Pregenerated sensors for IGSF6 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000035004Ensembl transcript IDs: ENSMUST00000047194.4
Found 77 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GTACAACCCAAGTTGTTTCCTATACCTCAGCTGGAGAATGTTCACTaGCCACTGCTCCGTTACAGTATCAGAAGAAATCACTTTTGTTCC | + |
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Preference number: 1 (lower is better) Translates to: VQPKLFPIPQLENVH*PLLRYSIRRNHFCS Trigger: GGAACAAAAGTGATTTCTTCTGATACTGTAACGGAGCAGTGGGCAGTGAACATTCTCCAGCTGAGGTATAGGAAACAACTTGGGTTGTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047194.4 |
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| 3UTR CCA 90 bp | TTGTTTTGTTGGTGGTACAACCCAAGTTGTTTCCTATACCTCAGCTaGAGAATGTTCACTGCCCACTGCTCCGTTACAGTATCAGAAGAA | + |
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Preference number: 1 (lower is better) Translates to: LFCWWYNPSCFLYLS*RMFTAHCSVTVSEE Trigger: TTCTTCTGATACTGTAACGGAGCAGTGGGCAGTGAACATTCTCCAGCTGAGGTATAGGAAACAACTTGGGTTGTACCACCAACAAAACAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047194.4 |
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| 3UTR GCA 90 bp | CCAAGTTGTTTCCTATACCTCAGCTGGAGAATGTTCACTGCCCACTaGTCCGTTACAGTATCAGAAGAAATCACTTTTGTTCCAAGATAC | + |
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Preference number: 1 (lower is better) Translates to: PSCFLYLSWRMFTAH*SVTVSEEITFVPRY Trigger: GTATCTTGGAACAAAAGTGATTTCTTCTGATACTGTAACGGAGCAGTGGGCAGTGAACATTCTCCAGCTGAGGTATAGGAAACAACTTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047194.4 |
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| 3UTR CCA 90 bp | CTGTTTATAGTCGTCCTCTGGTCTCTTGTAGTATTGTTTTGTTGGTaGTACAACCCAAGTTGTTTCCTATACCTCAGCTGGAGAATGTTC | + |
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Preference number: 1 (lower is better) Translates to: LFIVVLWSLVVLFCW*YNPSCFLYLSWRMF Trigger: GAACATTCTCCAGCTGAGGTATAGGAAACAACTTGGGTTGTACCACCAACAAAACAATACTACAAGAGACCAGAGGACGACTATAAACAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047194.4 |
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| 3UTR CCA 90 bp | TTCCTGTTTATAGTCGTCCTCTGGTCTCTTGTAGTATTGTTTTGTTaGTGGTACAACCCAAGTTGTTTCCTATACCTCAGCTGGAGAATG | + |
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Preference number: 1 (lower is better) Translates to: FLFIVVLWSLVVLFC*WYNPSCFLYLSWRM Trigger: CATTCTCCAGCTGAGGTATAGGAAACAACTTGGGTTGTACCACCAACAAAACAATACTACAAGAGACCAGAGGACGACTATAAACAGGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047194.4 |
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| 3UTR TCA 90 bp | GGAAAGTATTTATTTCCCCTCAGAACTGAGATCTGTGGTTTAACTTaGAGCCTTCTCTCAGTTAATGCCTATCACACATCTAGTATGTTG | + |
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Preference number: 1 (lower is better) Translates to: GKYLFPLRTEICGLT*SLLSVNAYHTSSML Trigger: CAACATACTAGATGTGTGATAGGCATTAACTGAGAGAAGGCTTCAAGTTAAACCACAGATCTCAGTTCTGAGGGGAAATAAATACTTTCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047194.4 |
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| 3UTR TCA 90 bp | ACAGTATCAGAAGAAATCACTTTTGTTCCAAGATACTGTTCACAATaGGTTTCTCTTACTCAGAAATTGCTCTTCTCCTTACTCCTTTTG | + |
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Preference number: 1 (lower is better) Translates to: TVSEEITFVPRYCSQ*VSLTQKLLFSLLLL Trigger: CAAAAGGAGTAAGGAGAAGAGCAATTTCTGAGTAAGAGAAACTCATTGTGAACAGTATCTTGGAACAAAAGTGATTTCTTCTGATACTGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047194.4 |
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| 3UTR-3UTR CCA 90 bp | GATCAGGCTGGCCTTGAACTCAGAAATTCACCTGCCTCTGCCTCCTTAGTGTTATTCCTATACCTCAGCTaGAGAATGTTCACTGCCCAC | + |
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Preference number: 2 (lower is better) Translates to: DQAGLELRNSPASASLVLFLYLS*RMFTAH Trigger: GTGGGCAGTGAACATTCTCCAGCTGAGGTATAGGAA...TAACACTAAGGAGGCAGAGGCAGGTGAATTTCTGAGTTCAAGGCCAGCCTGATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047194.4 |
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| 3UTR-3UTR CCA 90 bp | CTTATGCTCTGCCGTCTGGCGAGGCCGGCTGTTTTCCCACTTGTCCTGTCCTTTTATACTTCACAATGTTaGGAATACAGGCTTGTTTCA | + |
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Preference number: 2 (lower is better) Translates to: LMLCRLARPAVFPLVLSFYTSQC*EYRLVS Trigger: TGAAACAAGCCTGTATTCCCAACATTGTGAAGTATA...AAAGGACAGGACAAGTGGGAAAACAGCCGGCCTCGCCAGACGGCAGAGCATAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047194.4 |
