Pregenerated sensors for IGSF5 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000000159Ensembl transcript IDs: ENSMUST00000000163.13, ENSMUST00000081093.10, ENSMUST00000113794.8, ENSMUST00000136292.2
Found 139 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | ATAGTATATGTCTCTCTCCAGTTCTTTCATGATGCTGGCAGAATGTaGGCTTTGTCCCTCATCAGGCAGAATCCACGCCTAATTCACCTA | + |
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Preference number: 1 (lower is better) Translates to: IVYVSLQFFHDAGRM*ALSLIRQNPRLIHL Trigger: TAGGTGAATTAGGCGTGGATTCTGCCTGATGAGGGACAAAGCTCACATTCTGCCAGCATCATGAAAGAACTGGAGAGAGACATATACTAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000163.13 ENSMUST00000081093.10 |
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| 3UTR GCA 90 bp | CCATATTACCATGATCTCAGACAACAGAAGCATTTTGAAGGTCGTTaGAGAATCTATATCTGCCCTTCGTTGGATCGGCAGGAGTGTCAA | + |
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Preference number: 1 (lower is better) Translates to: PYYHDLRQQKHFEGR*RIYICPSLDRQECQ Trigger: TTGACACTCCTGCCGATCCAACGAAGGGCAGATATAGATTCTGCAACGACCTTCAAAATGCTTCTGTTGTCTGAGATCATGGTAATATGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000163.13 ENSMUST00000081093.10 |
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| 3UTR CCA 90 bp | AATGTGAATGTTCATGTGTTCTTCTTTGTCCCTTTTTATTCAGCCTaGACCAGCCTACAGGATGGCACTGCCAATATCTGGGGTTCTTTC | + |
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Preference number: 1 (lower is better) Translates to: NVNVHVFFFVPFYSA*TSLQDGTANIWGSF Trigger: GAAAGAACCCCAGATATTGGCAGTGCCATCCTGTAGGCTGGTCCAGGCTGAATAAAAAGGGACAAAGAAGAACACATGAACATTCACATT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000113794.8 |
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| 3UTR TCA 90 bp | TTCATTTGTTTATTAAATAGTATATGTCTCTCTCCAGTTCTTTCATaGTGCTGGCAGAATGTGAGCTTTGTCCCTCATCAGGCAGAATCC | + |
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Preference number: 1 (lower is better) Translates to: FICLLNSICLSPVLS*CWQNVSFVPHQAES Trigger: GGATTCTGCCTGATGAGGGACAAAGCTCACATTCTGCCAGCATCATGAAAGAACTGGAGAGAGACATATACTATTTAATAAACAAATGAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000163.13 ENSMUST00000081093.10 |
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| 3UTR-3UTR TCA 90 bp | GACGAGGATCAGGGCGCACATGGGGATGACTGTCTTGCGGAGAGCATTGGGACCCTCTTACTGCATCCCTaGGCTCCAGCTGCCAGTTAC | + |
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Preference number: 2 (lower is better) Translates to: DEDQGAHGDDCLAESIGTLLLHP*APAASY Trigger: GTAACTGGCAGCTGGAGCTCAGGGATGCAGTAAGAG...GGTCCCAATGCTCTCCGCAAGACAGTCATCCCCATGTGCGCCCTGATCCTCGTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000163.13 ENSMUST00000081093.10 |
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| 3UTR-3UTR TCA 90 bp | TACAACTGTGGTGACGAGGATCAGGGCGCACATGGGGATGACTGTCTTGCGGAGGGAAGAGAATGGCATTaGCTTGGTGGATGTGCACCA | + |
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Preference number: 2 (lower is better) Translates to: YNCGDEDQGAHGDDCLAEGREWH*LGGCAP Trigger: TGGTGCACATCCACCAAGTCAATGCCATTCTCTTCC...CTCCGCAAGACAGTCATCCCCATGTGCGCCCTGATCCTCGTCACCACAGTTGTA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000163.13 ENSMUST00000081093.10 |
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| 3UTR-3UTR TCA 90 bp | TTCACCTACAACTGTGGTGACGAGGATCAGGGCGCACATGGGGATGACTGTCTTCTCTTACTGCATCCCTaGGCTCCAGCTGCCAGTTAC | + |
