) Translates to: LCDRVNSFRIFA*RLSECRCSVDA Trigger: AGCATCGACCGAACATCGGCACTCCGAAAGACGGCAAGCGAAAATGCGAAAAGAATTGACTCGGTCGCACAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020150.10 |
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| CDS GCA 72 bp | GCCCTGTCACTTTCCAAGCTTAAAAACCTATCTGTGTaGTCATCGAAATCGCCCTGGAGCTCAGCCAGCCTC | + |
|
Preference number: 6 (lower is better) Translates to: ALSLSKLKNLSV*SSKSPWSSASL Trigger: GAGGCTGGCTGAGCTCCAGGGCGATTTCGATGAGCACACAGATAGGTTTTTAAGCTTGGAAAGTGACAGGGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020150.10 |
||
| CDS CAA 72 bp | TCTGTGCGACCGAGTCAATTCTTTTCGCATTTTCGCTaGCCGTCTTTCGGAGTGCCGATGTTCGGTCGATGC | + |
|
Preference number: 6 (lower is better) Translates to: SVRPSQFFSHFR*PSFGVPMFGRC Trigger: GCATCGACCGAACATCGGCACTCCGAAAGACGGCAAGCGAAAATGCGAAAAGAATTGACTCGGTCGCACAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020150.10 |
||
| CDS CCA 72 bp | CTTAAAAACCTATCTGTGTGCTCATCGAAATCGCCCTaGAGCTCAGCCAGCCTCTGTGCGACCGAGTCAATT | + |
|
Preference number: 6 (lower is better) Translates to: LKNLSVCSSKSP*SSASLCATESI Trigger: AATTGACTCGGTCGCACAGAGGCTGGCTGAGCTCCAGGGCGATTTCGATGAGCACACAGATAGGTTTTTAAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020150.10 |
||
| CDS CAA 72 bp | GAAATCCGCCGTACGTCTGTTTTCACGCTTGTAATCTaGAGGCCCATGTCTTTGGCCATGGATGCTGTACCT | + |
|
Preference number: 6 (lower is better) Translates to: EIRRTSVFTLVI*RPMSLAMDAVP Trigger: AGGTACAGCATCCATGGCCAAAGACATGGGCCTCAAGATTACAAGCGTGAAAACAGACGTACGGCGGATTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020150.10 |
||
| CDS GCA 72 bp | AGAGACCTTTGGCTTCAGATCGTTTGCAAAGCTCACTaGCTTCAGAACTTTCGCCCTGTCACTTTCCAAGCT | + |
|
Preference number: 6 (lower is better) Translates to: RDLWLQIVCKAH*LQNFRPVTFQA Trigger: AGCTTGGAAAGTGACAGGGCGAAAGTTCTGAAGGCAGTGAGCTTTGCAAACGATCTGAAGCCAAAGGTCTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020150.10 |
||
| CDS CAA 72 bp | AGAACGACCAGCTCGTTCTGCATCTTTAGTAAGCTGTaGTCATACTGGATCCCCTCCAGGGTTTTCTGCATC | + |
|
Preference number: 6 (lower is better) Translates to: RTTSSFCIFSKL*SYWIPSRVFCI Trigger: GATGCAGAAAACCCTGGAGGGGATCCAGTATGACAACAGCTTACTAAAGATGCAGAACGAGCTGGTCGTTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020149.6 |
||
| CDS CAA 90 bp | CGCCGTACGTCTGTTTTCACGCTTGTAATCTTGAGGCCCATGTCTTaGGCCATGGATGCTGTACCTTGGTCTACTTTTATAATGTCCTCA | + |
|
Preference number: 6 (lower is better) Translates to: RRTSVFTLVILRPMS*AMDAVPWSTFIMSS Trigger: TGAGGACATTATAAAAGTAGACCAAGGTACAGCATCCATGGCCAAAGACATGGGCCTCAAGATTACAAGCGTGAAAACAGACGTACGGCG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020150.10 |
||
| CDS TCA 72 bp | TCTTCCTTTCTGTCCCTATCAGATCCTGAGAGACTCTaGGAACCGAGTGGACAGCATTTTCTATGGTTGGCA | + |
|
Preference number: 6 (lower is better) Translates to: SSFLSLSDPERL*EPSGQHFLWLA Trigger: TGCCAACCATAGAAAATGCTGTCCACTCGGTTCTCAGAGTCTCTCAGGATCTGATAGGGACAGAAAGGAAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020149.6 |
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| CDS GCA 72 bp | AGTGGACAGCATTTTCTATGGTTGGCAAGTGTGCCTTaGACTCTTCTACTTTGGGTTCGTAGCTGGAGAGTT | + |
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Preference number: 6 (lower is better) Translates to: SGQHFLWLASVP*TLLLWVRSWRV Trigger: AACTCTCCAGCTACGAACCCAAAGTAGAAGAGTGCAAGGCACACTTGCCAACCATAGAAAATGCTGTCCACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020149.6 |
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| CDS GCA 72 bp | CTTCTTCAGATTAGAGACCTTTGGCTTCAGATCGTTTaGAAAGCTCACTGCCTTCAGAACTTTCGCCCTGTC | + |
