Pregenerated sensors for IHO1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000047220Ensembl transcript IDs: ENSMUST00000076592.4
Found 132 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AGAGATCTGCCTGCCTCTGCCTCCCCAGTGCTGGGATTAAAGGTGTaGATCACCAGCACCAGGATTAACACTCTGTTCTTAAGTAGTCTC | + |
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Preference number: 1 (lower is better) Translates to: RDLPASASPVLGLKV*ITSTRINTLFLSSL Trigger: GAGACTACTTAAGAACAGAGTGTTAATCCTGGTGCTGGTGATGCACACCTTTAATCCCAGCACTGGGGAGGCAGAGGCAGGCAGATCTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076592.4 |
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| 3UTR TCA 90 bp | TCTCTTCACTGTCTCCACACATTTCTTCCCCGTAACTTCCCGCTGTaGGCAGCAACTGATACTGAAAGTACTGGATTCTCCCCTTCCTCC | + |
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Preference number: 1 (lower is better) Translates to: SLHCLHTFLPRNFPL*AATDTESTGFSPSS Trigger: GGAGGAAGGGGAGAATCCAGTACTTTCAGTATCAGTTGCTGCTCACAGCGGGAAGTTACGGGGAAGAAATGTGTGGAGACAGTGAAGAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000076592.4 |
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| 3UTR TCA 90 bp | AATTGTTCAACAGGAATAAGGTCCTTTGGTCTCAAAGCTTCCTTCTaGTGGCCCTGTAGTCTGGGGAAGGGCTGGAAGGAAGCGTTCCTG | + |
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Preference number: 1 (lower is better) Translates to: NCSTGIRSFGLKASF*WPCSLGKGWKEAFL Trigger: CAGGAACGCTTCCTTCCAGCCCTTCCCCAGACTACAGGGCCATCAGAAGGAAGCTTTGAGACCAAAGGACCTTATTCCTGTTGAACAATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076592.4 |
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| 3UTR-3UTR CCA 90 bp | TGGCTTTTCAGGACAAGATTTCTCTGTGTAGCTCTGGCTGTCCTGGAATTCGCTTCCCCTTCCTCCTACTaGCCACAGTCAGTCAAGGCC | + |
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Preference number: 2 (lower is better) Translates to: WLFRTRFLCVALAVLEFASPSSY*PQSVKA Trigger: GGCCTTGACTGACTGTGGCCAGTAGGAGGAAGGGGA...AGCGAATTCCAGGACAGCCAGAGCTACACAGAGAAATCTTGTCCTGAAAAGCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000076592.4 |
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| 3UTR-3UTR GCA 90 bp | CTGCTGAATCTCAGGGGTGAGTCACCACACCCCACTTTCATAAGCAGCTTTAATTCAAACTCAGAGATCTaGCTGCCTCTGCCTCCCCAG | + |
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Preference number: 2 (lower is better) Translates to: LLNLRGESPHPTFISSFNSNSEI*LPLPPQ Trigger: CTGGGGAGGCAGAGGCAGGCAGATCTCTGAGTTTGA...ATTAAAGCTGCTTATGAAAGTGGGGTGTGGTGACTCACCCCTGAGATTCAGCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000076592.4 |
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| 3UTR-3UTR TCA 90 bp | TCAGGTGCAGGGAACGTCTTGAGAGCTACTCACACAGTCACAAAGTTTCTGAGACGTAACTTCCCGCTGTaGGCAGCAACTGATACTGAA | + |
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Preference number: 2 (lower is better) Translates to: SGAGNVLRATHTVTKFLRRNFPL*AATDTE Trigger: TTCAGTATCAGTTGCTGCTCACAGCGGGAAGTTACG...TCTCAGAAACTTTGTGACTGTGTGAGTAGCTCTCAAGACGTTCCCTGCACCTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076592.4 |
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| 3UTR-3UTR GCA 90 bp | GTACCAGTCAGGTGCAGGGAACGTCTTGAGAGCTACTCACACAGTCACAAAGTTGATGCTGTGTGCTGTTaGTCAATCCAATGTCCTACA | + |
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Preference number: 2 (lower is better) Translates to: VPVRCRERLESYSHSHKVDAVCC*SIQCPT Trigger: TGTAGGACATTGGATTGAGCAACAGCACACAGCATC...AACTTTGTGACTGTGTGAGTAGCTCTCAAGACGTTCCCTGCACCTGACTGGTAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076592.4 |
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| 3UTR-3UTR GCA 90 bp | AAAGCCAGCCAAGGCTGCATAATAAACCTCTGTCTAATAGTGTACCCTGTAACAAAGGTACCAGTCAGGTaGAGGGAACGTCTTGAGAGC | + |
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Preference number: 2 (lower is better) Translates to: KASQGCIINLCLIVYPVTKVPVR*RERLES Trigger: GCTCTCAAGACGTTCCCTGCACCTGACTGGTACCTT...TGTTACAGGGTACACTATTAGACAGAGGTTTATTATGCAGCCTTGGCTGGCTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076592.4 |
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| 3UTR TCA 72 bp | CAGCCACTTTCTGATGCCTCACCACAGGCTACTCCCTaGGTTCTCTTCACTGTCTCCACACATTTCTTCCCC | + |
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Preference number: 3 (lower is better) Translates to: QPLSDASPQATP*VLFTVSTHFFP Trigger: GGGGAAGAAATGTGTGGAGACAGTGAAGAGAACTCAGGGAGTAGCCTGTGGTGAGGCATCAGAAAGTGGCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076592.4 |
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| 3UTR GCA 72 bp | CCTGCCTCTGCCTCCCCAGTGCTGGGATTAAAGGTGTaGATCACCAGCACCAGGATTAACACTCTGTTCTTA | + |
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Preference number: 3 (lower is better) Translates to: PASASPVLGLKV*ITSTRINTLFL Trigger: TAAGAACAGAGTGTTAATCCTGGTGCTGGTGATGCACACCTTTAATCCCAGCACTGGGGAGGCAGAGGCAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076592.4 |
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| 3UTR TCA 72 bp | ACAGGAATAAGGTCCTTTGGTCTCAAAGCTTCCTTCTaGTGGCCCTGTAGTCTGGGGAAGGGCTGGAAGGAA | + |
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Preference number: 3 (lower is better) Translates to: TGIRSFGLKASF*WPCSLGKGWKE Trigger: TTCCTTCCAGCCCTTCCCCAGACTACAGGGCCATCAGAAGGAAGCTTTGAGACCAAAGGACCTTATTCCTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076592.4 |
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| 3UTR GCA 72 bp | AAGATAAAGCTGAGGCTCAGGAAGGTACCAGTCAGGTaGAGGGAACGTCTTGAGAGCTACTCACACAGTCAC | + |
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Preference number: 3 (lower is better) Translates to: KIKLRLRKVPVR*RERLESYSHSH Trigger: GTGACTGTGTGAGTAGCTCTCAAGACGTTCCCTGCACCTGACTGGTACCTTCCTGAGCCTCAGCTTTATCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076592.4 |
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| 3UTR TCA 72 bp | TGTCTCCACACATTTCTTCCCCGTAACTTCCCGCTGTaGGCAGCAACTGATACTGAAAGTACTGGATTCTCC | + |
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Preference number: 3 (lower is better) Translates to: CLHTFLPRNFPL*AATDTESTGFS Trigger: GGAGAATCCAGTACTTTCAGTATCAGTTGCTGCTCACAGCGGGAAGTTACGGGGAAGAAATGTGTGGAGACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076592.4 |
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| 3UTR TCA 72 bp | TGCCAATGTTTTCACCAAGGACATACAGCCACTTTCTaGTGCCTCACCACAGGCTACTCCCTGAGTTCTCTT | + |
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Preference number: 3 (lower is better) Translates to: CQCFHQGHTATF*CLTTGYSLSSL Trigger: AAGAGAACTCAGGGAGTAGCCTGTGGTGAGGCATCAGAAAGTGGCTGTATGTCCTTGGTGAAAACATTGGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076592.4 |
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| 3UTR GCA 72 bp | AGGCTGGATAAGCCAGCTTCAGATGCTGTGTGCTGTTaGTCAATCCAATGTCCTACAGTTTGTCGTTCTGAG | + |
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Preference number: 3 (lower is better) Translates to: RLDKPASDAVCC*SIQCPTVCRSE Trigger: CTCAGAACGACAAACTGTAGGACATTGGATTGAGCAACAGCACACAGCATCTGAAGCTGGCTTATCCAGCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076592.4 |
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| 3UTR-3UTR CAA 90 bp | AAAGCCAGCCAAGGCTGCATAATAAACCTCTGTCTAATAGTGTACCCTGTAACAAGATGCTGTGTGCTGTaGCTCAATCCAATGTCCTAC | + |
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Preference number: 3 (lower is better) Translates to: KASQGCIINLCLIVYPVTRCCVL*LNPMSY Trigger: GTAGGACATTGGATTGAGCAACAGCACACAGCATCT...TGTTACAGGGTACACTATTAGACAGAGGTTTATTATGCAGCCTTGGCTGGCTTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076592.4 |