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| 3UTR-3UTR TCA 90 bp | TATACCTCAGCTGGAGAATGTTCACTGCCCACTGCTCCGTTACAGTATCAGAAGGCTTTTGAGACAAGATaGTGTGTCTCTGACTTCAGG | + |
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Preference number: 2 (lower is better) Translates to: YTSAGECSLPTAPLQYQKAFETR*CVSDFR Trigger: CCTGAAGTCAGAGACACATCATCTTGTCTCAAAAGC...CTTCTGATACTGTAACGGAGCAGTGGGCAGTGAACATTCTCCAGCTGAGGTATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047194.4 |
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| 3UTR-3UTR TCA 90 bp | GATCAGGCTGGCCTTGAACTCAGAAATTCACCTGCCTCTGCCTCCTTAGTGTTAGTATGTTGGGTAGACTaGCAACATAAACATGGTAAC | + |
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Preference number: 2 (lower is better) Translates to: DQAGLELRNSPASASLVLVCWVD*QHKHGN Trigger: GTTACCATGTTTATGTTGTCAGTCTACCCAACATAC...TAACACTAAGGAGGCAGAGGCAGGTGAATTTCTGAGTTCAAGGCCAGCCTGATC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047194.4 |
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| 3UTR-3UTR GCA 90 bp | GGGCTGCAGTTCTTTGGTACCACACTGACATCTAGAGTCAGTTGTCTGCATTCCTCTCCTTACTCCTTTTaGCCTTCTCACTTGATTCTA | + |
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Preference number: 2 (lower is better) Translates to: GLQFFGTTLTSRVSCLHSSPYSF*PSHLIL Trigger: TAGAATCAAGTGAGAAGGGCAAAAGGAGTAAGGAGA...GGAATGCAGACAACTGACTCTAGATGTCAGTGTGGTACCAAAGAACTGCAGCCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047194.4 |
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| 3UTR CAA 90 bp | GGGTTTCCTGTTTATAGTCGTCCTCTGGTCTCTTGTAGTATTGTTTaGTTGGTGGTACAACCCAAGTTGTTTCCTATACCTCAGCTGGAG | + |
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Preference number: 2 (lower is better) Translates to: GFPVYSRPLVSCSIV*LVVQPKLFPIPQLE Trigger: CTCCAGCTGAGGTATAGGAAACAACTTGGGTTGTACCACCAACAAAACAATACTACAAGAGACCAGAGGACGACTATAAACAGGAAACCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047194.4 |
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| 3UTR CAA 90 bp | GCTTTGGGTTTCCTGTTTATAGTCGTCCTCTGGTCTCTTGTAGTATaGTTTTGTTGGTGGTACAACCCAAGTTGTTTCCTATACCTCAGC | + |
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Preference number: 2 (lower is better) Translates to: ALGFLFIVVLWSLVV*FCWWYNPSCFLYLS Trigger: GCTGAGGTATAGGAAACAACTTGGGTTGTACCACCAACAAAACAATACTACAAGAGACCAGAGGACGACTATAAACAGGAAACCCAAAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047194.4 |
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| 3UTR CAA 90 bp | AACTGTACTAGACCTGTGATCAAGTTAGTGAGCAGTGTGTCCTTGTaGGTACTTATATTCAAAGAACAATCCATGTCAAGCCCCCACTCC | + |
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Preference number: 2 (lower is better) Translates to: NCTRPVIKLVSSVSL*VLIFKEQSMSSPHS Trigger: GGAGTGGGGGCTTGACATGGATTGTTCTTTGAATATAAGTACCAACAAGGACACACTGCTCACTAACTTGATCACAGGTCTAGTACAGTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047194.4 |
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| 3UTR CAA 90 bp | TTTCCTGTTTATAGTCGTCCTCTGGTCTCTTGTAGTATTGTTTTGTaGGTGGTACAACCCAAGTTGTTTCCTATACCTCAGCTGGAGAAT | + |
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Preference number: 2 (lower is better) Translates to: FPVYSRPLVSCSIVL*VVQPKLFPIPQLEN Trigger: ATTCTCCAGCTGAGGTATAGGAAACAACTTGGGTTGTACCACCAACAAAACAATACTACAAGAGACCAGAGGACGACTATAAACAGGAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047194.4 |
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| 3UTR-3UTR TCA 90 bp | TTGTTGGTACTTATATTCAAAGAACAATCCATGTCAAGCCCCCACTCCCTTTTTTCTTTGATGTTGTCTTaGTTGCTGTATGTCCATTCA | + |
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Preference number: 2 (lower is better) Translates to: LLVLIFKEQSMSSPHSLFSLMLS*LLYVHS Trigger: TGAATGGACATACAGCAATCAAGACAACATCAAAGA...AAAAAGGGAGTGGGGGCTTGACATGGATTGTTCTTTGAATATAAGTACCAACAA 38% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt. Matches the following 1 transcripts: ENSMUST00000047194.4 |
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| 3UTR CCA 72 bp | GCTACAATTAGTGACAGCTACTTATGCTCTGCCGTCTaGCGAGGCCGGCTGTTTTCCCACTTGTCCTGTCCT | + |
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Preference number: 3 (lower is better) Translates to: ATISDSYLCSAV*RGRLFSHLSCP Trigger: AGGACAGGACAAGTGGGAAAACAGCCGGCCTCGCCAGACGGCAGAGCATAAGTAGCTGTCACTAATTGTAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047194.4 |
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| 3UTR CCA 72 bp | TGGTGGTACAACCCAAGTTGTTTCCTATACCTCAGCTaGAGAATGTTCACTGCCCACTGCTCCGTTACAGTA | + |