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Preference number: 2 (lower is better) Translates to: FTYNCGDEDQGAHGDDCLLLLHP*APAASY Trigger: GTAACTGGCAGCTGGAGCTCAGGGATGCAGTAAGAG...AAGACAGTCATCCCCATGTGCGCCCTGATCCTCGTCACCACAGTTGTAGGTGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000163.13 ENSMUST00000081093.10 |
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| 3UTR-3UTR GCA 90 bp | GACGAGGATCAGGGCGCACATGGGGATGACTGTCTTGCGGAGAGCATTGGGACCTCAAGTCATGAGGAATaGCACCATGACAGACACTTG | + |
|
Preference number: 2 (lower is better) Translates to: DEDQGAHGDDCLAESIGTSSHEE*HHDRHL Trigger: CAAGTGTCTGTCATGGTGGCATTCCTCATGACTTGA...GGTCCCAATGCTCTCCGCAAGACAGTCATCCCCATGTGCGCCCTGATCCTCGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000163.13 ENSMUST00000081093.10 |
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| 3UTR-3UTR TCA 90 bp | GACGAGGATCAGGGCGCACATGGGGATGACTGTCTTGCGGAGAGCATTGGGACCTTTACTCGGCCACCTTaGGGAATTCACCAAAATCAT | + |
|
Preference number: 2 (lower is better) Translates to: DEDQGAHGDDCLAESIGTFTRPP*GIHQNH Trigger: ATGATTTTGGTGAATTCCTCAAGGTGGCCGAGTAAA...GGTCCCAATGCTCTCCGCAAGACAGTCATCCCCATGTGCGCCCTGATCCTCGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000000163.13 ENSMUST00000081093.10 |
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| 3UTR-3UTR TCA 90 bp | ACGAGGATCAGGGCGCACATGGGGATGACTGTCTTGCGGAGAGCATTGGGACCTTTTACTCGGCCACCTTaGGGAATTCACCAAAATCAT | + |
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Preference number: 2 (lower is better) Translates to: TRIRAHMGMTVLRRALGPFTRPP*GIHQNH Trigger: ATGATTTTGGTGAATTCCTCAAGGTGGCCGAGTAAA...AGGTCCCAATGCTCTCCGCAAGACAGTCATCCCCATGTGCGCCCTGATCCTCGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000000163.13 ENSMUST00000081093.10 |
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| 3UTR-3UTR GCA 90 bp | TTCACCTACAACTGTGGTGACGAGGATCAGGGCGCACATGGGGATGACTGTCTTTTGACTTGGTGGATGTaGACCAAGTACAGTCATGAG | + |
|
Preference number: 2 (lower is better) Translates to: FTYNCGDEDQGAHGDDCLLTWWM*TKYSHE Trigger: CTCATGACTGTACTTGGTGCACATCCACCAAGTCAA...AAGACAGTCATCCCCATGTGCGCCCTGATCCTCGTCACCACAGTTGTAGGTGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000000163.13 ENSMUST00000081093.10 |
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| 3UTR CAA 90 bp | CAGAAGCATTTTGAAGGTCGTTGCAGAATCTATATCTGCCCTTCGTaGGATCGGCAGGAGTGTCAAGTCATGAGGAATGCCACCATGACA | + |
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Preference number: 2 (lower is better) Translates to: QKHFEGRCRIYICPS*DRQECQVMRNATMT Trigger: TGTCATGGTGGCATTCCTCATGACTTGACACTCCTGCCGATCCAACGAAGGGCAGATATAGATTCTGCAACGACCTTCAAAATGCTTCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000163.13 ENSMUST00000081093.10 |
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| 3UTR-3UTR TCA 90 bp | TTCACCTACAACTGTGGTGACGAGGATCAGGGCGCACATGGGGATGACTGTCTTAAGACCATATTACCATaGTCTCAGACAACAGAAGCA | + |
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Preference number: 2 (lower is better) Translates to: FTYNCGDEDQGAHGDDCLKTILP*SQTTEA Trigger: TGCTTCTGTTGTCTGAGATCATGGTAATATGGTCTT...AAGACAGTCATCCCCATGTGCGCCCTGATCCTCGTCACCACAGTTGTAGGTGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000163.13 ENSMUST00000081093.10 |
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| 3UTR-3UTR GCA 90 bp | TACTGCATCCCTGAGCTCCAGCTGCCAGTTACTTACAAGATGCAGTTGAGTCTATTGACTTGGTGGATGTaGACCAAGTACAGTCATGAG | + |
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Preference number: 2 (lower is better) Translates to: YCIPELQLPVTYKMQLSLLTWWM*TKYSHE Trigger: CTCATGACTGTACTTGGTGCACATCCACCAAGTCAA...TAGACTCAACTGCATCTTGTAAGTAACTGGCAGCTGGAGCTCAGGGATGCAGTA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000163.13 ENSMUST00000081093.10 |