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| 3UTR TCA 72 bp | ATAATAAACCTCTGTCTAATAGTGTACCCTGTAACATaGCCTCTCAGGGAAAAGACAAAACTCTTTGACAGC | + |
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Preference number: 3 (lower is better) Translates to: IINLCLIVYPVT*PLREKTKLFDS Trigger: GCTGTCAAAGAGTTTTGTCTTTTCCCTGAGAGGTCATGTTACAGGGTACACTATTAGACAGAGGTTTATTAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000076592.4 |
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| 3UTR TCA 72 bp | ATTAACACTCTGTTCTTAAGTAGTCTCATTTACAGTTaGGAATCGAGACATGCTTATAGTACCAACATTCTG | + |
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Preference number: 3 (lower is better) Translates to: INTLFLSSLIYS*ESRHAYSTNIL Trigger: CAGAATGTTGGTACTATAAGCATGTCTCGATTCTCAACTGTAAATGAGACTACTTAAGAACAGAGTGTTAAT 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076592.4 |
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| CDS-3UTR CCA 90 bp | TTTTCCGGAGCTGAGGACCGAACCCAGGGCCTTGGGCTTGCTAGGCAAGCACTTCCTGCAGGAGCCTCCTaGGCCTGCCAAGTAGCTGGC | + |
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Preference number: 4 (lower is better) Translates to: FSGAEDRTQGLGLARQALPAGAS*ACQVAG Trigger: GCCAGCTACTTGGCAGGCCCAGGAGGCTCCTGCAGG...AAGTGCTTGCCTAGCAAGCCCAAGGCCCTGGGTTCGGTCCTCAGCTCCGGAAAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076592.4 |
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| CDS-3UTR GCA 90 bp | GTACCAGTCAGGTGCAGGGAACGTCTTGAGAGCTACTCACACAGTCACAAAGTTCGTACTGGGATTTCCTaGAGGAGCCTCCTGGGCCTG | + |
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Preference number: 4 (lower is better) Translates to: VPVRCRERLESYSHSHKVRTGIS*RSLLGL Trigger: CAGGCCCAGGAGGCTCCTGCAGGAAATCCCAGTACG...AACTTTGTGACTGTGTGAGTAGCTCTCAAGACGTTCCCTGCACCTGACTGGTAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076592.4 |
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| CDS-3UTR GCA 90 bp | CCAATGTTTTCACCAAGGACATACAGCCACTTTCTGATGCCTCACCACAGGCTAGGTCTCCCTGGGAGCTaGTGTCTGTGGAAGAGCGCT | + |
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Preference number: 4 (lower is better) Translates to: PMFSPRTYSHFLMPHHRLGLPGS*CLWKSA Trigger: AGCGCTCTTCCACAGACAGCAGCTCCCAGGGAGACC...TAGCCTGTGGTGAGGCATCAGAAAGTGGCTGTATGTCCTTGGTGAAAACATTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076592.4 |
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| CDS-3UTR TCA 90 bp | TACTCCCTGAGTTCTCTTCACTGTCTCCACACATTTCTTCCCCGTAACTTCCCGGGATACCAGGCACAATaGGCTGGCTCAGGTTGTCAC | + |
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Preference number: 4 (lower is better) Translates to: YSLSSLHCLHTFLPRNFPGYQAQ*AGSGCH Trigger: GTGACAACCTGAGCCAGCTCATTGTGCCTGGTATCC...CGGGAAGTTACGGGGAAGAAATGTGTGGAGACAGTGAAGAGAACTCAGGGAGTA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076592.4 |
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| CDS-3UTR TCA 90 bp | CTGCTGAATCTCAGGGGTGAGTCACCACACCCCACTTTCATAAGCAGCTTTAATACTTACGTCCCGCTGTaGAGCTCCTTGGGCCATCAG | + |
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Preference number: 4 (lower is better) Translates to: LLNLRGESPHPTFISSFNTYVPL*SSLGHQ Trigger: CTGATGGCCCAAGGAGCTTCACAGCGGGACGTAAGT...ATTAAAGCTGCTTATGAAAGTGGGGTGTGGTGACTCACCCCTGAGATTCAGCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000076592.4 |
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| CDS-3UTR GCA 90 bp | GTACCAGTCAGGTGCAGGGAACGTCTTGAGAGCTACTCACACAGTCACAAAGTTTCAACCATCAGGTCGTaGTGGACCCGTGCAGTCTCT | + |
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Preference number: 4 (lower is better) Translates to: VPVRCRERLESYSHSHKVSTIRS*WTRAVS Trigger: AGAGACTGCACGGGTCCAGCACGACCTGATGGTTGA...AACTTTGTGACTGTGTGAGTAGCTCTCAAGACGTTCCCTGCACCTGACTGGTAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076592.4 |
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| CDS-3UTR GCA 90 bp | TCAGGTGCAGGGAACGTCTTGAGAGCTACTCACACAGTCACAAAGTTTCTGAGATCAGACCTTGGCCATTaGCAGCCCTCTGGCTTGGGA | + |
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Preference number: 4 (lower is better) Translates to: SGAGNVLRATHTVTKFLRSDLGH*QPSGLG Trigger: TCCCAAGCCAGAGGGCTGGCAATGGCCAAGGTCTGA...TCTCAGAAACTTTGTGACTGTGTGAGTAGCTCTCAAGACGTTCCCTGCACCTGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076592.4 |
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| CDS-3UTR CCA 90 bp | GTACCAGTCAGGTGCAGGGAACGTCTTGAGAGCTACTCACACAGTCACAAAGTTGCTGGATCTCAAGGATaGCCTGCTCCATGCTGCCTT | + |
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Preference number: 4 (lower is better) Translates to: VPVRCRERLESYSHSHKVAGSQG*PAPCCL Trigger: AAGGCAGCATGGAGCAGGCCATCCTTGAGATCCAGC...AACTTTGTGACTGTGTGAGTAGCTCTCAAGACGTTCCCTGCACCTGACTGGTAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076592.4 |
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| CDS-3UTR CCA 90 bp | TCAGGTGCAGGGAACGTCTTGAGAGCTACTCACACAGTCACAAAGTTTCTGAGAGGCCTGCCAAGTAGCTaGCTCCTCAGAGGGATGCTT | + |
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Preference number: 4 (lower is better) Translates to: SGAGNVLRATHTVTKFLRGLPSS*LLRGML Trigger: AAGCATCCCTCTGAGGAGCCAGCTACTTGGCAGGCC...TCTCAGAAACTTTGTGACTGTGTGAGTAGCTCTCAAGACGTTCCCTGCACCTGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076592.4 |
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| CDS-3UTR CCA 90 bp | TACTCCCTGAGTTCTCTTCACTGTCTCCACACATTTCTTCCCCGTAACTTCCCGCCATTGCCAGCCCTCTaGCTTGGGAGGTTAGAGAAG | + |
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Preference number: 4 (lower is better) Translates to: YSLSSLHCLHTFLPRNFPPLPAL*LGRLEK Trigger: CTTCTCTAACCTCCCAAGCCAGAGGGCTGGCAATGG...CGGGAAGTTACGGGGAAGAAATGTGTGGAGACAGTGAAGAGAACTCAGGGAGTA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076592.4 |
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| CDS-3UTR CCA 90 bp | CTGCTGAATCTCAGGGGTGAGTCACCACACCCCACTTTCATAAGCAGCTTTAATGGGAGCTGCTGTCTGTaGAAGAGCGCTGGGAATGCT | + |
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Preference number: 4 (lower is better) Translates to: LLNLRGESPHPTFISSFNGSCCL*KSAGNA Trigger: AGCATTCCCAGCGCTCTTCCACAGACAGCAGCTCCC...ATTAAAGCTGCTTATGAAAGTGGGGTGTGGTGACTCACCCCTGAGATTCAGCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000076592.4 |
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| CDS-3UTR CCA 90 bp | TACTCCCTGAGTTCTCTTCACTGTCTCCACACATTTCTTCCCCGTAACTTCCCGATCTGCTGGTCTCCCTaGGAGCTGCTGTCTGTGGAA | + |
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Preference number: 4 (lower is better) Translates to: YSLSSLHCLHTFLPRNFPICWSP*ELLSVE Trigger: TTCCACAGACAGCAGCTCCCAGGGAGACCAGCAGAT...CGGGAAGTTACGGGGAAGAAATGTGTGGAGACAGTGAAGAGAACTCAGGGAGTA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076592.4 |
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| CDS-3UTR TCA 90 bp | GTACCAGTCAGGTGCAGGGAACGTCTTGAGAGCTACTCACACAGTCACAAAGTTGCCTTTGTCTCTCACTaGCTCAACCATCAGGTCGTG | + |
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Preference number: 4 (lower is better) Translates to: VPVRCRERLESYSHSHKVAFVSH*LNHQVV Trigger: CACGACCTGATGGTTGAGTCAGTGAGAGACAAAGGC...AACTTTGTGACTGTGTGAGTAGCTCTCAAGACGTTCCCTGCACCTGACTGGTAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076592.4 |