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Preference number: 6 (lower is better) Translates to: LLQIRDLWLQIV*KAHCLQNFRPV Trigger: GACAGGGCGAAAGTTCTGAAGGCAGTGAGCTTTGCAAACGATCTGAAGCCAAAGGTCTCTAATCTGAAGAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020150.10 |
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| CDS CCA 72 bp | CTATGGTTGGCAAGTGTGCCTTGCACTCTTCTACTTTaGGTTCGTAGCTGGAGAGTTTGTTGGTCAGATCTT | + |
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Preference number: 6 (lower is better) Translates to: LWLASVPCTLLL*VRSWRVCWSDL Trigger: AAGATCTGACCAACAAACTCTCCAGCTACGAACCCAAAGTAGAAGAGTGCAAGGCACACTTGCCAACCATAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020149.6 |
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| CDS CCA 72 bp | CAAACGCGAGAAGTCCTTCTTCAGATTAGAGACCTTTaGCTTCAGATCGTTTGCAAAGCTCACTGCCTTCAG | + |
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Preference number: 6 (lower is better) Translates to: QTREVLLQIRDL*LQIVCKAHCLQ Trigger: CTGAAGGCAGTGAGCTTTGCAAACGATCTGAAGCCAAAGGTCTCTAATCTGAAGAAGGACTTCTCGCGTTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020150.10 |
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| CDS TCA 72 bp | TATTGTTTTTCTACCTTCGCAAACTTTTCTGATTGTTaGAATACAAGCCAGGCCAGGCCCAGGGTCATCGCC | + |
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Preference number: 6 (lower is better) Translates to: YCFSTFANFSDC*NTSQARPRVIA Trigger: GGCGATGACCCTGGGCCTGGCCTGGCTTGTATTTCAACAATCAGAAAAGTTTGCGAAGGTAGAAAAACAATA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020149.6 ENSMUST00000020150.10 |
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| CDS GCA 72 bp | TTGTTGGTCAGATCTTCGTCTCTGGCTAGGAGCGTGTaGTGTTCTTCTTCTAGCTTCTTAACTGCTTTGGTA | + |
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Preference number: 6 (lower is better) Translates to: LLVRSSSLARSV*CSSSSFLTALV Trigger: TACCAAAGCAGTTAAGAAGCTAGAAGAAGAACAGCACACGCTCCTAGCCAGAGACGAAGATCTGACCAACAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020149.6 |
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| CDS TCA 72 bp | TTGCTGGAAATTAAACTGATTTTACTCTGGAGGCCCTaGAACTCGCTGCTCTCTGTTTGCAGTAACCGGTAT | + |
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Preference number: 6 (lower is better) Translates to: LLEIKLILLWRP*NSLLSVCSNRY Trigger: ATACCGGTTACTGCAAACAGAGAGCAGCGAGTTTCAGGGCCTCCAGAGTAAAATCAGTTTAATTTCCAGCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020149.6 ENSMUST00000020150.10 |
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| CDS GCA 72 bp | GCTTGTAATCTTGAGGCCCATGTCTTTGGCCATGGATaGTGTACCTTGGTCTACTTTTATAATGTCCTCAGA | + |
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Preference number: 6 (lower is better) Translates to: ACNLEAHVFGHG*CTLVYFYNVLR Trigger: TCTGAGGACATTATAAAAGTAGACCAAGGTACAGCATCCATGGCCAAAGACATGGGCCTCAAGATTACAAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020150.10 |
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| CDS CAA 72 bp | TTCAGTTGTTCCACGAGAGCTTCACATTCCTGGTACTaGCTGGAAATTAAACTGATTTTACTCTGGAGGCCC | + |
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Preference number: 6 (lower is better) Translates to: FSCSTRASHSWY*LEIKLILLWRP Trigger: GGGCCTCCAGAGTAAAATCAGTTTAATTTCCAGCAAGTACCAGGAATGTGAAGCTCTCGTGGAACAACTGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020150.10 |
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| CDS CAA 72 bp | CTTGAGGCCCATGTCTTTGGCCATGGATGCTGTACCTaGGTCTACTTTTATAATGTCCTCAGAAAGTCTTGT | + |