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Preference number: 3 (lower is better) Translates to: WWYNPSCFLYLS*RMFTAHCSVTV Trigger: TACTGTAACGGAGCAGTGGGCAGTGAACATTCTCCAGCTGAGGTATAGGAAACAACTTGGGTTGTACCACCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047194.4 |
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| 3UTR CCA 72 bp | GGGAATACAGGCTTGTTTCACTTTGATGAGTTTATGTaGTGCTGGGGATCAAAGCTAGGGCTTTGTGCCTAC | + |
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Preference number: 3 (lower is better) Translates to: GNTGLFHFDEFM*CWGSKLGLCAY Trigger: GTAGGCACAAAGCCCTAGCTTTGATCCCCAGCACCACATAAACTCATCAAAGTGAAACAAGCCTGTATTCCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047194.4 |
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| 3UTR-3UTR CAA 90 bp | TATACCTCAGCTGGAGAATGTTCACTGCCCACTGCTCCGTTACAGTATCAGAAGCAGGCTTGTTTCACTTaGATGAGTTTATGTGGTGCT | + |
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Preference number: 3 (lower is better) Translates to: YTSAGECSLPTAPLQYQKQACFT*MSLCGA Trigger: AGCACCACATAAACTCATCAAAGTGAAACAAGCCTG...CTTCTGATACTGTAACGGAGCAGTGGGCAGTGAACATTCTCCAGCTGAGGTATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047194.4 |
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| 3UTR CCA 72 bp | GTCGTCCTCTGGTCTCTTGTAGTATTGTTTTGTTGGTaGTACAACCCAAGTTGTTTCCTATACCTCAGCTGG | + |
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Preference number: 3 (lower is better) Translates to: VVLWSLVVLFCW*YNPSCFLYLSW Trigger: CCAGCTGAGGTATAGGAAACAACTTGGGTTGTACCACCAACAAAACAATACTACAAGAGACCAGAGGACGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047194.4 |
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| 3UTR-3UTR CAA 90 bp | AACCCAAGTTGTTTCCTATACCTCAGCTGGAGAATGTTCACTGCCCACTGCTCCTTATACTTCACAATGTaGGGAATACAGGCTTGTTTC | + |
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Preference number: 3 (lower is better) Translates to: NPSCFLYLSWRMFTAHCSLYFTM*GIQACF Trigger: GAAACAAGCCTGTATTCCCAACATTGTGAAGTATAA...GGAGCAGTGGGCAGTGAACATTCTCCAGCTGAGGTATAGGAAACAACTTGGGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047194.4 |
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| 3UTR GCA 72 bp | AAGTTGTTTCCTATACCTCAGCTGGAGAATGTTCACTaGCCACTGCTCCGTTACAGTATCAGAAGAAATCAC | + |
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Preference number: 3 (lower is better) Translates to: KLFPIPQLENVH*PLLRYSIRRNH Trigger: GTGATTTCTTCTGATACTGTAACGGAGCAGTGGGCAGTGAACATTCTCCAGCTGAGGTATAGGAAACAACTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047194.4 |
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| 3UTR GCA 72 bp | CTGTATGTCCATTCACATTGCCGTAGATTCTGGAGTTaGACTGTCAGTGGCTTAAGTAAAAAGCAAGCACAT | + |
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Preference number: 3 (lower is better) Translates to: LYVHSHCRRFWS*TVSGLSKKQAH Trigger: ATGTGCTTGCTTTTTACTTAAGCCACTGACAGTGCAACTCCAGAATCTACGGCAATGTGAATGGACATACAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047194.4 |
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| 3UTR GCA 72 bp | TTCCTATACCTCAGCTGGAGAATGTTCACTGCCCACTaGTCCGTTACAGTATCAGAAGAAATCACTTTTGTT | + |
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Preference number: 3 (lower is better) Translates to: FLYLSWRMFTAH*SVTVSEEITFV Trigger: AACAAAAGTGATTTCTTCTGATACTGTAACGGAGCAGTGGGCAGTGAACATTCTCCAGCTGAGGTATAGGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047194.4 |
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| 3UTR CCA 72 bp | ATAGTCGTCCTCTGGTCTCTTGTAGTATTGTTTTGTTaGTGGTACAACCCAAGTTGTTTCCTATACCTCAGC | + |
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Preference number: 3 (lower is better) Translates to: IVVLWSLVVLFC*WYNPSCFLYLS Trigger: GCTGAGGTATAGGAAACAACTTGGGTTGTACCACCAACAAAACAATACTACAAGAGACCAGAGGACGACTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047194.4 |
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| 3UTR TCA 72 bp | TTTCTTTTGGTGGTCACGGTTGCTTTTGAGACAAGATaGTGTGTCTCTGACTTCAGGTTAATCCTATACTCA | + |
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Preference number: 3 (lower is better) Translates to: FLLVVTVAFETR*CVSDFRLILYS Trigger: TGAGTATAGGATTAACCTGAAGTCAGAGACACATCATCTTGTCTCAAAAGCAACCGTGACCACCAAAAGAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047194.4 |
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| 3UTR TCA 72 bp | TTATTTCCCCTCAGAACTGAGATCTGTGGTTTAACTTaGAGCCTTCTCTCAGTTAATGCCTATCACACATCT | + |