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| CDS-3UTR TCA 90 bp | TACTCCCTGAGTTCTCTTCACTGTCTCCACACATTTCTTCCCCGTAACTTCCCGAGATGCCCAGCCACCTaGGGCACAGAGGTGAATTTT | + |
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Preference number: 4 (lower is better) Translates to: YSLSSLHCLHTFLPRNFPRCPAT*GTEVNF Trigger: AAAATTCACCTCTGTGCCTCAGGTGGCTGGGCATCT...CGGGAAGTTACGGGGAAGAAATGTGTGGAGACAGTGAAGAGAACTCAGGGAGTA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076592.4 |
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| CDS-3UTR GCA 90 bp | TGGCTTTTCAGGACAAGATTTCTCTGTGTAGCTCTGGCTGTCCTGGAATTCGCTGGATGGCCTGCTCCATaGTGCCTTTGTCTCTCACTG | + |
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Preference number: 4 (lower is better) Translates to: WLFRTRFLCVALAVLEFAGWPAP*CLCLSL Trigger: CAGTGAGAGACAAAGGCAGCATGGAGCAGGCCATCC...AGCGAATTCCAGGACAGCCAGAGCTACACAGAGAAATCTTGTCCTGAAAAGCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076592.4 |
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| CDS-3UTR CCA 90 bp | TTTTCCGGAGCTGAGGACCGAACCCAGGGCCTTGGGCTTGCTAGGCAAGCACTTATTATTCCAGTTAGATaGTTTAGTGATCCCAGAGCC | + |
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Preference number: 4 (lower is better) Translates to: FSGAEDRTQGLGLARQALIIPVR*FSDPRA Trigger: GGCTCTGGGATCACTAAACCATCTAACTGGAATAAT...AAGTGCTTGCCTAGCAAGCCCAAGGCCCTGGGTTCGGTCCTCAGCTCCGGAAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076592.4 |
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| CDS-3UTR CCA 90 bp | TGGCTTTTCAGGACAAGATTTCTCTGTGTAGCTCTGGCTGTCCTGGAATTCGCTGCCAGCCCTCTGGCTTaGGAGGTTAGAGAAGTGGTT | + |
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Preference number: 4 (lower is better) Translates to: WLFRTRFLCVALAVLEFAASPLA*EVREVV Trigger: AACCACTTCTCTAACCTCCCAAGCCAGAGGGCTGGC...AGCGAATTCCAGGACAGCCAGAGCTACACAGAGAAATCTTGTCCTGAAAAGCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076592.4 |
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| CDS-3UTR CCA 90 bp | TTTTCCGGAGCTGAGGACCGAACCCAGGGCCTTGGGCTTGCTAGGCAAGCACTTAGGCATTCTTCACTCTaGCTTCAAACTTACTTACGT | + |
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Preference number: 4 (lower is better) Translates to: FSGAEDRTQGLGLARQALRHSSL*LQTYLR Trigger: ACGTAAGTAAGTTTGAAGCCAGAGTGAAGAATGCCT...AAGTGCTTGCCTAGCAAGCCCAAGGCCCTGGGTTCGGTCCTCAGCTCCGGAAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076592.4 |
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| CDS-3UTR CCA 90 bp | TCAGGTGCAGGGAACGTCTTGAGAGCTACTCACACAGTCACAAAGTTTCTGAGATCTGTGGAAGAGCGCTaGGAATGCTGCACGAGGTTC | + |
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Preference number: 4 (lower is better) Translates to: SGAGNVLRATHTVTKFLRSVEER*ECCTRF Trigger: GAACCTCGTGCAGCATTCCCAGCGCTCTTCCACAGA...TCTCAGAAACTTTGTGACTGTGTGAGTAGCTCTCAAGACGTTCCCTGCACCTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076592.4 |
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| 3UTR CAA 72 bp | GGCTCAGGAAGGTACCAGTCAGGTGCAGGGAACGTCTaGAGAGCTACTCACACAGTCACAAAGTTTCTGAGA | + |
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Preference number: 4 (lower is better) Translates to: GSGRYQSGAGNV*RATHTVTKFLR Trigger: TCTCAGAAACTTTGTGACTGTGTGAGTAGCTCTCAAGACGTTCCCTGCACCTGACTGGTACCTTCCTGAGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076592.4 |
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| CDS-3UTR TCA 90 bp | TGGCTTTTCAGGACAAGATTTCTCTGTGTAGCTCTGGCTGTCCTGGAATTCGCTCGCTTCTGGTGGTCATaGCCCAGTTCTTGCAGTAAG | + |
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Preference number: 4 (lower is better) Translates to: WLFRTRFLCVALAVLEFARFWWS*PSSCSK Trigger: CTTACTGCAAGAACTGGGTCATGACCACCAGAAGCG...AGCGAATTCCAGGACAGCCAGAGCTACACAGAGAAATCTTGTCCTGAAAAGCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076592.4 |
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| CDS-3UTR GCA 90 bp | CTGCTGAATCTCAGGGGTGAGTCACCACACCCCACTTTCATAAGCAGCTTTAATTGGCCTGCTCCATGCTaGCTTTGTCTCTCACTGACT | + |
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Preference number: 4 (lower is better) Translates to: LLNLRGESPHPTFISSFNWPAPC*LCLSLT Trigger: AGTCAGTGAGAGACAAAGGCAGCATGGAGCAGGCCA...ATTAAAGCTGCTTATGAAAGTGGGGTGTGGTGACTCACCCCTGAGATTCAGCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000076592.4 |
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| CDS-3UTR CCA 90 bp | GTACCAGTCAGGTGCAGGGAACGTCTTGAGAGCTACTCACACAGTCACAAAGTTGTAAAATGGAGGCTCTaGGTCAGAGATGGTGAGGTC | + |
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Preference number: 4 (lower is better) Translates to: VPVRCRERLESYSHSHKVVKWRL*VRDGEV Trigger: GACCTCACCATCTCTGACCCAGAGCCTCCATTTTAC...AACTTTGTGACTGTGTGAGTAGCTCTCAAGACGTTCCCTGCACCTGACTGGTAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076592.4 |
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| CDS-3UTR CCA 90 bp | TACTCCCTGAGTTCTCTTCACTGTCTCCACACATTTCTTCCCCGTAACTTCCCGTCCTGCCTGGTAAAATaGAGGCTCTGGGTCAGAGAT | + |
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Preference number: 4 (lower is better) Translates to: YSLSSLHCLHTFLPRNFPSCLVK*RLWVRD Trigger: ATCTCTGACCCAGAGCCTCCATTTTACCAGGCAGGA...CGGGAAGTTACGGGGAAGAAATGTGTGGAGACAGTGAAGAGAACTCAGGGAGTA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000076592.4 |
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| CDS-3UTR CCA 90 bp | CTGCTGAATCTCAGGGGTGAGTCACCACACCCCACTTTCATAAGCAGCTTTAATTGCCCATCGCCTCTATaGAGCCCATCTGTTGGCAAT | + |
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Preference number: 4 (lower is better) Translates to: LLNLRGESPHPTFISSFNCPSPL*SPSVGN Trigger: ATTGCCAACAGATGGGCTCCATAGAGGCGATGGGCA...ATTAAAGCTGCTTATGAAAGTGGGGTGTGGTGACTCACCCCTGAGATTCAGCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000076592.4 |
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| CDS-3UTR CCA 90 bp | TACTCCCTGAGTTCTCTTCACTGTCTCCACACATTTCTTCCCCGTAACTTCCCGGACAGGTTGACTTTGTaGAACTTCTCGGAGTCAGCC | + |
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Preference number: 4 (lower is better) Translates to: YSLSSLHCLHTFLPRNFPDRLTL*NFSESA Trigger: GGCTGACTCCGAGAAGTTCCACAAAGTCAACCTGTC...CGGGAAGTTACGGGGAAGAAATGTGTGGAGACAGTGAAGAGAACTCAGGGAGTA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076592.4 |
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| CDS-3UTR TCA 90 bp | TACTCCCTGAGTTCTCTTCACTGTCTCCACACATTTCTTCCCCGTAACTTCCCGGGCAATGCAGCCTTTTaGAAAACACCACTCTCTGCT | + |
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Preference number: 4 (lower is better) Translates to: YSLSSLHCLHTFLPRNFPGNAAF*KTPLSA Trigger: AGCAGAGAGTGGTGTTTTTCAAAAGGCTGCATTGCC...CGGGAAGTTACGGGGAAGAAATGTGTGGAGACAGTGAAGAGAACTCAGGGAGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000076592.4 |
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| CDS-3UTR GCA 90 bp | TCAGGTGCAGGGAACGTCTTGAGAGCTACTCACACAGTCACAAAGTTTCTGAGAATCTCAAGGATGGCCTaGTCCATGCTGCCTTTGTCT | + |
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Preference number: 4 (lower is better) Translates to: SGAGNVLRATHTVTKFLRISRMA*SMLPLS Trigger: AGACAAAGGCAGCATGGAGCAGGCCATCCTTGAGAT...TCTCAGAAACTTTGTGACTGTGTGAGTAGCTCTCAAGACGTTCCCTGCACCTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076592.4 |
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| CDS-3UTR GCA 90 bp | TGGCTTTTCAGGACAAGATTTCTCTGTGTAGCTCTGGCTGTCCTGGAATTCGCTCTCTCCTCCTTTTTCTaGAGGGCCTGCCTTTCTGTT | + |