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| 3UTR CAA 90 bp | TTGGCAAAACTGAGACCCAGTCTCAGGATACGGAAGAGAATGGCATaGACTTGGTGGATGTGCACCAAGTACAGTCATGAGAAGTCTTTA | + |
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Preference number: 2 (lower is better) Translates to: LAKLRPSLRIRKRMA*TWWMCTKYSHEKSL Trigger: TAAAGACTTCTCATGACTGTACTTGGTGCACATCCACCAAGTCAATGCCATTCTCTTCCGTATCCTGAGACTGGGTCTCAGTTTTGCCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000163.13 ENSMUST00000081093.10 |
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| 3UTR-3UTR TCA 90 bp | GACCATATTACCATGATCTCAGACAACAGAAGCATTTTGAAGGTCGTTGCAGAAGGAAGAGAATGGCATTaGCTTGGTGGATGTGCACCA | + |
|
Preference number: 2 (lower is better) Translates to: DHITMISDNRSILKVVAEGREWH*LGGCAP Trigger: TGGTGCACATCCACCAAGTCAATGCCATTCTCTTCC...TTCTGCAACGACCTTCAAAATGCTTCTGTTGTCTGAGATCATGGTAATATGGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000163.13 ENSMUST00000081093.10 |
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| 3UTR-3UTR GCA 90 bp | GTTTCTGTAATAATGTTCAGTAACATCCCTAGCTGCGAAGTACACATAAAGACCTCAAGTCATGAGGAATaGCACCATGACAGACACTTG | + |
|
Preference number: 2 (lower is better) Translates to: VSVIMFSNIPSCEVHIKTSSHEE*HHDRHL Trigger: CAAGTGTCTGTCATGGTGGCATTCCTCATGACTTGA...GGTCTTTATGTGTACTTCGCAGCTAGGGATGTTACTGAACATTATTACAGAAAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000163.13 ENSMUST00000081093.10 |
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| 3UTR-3UTR TCA 90 bp | TGTAGTCAGGGAGCAACGATGAATGTGAATGTTCATGTGTTCTTCTTTGTCCCTTTAGTTACACCTCTTTaGAAATACCCTTCAGAGTGT | + |
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Preference number: 2 (lower is better) Translates to: CSQGATMNVNVHVFFFVPLVTPL*KYPSEC Trigger: ACACTCTGAAGGGTATTTTCAAAGAGGTGTAACTAA...AGGGACAAAGAAGAACACATGAACATTCACATTCATCGTTGCTCCCTGACTACA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113794.8 |
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| 3UTR-3UTR CAA 90 bp | GACGAGGATCAGGGCGCACATGGGGATGACTGTCTTGCGGAGAGCATTGGGACCGAGAATGGCATTGACTaGGTGGATGTGCACCAAGTA | + |
|
Preference number: 3 (lower is better) Translates to: DEDQGAHGDDCLAESIGTENGID*VDVHQV Trigger: TACTTGGTGCACATCCACCAAGTCAATGCCATTCTC...GGTCCCAATGCTCTCCGCAAGACAGTCATCCCCATGTGCGCCCTGATCCTCGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000163.13 ENSMUST00000081093.10 |
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| 3UTR-3UTR CAA 90 bp | ACTGCCTCTCCTCTTACTGCATCCCTGAGCTCCAGCTGCCAGTTACTTACAAGACGGAAGAGAATGGCATaGACTTGGTGGATGTGCACC | + |
|
Preference number: 3 (lower is better) Translates to: TASPLTASLSSSCQLLTRRKRMA*TWWMCT Trigger: GGTGCACATCCACCAAGTCAATGCCATTCTCTTCCG...TCTTGTAAGTAACTGGCAGCTGGAGCTCAGGGATGCAGTAAGAGGAGAGGCAGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000163.13 ENSMUST00000081093.10 |
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| 3UTR TCA 72 bp | CTGATTCCTCCTGTCACTATTAACCATCAGCTCCGGTaGCTCCGATGCAGACTCCTTGGCAAAACTGAGACC | + |
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Preference number: 3 (lower is better) Translates to: LIPPVTINHQLR*LRCRLLGKTET Trigger: GGTCTCAGTTTTGCCAAGGAGTCTGCATCGGAGTCACCGGAGCTGATGGTTAATAGTGACAGGAGGAATCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000163.13 ENSMUST00000081093.10 |
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| 3UTR GCA 72 bp | TTCGTTGGATCGGCAGGAGTGTCAAGTCATGAGGAATaGCACCATGACAGACACTTGGGTTTTACTCGGCCA | + |