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Preference number: 3 (lower is better) Translates to: LFPLRTEICGLT*SLLSVNAYHTS Trigger: AGATGTGTGATAGGCATTAACTGAGAGAAGGCTTCAAGTTAAACCACAGATCTCAGTTCTGAGGGGAAATAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047194.4 |
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| 3UTR-3UTR CAA 90 bp | CAGAAGAAATCACTTTTGTTCCAAGATACTGTTCACAATGAGTTTCTCTTACTCTGGTCACGGTTGCTTTaGAGACAAGATGATGTGTCT | + |
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Preference number: 3 (lower is better) Translates to: QKKSLLFQDTVHNEFLLLWSRLL*RQDDVS Trigger: AGACACATCATCTTGTCTCAAAAGCAACCGTGACCA...GAGTAAGAGAAACTCATTGTGAACAGTATCTTGGAACAAAAGTGATTTCTTCTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047194.4 |
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| 3UTR-3UTR CAA 90 bp | TTGTTGGTACTTATATTCAAAGAACAATCCATGTCAAGCCCCCACTCCCTTTTTTGGTCTCTTGTAGTATaGTTTTGTTGGTGGTACAAC | + |
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Preference number: 3 (lower is better) Translates to: LLVLIFKEQSMSSPHSLFWSLVV*FCWWYN Trigger: GTTGTACCACCAACAAAACAATACTACAAGAGACCA...AAAAAGGGAGTGGGGGCTTGACATGGATTGTTCTTTGAATATAAGTACCAACAA 39% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000047194.4 |
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| 3UTR TCA 72 bp | TTACAACTCAGGAAAGTATTTATTTCCCCTCAGAACTaGGATCTGTGGTTTAACTTGAAGCCTTCTCTCAGT | + |
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Preference number: 3 (lower is better) Translates to: LQLRKVFISPQN*DLWFNLKPSLS Trigger: ACTGAGAGAAGGCTTCAAGTTAAACCACAGATCTCAGTTCTGAGGGGAAATAAATACTTTCCTGAGTTGTAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047194.4 |
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| CDS-3UTR CCA 90 bp | GATCAGGCTGGCCTTGAACTCAGAAATTCACCTGCCTCTGCCTCCTTAGTGTTACCACAAGCTCTTTGGTaGCACTGGAGGGCATCCAAC | + |
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Preference number: 4 (lower is better) Translates to: DQAGLELRNSPASASLVLPQALW*HWRASN Trigger: GTTGGATGCCCTCCAGTGCCACCAAAGAGCTTGTGG...TAACACTAAGGAGGCAGAGGCAGGTGAATTTCTGAGTTCAAGGCCAGCCTGATC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047194.4 |
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| CDS-3UTR TCA 90 bp | GGGCTGCAGTTCTTTGGTACCACACTGACATCTAGAGTCAGTTGTCTGCATTCCTGCGCACCTCCTTGCTaGAAAGTCTTTCTCTTACCA | + |
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Preference number: 4 (lower is better) Translates to: GLQFFGTTLTSRVSCLHSCAPPC*KVFLLP Trigger: TGGTAAGAGAAAGACTTTTCAGCAAGGAGGTGCGCA...GGAATGCAGACAACTGACTCTAGATGTCAGTGTGGTACCAAAGAACTGCAGCCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047194.4 |
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| CDS-3UTR CCA 90 bp | GGGCTGCAGTTCTTTGGTACCACACTGACATCTAGAGTCAGTTGTCTGCATTCCAATTGCACTGTCATTTaGAGACAGCCTGTTAACAGT | + |
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Preference number: 4 (lower is better) Translates to: GLQFFGTTLTSRVSCLHSNCTVI*RQPVNS Trigger: ACTGTTAACAGGCTGTCTCCAAATGACAGTGCAATT...GGAATGCAGACAACTGACTCTAGATGTCAGTGTGGTACCAAAGAACTGCAGCCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047194.4 |
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| CDS-3UTR TCA 90 bp | TCAGTTGTCTGCATTCCTGAGGCATTTCTGATAGGCTTTGGGTTTCCTGTTTATGTGTTTAGCGCTTGGTaGCAGTTCATTGGGAAATGC | + |
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Preference number: 4 (lower is better) Translates to: SVVCIPEAFLIGFGFPVYVFSAW*QFIGKC Trigger: GCATTTCCCAATGAACTGTCACCAAGCGCTAAACAC...ATAAACAGGAAACCCAAAGCCTATCAGAAATGCCTCAGGAATGCAGACAACTGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047194.4 |
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| CDS-3UTR CCA 90 bp | GATGACCTTGAACTTCTGACTCTTTATACTTCACAATGTTGGGAATACAGGCTTGCTCTTTGGTGGCACTaGAGGGCATCCAACTGTAGA | + |
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Preference number: 4 (lower is better) Translates to: DDLELLTLYTSQCWEYRLALWWH*RASNCR Trigger: TCTACAGTTGGATGCCCTCCAGTGCCACCAAAGAGC...AAGCCTGTATTCCCAACATTGTGAAGTATAAAGAGTCAGAAGTTCAAGGTCATC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047194.4 |
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| CDS-3UTR GCA 90 bp | AACCCAAGTTGTTTCCTATACCTCAGCTGGAGAATGTTCACTGCCCACTGCTCCCAGTTCATTGGGAAATaGTATTCCACAGATGTAAAT | + |
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Preference number: 4 (lower is better) Translates to: NPSCFLYLSWRMFTAHCSQFIGK*YSTDVN Trigger: ATTTACATCTGTGGAATAGCATTTCCCAATGAACTG...GGAGCAGTGGGCAGTGAACATTCTCCAGCTGAGGTATAGGAAACAACTTGGGTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047194.4 |