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Preference number: 4 (lower is better) Translates to: WLFRTRFLCVALAVLEFALSSFF*RACLSV Trigger: AACAGAAAGGCAGGCCCTGCAGAAAAAGGAGGAGAG...AGCGAATTCCAGGACAGCCAGAGCTACACAGAGAAATCTTGTCCTGAAAAGCCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000076592.4 |
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| CDS-3UTR GCA 90 bp | CTGCTGAATCTCAGGGGTGAGTCACCACACCCCACTTTCATAAGCAGCTTTAATGATCTCTGGGGTTGTTaGTTCTTGCCTCTCCTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: LLNLRGESPHPTFISSFNDLWGC*FLPLLL Trigger: AAGGAGGAGAGGCAAGAAGCAACAACCCCAGAGATC...ATTAAAGCTGCTTATGAAAGTGGGGTGTGGTGACTCACCCCTGAGATTCAGCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000076592.4 |
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| CDS-3UTR CCA 90 bp | AAAGCCAGCCAAGGCTGCATAATAAACCTCTGTCTAATAGTGTACCCTGTAACACCCTTGCTGTCTGACTaGTCTCTCCCGTTCCTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: KASQGCIINLCLIVYPVTPLLSD*SLPFLP Trigger: TGGGAGGAACGGGAGAGACCAGTCAGACAGCAAGGG...TGTTACAGGGTACACTATTAGACAGAGGTTTATTATGCAGCCTTGGCTGGCTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076592.4 |
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| CDS-3UTR CCA 90 bp | CCAATGTTTTCACCAAGGACATACAGCCACTTTCTGATGCCTCACCACAGGCTACCTCTCTTTGATCTCTaGGGTTGTTGCTTCTTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: PMFSPRTYSHFLMPHHRLPLFDL*GCCFLP Trigger: AGGCAAGAAGCAACAACCCCAGAGATCAAAGAGAGG...TAGCCTGTGGTGAGGCATCAGAAAGTGGCTGTATGTCCTTGGTGAAAACATTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076592.4 |
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| CDS-3UTR TCA 90 bp | CTGCTGAATCTCAGGGGTGAGTCACCACACCCCACTTTCATAAGCAGCTTTAATCAAAATGTGACAGGTTaGCTTTGTGGAACTTCTCGG | + |
|
Preference number: 4 (lower is better) Translates to: LLNLRGESPHPTFISSFNQNVTG*LCGTSR Trigger: CCGAGAAGTTCCACAAAGTCAACCTGTCACATTTTG...ATTAAAGCTGCTTATGAAAGTGGGGTGTGGTGACTCACCCCTGAGATTCAGCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000076592.4 |
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| CDS-3UTR TCA 90 bp | TGGCTTTTCAGGACAAGATTTCTCTGTGTAGCTCTGGCTGTCCTGGAATTCGCTGTTCCTCCCAAAATGTaGCAGGTTGACTTTGTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: WLFRTRFLCVALAVLEFAVPPKM*QVDFVE Trigger: TTCCACAAAGTCAACCTGTCACATTTTGGGAGGAAC...AGCGAATTCCAGGACAGCCAGAGCTACACAGAGAAATCTTGTCCTGAAAAGCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000076592.4 |
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| CDS-3UTR GCA 90 bp | TGGCTTTTCAGGACAAGATTTCTCTGTGTAGCTCTGGCTGTCCTGGAATTCGCTAGTCAAAAGAACACATaGTTTGGGGCCCATATTCGG | + |
|
Preference number: 4 (lower is better) Translates to: WLFRTRFLCVALAVLEFASQKNT*FGAHIR Trigger: CCGAATATGGGCCCCAAAGCATGTGTTCTTTTGACT...AGCGAATTCCAGGACAGCCAGAGCTACACAGAGAAATCTTGTCCTGAAAAGCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000076592.4 |
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| CDS-3UTR CCA 90 bp | TCAGGTGCAGGGAACGTCTTGAGAGCTACTCACACAGTCACAAAGTTTCTGAGAGATCCAAAGAGGAACTaGGAATCACTGAGAGAACAG | + |
|
Preference number: 4 (lower is better) Translates to: SGAGNVLRATHTVTKFLRDPKRN*ESLREQ Trigger: CTGTTCTCTCAGTGATTCCCAGTTCCTCTTTGGATC...TCTCAGAAACTTTGTGACTGTGTGAGTAGCTCTCAAGACGTTCCCTGCACCTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076592.4 |
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| CDS-3UTR CCA 90 bp | TCAGGTGCAGGGAACGTCTTGAGAGCTACTCACACAGTCACAAAGTTTCTGAGAATGGAGCCCATCTGTTaGCAATGCAGCCTTTTGAAA | + |
|
Preference number: 4 (lower is better) Translates to: SGAGNVLRATHTVTKFLRMEPIC*QCSLLK Trigger: TTTCAAAAGGCTGCATTGCCAACAGATGGGCTCCAT...TCTCAGAAACTTTGTGACTGTGTGAGTAGCTCTCAAGACGTTCCCTGCACCTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076592.4 |
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| CDS-3UTR TCA 90 bp | TGGCTTTTCAGGACAAGATTTCTCTGTGTAGCTCTGGCTGTCCTGGAATTCGCTATGACTTCTGGAAAATaGGAAACAAAGCTGTGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: WLFRTRFLCVALAVLEFAMTSGK*ETKLCR Trigger: CCTGCACAGCTTTGTTTCTCATTTTCCAGAAGTCAT...AGCGAATTCCAGGACAGCCAGAGCTACACAGAGAAATCTTGTCCTGAAAAGCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000076592.4 |
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| CDS-3UTR TCA 90 bp | AAAGCCAGCCAAGGCTGCATAATAAACCTCTGTCTAATAGTGTACCCTGTAACAAGAGATGGTGAGGTCTaGGAGGTGCTGTCTTTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: KASQGCIINLCLIVYPVTRDGEV*EVLSFR Trigger: TCTGAAAGACAGCACCTCTCAGACCTCACCATCTCT...TGTTACAGGGTACACTATTAGACAGAGGTTTATTATGCAGCCTTGGCTGGCTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076592.4 |
||
| CDS-3UTR GCA 90 bp | AAAGCCAGCCAAGGCTGCATAATAAACCTCTGTCTAATAGTGTACCCTGTAACAGAGGGATGCTTTTCCTaGCTGGTAAAATGGAGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: KASQGCIINLCLIVYPVTEGCFS*LVKWRL Trigger: GAGCCTCCATTTTACCAGGCAGGAAAAGCATCCCTC...TGTTACAGGGTACACTATTAGACAGAGGTTTATTATGCAGCCTTGGCTGGCTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000076592.4 |
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| CDS-3UTR GCA 90 bp | TACTCCCTGAGTTCTCTTCACTGTCTCCACACATTTCTTCCCCGTAACTTCCCGAGAAATTATCATCGCTaGTATCAAAATCCGGGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: YSLSSLHCLHTFLPRNFPRNYHR*YQNPGH Trigger: GTGACCCGGATTTTGATAGCAGCGATGATAATTTCT...CGGGAAGTTACGGGGAAGAAATGTGTGGAGACAGTGAAGAGAACTCAGGGAGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000076592.4 |
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| CDS-3UTR GCA 90 bp | AGTCACAAAGTTTCTGAGAGTTCTTCTAAATTGTATCCCGTAAGGAAGCCAATGGTGAGGTCTGAGAGGTaGTGTCTTTCAGATGCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: SHKVSESSSKLYPVRKPMVRSER*CLSDAQ Trigger: CTGGGCATCTGAAAGACAGCACCTCTCAGACCTCAC...CATTGGCTTCCTTACGGGATACAATTTAGAAGAACTCTCAGAAACTTTGTGACT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076592.4 |
||
| CDS-3UTR GCA 90 bp | AGTCACAAAGTTTCTGAGAGTTCTTCTAAATTGTATCCCGTAAGGAAGCCAATGGGCTCCTCAGAGGGATaGTTTTCCTGCCTGGTAAAA | + |
|
Preference number: 4 (lower is better) Translates to: SHKVSESSSKLYPVRKPMGSSEG*FSCLVK Trigger: TTTTACCAGGCAGGAAAAGCATCCCTCTGAGGAGCC...CATTGGCTTCCTTACGGGATACAATTTAGAAGAACTCTCAGAAACTTTGTGACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076592.4 |
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| CDS-3UTR CCA 90 bp | TGGCTTTTCAGGACAAGATTTCTCTGTGTAGCTCTGGCTGTCCTGGAATTCGCTGAAAAGTCTTGGCTATaGTCTCCACAGAATCTAAAA | + |
|
Preference number: 4 (lower is better) Translates to: WLFRTRFLCVALAVLEFAEKSWL*SPQNLK Trigger: TTTTAGATTCTGTGGAGACCATAGCCAAGACTTTTC...AGCGAATTCCAGGACAGCCAGAGCTACACAGAGAAATCTTGTCCTGAAAAGCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000076592.4 |
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| CDS-3UTR CCA 90 bp | AGTCACAAAGTTTCTGAGAGTTCTTCTAAATTGTATCCCGTAAGGAAGCCAATGCCAGGCACAATGAGCTaGCTCAGGTTGTCACAAAAC | + |
|
Preference number: 4 (lower is better) Translates to: SHKVSESSSKLYPVRKPMPGTMS*LRLSQN Trigger: GTTTTGTGACAACCTGAGCCAGCTCATTGTGCCTGG...CATTGGCTTCCTTACGGGATACAATTTAGAAGAACTCTCAGAAACTTTGTGACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076592.4 |
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| CDS-3UTR TCA 90 bp | AGTCACAAAGTTTCTGAGAGTTCTTCTAAATTGTATCCCGTAAGGAAGCCAATGGGAACTGGGAATCACTaGGAGAACAGTCAGTCTGAT | + |
|
Preference number: 4 (lower is better) Translates to: SHKVSESSSKLYPVRKPMGTGNH*ENSQSD Trigger: ATCAGACTGACTGTTCTCTCAGTGATTCCCAGTTCC...CATTGGCTTCCTTACGGGATACAATTTAGAAGAACTCTCAGAAACTTTGTGACT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076592.4 |