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Preference number: 3 (lower is better) Translates to: FVGSAGVSSHEE*HHDRHLGFTRP Trigger: TGGCCGAGTAAAACCCAAGTGTCTGTCATGGTGGCATTCCTCATGACTTGACACTCCTGCCGATCCAACGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000163.13 ENSMUST00000081093.10 |
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| 3UTR-3UTR CAA 90 bp | TACTGCATCCCTGAGCTCCAGCTGCCAGTTACTTACAAGATGCAGTTGAGTCTATCCGATGCAGACTCCTaGGCAAAACTGAGACCCAGT | + |
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Preference number: 3 (lower is better) Translates to: YCIPELQLPVTYKMQLSLSDADS*AKLRPS Trigger: ACTGGGTCTCAGTTTTGCCAAGGAGTCTGCATCGGA...TAGACTCAACTGCATCTTGTAAGTAACTGGCAGCTGGAGCTCAGGGATGCAGTA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000163.13 ENSMUST00000081093.10 |
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| 3UTR TCA 72 bp | GTCTCTCTCCAGTTCTTTCATGATGCTGGCAGAATGTaGGCTTTGTCCCTCATCAGGCAGAATCCACGCCTA | + |
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Preference number: 3 (lower is better) Translates to: VSLQFFHDAGRM*ALSLIRQNPRL Trigger: TAGGCGTGGATTCTGCCTGATGAGGGACAAAGCTCACATTCTGCCAGCATCATGAAAGAACTGGAGAGAGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000163.13 ENSMUST00000081093.10 |
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| 3UTR CCA 72 bp | CCCAGTCTCAGGATACGGAAGAGAATGGCATTGACTTaGTGGATGTGCACCAAGTACAGTCATGAGAAGTCT | + |
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Preference number: 3 (lower is better) Translates to: PSLRIRKRMALT*WMCTKYSHEKS Trigger: AGACTTCTCATGACTGTACTTGGTGCACATCCACCAAGTCAATGCCATTCTCTTCCGTATCCTGAGACTGGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000163.13 ENSMUST00000081093.10 |
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| 3UTR GCA 72 bp | CATGATCTCAGACAACAGAAGCATTTTGAAGGTCGTTaGAGAATCTATATCTGCCCTTCGTTGGATCGGCAG | + |
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Preference number: 3 (lower is better) Translates to: HDLRQQKHFEGR*RIYICPSLDRQ Trigger: CTGCCGATCCAACGAAGGGCAGATATAGATTCTGCAACGACCTTCAAAATGCTTCTGTTGTCTGAGATCATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000163.13 ENSMUST00000081093.10 |
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| 3UTR-3UTR CAA 90 bp | GTTTCTGTAATAATGTTCAGTAACATCCCTAGCTGCGAAGTACACATAAAGACCCGGAAGAGAATGGCATaGACTTGGTGGATGTGCACC | + |
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Preference number: 3 (lower is better) Translates to: VSVIMFSNIPSCEVHIKTRKRMA*TWWMCT Trigger: GGTGCACATCCACCAAGTCAATGCCATTCTCTTCCG...GGTCTTTATGTGTACTTCGCAGCTAGGGATGTTACTGAACATTATTACAGAAAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000163.13 ENSMUST00000081093.10 |
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| 3UTR-3UTR CAA 90 bp | GTTTCTGTAATAATGTTCAGTAACATCCCTAGCTGCGAAGTACACATAAAGACCCACCATGACAGACACTaGGGTTTTACTCGGCCACCT | + |
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Preference number: 3 (lower is better) Translates to: VSVIMFSNIPSCEVHIKTHHDRH*GFTRPP Trigger: AGGTGGCCGAGTAAAACCCAAGTGTCTGTCATGGTG...GGTCTTTATGTGTACTTCGCAGCTAGGGATGTTACTGAACATTATTACAGAAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000163.13 ENSMUST00000081093.10 |
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| 3UTR TCA 72 bp | ATATCTGGGGTTCTTTCTACCTTAGTTACACCTCTTTaGAAATACCCTTCAGAGTGTCTCCCGGGTGATTCC | + |
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Preference number: 3 (lower is better) Translates to: ISGVLSTLVTPL*KYPSECLPGDS Trigger: GGAATCACCCGGGAGACACTCTGAAGGGTATTTTCAAAGAGGTGTAACTAAGGTAGAAAGAACCCCAGATAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113794.8 ENSMUST00000136292.2 |