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| CDS-3UTR CCA 90 bp | CCTATACTCAGGGATGACCTTGAACTTCTGACTCTTTATACTTCACAATGTTGGATGCTCTTCCAGGGTTaGGGAGTGCTTTTCTGTTTT | + |
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Preference number: 4 (lower is better) Translates to: PILRDDLELLTLYTSQCWMLFQG*GVLFCF Trigger: AAAACAGAAAAGCACTCCCCAACCCTGGAAGAGCAT...CCAACATTGTGAAGTATAAAGAGTCAGAAGTTCAAGGTCATCCCTGAGTATAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047194.4 |
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| 3UTR CAA 72 bp | TCTTGTAGTATTGTTTTGTTGGTGGTACAACCCAAGTaGTTTCCTATACCTCAGCTGGAGAATGTTCACTGC | + |
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Preference number: 4 (lower is better) Translates to: SCSIVLLVVQPK*FPIPQLENVHC Trigger: GCAGTGAACATTCTCCAGCTGAGGTATAGGAAACAACTTGGGTTGTACCACCAACAAAACAATACTACAAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047194.4 |
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| 3UTR CAA 72 bp | TATAGTCGTCCTCTGGTCTCTTGTAGTATTGTTTTGTaGGTGGTACAACCCAAGTTGTTTCCTATACCTCAG | + |
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Preference number: 4 (lower is better) Translates to: YSRPLVSCSIVL*VVQPKLFPIPQ Trigger: CTGAGGTATAGGAAACAACTTGGGTTGTACCACCAACAAAACAATACTACAAGAGACCAGAGGACGACTATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047194.4 |
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| CDS-3UTR TCA 90 bp | TCTTGTAGTATTGTTTTGTTGGTGGTACAACCCAAGTTGTTTCCTATACCTCAGGGGTTTCTTTCACTGTaGACTTGTCTGCCTCATTTC | + |
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Preference number: 4 (lower is better) Translates to: SCSIVLLVVQPKLFPIPQGFLSL*TCLPHF Trigger: GAAATGAGGCAGACAAGTTCACAGTGAAAGAAACCC...CTGAGGTATAGGAAACAACTTGGGTTGTACCACCAACAAAACAATACTACAAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047194.4 |
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| CDS-3UTR GCA 90 bp | CCTATACTCAGGGATGACCTTGAACTTCTGACTCTTTATACTTCACAATGTTGGTTCTGTTTTCATCAGTaGCCTCTTGCTCAGGTAGAT | + |
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Preference number: 4 (lower is better) Translates to: PILRDDLELLTLYTSQCWFCFHQ*PLAQVD Trigger: ATCTACCTGAGCAAGAGGGCACTGATGAAAACAGAA...CCAACATTGTGAAGTATAAAGAGTCAGAAGTTCAAGGTCATCCCTGAGTATAGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047194.4 |
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| 3UTR CAA 72 bp | TTCCTGTTTATAGTCGTCCTCTGGTCTCTTGTAGTATaGTTTTGTTGGTGGTACAACCCAAGTTGTTTCCTA | + |
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Preference number: 4 (lower is better) Translates to: FLFIVVLWSLVV*FCWWYNPSCFL Trigger: TAGGAAACAACTTGGGTTGTACCACCAACAAAACAATACTACAAGAGACCAGAGGACGACTATAAACAGGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047194.4 |
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| 3UTR CAA 72 bp | AGACCTGTGATCAAGTTAGTGAGCAGTGTGTCCTTGTaGGTACTTATATTCAAAGAACAATCCATGTCAAGC | + |
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Preference number: 4 (lower is better) Translates to: RPVIKLVSSVSL*VLIFKEQSMSS Trigger: GCTTGACATGGATTGTTCTTTGAATATAAGTACCAACAAGGACACACTGCTCACTAACTTGATCACAGGTCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047194.4 |
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| 3UTR CAA 72 bp | ACTAGACCTGTGATCAAGTTAGTGAGCAGTGTGTCCTaGTTGGTACTTATATTCAAAGAACAATCCATGTCA | + |
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Preference number: 4 (lower is better) Translates to: TRPVIKLVSSVS*LVLIFKEQSMS Trigger: TGACATGGATTGTTCTTTGAATATAAGTACCAACAAGGACACACTGCTCACTAACTTGATCACAGGTCTAGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047194.4 |
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| CDS-3UTR GCA 90 bp | CAGAAGAAATCACTTTTGTTCCAAGATACTGTTCACAATGAGTTTCTCTTACTCTCCACAGATGTAAATTaGACTGTCATTTGGAGACAG | + |
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Preference number: 4 (lower is better) Translates to: QKKSLLFQDTVHNEFLLLSTDVN*TVIWRQ Trigger: CTGTCTCCAAATGACAGTGCAATTTACATCTGTGGA...GAGTAAGAGAAACTCATTGTGAACAGTATCTTGGAACAAAAGTGATTTCTTCTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047194.4 |
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| CDS-3UTR TCA 90 bp | CAGAAGAAATCACTTTTGTTCCAAGATACTGTTCACAATGAGTTTCTCTTACTCTGGACCGTTAGATTTTaGTTTGAAGAGGACTATGAA | + |
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Preference number: 4 (lower is better) Translates to: QKKSLLFQDTVHNEFLLLWTVRF*FEEDYE Trigger: TTCATAGTCCTCTTCAAATCAAAATCTAACGGTCCA...GAGTAAGAGAAACTCATTGTGAACAGTATCTTGGAACAAAAGTGATTTCTTCTG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047194.4 |