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| CDS-3UTR CCA 90 bp | AAAGCCAGCCAAGGCTGCATAATAAACCTCTGTCTAATAGTGTACCCTGTAACATCTCTTGAAAAGTCTTaGCTATGGTCTCCACAGAAT | + |
|
Preference number: 4 (lower is better) Translates to: KASQGCIINLCLIVYPVTSLEKS*LWSPQN Trigger: ATTCTGTGGAGACCATAGCCAAGACTTTTCAAGAGA...TGTTACAGGGTACACTATTAGACAGAGGTTTATTATGCAGCCTTGGCTGGCTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076592.4 |
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| CDS-3UTR GCA 90 bp | AGTCACAAAGTTTCTGAGAGTTCTTCTAAATTGTATCCCGTAAGGAAGCCAATGAGGTTGTCACAAAACTaGTGCAAGTTCTTAGTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: SHKVSESSSKLYPVRKPMRLSQN*CKFLVC Trigger: GCAGACTAAGAACTTGCAGCAGTTTTGTGACAACCT...CATTGGCTTCCTTACGGGATACAATTTAGAAGAACTCTCAGAAACTTTGTGACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076592.4 |
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| CDS-3UTR GCA 90 bp | AAAGCCAGCCAAGGCTGCATAATAAACCTCTGTCTAATAGTGTACCCTGTAACATTTTCCACAGATGTCTaGAACTTGTTAATGACTTCT | + |
|
Preference number: 4 (lower is better) Translates to: KASQGCIINLCLIVYPVTFSTDV*NLLMTS Trigger: AGAAGTCATTAACAAGTTGCAGACATCTGTGGAAAA...TGTTACAGGGTACACTATTAGACAGAGGTTTATTATGCAGCCTTGGCTGGCTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076592.4 |
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| CDS-3UTR GCA 90 bp | AGTCACAAAGTTTCTGAGAGTTCTTCTAAATTGTATCCCGTAAGGAAGCCAATGTGCAAGTTCTTAGTCTaGTCCACAACTAAAACTTCA | + |
|
Preference number: 4 (lower is better) Translates to: SHKVSESSSKLYPVRKPMCKFLV*STTKTS Trigger: TGAAGTTTTAGTTGTGGAGCAGACTAAGAACTTGCA...CATTGGCTTCCTTACGGGATACAATTTAGAAGAACTCTCAGAAACTTTGTGACT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076592.4 |
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| CDS GCA 90 bp | GACACCACACTCCCCAGGCCTCTGGGAACTCGTACTGGGATTTCCTaGAGGAGCCTCCTGGGCCTGCCAAGTAGCTGGCTCCTCAGAGGG | + |
|
Preference number: 5 (lower is better) Translates to: DTTLPRPLGTRTGIS*RSLLGLPSSWLLRG Trigger: CCCTCTGAGGAGCCAGCTACTTGGCAGGCCCAGGAGGCTCCTGCAGGAAATCCCAGTACGAGTTCCCAGAGGCCTGGGGAGTGTGGTGTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076592.4 |
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| CDS CCA 90 bp | CCAGGCCTCTGGGAACTCGTACTGGGATTTCCTGCAGGAGCCTCCTaGGCCTGCCAAGTAGCTGGCTCCTCAGAGGGATGCTTTTCCTGC | + |
|
Preference number: 5 (lower is better) Translates to: PGLWELVLGFPAGAS*ACQVAGSSEGCFSC Trigger: GCAGGAAAAGCATCCCTCTGAGGAGCCAGCTACTTGGCAGGCCCAGGAGGCTCCTGCAGGAAATCCCAGTACGAGTTCCCAGAGGCCTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076592.4 |
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| CDS GCA 90 bp | CTCTGGGAACTCGTACTGGGATTTCCTGCAGGAGCCTCCTGGGCCTaGCAAGTAGCTGGCTCCTCAGAGGGATGCTTTTCCTGCCTGGTA | + |
|
Preference number: 5 (lower is better) Translates to: LWELVLGFPAGASWA*QVAGSSEGCFSCLV Trigger: TACCAGGCAGGAAAAGCATCCCTCTGAGGAGCCAGCTACTTGGCAGGCCCAGGAGGCTCCTGCAGGAAATCCCAGTACGAGTTCCCAGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076592.4 |
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| CDS CCA 90 bp | CGTACTGGGATTTCCTGCAGGAGCCTCCTGGGCCTGCCAAGTAGCTaGCTCCTCAGAGGGATGCTTTTCCTGCCTGGTAAAATGGAGGCT | + |
|
Preference number: 5 (lower is better) Translates to: RTGISCRSLLGLPSS*LLRGMLFLPGKMEA Trigger: AGCCTCCATTTTACCAGGCAGGAAAAGCATCCCTCTGAGGAGCCAGCTACTTGGCAGGCCCAGGAGGCTCCTGCAGGAAATCCCAGTACG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000076592.4 |
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| CDS TCA 90 bp | GCAGGCATTCTTCACTCTGGCTTCAAACTTACTTACGTCCCGCTGTaGAGCTCCTTGGGCCATCAGACCTTGGCCATTGCCAGCCCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: AGILHSGFKLTYVPL*SSLGHQTLAIASPL Trigger: CAGAGGGCTGGCAATGGCCAAGGTCTGATGGCCCAAGGAGCTTCACAGCGGGACGTAAGTAAGTTTGAAGCCAGAGTGAAGAATGCCTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076592.4 |
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| CDS GCA 90 bp | GGCGGCTCTAGGTTTTCAAGGCTGAGGTCACTGAACCAATTTATCTaGTGGTCTCCCTGGGAGCTGCTGTCTGTGGAAGAGCGCTGGGAA | + |
|
Preference number: 5 (lower is better) Translates to: GGSRFSRLRSLNQFI*WSPWELLSVEERWE Trigger: TTCCCAGCGCTCTTCCACAGACAGCAGCTCCCAGGGAGACCAGCAGATAAATTGGTTCAGTGACCTCAGCCTTGAAAACCTAGAGCCGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076592.4 |
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| CDS GCA 90 bp | TCTGCTTGTCTAGCTGCACATGTCCGCTGGATCTCAAGGATGGCCTaGTCCATGCTGCCTTTGTCTCTCACTGACTCAACCATCAGGTCG | + |
|
Preference number: 5 (lower is better) Translates to: SACLAAHVRWISRMA*SMLPLSLTDSTIRS Trigger: CGACCTGATGGTTGAGTCAGTGAGAGACAAAGGCAGCATGGAGCAGGCCATCCTTGAGATCCAGCGGACATGTGCAGCTAGACAAGCAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076592.4 |
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| CDS CCA 90 bp | TTTTCAAGGCTGAGGTCACTGAACCAATTTATCTGCTGGTCTCCCTaGGAGCTGCTGTCTGTGGAAGAGCGCTGGGAATGCTGCACGAGG | + |
|
Preference number: 5 (lower is better) Translates to: FSRLRSLNQFICWSP*ELLSVEERWECCTR Trigger: CCTCGTGCAGCATTCCCAGCGCTCTTCCACAGACAGCAGCTCCCAGGGAGACCAGCAGATAAATTGGTTCAGTGACCTCAGCCTTGAAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076592.4 |
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| CDS-3UTR CAA 90 bp | TTTTCCGGAGCTGAGGACCGAACCCAGGGCCTTGGGCTTGCTAGGCAAGCACTTTATGGAGCCCATCTGTaGGCAATGCAGCCTTTTGAA | + |
|
Preference number: 5 (lower is better) Translates to: FSGAEDRTQGLGLARQALYGAHL*AMQPFE Trigger: TTCAAAAGGCTGCATTGCCAACAGATGGGCTCCATA...AAGTGCTTGCCTAGCAAGCCCAAGGCCCTGGGTTCGGTCCTCAGCTCCGGAAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000076592.4 |
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| CDS-3UTR CAA 90 bp | TACTCCCTGAGTTCTCTTCACTGTCTCCACACATTTCTTCCCCGTAACTTCCCGATCAGACCTTGGCCATaGCCAGCCCTCTGGCTTGGG | + |
|
Preference number: 5 (lower is better) Translates to: YSLSSLHCLHTFLPRNFPIRPWP*PALWLG Trigger: CCCAAGCCAGAGGGCTGGCAATGGCCAAGGTCTGAT...CGGGAAGTTACGGGGAAGAAATGTGTGGAGACAGTGAAGAGAACTCAGGGAGTA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076592.4 |
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| CDS GCA 90 bp | GTTCTTCAGGGTGGATTTCATCTCCATAAATTCTGCTTGTCTAGCTaGACATGTCCGCTGGATCTCAAGGATGGCCTGCTCCATGCTGCC | + |
|
Preference number: 5 (lower is better) Translates to: VLQGGFHLHKFCLSS*TCPLDLKDGLLHAA Trigger: GGCAGCATGGAGCAGGCCATCCTTGAGATCCAGCGGACATGTGCAGCTAGACAAGCAGAATTTATGGAGATGAAATCCACCCTGAAGAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076592.4 |
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| CDS GCA 90 bp | TGCTTCCTATCTAGAAGCCCACCTCTCTTTGATCTCTGGGGTTGTTaGTTCTTGCCTCTCCTCCTTTTTCTGCAGGGCCTGCCTTTCTGT | + |
|
Preference number: 5 (lower is better) Translates to: CFLSRSPPLFDLWGC*FLPLLLFLQGLPFC Trigger: ACAGAAAGGCAGGCCCTGCAGAAAAAGGAGGAGAGGCAAGAAGCAACAACCCCAGAGATCAAAGAGAGGTGGGCTTCTAGATAGGAAGCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000076592.4 |
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| CDS GCA 90 bp | GTTCTTTACATGCCCATCGCCTCTATGGAGCCCATCTGTTGGCAATaGAGCCTTTTGAAAAACACCACTCTCTGCTCCTTCATCCCAGAC | + |
|
Preference number: 5 (lower is better) Translates to: VLYMPIASMEPICWQ*SLLKNTTLCSFIPD Trigger: GTCTGGGATGAAGGAGCAGAGAGTGGTGTTTTTCAAAAGGCTGCATTGCCAACAGATGGGCTCCATAGAGGCGATGGGCATGTAAAGAAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000076592.4 |