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| 3UTR CCA 72 bp | AGTCTCAGGATACGGAAGAGAATGGCATTGACTTGGTaGATGTGCACCAAGTACAGTCATGAGAAGTCTTTA | + |
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Preference number: 3 (lower is better) Translates to: SLRIRKRMALTW*MCTKYSHEKSL Trigger: TAAAGACTTCTCATGACTGTACTTGGTGCACATCCACCAAGTCAATGCCATTCTCTTCCGTATCCTGAGACT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000163.13 ENSMUST00000081093.10 |
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| 3UTR TCA 72 bp | TTATTAAATAGTATATGTCTCTCTCCAGTTCTTTCATaGTGCTGGCAGAATGTGAGCTTTGTCCCTCATCAG | + |
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Preference number: 3 (lower is better) Translates to: LLNSICLSPVLS*CWQNVSFVPHQ Trigger: CTGATGAGGGACAAAGCTCACATTCTGCCAGCATCATGAAAGAACTGGAGAGAGACATATACTATTTAATAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000163.13 ENSMUST00000081093.10 |
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| CDS-3UTR TCA 90 bp | GACGAGGATCAGGGCGCACATGGGGATGACTGTCTTGCGGAGAGCATTGGGACCGGAAATATCCGGGAGTaGGGTCCAGCCCACGGCATA | + |
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Preference number: 4 (lower is better) Translates to: DEDQGAHGDDCLAESIGTGNIRE*GPAHGI Trigger: TATGCCGTGGGCTGGACCTCACTCCCGGATATTTCC...GGTCCCAATGCTCTCCGCAAGACAGTCATCCCCATGTGCGCCCTGATCCTCGTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000163.13 |
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| CDS-3UTR GCA 90 bp | GACGAGGATCAGGGCGCACATGGGGATGACTGTCTTGCGGAGAGCATTGGGACCGGCTGTTCTGCAGGCTaGATTGCACGGATCCCGAGT | + |
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Preference number: 4 (lower is better) Translates to: DEDQGAHGDDCLAESIGTGCSAG*IARIPS Trigger: ACTCGGGATCCGTGCAATGCAGCCTGCAGAACAGCC...GGTCCCAATGCTCTCCGCAAGACAGTCATCCCCATGTGCGCCCTGATCCTCGTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000163.13 ENSMUST00000081093.10 |
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| CDS-3UTR TCA 90 bp | GACGAGGATCAGGGCGCACATGGGGATGACTGTCTTGCGGAGAGCATTGGGACCAGAAGCTTCCAGCCGTaGGTCACGGTGCAGTTGAAG | + |
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Preference number: 4 (lower is better) Translates to: DEDQGAHGDDCLAESIGTRSFQP*VTVQLK Trigger: CTTCAACTGCACCGTGACTCACGGCTGGAAGCTTCT...GGTCCCAATGCTCTCCGCAAGACAGTCATCCCCATGTGCGCCCTGATCCTCGTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000163.13 ENSMUST00000081093.10 |
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| CDS-3UTR TCA 90 bp | GACGAGGATCAGGGCGCACATGGGGATGACTGTCTTGCGGAGAGCATTGGGACCTGGGTCCTTGGGTGGTaGGACTCAGCACCACCATTT | + |
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Preference number: 4 (lower is better) Translates to: DEDQGAHGDDCLAESIGTWVLGW*DSAPPF Trigger: AAATGGTGGTGCTGAGTCTCACCACCCAAGGACCCA...GGTCCCAATGCTCTCCGCAAGACAGTCATCCCCATGTGCGCCCTGATCCTCGTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000163.13 ENSMUST00000081093.10 |
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| CDS-3UTR TCA 90 bp | TTCACCTACAACTGTGGTGACGAGGATCAGGGCGCACATGGGGATGACTGTCTTCCACTGCCAGCAGGATaGTGGCCCAGGTCGGCAGTG | + |
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Preference number: 4 (lower is better) Translates to: FTYNCGDEDQGAHGDDCLPLPAG*WPRSAV Trigger: CACTGCCGACCTGGGCCATCATCCTGCTGGCAGTGG...AAGACAGTCATCCCCATGTGCGCCCTGATCCTCGTCACCACAGTTGTAGGTGAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000163.13 ENSMUST00000081093.10 |