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Preference number: 6 (lower is better) Translates to: LEAHVFGHGCCT*VYFYNVLRKSC Trigger: ACAAGACTTTCTGAGGACATTATAAAAGTAGACCAAGGTACAGCATCCATGGCCAAAGACATGGGCCTCAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020150.10 |
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| CDS TCA 72 bp | CTTCAGGGTAACTTCAGAATGTGTATCCTTCACTTCTaGTTTGAAGACGGCTGTGTCATCGATCATTTCTGC | + |
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Preference number: 6 (lower is better) Translates to: LQGNFRMCILHF*FEDGCVIDHFC Trigger: GCAGAAATGATCGATGACACAGCCGTCTTCAAATCAGAAGTGAAGGATACACATTCTGAAGTTACCCTGAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020149.6 |
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| CDS CCA 72 bp | ATCTCTTCGCTAGTCTCAATATCACGTATGGATCTTTaGAGGCCAGATACTTCCTGTTCAAATTGGGTCATC | + |
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Preference number: 6 (lower is better) Translates to: ISSLVSISRMDL*RPDTSCSNWVI Trigger: GATGACCCAATTTGAACAGGAAGTATCTGGCCTCCAAAGATCCATACGTGATATTGAGACTAGCGAAGAGAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020149.6 |
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| CDS CCA 72 bp | TTGAGGCCCATGTCTTTGGCCATGGATGCTGTACCTTaGTCTACTTTTATAATGTCCTCAGAAAGTCTTGTT | + |
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Preference number: 6 (lower is better) Translates to: LRPMSLAMDAVP*STFIMSSESLV Trigger: AACAAGACTTTCTGAGGACATTATAAAAGTAGACCAAGGTACAGCATCCATGGCCAAAGACATGGGCCTCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020150.10 |
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| CDS CAA 72 bp | CATCTCTTCGCTAGTCTCAATATCACGTATGGATCTTaGGAGGCCAGATACTTCCTGTTCAAATTGGGTCAT | + |
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Preference number: 6 (lower is better) Translates to: HLFASLNITYGS*EARYFLFKLGH Trigger: ATGACCCAATTTGAACAGGAAGTATCTGGCCTCCAAAGATCCATACGTGATATTGAGACTAGCGAAGAGATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020149.6 |
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| CDS CAA 72 bp | AGGGTAACTTCAGAATGTGTATCCTTCACTTCTGATTaGAAGACGGCTGTGTCATCGATCATTTCTGCCAGT | + |
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Preference number: 6 (lower is better) Translates to: RVTSECVSFTSD*KTAVSSIISAS Trigger: ACTGGCAGAAATGATCGATGACACAGCCGTCTTCAAATCAGAAGTGAAGGATACACATTCTGAAGTTACCCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020149.6 |
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| CDS GCA 72 bp | AATTGGGTCATCAAAGATATGGATGATGTAGCTTCCTaGAGGGTATTTTCAGTAGACTCAAGCTTGCTGGAA | + |
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Preference number: 6 (lower is better) Translates to: NWVIKDMDDVAS*RVFSVDSSLLE Trigger: TTCCAGCAAGCTTGAGTCTACTGAAAATACCCTGCAGGAAGCTACATCATCCATATCTTTGATGACCCAATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020149.6 |
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| CDS CCA 72 bp | AAAGCCTTCAGTTGTTCCACGAGAGCTTCACATTCCTaGTACTTGCTGGAAATTAAACTGATTTTACTCTGG | + |
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Preference number: 6 (lower is better) Translates to: KAFSCSTRASHS*YLLEIKLILLW Trigger: CCAGAGTAAAATCAGTTTAATTTCCAGCAAGTACCAGGAATGTGAAGCTCTCGTGGAACAACTGAAGGCTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020150.10 |
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| CDS CAA 90 bp | TTGTGTGAGCATCTCTTCGCTAGTCTCAATATCACGTATGGATCTTaGGAGGCCAGATACTTCCTGTTCAAATTGGGTCATCAAAGATAT | + |