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| CDS-3UTR CAA 90 bp | AAAGCCAGCCAAGGCTGCATAATAAACCTCTGTCTAATAGTGTACCCTGTAACATTGGGCCATCAGACCTaGGCCATTGCCAGCCCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: KASQGCIINLCLIVYPVTLGHQT*AIASPL Trigger: CAGAGGGCTGGCAATGGCCAAGGTCTGATGGCCCAA...TGTTACAGGGTACACTATTAGACAGAGGTTTATTATGCAGCCTTGGCTGGCTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076592.4 |
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| CDS TCA 90 bp | CTCACTGACTCAACCATCAGGTCGTGCTGGACCCGTGCAGTCTCTTaGAAAGTCTTGGCTATGGTCTCCACAGAATCTAAAATAGACTGG | + |
|
Preference number: 5 (lower is better) Translates to: LTDSTIRSCWTRAVS*KVLAMVSTESKIDW Trigger: CCAGTCTATTTTAGATTCTGTGGAGACCATAGCCAAGACTTTTCAAGAGACTGCACGGGTCCAGCACGACCTGATGGTTGAGTCAGTGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076592.4 |
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| CDS CCA 90 bp | GGTCTTGTTCTTTACATGCCCATCGCCTCTATGGAGCCCATCTGTTaGCAATGCAGCCTTTTGAAAAACACCACTCTCTGCTCCTTCATC | + |
|
Preference number: 5 (lower is better) Translates to: GLVLYMPIASMEPIC*QCSLLKNTTLCSFI Trigger: GATGAAGGAGCAGAGAGTGGTGTTTTTCAAAAGGCTGCATTGCCAACAGATGGGCTCCATAGAGGCGATGGGCATGTAAAGAACAAGACC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000076592.4 |
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| CDS CCA 90 bp | TGTTCGGTTGCTGACTGTTCAAGTGAGTCAAAAGAACACATGCTTTaGGGCCCATATTCGGGGCAGGCATTCTTCACTCTGGCTTCAAAC | + |
|
Preference number: 5 (lower is better) Translates to: CSVADCSSESKEHML*GPYSGQAFFTLASN Trigger: GTTTGAAGCCAGAGTGAAGAATGCCTGCCCCGAATATGGGCCCCAAAGCATGTGTTCTTTTGACTCACTTGAACAGTCAGCAACCGAACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000076592.4 |
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| CDS-3UTR CAA 90 bp | TACTCCCTGAGTTCTCTTCACTGTCTCCACACATTTCTTCCCCGTAACTTCCCGTGGCAATGCAGCCTTTaGAAAAACACCACTCTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: YSLSSLHCLHTFLPRNFPWQCSL*KNTTLC Trigger: GCAGAGAGTGGTGTTTTTCAAAAGGCTGCATTGCCA...CGGGAAGTTACGGGGAAGAAATGTGTGGAGACAGTGAAGAGAACTCAGGGAGTA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000076592.4 |
||
| CDS TCA 90 bp | GCATCCAAGGACGGTAGCAGAGTCTCTGAATTTTCAGGACAGAACTaGGATCCAAAGAGGAACTGGGAATCACTGAGAGAACAGTCAGTC | + |
|
Preference number: 5 (lower is better) Translates to: ASKDGSRVSEFSGQN*DPKRNWESLREQSV Trigger: GACTGACTGTTCTCTCAGTGATTCCCAGTTCCTCTTTGGATCTCAGTTCTGTCCTGAAAATTCAGAGACTCTGCTACCGTCCTTGGATGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076592.4 |
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| CDS-3UTR CAA 90 bp | CTGCTGAATCTCAGGGGTGAGTCACCACACCCCACTTTCATAAGCAGCTTTAATCCAAAATGTGACAGGTaGACTTTGTGGAACTTCTCG | + |
|
Preference number: 5 (lower is better) Translates to: LLNLRGESPHPTFISSFNPKCDR*TLWNFS Trigger: CGAGAAGTTCCACAAAGTCAACCTGTCACATTTTGG...ATTAAAGCTGCTTATGAAAGTGGGGTGTGGTGACTCACCCCTGAGATTCAGCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000076592.4 |
||
| CDS GCA 90 bp | AGGATACCAGGCACAATGAGCTGGCTCAGGTTGTCACAAAACTGCTaGAAGTTCTTAGTCTGCTCCACAACTAAAACTTCAAGGTTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: RIPGTMSWLRLSQNC*KFLVCSTTKTSRFF Trigger: GAAGAACCTTGAAGTTTTAGTTGTGGAGCAGACTAAGAACTTGCAGCAGTTTTGTGACAACCTGAGCCAGCTCATTGTGCCTGGTATCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000076592.4 |
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| CDS GCA 90 bp | TCTAGGATACCAGGCACAATGAGCTGGCTCAGGTTGTCACAAAACTaGTGCAAGTTCTTAGTCTGCTCCACAACTAAAACTTCAAGGTTC | + |
|
Preference number: 5 (lower is better) Translates to: SRIPGTMSWLRLSQN*CKFLVCSTTKTSRF Trigger: GAACCTTGAAGTTTTAGTTGTGGAGCAGACTAAGAACTTGCAGCAGTTTTGTGACAACCTGAGCCAGCTCATTGTGCCTGGTATCCTAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000076592.4 |
||
| CDS-3UTR CAA 90 bp | CCAATGTTTTCACCAAGGACATACAGCCACTTTCTGATGCCTCACCACAGGCTAATCCACAGAATTCTGTaGTGTCTGTTTTGGGTGTCT | + |
|
Preference number: 5 (lower is better) Translates to: PMFSPRTYSHFLMPHHRLIHRIL*CLFWVS Trigger: AGACACCCAAAACAGACACAACAGAATTCTGTGGAT...TAGCCTGTGGTGAGGCATCAGAAAGTGGCTGTATGTCCTTGGTGAAAACATTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000076592.4 |
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| CDS-3UTR CAA 90 bp | GTACCAGTCAGGTGCAGGGAACGTCTTGAGAGCTACTCACACAGTCACAAAGTTATAAGCTTTCATCTTTaGTATCGCCTCCAAGCAACT | + |
|
Preference number: 5 (lower is better) Translates to: VPVRCRERLESYSHSHKVISFHL*YRLQAT Trigger: AGTTGCTTGGAGGCGATACAAAAGATGAAAGCTTAT...AACTTTGTGACTGTGTGAGTAGCTCTCAAGACGTTCCCTGCACCTGACTGGTAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076592.4 |
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| CDS-3UTR CAA 90 bp | TCAGGTGCAGGGAACGTCTTGAGAGCTACTCACACAGTCACAAAGTTTCTGAGATCTCCTCAAACTGTTTaGAGAGTCCTTTTGATTTCC | + |
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Preference number: 5 (lower is better) Translates to: SGAGNVLRATHTVTKFLRSPQTV*RVLLIS Trigger: GGAAATCAAAAGGACTCTCAAAACAGTTTGAGGAGA...TCTCAGAAACTTTGTGACTGTGTGAGTAGCTCTCAAGACGTTCCCTGCACCTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076592.4 |
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| CDS-3UTR CAA 90 bp | AGTCACAAAGTTTCTGAGAGTTCTTCTAAATTGTATCCCGTAAGGAAGCCAATGTGCTCCATGCTGCCTTaGTCTCTCACTGACTCAACC | + |
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Preference number: 5 (lower is better) Translates to: SHKVSESSSKLYPVRKPMCSMLP*SLTDST Trigger: GGTTGAGTCAGTGAGAGACAAAGGCAGCATGGAGCA...CATTGGCTTCCTTACGGGATACAATTTAGAAGAACTCTCAGAAACTTTGTGACT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076592.4 |
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| CDS-3UTR CAA 90 bp | AAAGCCAGCCAAGGCTGCATAATAAACCTCTGTCTAATAGTGTACCCTGTAACATCTGTTGTGTCTGTTTaGGGTGTCTTAAGCAAGCAC | + |
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Preference number: 5 (lower is better) Translates to: KASQGCIINLCLIVYPVTSVVSV*GVLSKH Trigger: GTGCTTGCTTAAGACACCCAAAACAGACACAACAGA...TGTTACAGGGTACACTATTAGACAGAGGTTTATTATGCAGCCTTGGCTGGCTTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076592.4 |
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| CDS-3UTR CAA 90 bp | AAAGCCAGCCAAGGCTGCATAATAAACCTCTGTCTAATAGTGTACCCTGTAACAGTTTTGAGAGTCCTTTaGATTTCCCAACTGGCAAAG | + |
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Preference number: 5 (lower is better) Translates to: KASQGCIINLCLIVYPVTVLRVL*ISQLAK Trigger: CTTTGCCAGTTGGGAAATCAAAAGGACTCTCAAAAC...TGTTACAGGGTACACTATTAGACAGAGGTTTATTATGCAGCCTTGGCTGGCTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076592.4 |
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| CDS TCA 90 bp | AGTCTGATTATTATTCCAGTTAGATGGTTTAGTGATCCCAGAGCCTaGGGGGATGCTGAGCATCTCTTTAACATTCCAGACATTAAAATT | + |
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Preference number: 5 (lower is better) Translates to: SLIIIPVRWFSDPRA*GDAEHLFNIPDIKI Trigger: AATTTTAATGTCTGGAATGTTAAAGAGATGCTCAGCATCCCCTCAGGCTCTGGGATCACTAAACCATCTAACTGGAATAATAATCAGACT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000076592.4 |
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| CDS-3UTR CAA 90 bp | AGTCACAAAGTTTCTGAGAGTTCTTCTAAATTGTATCCCGTAAGGAAGCCAATGACAGATGTCTGCAACTaGTTAATGACTTCTGGAAAA | + |
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Preference number: 5 (lower is better) Translates to: SHKVSESSSKLYPVRKPMTDVCN*LMTSGK Trigger: TTTTCCAGAAGTCATTAACAAGTTGCAGACATCTGT...CATTGGCTTCCTTACGGGATACAATTTAGAAGAACTCTCAGAAACTTTGTGACT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076592.4 |