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| CDS-3UTR CCA 90 bp | TACAACTGTGGTGACGAGGATCAGGGCGCACATGGGGATGACTGTCTTGCGGAGGGTCCCGTTGCCCAGTaGTGTGAGGTCCAGGACACT | + |
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Preference number: 4 (lower is better) Translates to: YNCGDEDQGAHGDDCLAEGPVAQ*CEVQDT Trigger: AGTGTCCTGGACCTCACACCACTGGGCAACGGGACC...CTCCGCAAGACAGTCATCCCCATGTGCGCCCTGATCCTCGTCACCACAGTTGTA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000163.13 |
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| CDS-3UTR TCA 90 bp | ACTGCCTCTCCTCTTACTGCATCCCTGAGCTCCAGCTGCCAGTTACTTACAAGACCACTGCCAGCAGGATaGTGGCCCAGGTCGGCAGTG | + |
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Preference number: 4 (lower is better) Translates to: TASPLTASLSSSCQLLTRPLPAG*WPRSAV Trigger: CACTGCCGACCTGGGCCATCATCCTGCTGGCAGTGG...TCTTGTAAGTAACTGGCAGCTGGAGCTCAGGGATGCAGTAAGAGGAGAGGCAGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000163.13 ENSMUST00000081093.10 |
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| CDS-3UTR GCA 90 bp | TACAACTGTGGTGACGAGGATCAGGGCGCACATGGGGATGACTGTCTTGCGGAGGGCTGTTCTGCAGGCTaGATTGCACGGATCCCGAGT | + |
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Preference number: 4 (lower is better) Translates to: YNCGDEDQGAHGDDCLAEGCSAG*IARIPS Trigger: ACTCGGGATCCGTGCAATGCAGCCTGCAGAACAGCC...CTCCGCAAGACAGTCATCCCCATGTGCGCCCTGATCCTCGTCACCACAGTTGTA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000163.13 ENSMUST00000081093.10 |
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| CDS-3UTR GCA 90 bp | GACGAGGATCAGGGCGCACATGGGGATGACTGTCTTGCGGAGAGCATTGGGACCAGGGTCCCCATGACTTaGACTGAGAGGAAGGCAGAT | + |
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Preference number: 4 (lower is better) Translates to: DEDQGAHGDDCLAESIGTRVPMT*TERKAD Trigger: ATCTGCCTTCCTCTCAGTGCAAGTCATGGGGACCCT...GGTCCCAATGCTCTCCGCAAGACAGTCATCCCCATGTGCGCCCTGATCCTCGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000163.13 |
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| CDS-3UTR CCA 90 bp | TACAACTGTGGTGACGAGGATCAGGGCGCACATGGGGATGACTGTCTTGCGGAGGTGATGATGGGTCCTTaGGTGGTGAGACTCAGCACC | + |
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Preference number: 4 (lower is better) Translates to: YNCGDEDQGAHGDDCLAEVMMGP*VVRLST Trigger: GGTGCTGAGTCTCACCACCCAAGGACCCATCATCAC...CTCCGCAAGACAGTCATCCCCATGTGCGCCCTGATCCTCGTCACCACAGTTGTA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000163.13 ENSMUST00000081093.10 |
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| CDS-3UTR TCA 90 bp | ACGAGGATCAGGGCGCACATGGGGATGACTGTCTTGCGGAGAGCATTGGGACCTGAACCACAGTCAGGTTaGCAGTTAAGGACTTGCTGG | + |
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Preference number: 4 (lower is better) Translates to: TRIRAHMGMTVLRRALGPEPQSG*QLRTCW Trigger: CCAGCAAGTCCTTAACTGTCAACCTGACTGTGGTTC...AGGTCCCAATGCTCTCCGCAAGACAGTCATCCCCATGTGCGCCCTGATCCTCGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000163.13 |
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| CDS-3UTR TCA 90 bp | CATGTGTTCTTCTTTGTCCCTTTTTATTCAGCCTGGACCAGCCTACAGGATGGCCCACTGCCAGCAGGATaGTGGCCCAGGTCGGCAGTG | + |
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Preference number: 4 (lower is better) Translates to: HVFFFVPFYSAWTSLQDGPLPAG*WPRSAV Trigger: CACTGCCGACCTGGGCCATCATCCTGCTGGCAGTGG...GCCATCCTGTAGGCTGGTCCAGGCTGAATAAAAAGGGACAAAGAAGAACACATG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000113794.8 |
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| CDS-3UTR GCA 90 bp | TACAACTGTGGTGACGAGGATCAGGGCGCACATGGGGATGACTGTCTTGCGGAGCCCGAGTCACTGGGCTaGACATCATGGATGATCAAC | + |