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| CDS TCA 90 bp | TCTGCCTCATTTCTGCATCCATCCAAGCACAGAGCTTCAGGCTGGTaGGTACCACAGCGAAACCACAAGCTCTTTGGTGGCACTGGAGGG | + |
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Preference number: 5 (lower is better) Translates to: SASFLHPSKHRASGW*VPQRNHKLFGGTGG Trigger: CCCTCCAGTGCCACCAAAGAGCTTGTGGTTTCGCTGTGGTACTCACCAGCCTGAAGCTCTGTGCTTGGATGGATGCAGAAATGAGGCAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047194.4 |
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| CDS CCA 90 bp | AGGCTGGTGAGTACCACAGCGAAACCACAAGCTCTTTGGTGGCACTaGAGGGCATCCAACTGTAGAAAAGTTACACTCCATGGTGACGGC | + |
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Preference number: 5 (lower is better) Translates to: RLVSTTAKPQALWWH*RASNCRKVTLHGDG Trigger: GCCGTCACCATGGAGTGTAACTTTTCTACAGTTGGATGCCCTCCAGTGCCACCAAAGAGCTTGTGGTTTCGCTGTGGTACTCACCAGCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047194.4 |
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| CDS CCA 90 bp | AGCTTCAGGCTGGTGAGTACCACAGCGAAACCACAAGCTCTTTGGTaGCACTGGAGGGCATCCAACTGTAGAAAAGTTACACTCCATGGT | + |
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Preference number: 5 (lower is better) Translates to: SFRLVSTTAKPQALW*HWRASNCRKVTLHG Trigger: ACCATGGAGTGTAACTTTTCTACAGTTGGATGCCCTCCAGTGCCACCAAAGAGCTTGTGGTTTCGCTGTGGTACTCACCAGCCTGAAGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047194.4 |
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| CDS CCA 90 bp | CAGAGCTTCAGGCTGGTGAGTACCACAGCGAAACCACAAGCTCTTTaGTGGCACTGGAGGGCATCCAACTGTAGAAAAGTTACACTCCAT | + |
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Preference number: 5 (lower is better) Translates to: QSFRLVSTTAKPQAL*WHWRASNCRKVTLH Trigger: ATGGAGTGTAACTTTTCTACAGTTGGATGCCCTCCAGTGCCACCAAAGAGCTTGTGGTTTCGCTGTGGTACTCACCAGCCTGAAGCTCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047194.4 |
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| CDS CCA 90 bp | ATTGCACTGTCATTTGGAGACAGCCTGTTAACAGTGAGGAAGACTTaGTCCGGGTCCAGGGTTTCTTTCACTGTGAACTTGTCTGCCTCA | + |
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Preference number: 5 (lower is better) Translates to: IALSFGDSLLTVRKT*SGSRVSFTVNLSAS Trigger: TGAGGCAGACAAGTTCACAGTGAAAGAAACCCTGGACCCGGACCAAGTCTTCCTCACTGTTAACAGGCTGTCTCCAAATGACAGTGCAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047194.4 |
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| CDS-3UTR CAA 90 bp | GATCAGGCTGGCCTTGAACTCAGAAATTCACCTGCCTCTGCCTCCTTAGTGTTATATGCTCTTCCAGGGTaGGGGAGTGCTTTTCTGTTT | + |
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Preference number: 5 (lower is better) Translates to: DQAGLELRNSPASASLVLYALPG*GSAFLF Trigger: AAACAGAAAAGCACTCCCCAACCCTGGAAGAGCATA...TAACACTAAGGAGGCAGAGGCAGGTGAATTTCTGAGTTCAAGGCCAGCCTGATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047194.4 |
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| CDS-3UTR CAA 90 bp | TGCTGTATGTCCATTCACATTGCCGTAGATTCTGGAGTTGCACTGTCAGTGGCTGAGCACTCTTCTTTTTaGAGCCTTTGGTTTCTCTGC | + |
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Preference number: 5 (lower is better) Translates to: CCMSIHIAVDSGVALSVAEHSSF*SLWFLC Trigger: GCAGAGAAACCAAAGGCTCAAAAAAGAAGAGTGCTC...AGCCACTGACAGTGCAACTCCAGAATCTACGGCAATGTGAATGGACATACAGCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047194.4 |
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| CDS-3UTR CAA 90 bp | GATGACCTTGAACTTCTGACTCTTTATACTTCACAATGTTGGGAATACAGGCTTGAAACCACAAGCTCTTaGGTGGCACTGGAGGGCATC | + |
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Preference number: 5 (lower is better) Translates to: DDLELLTLYTSQCWEYRLETTSS*VALEGI Trigger: GATGCCCTCCAGTGCCACCAAAGAGCTTGTGGTTTC...AAGCCTGTATTCCCAACATTGTGAAGTATAAAGAGTCAGAAGTTCAAGGTCATC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047194.4 |
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| CDS-3UTR CAA 90 bp | TGCCAGCTGAGCTATACCCCAGCTCTCTTTGATGTTGTCTTGATTGCTGTATGTAAACTGCGCACCTCCTaGCTGAAAAGTCTTTCTCTT | + |
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Preference number: 5 (lower is better) Translates to: CQLSYTPALFDVVLIAVCKLRTS*LKSLSL Trigger: AAGAGAAAGACTTTTCAGCAAGGAGGTGCGCAGTTT...ACATACAGCAATCAAGACAACATCAAAGAGAGCTGGGGTATAGCTCAGCTGGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047194.4 |