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| CDS GCA 72 bp | CTCCCCAGGCCTCTGGGAACTCGTACTGGGATTTCCTaGAGGAGCCTCCTGGGCCTGCCAAGTAGCTGGCTC | + |
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Preference number: 6 (lower is better) Translates to: LPRPLGTRTGIS*RSLLGLPSSWL Trigger: GAGCCAGCTACTTGGCAGGCCCAGGAGGCTCCTGCAGGAAATCCCAGTACGAGTTCCCAGAGGCCTGGGGAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076592.4 |
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| CDS GCA 72 bp | CCCTGGGAGCTGCTGTCTGTGGAAGAGCGCTGGGAATaGTGCACGAGGTTCCCTTGTGCTGCCCTTGCTGTC | + |
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Preference number: 6 (lower is better) Translates to: PWELLSVEERWE*CTRFPCAALAV Trigger: GACAGCAAGGGCAGCACAAGGGAACCTCGTGCAGCATTCCCAGCGCTCTTCCACAGACAGCAGCTCCCAGGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076592.4 |
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| CDS CCA 72 bp | AGACACCACACTCCCCAGGCCTCTGGGAACTCGTACTaGGATTTCCTGCAGGAGCCTCCTGGGCCTGCCAAG | + |
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Preference number: 6 (lower is better) Translates to: RHHTPQASGNSY*DFLQEPPGPAK Trigger: CTTGGCAGGCCCAGGAGGCTCCTGCAGGAAATCCCAGTACGAGTTCCCAGAGGCCTGGGGAGTGTGGTGTCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076592.4 |
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| CDS GCA 72 bp | GGAAGAGCGCTGGGAATGCTGCACGAGGTTCCCTTGTaGTGCCCTTGCTGTCTGACTGGTCTCTCCCGTTCC | + |
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Preference number: 6 (lower is better) Translates to: GRALGMLHEVPL*CPCCLTGLSRS Trigger: GGAACGGGAGAGACCAGTCAGACAGCAAGGGCAGCACAAGGGAACCTCGTGCAGCATTCCCAGCGCTCTTCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076592.4 |
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| CDS CCA 72 bp | GCTCCTTCATCCCAGACACCACACTCCCCAGGCCTCTaGGAACTCGTACTGGGATTTCCTGCAGGAGCCTCC | + |
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Preference number: 6 (lower is better) Translates to: APSSQTPHSPGL*ELVLGFPAGAS Trigger: GGAGGCTCCTGCAGGAAATCCCAGTACGAGTTCCCAGAGGCCTGGGGAGTGTGGTGTCTGGGATGAAGGAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076592.4 |
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| CDS TCA 72 bp | GGCCCCTGTGGATCACACACTGGAGACTGGGGGCAGTaGTGCCTAGCTATGAAAGCACAGGCCGCCTTTGAG | + |
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Preference number: 6 (lower is better) Translates to: GPCGSHTGDWGQ*CLAMKAQAAFE Trigger: CTCAAAGGCGGCCTGTGCTTTCATAGCTAGGCATCACTGCCCCCAGTCTCCAGTGTGTGATCCACAGGGGCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000076592.4 |
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| CDS GCA 72 bp | CTCGTACTGGGATTTCCTGCAGGAGCCTCCTGGGCCTaGCAAGTAGCTGGCTCCTCAGAGGGATGCTTTTCC | + |
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Preference number: 6 (lower is better) Translates to: LVLGFPAGASWA*QVAGSSEGCFS Trigger: GGAAAAGCATCCCTCTGAGGAGCCAGCTACTTGGCAGGCCCAGGAGGCTCCTGCAGGAAATCCCAGTACGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076592.4 |
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| CDS GCA 72 bp | TCCTGGGCCTGCCAAGTAGCTGGCTCCTCAGAGGGATaGTTTTCCTGCCTGGTAAAATGGAGGCTCTGGGTC | + |
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Preference number: 6 (lower is better) Translates to: SWACQVAGSSEG*FSCLVKWRLWV Trigger: GACCCAGAGCCTCCATTTTACCAGGCAGGAAAAGCATCCCTCTGAGGAGCCAGCTACTTGGCAGGCCCAGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000076592.4 |
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| CDS CCA 72 bp | ATTTCCTGCAGGAGCCTCCTGGGCCTGCCAAGTAGCTaGCTCCTCAGAGGGATGCTTTTCCTGCCTGGTAAA | + |
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Preference number: 6 (lower is better) Translates to: ISCRSLLGLPSS*LLRGMLFLPGK Trigger: TTTACCAGGCAGGAAAAGCATCCCTCTGAGGAGCCAGCTACTTGGCAGGCCCAGGAGGCTCCTGCAGGAAAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076592.4 |
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| CDS CAA 72 bp | CGCTGGATCTCAAGGATGGCCTGCTCCATGCTGCCTTaGTCTCTCACTGACTCAACCATCAGGTCGTGCTGG | + |
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Preference number: 6 (lower is better) Translates to: RWISRMACSMLP*SLTDSTIRSCW Trigger: CCAGCACGACCTGATGGTTGAGTCAGTGAGAGACAAAGGCAGCATGGAGCAGGCCATCCTTGAGATCCAGCG 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076592.4 |
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| CDS GCA 72 bp | CTAGCTGCACATGTCCGCTGGATCTCAAGGATGGCCTaGTCCATGCTGCCTTTGTCTCTCACTGACTCAACC | + |
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Preference number: 6 (lower is better) Translates to: LAAHVRWISRMA*SMLPLSLTDST Trigger: GGTTGAGTCAGTGAGAGACAAAGGCAGCATGGAGCAGGCCATCCTTGAGATCCAGCGGACATGTGCAGCTAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076592.4 |
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| CDS CCA 72 bp | AATTTATCTGCTGGTCTCCCTGGGAGCTGCTGTCTGTaGAAGAGCGCTGGGAATGCTGCACGAGGTTCCCTT | + |
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Preference number: 6 (lower is better) Translates to: NLSAGLPGSCCL*KSAGNAARGSL Trigger: AAGGGAACCTCGTGCAGCATTCCCAGCGCTCTTCCACAGACAGCAGCTCCCAGGGAGACCAGCAGATAAATT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076592.4 |
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| CDS TCA 72 bp | CTTCACTCTGGCTTCAAACTTACTTACGTCCCGCTGTaGAGCTCCTTGGGCCATCAGACCTTGGCCATTGCC | + |
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Preference number: 6 (lower is better) Translates to: LHSGFKLTYVPL*SSLGHQTLAIA Trigger: GGCAATGGCCAAGGTCTGATGGCCCAAGGAGCTTCACAGCGGGACGTAAGTAAGTTTGAAGCCAGAGTGAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076592.4 |
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| CDS GCA 72 bp | CACATGTCCGCTGGATCTCAAGGATGGCCTGCTCCATaGTGCCTTTGTCTCTCACTGACTCAACCATCAGGT | + |
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Preference number: 6 (lower is better) Translates to: HMSAGSQGWPAP*CLCLSLTQPSG Trigger: ACCTGATGGTTGAGTCAGTGAGAGACAAAGGCAGCATGGAGCAGGCCATCCTTGAGATCCAGCGGACATGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076592.4 |
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| CDS GCA 72 bp | ATGCCCATCGCCTCTATGGAGCCCATCTGTTGGCAATaGAGCCTTTTGAAAAACACCACTCTCTGCTCCTTC | + |
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Preference number: 6 (lower is better) Translates to: MPIASMEPICWQ*SLLKNTTLCSF Trigger: GAAGGAGCAGAGAGTGGTGTTTTTCAAAAGGCTGCATTGCCAACAGATGGGCTCCATAGAGGCGATGGGCAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000076592.4 |
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| CDS CCA 72 bp | TCCATAAATTCTGCTTGTCTAGCTGCACATGTCCGCTaGATCTCAAGGATGGCCTGCTCCATGCTGCCTTTG | + |
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Preference number: 6 (lower is better) Translates to: SINSACLAAHVR*ISRMACSMLPL Trigger: CAAAGGCAGCATGGAGCAGGCCATCCTTGAGATCCAGCGGACATGTGCAGCTAGACAAGCAGAATTTATGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076592.4 |
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| CDS TCA 72 bp | CCTCTATGGAGCCCATCTGTTGGCAATGCAGCCTTTTaGAAAACACCACTCTCTGCTCCTTCATCCCAGACA | + |
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Preference number: 6 (lower is better) Translates to: PLWSPSVGNAAF*KTPLSAPSSQT Trigger: TGTCTGGGATGAAGGAGCAGAGAGTGGTGTTTTTCAAAAGGCTGCATTGCCAACAGATGGGCTCCATAGAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000076592.4 |