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Preference number: 6 (lower is better) Translates to: LCEHLFASLNITYGS*EARYFLFKLGHQRY Trigger: ATATCTTTGATGACCCAATTTGAACAGGAAGTATCTGGCCTCCAAAGATCCATACGTGATATTGAGACTAGCGAAGAGATGCTCACACAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020149.6 |
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| CDS CAA 90 bp | TTAATCTTCAGGGTAACTTCAGAATGTGTATCCTTCACTTCTGATTaGAAGACGGCTGTGTCATCGATCATTTCTGCCAGTGTTCTCTTC | + |
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Preference number: 6 (lower is better) Translates to: LIFRVTSECVSFTSD*KTAVSSIISASVLF Trigger: GAAGAGAACACTGGCAGAAATGATCGATGACACAGCCGTCTTCAAATCAGAAGTGAAGGATACACATTCTGAAGTTACCCTGAAGATTAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020149.6 |
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| CDS TCA 72 bp | TACTTCCTGTTCAAATTGGGTCATCAAAGATATGGATaGTGTAGCTTCCTGCAGGGTATTTTCAGTAGACTC | + |
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Preference number: 6 (lower is better) Translates to: YFLFKLGHQRYG*CSFLQGIFSRL Trigger: GAGTCTACTGAAAATACCCTGCAGGAAGCTACATCATCCATATCTTTGATGACCCAATTTGAACAGGAAGTA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020149.6 |
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| CDS CAA 90 bp | TCTCTTCCAGAAGTCTGTAATGTTCTGGAATTTCTCATTAAGGTTTaGCATCTTTTGTGTGAGCATCTCTTCGCTAGTCTCAATATCACG | + |
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Preference number: 6 (lower is better) Translates to: SLPEVCNVLEFLIKV*HLLCEHLFASLNIT Trigger: CGTGATATTGAGACTAGCGAAGAGATGCTCACACAAAAGATGCAAAACCTTAATGAGAAATTCCAGAACATTACAGACTTCTGGAAGAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020149.6 |
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| CDS CCA 72 bp | TCTGCCAGTGTTCTCTTCCAGAAGTCTGTAATGTTCTaGAATTTCTCATTAAGGTTTTGCATCTTTTGTGTG | + |
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Preference number: 6 (lower is better) Translates to: SASVLFQKSVMF*NFSLRFCIFCV Trigger: CACACAAAAGATGCAAAACCTTAATGAGAAATTCCAGAACATTACAGACTTCTGGAAGAGAACACTGGCAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020149.6 |
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| CDS CAA 90 bp | GAAGTCTGTAATGTTCTGGAATTTCTCATTAAGGTTTTGCATCTTTaGTGTGAGCATCTCTTCGCTAGTCTCAATATCACGTATGGATCT | + |
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Preference number: 6 (lower is better) Translates to: EVCNVLEFLIKVLHL*CEHLFASLNITYGS Trigger: AGATCCATACGTGATATTGAGACTAGCGAAGAGATGCTCACACAAAAGATGCAAAACCTTAATGAGAAATTCCAGAACATTACAGACTTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020149.6 |
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| CDS TCA 72 bp | AAATCTTTTAGACGTTCAGTGAGCGATTTTATTTCTTaGTCCGCGGAGTTAATCTTCAGGGTAACTTCAGAA | + |
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Preference number: 6 (lower is better) Translates to: KSFRRSVSDFIS*SAELIFRVTSE Trigger: TTCTGAAGTTACCCTGAAGATTAACTCCGCGGATCAAGAAATAAAATCGCTCACTGAACGTCTAAAAGATTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020149.6 |
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| CDS CAA 72 bp | AATGTTCTGGAATTTCTCATTAAGGTTTTGCATCTTTaGTGTGAGCATCTCTTCGCTAGTCTCAATATCACG | + |
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Preference number: 6 (lower is better) Translates to: NVLEFLIKVLHL*CEHLFASLNIT Trigger: CGTGATATTGAGACTAGCGAAGAGATGCTCACACAAAAGATGCAAAACCTTAATGAGAAATTCCAGAACATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020149.6 |
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