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Preference number: 4 (lower is better) Translates to: YNCGDEDQGAHGDDCLAEPESLG*TSWMIN Trigger: GTTGATCATCCATGATGTGCAGCCCAGTGACTCGGG...CTCCGCAAGACAGTCATCCCCATGTGCGCCCTGATCCTCGTCACCACAGTTGTA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000163.13 ENSMUST00000081093.10 |
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| CDS-3UTR GCA 90 bp | TACAACTGTGGTGACGAGGATCAGGGCGCACATGGGGATGACTGTCTTGCGGAGAGTCTGTGCAGCCTTTaGCTCATCCGAACTGTACCC | + |
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Preference number: 4 (lower is better) Translates to: YNCGDEDQGAHGDDCLAESLCSL*LIRTVP Trigger: GGGTACAGTTCGGATGAGGCAAAGGCTGCACAGACT...CTCCGCAAGACAGTCATCCCCATGTGCGCCCTGATCCTCGTCACCACAGTTGTA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000163.13 ENSMUST00000081093.10 |
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| CDS-3UTR GCA 90 bp | TACAACTGTGGTGACGAGGATCAGGGCGCACATGGGGATGACTGTCTTGCGGAGGAGAGATGCAGTCTGTaGAGCCTTTGCCTCATCCGA | + |
|
Preference number: 4 (lower is better) Translates to: YNCGDEDQGAHGDDCLAEERCSL*SLCLIR Trigger: TCGGATGAGGCAAAGGCTGCACAGACTGCATCTCTC...CTCCGCAAGACAGTCATCCCCATGTGCGCCCTGATCCTCGTCACCACAGTTGTA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000163.13 ENSMUST00000081093.10 |
||
| CDS-3UTR GCA 90 bp | GACGAGGATCAGGGCGCACATGGGGATGACTGTCTTGCGGAGAGCATTGGGACCGATAAGGAAGGCTACTaGTGCGTTTTTCTGGAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: DEDQGAHGDDCLAESIGTDKEGY*CVFLEG Trigger: GCCTTCCAGAAAAACGCAGCAGTAGCCTTCCTTATC...GGTCCCAATGCTCTCCGCAAGACAGTCATCCCCATGTGCGCCCTGATCCTCGTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000000163.13 ENSMUST00000081093.10 |
||
| CDS-3UTR CCA 90 bp | TACAACTGTGGTGACGAGGATCAGGGCGCACATGGGGATGACTGTCTTGCGGAGGCAGATCCAAACCCATaGCTGTTCTGCAGGCTGCAT | + |
|
Preference number: 4 (lower is better) Translates to: YNCGDEDQGAHGDDCLAEADPNP*LFCRLH Trigger: ATGCAGCCTGCAGAACAGCCATGGGTTTGGATCTGC...CTCCGCAAGACAGTCATCCCCATGTGCGCCCTGATCCTCGTCACCACAGTTGTA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000163.13 ENSMUST00000081093.10 |
||
| CDS-3UTR CCA 90 bp | ACGAGGATCAGGGCGCACATGGGGATGACTGTCTTGCGGAGAGCATTGGGACCTTCCAATACTGTCAGGTaGAGGCTGAACCACAGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: TRIRAHMGMTVLRRALGPSNTVR*RLNHSQ Trigger: CTGACTGTGGTTCAGCCTCCACCTGACAGTATTGGA...AGGTCCCAATGCTCTCCGCAAGACAGTCATCCCCATGTGCGCCCTGATCCTCGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000163.13 |
||
| CDS-3UTR CCA 90 bp | GACGAGGATCAGGGCGCACATGGGGATGACTGTCTTGCGGAGAGCATTGGGACCCTTCCTTTTCTCTCCTaGAGGCACAACAGCAACAGA | + |
|
Preference number: 4 (lower is better) Translates to: DEDQGAHGDDCLAESIGTLPFLS*RHNSNR Trigger: TCTGTTGCTGTTGTGCCTCCAGGAGAGAAAAGGAAG...GGTCCCAATGCTCTCCGCAAGACAGTCATCCCCATGTGCGCCCTGATCCTCGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000000163.13 ENSMUST00000081093.10 |
||
| CDS-3UTR TCA 90 bp | ACTGCCTCTCCTCTTACTGCATCCCTGAGCTCCAGCTGCCAGTTACTTACAAGATCAGCTGAGCCAGGATaGCCAGCACAGCCAGGACAT | + |
|
Preference number: 4 (lower is better) Translates to: TASPLTASLSSSCQLLTRSAEPG*PAQPGH Trigger: ATGTCCTGGCTGTGCTGGTCATCCTGGCTCAGCTGA...TCTTGTAAGTAACTGGCAGCTGGAGCTCAGGGATGCAGTAAGAGGAGAGGCAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000163.13 ENSMUST00000081093.10 |
||
| CDS-3UTR TCA 90 bp | TACAACTGTGGTGACGAGGATCAGGGCGCACATGGGGATGACTGTCTTGCGGAGACATTTCTGACCTTCTaGGGACTGGCGATGTCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: YNCGDEDQGAHGDDCLAETFLTF*GLAMSK Trigger: CTTTGACATCGCCAGTCCTCAGAAGGTCAGAAATGT...CTCCGCAAGACAGTCATCCCCATGTGCGCCCTGATCCTCGTCACCACAGTTGTA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000163.13 ENSMUST00000081093.10 |