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| CDS TCA 72 bp | ACTGGTCTCTCCCGTTCCTCCCAAAATGTGACAGGTTaGCTTTGTGGAACTTCTCGGAGTCAGCCAACAGAT | + |
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Preference number: 6 (lower is better) Translates to: TGLSRSSQNVTG*LCGTSRSQPTD Trigger: ATCTGTTGGCTGACTCCGAGAAGTTCCACAAAGTCAACCTGTCACATTTTGGGAGGAACGGGAGAGACCAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076592.4 |
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| CDS GCA 72 bp | GGTGGATTTCATCTCCATAAATTCTGCTTGTCTAGCTaGACATGTCCGCTGGATCTCAAGGATGGCCTGCTC | + |
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Preference number: 6 (lower is better) Translates to: GGFHLHKFCLSS*TCPLDLKDGLL Trigger: GAGCAGGCCATCCTTGAGATCCAGCGGACATGTGCAGCTAGACAAGCAGAATTTATGGAGATGAAATCCACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076592.4 |
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| CDS CCA 72 bp | CTTTACATGCCCATCGCCTCTATGGAGCCCATCTGTTaGCAATGCAGCCTTTTGAAAAACACCACTCTCTGC | + |
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Preference number: 6 (lower is better) Translates to: LYMPIASMEPIC*QCSLLKNTTLC Trigger: GCAGAGAGTGGTGTTTTTCAAAAGGCTGCATTGCCAACAGATGGGCTCCATAGAGGCGATGGGCATGTAAAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000076592.4 |
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| CDS CCA 72 bp | GCTGACTGTTCAAGTGAGTCAAAAGAACACATGCTTTaGGGCCCATATTCGGGGCAGGCATTCTTCACTCTG | + |
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Preference number: 6 (lower is better) Translates to: ADCSSESKEHML*GPYSGQAFFTL Trigger: CAGAGTGAAGAATGCCTGCCCCGAATATGGGCCCCAAAGCATGTGTTCTTTTGACTCACTTGAACAGTCAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000076592.4 |
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| CDS CAA 90 bp | CGGTCTTGTTCTTTACATGCCCATCGCCTCTATGGAGCCCATCTGTaGGCAATGCAGCCTTTTGAAAAACACCACTCTCTGCTCCTTCAT | + |
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Preference number: 6 (lower is better) Translates to: RSCSLHAHRLYGAHL*AMQPFEKHHSLLLH Trigger: ATGAAGGAGCAGAGAGTGGTGTTTTTCAAAAGGCTGCATTGCCAACAGATGGGCTCCATAGAGGCGATGGGCATGTAAAGAACAAGACCG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000076592.4 |
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| CDS CAA 72 bp | TCTTCTAGGATACCAGGCACAATGAGCTGGCTCAGGTaGTCACAAAACTGCTGCAAGTTCTTAGTCTGCTCC | + |
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Preference number: 6 (lower is better) Translates to: SSRIPGTMSWLR*SQNCCKFLVCS Trigger: GGAGCAGACTAAGAACTTGCAGCAGTTTTGTGACAACCTGAGCCAGCTCATTGTGCCTGGTATCCTAGAAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076592.4 |
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| CDS CAA 72 bp | TCTTTACATGCCCATCGCCTCTATGGAGCCCATCTGTaGGCAATGCAGCCTTTTGAAAAACACCACTCTCTG | + |
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Preference number: 6 (lower is better) Translates to: SLHAHRLYGAHL*AMQPFEKHHSL Trigger: CAGAGAGTGGTGTTTTTCAAAAGGCTGCATTGCCAACAGATGGGCTCCATAGAGGCGATGGGCATGTAAAGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000076592.4 |
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| CDS CAA 72 bp | TCCTCCTTTTTCTGCAGGGCCTGCCTTTCTGTTCGGTaGCTGACTGTTCAAGTGAGTCAAAAGAACACATGC | + |
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Preference number: 6 (lower is better) Translates to: SSFFCRACLSVR*LTVQVSQKNTC Trigger: GCATGTGTTCTTTTGACTCACTTGAACAGTCAGCAACCGAACAGAAAGGCAGGCCCTGCAGAAAAAGGAGGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000076592.4 |
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| CDS CAA 90 bp | AACTTCAAGGTTCTTCAGGGTGGATTTCATCTCCATAAATTCTGCTaGTCTAGCTGCACATGTCCGCTGGATCTCAAGGATGGCCTGCTC | + |
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Preference number: 6 (lower is better) Translates to: NFKVLQGGFHLHKFC*SSCTCPLDLKDGLL Trigger: GAGCAGGCCATCCTTGAGATCCAGCGGACATGTGCAGCTAGACAAGCAGAATTTATGGAGATGAAATCCACCCTGAAGAACCTTGAAGTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076592.4 |
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| CDS GCA 72 bp | CCAGGCACAATGAGCTGGCTCAGGTTGTCACAAAACTaGTGCAAGTTCTTAGTCTGCTCCACAACTAAAACT | + |
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Preference number: 6 (lower is better) Translates to: PGTMSWLRLSQN*CKFLVCSTTKT Trigger: AGTTTTAGTTGTGGAGCAGACTAAGAACTTGCAGCAGTTTTGTGACAACCTGAGCCAGCTCATTGTGCCTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000076592.4 |
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| CDS TCA 72 bp | GACGGTAGCAGAGTCTCTGAATTTTCAGGACAGAACTaGGATCCAAAGAGGAACTGGGAATCACTGAGAGAA | + |
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Preference number: 6 (lower is better) Translates to: DGSRVSEFSGQN*DPKRNWESLRE Trigger: TTCTCTCAGTGATTCCCAGTTCCTCTTTGGATCTCAGTTCTGTCCTGAAAATTCAGAGACTCTGCTACCGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076592.4 |
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| CDS GCA 72 bp | AAGGTTCTTCAGGGTGGATTTCATCTCCATAAATTCTaGTTGTCTAGCTGCACATGTCCGCTGGATCTCAAG | + |
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Preference number: 6 (lower is better) Translates to: KVLQGGFHLHKF*LSSCTCPLDLK Trigger: CTTGAGATCCAGCGGACATGTGCAGCTAGACAAGCAGAATTTATGGAGATGAAATCCACCCTGAAGAACCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076592.4 |
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| CDS GCA 72 bp | GGCACAATGAGCTGGCTCAGGTTGTCACAAAACTGCTaGAAGTTCTTAGTCTGCTCCACAACTAAAACTTCA | + |
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Preference number: 6 (lower is better) Translates to: GTMSWLRLSQNC*KFLVCSTTKTS Trigger: TGAAGTTTTAGTTGTGGAGCAGACTAAGAACTTGCAGCAGTTTTGTGACAACCTGAGCCAGCTCATTGTGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000076592.4 |
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| CDS CAA 72 bp | GTTCTTCAGGGTGGATTTCATCTCCATAAATTCTGCTaGTCTAGCTGCACATGTCCGCTGGATCTCAAGGAT | + |
|
Preference number: 6 (lower is better) Translates to: VLQGGFHLHKFC*SSCTCPLDLKD Trigger: ATCCTTGAGATCCAGCGGACATGTGCAGCTAGACAAGCAGAATTTATGGAGATGAAATCCACCCTGAAGAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076592.4 |
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| CDS TCA 72 bp | ATTATTCCAGTTAGATGGTTTAGTGATCCCAGAGCCTaGGGGGATGCTGAGCATCTCTTTAACATTCCAGAC | + |
|
Preference number: 6 (lower is better) Translates to: IIPVRWFSDPRA*GDAEHLFNIPD Trigger: GTCTGGAATGTTAAAGAGATGCTCAGCATCCCCTCAGGCTCTGGGATCACTAAACCATCTAACTGGAATAAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000076592.4 |
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| CDS CCA 72 bp | TTTTTCAGCTCTTCTAGGATACCAGGCACAATGAGCTaGCTCAGGTTGTCACAAAACTGCTGCAAGTTCTTA | + |
|
Preference number: 6 (lower is better) Translates to: FFSSSRIPGTMS*LRLSQNCCKFL Trigger: TAAGAACTTGCAGCAGTTTTGTGACAACCTGAGCCAGCTCATTGTGCCTGGTATCCTAGAAGAGCTGAAAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000076592.4 |
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| CDS TCA 72 bp | ACAGATGTCTGCAACTTGTTAATGACTTCTGGAAAATaGGAAACAAAGCTGTGCAGGGTCTCACTGTCAGAT | + |
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Preference number: 6 (lower is better) Translates to: TDVCNLLMTSGK*ETKLCRVSLSD Trigger: ATCTGACAGTGAGACCCTGCACAGCTTTGTTTCTCATTTTCCAGAAGTCATTAACAAGTTGCAGACATCTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076592.4 |
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