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| CDS TCA 90 bp | TCTTACCACCAGTGTAGTCCCCTTTCCAACGTGTTTAGCGCTTGGTaGCAGTTCATTGGGAAATGCTATTCCACAGATGTAAATTGCACT | + |
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Preference number: 5 (lower is better) Translates to: SYHQCSPLSNVFSAW*QFIGKCYSTDVNCT Trigger: AGTGCAATTTACATCTGTGGAATAGCATTTCCCAATGAACTGTCACCAAGCGCTAAACACGTTGGAAAGGGGACTACACTGGTGGTAAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047194.4 |
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| CDS-3UTR CAA 90 bp | TGTTGGTGGTACAACCCAAGTTGTTTCCTATACCTCAGCTGGAGAATGTTCACTCCGTTAGATTTTGATTaGAAGAGGACTATGAAGGTC | + |
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Preference number: 5 (lower is better) Translates to: CWWYNPSCFLYLSWRMFTPLDFD*KRTMKV Trigger: GACCTTCATAGTCCTCTTCAAATCAAAATCTAACGG...AGTGAACATTCTCCAGCTGAGGTATAGGAAACAACTTGGGTTGTACCACCAACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047194.4 |
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| CDS-3UTR CAA 90 bp | CCTATACTCAGGGATGACCTTGAACTTCTGACTCTTTATACTTCACAATGTTGGTCTTTCACTGTGAACTaGTCTGCCTCATTTCTGCAT | + |
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Preference number: 5 (lower is better) Translates to: PILRDDLELLTLYTSQCWSFTVN*SASFLH Trigger: ATGCAGAAATGAGGCAGACAAGTTCACAGTGAAAGA...CCAACATTGTGAAGTATAAAGAGTCAGAAGTTCAAGGTCATCCCTGAGTATAGG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047194.4 |
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| CDS-3UTR CAA 90 bp | TCAGTTGTCTGCATTCCTGAGGCATTTCTGATAGGCTTTGGGTTTCCTGTTTATTTCCACAGATGTAAATaGCACTGTCATTTGGAGACA | + |
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Preference number: 5 (lower is better) Translates to: SVVCIPEAFLIGFGFPVYFHRCK*HCHLET Trigger: TGTCTCCAAATGACAGTGCAATTTACATCTGTGGAA...ATAAACAGGAAACCCAAAGCCTATCAGAAATGCCTCAGGAATGCAGACAACTGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047194.4 |
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| CDS TCA 72 bp | AGGCACCCACCATACCGACTTGGAAAAGGATCAGGCTaGTCTCTGGCCGGAGGCGGCTCCTGCGTGCACTCA | + |
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Preference number: 6 (lower is better) Translates to: RHPPYRLGKGSG*SLAGGGSCVHS Trigger: TGAGTGCACGCAGGAGCCGCCTCCGGCCAGAGATCAGCCTGATCCTTTTCCAAGTCGGTATGGTGGGTGCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047194.4 |
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| CDS TCA 72 bp | TTTCTGCATCCATCCAAGCACAGAGCTTCAGGCTGGTaGGTACCACAGCGAAACCACAAGCTCTTTGGTGGC | + |
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Preference number: 6 (lower is better) Translates to: FLHPSKHRASGW*VPQRNHKLFGG Trigger: GCCACCAAAGAGCTTGTGGTTTCGCTGTGGTACTCACCAGCCTGAAGCTCTGTGCTTGGATGGATGCAGAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047194.4 |
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| CDS CAA 90 bp | GTGAGGAAGACTTGGTCCGGGTCCAGGGTTTCTTTCACTGTGAACTaGTCTGCCTCATTTCTGCATCCATCCAAGCACAGAGCTTCAGGC | + |
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Preference number: 6 (lower is better) Translates to: VRKTWSGSRVSFTVN*SASFLHPSKHRASG Trigger: GCCTGAAGCTCTGTGCTTGGATGGATGCAGAAATGAGGCAGACAAGTTCACAGTGAAAGAAACCCTGGACCCGGACCAAGTCTTCCTCAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047194.4 |
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| CDS TCA 72 bp | GGAAGACTTGGTCCGGGTCCAGGGTTTCTTTCACTGTaGACTTGTCTGCCTCATTTCTGCATCCATCCAAGC | + |
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Preference number: 6 (lower is better) Translates to: GRLGPGPGFLSL*TCLPHFCIHPS Trigger: GCTTGGATGGATGCAGAAATGAGGCAGACAAGTTCACAGTGAAAGAAACCCTGGACCCGGACCAAGTCTTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047194.4 |
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| CDS GCA 72 bp | CCACTTCTAGGTAACCTGGTTGCAGCACATACACAGTaGAGGCACCCACCATACCGACTTGGAAAAGGATCA | + |
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Preference number: 6 (lower is better) Translates to: PLLGNLVAAHTQ*RHPPYRLGKGS Trigger: TGATCCTTTTCCAAGTCGGTATGGTGGGTGCCTGCACTGTGTATGTGCTGCAACCAGGTTACCTAGAAGTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047194.4 |
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| CDS CCA 72 bp | AGGCTGGTGAGTACCACAGCGAAACCACAAGCTCTTTaGTGGCACTGGAGGGCATCCAACTGTAGAAAAGTT | + |
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Preference number: 6 (lower is better) Translates to: RLVSTTAKPQAL*WHWRASNCRKV Trigger: AACTTTTCTACAGTTGGATGCCCTCCAGTGCCACCAAAGAGCTTGTGGTTTCGCTGTGGTACTCACCAGCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047194.4 |
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| CDS CCA 72 bp | CTGGTGAGTACCACAGCGAAACCACAAGCTCTTTGGTaGCACTGGAGGGCATCCAACTGTAGAAAAGTTACA | + |
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Preference number: 6 (lower is better) Translates to: LVSTTAKPQALW*HWRASNCRKVT Trigger: TGTAACTTTTCTACAGTTGGATGCCCTCCAGTGCCACCAAAGAGCTTGTGGTTTCGCTGTGGTACTCACCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047194.4 |
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| CDS CAA 72 bp | ACTTGGTCCGGGTCCAGGGTTTCTTTCACTGTGAACTaGTCTGCCTCATTTCTGCATCCATCCAAGCACAGA | + |
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Preference number: 6 (lower is better) Translates to: TWSGSRVSFTVN*SASFLHPSKHR Trigger: TCTGTGCTTGGATGGATGCAGAAATGAGGCAGACAAGTTCACAGTGAAAGAAACCCTGGACCCGGACCAAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047194.4 |
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| CDS CAA 90 bp | AATTGCACTGTCATTTGGAGACAGCCTGTTAACAGTGAGGAAGACTaGGTCCGGGTCCAGGGTTTCTTTCACTGTGAACTTGTCTGCCTC | + |
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Preference number: 6 (lower is better) Translates to: NCTVIWRQPVNSEED*VRVQGFFHCELVCL Trigger: GAGGCAGACAAGTTCACAGTGAAAGAAACCCTGGACCCGGACCAAGTCTTCCTCACTGTTAACAGGCTGTCTCCAAATGACAGTGCAATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047194.4 |
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| CDS CAA 90 bp | ACAGAGAGCAGAGCTAAGAGCACTATCAGGAAACTGCGCACCTCCTaGCTGAAAAGTCTTTCTCTTACCACCAGTGTAGTCCCCTTTCCA | + |
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Preference number: 6 (lower is better) Translates to: TESRAKSTIRKLRTS*LKSLSLTTSVVPFP Trigger: TGGAAAGGGGACTACACTGGTGGTAAGAGAAAGACTTTTCAGCAAGGAGGTGCGCAGTTTCCTGATAGTGCTCTTAGCTCTGCTCTCTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047194.4 |
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| CDS CCA 72 bp | TCATTTGGAGACAGCCTGTTAACAGTGAGGAAGACTTaGTCCGGGTCCAGGGTTTCTTTCACTGTGAACTTG | + |
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Preference number: 6 (lower is better) Translates to: SFGDSLLTVRKT*SGSRVSFTVNL Trigger: CAAGTTCACAGTGAAAGAAACCCTGGACCCGGACCAAGTCTTCCTCACTGTTAACAGGCTGTCTCCAAATGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047194.4 |
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| CDS CAA 72 bp | GTCATTTGGAGACAGCCTGTTAACAGTGAGGAAGACTaGGTCCGGGTCCAGGGTTTCTTTCACTGTGAACTT | + |
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Preference number: 6 (lower is better) Translates to: VIWRQPVNSEED*VRVQGFFHCEL Trigger: AAGTTCACAGTGAAAGAAACCCTGGACCCGGACCAAGTCTTCCTCACTGTTAACAGGCTGTCTCCAAATGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047194.4 |
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| CDS TCA 72 bp | CAGTGTAGTCCCCTTTCCAACGTGTTTAGCGCTTGGTaGCAGTTCATTGGGAAATGCTATTCCACAGATGTA | + |
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Preference number: 6 (lower is better) Translates to: QCSPLSNVFSAW*QFIGKCYSTDV Trigger: TACATCTGTGGAATAGCATTTCCCAATGAACTGTCACCAAGCGCTAAACACGTTGGAAAGGGGACTACACTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047194.4 |
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| CDS TCA 72 bp | GCCTTTGGTTTCTCTGCTTCTTGGACCGTTAGATTTTaGTTTGAAGAGGACTATGAAGGTCACACACACACC | + |
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Preference number: 6 (lower is better) Translates to: AFGFSASWTVRF*FEEDYEGHTHT Trigger: GGTGTGTGTGTGACCTTCATAGTCCTCTTCAAATCAAAATCTAACGGTCCAAGAAGCAGAGAAACCAAAGGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047194.4 |
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| CDS CAA 72 bp | TTGGTTTCTCTGCTTCTTGGACCGTTAGATTTTGATTaGAAGAGGACTATGAAGGTCACACACACACCGGTG | + |
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Preference number: 6 (lower is better) Translates to: LVSLLLGPLDFD*KRTMKVTHTPV Trigger: CACCGGTGTGTGTGTGACCTTCATAGTCCTCTTCAAATCAAAATCTAACGGTCCAAGAAGCAGAGAAACCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047194.4 |
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| CDS GCA 72 bp | CAGTTCATTGGGAAATGCTATTCCACAGATGTAAATTaGACTGTCATTTGGAGACAGCCTGTTAACAGTGAG | + |
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Preference number: 6 (lower is better) Translates to: QFIGKCYSTDVN*TVIWRQPVNSE Trigger: CTCACTGTTAACAGGCTGTCTCCAAATGACAGTGCAATTTACATCTGTGGAATAGCATTTCCCAATGAACTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047194.4 |
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