||
| CDS-3UTR GCA 90 bp | ACTGCCTCTCCTCTTACTGCATCCCTGAGCTCCAGCTGCCAGTTACTTACAAGACAAGGAAAAGGCCACTaGCAGCAGGATGATGGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: TASPLTASLSSSCQLLTRQGKGH*QQDDGP Trigger: TGGGCCATCATCCTGCTGGCAGTGGCCTTTTCCTTG...TCTTGTAAGTAACTGGCAGCTGGAGCTCAGGGATGCAGTAAGAGGAGAGGCAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000163.13 ENSMUST00000081093.10 |
||
| CDS-3UTR GCA 90 bp | TTCACCTACAACTGTGGTGACGAGGATCAGGGCGCACATGGGGATGACTGTCTTGAGAGATGCAGTCTGTaGAGCCTTTGCCTCATCCGA | + |
|
Preference number: 4 (lower is better) Translates to: FTYNCGDEDQGAHGDDCLERCSL*SLCLIR Trigger: TCGGATGAGGCAAAGGCTGCACAGACTGCATCTCTC...AAGACAGTCATCCCCATGTGCGCCCTGATCCTCGTCACCACAGTTGTAGGTGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000163.13 ENSMUST00000081093.10 |
||
| CDS-3UTR CCA 90 bp | ATGGACTCTCAGGATTCAAGTCACCACAGCAGAAAGGTCACGATAACCAGAGCAGGTCCCGTTGCCCAGTaGTGTGAGGTCCAGGACACT | + |
|
Preference number: 4 (lower is better) Translates to: MDSQDSSHHSRKVTITRAGPVAQ*CEVQDT Trigger: AGTGTCCTGGACCTCACACCACTGGGCAACGGGACC...TGCTCTGGTTATCGTGACCTTTCTGCTGTGGTGACTTGAATCCTGAGAGTCCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113794.8 |
||
| CDS-3UTR CCA 90 bp | TACAACTGTGGTGACGAGGATCAGGGCGCACATGGGGATGACTGTCTTGCGGAGCTTCCTTTTCTCTCCTaGAGGCACAACAGCAACAGA | + |
|
Preference number: 4 (lower is better) Translates to: YNCGDEDQGAHGDDCLAELPFLS*RHNSNR Trigger: TCTGTTGCTGTTGTGCCTCCAGGAGAGAAAAGGAAG...CTCCGCAAGACAGTCATCCCCATGTGCGCCCTGATCCTCGTCACCACAGTTGTA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000000163.13 ENSMUST00000081093.10 |
||
| 3UTR CAA 72 bp | TTAACCATCAGCTCCGGTGACTCCGATGCAGACTCCTaGGCAAAACTGAGACCCAGTCTCAGGATACGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: LTISSGDSDADS*AKLRPSLRIRK Trigger: CTTCCGTATCCTGAGACTGGGTCTCAGTTTTGCCAAGGAGTCTGCATCGGAGTCACCGGAGCTGATGGTTAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000163.13 ENSMUST00000081093.10 |
||
| CDS-3UTR TCA 90 bp | CATGTGTTCTTCTTTGTCCCTTTTTATTCAGCCTGGACCAGCCTACAGGATGGCCGTTGCCCAGTGGTGTaGGGTCCAGGACACTCAAGA | + |
|
Preference number: 4 (lower is better) Translates to: HVFFFVPFYSAWTSLQDGRCPVV*GPGHSR Trigger: TCTTGAGTGTCCTGGACCTCACACCACTGGGCAACG...GCCATCCTGTAGGCTGGTCCAGGCTGAATAAAAAGGGACAAAGAAGAACACATG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000113794.8 |
||
| CDS-3UTR GCA 90 bp | TATGGACTCTCAGGATTCAAGTCACCACAGCAGAAAGGTCACGATAACCAGAGCGGCTGTTCTGCAGGCTaGATTGCACGGATCCCGAGT | + |
|
Preference number: 4 (lower is better) Translates to: YGLSGFKSPQQKGHDNQSGCSAG*IARIPS Trigger: ACTCGGGATCCGTGCAATGCAGCCTGCAGAACAGCC...GCTCTGGTTATCGTGACCTTTCTGCTGTGGTGACTTGAATCCTGAGAGTCCATA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113794.8 |
||
| CDS-3UTR GCA 90 bp | ACTGCCTCTCCTCTTACTGCATCCCTGAGCTCCAGCTGCCAGTTACTTACAAGAAGTCTGTGCAGCCTTTaGCTCATCCGAACTGTACCC | + |
|
Preference number: 4 (lower is better) Translates to: TASPLTASLSSSCQLLTRSLCSL*LIRTVP Trigger: GGGTACAGTTCGGATGAGGCAAAGGCTGCACAGACT...TCTTGTAAGTAACTGGCAGCTGGAGCTCAGGGATGCAGTAAGAGGAGAGGCAGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000163.13 ENSMUST00000081093.10 |
||
| CDS-3UTR CCA 90 bp | TTCACCTACAACTGTGGTGACGAGGATCAGGGCGCACATGGGGATGACTGTCTTCTGGGCTGCACATCATaGATGATCAACTCCGAGATG | + |
|
Preference number: 4 (lower is better) Translates to: FTYNCGDEDQGAHGDDCLLGCTS*MINSEM Trigger: CATCTCGGAGTTGATCATCCATGATGTGCAGCCCAG...AAGACAGTCATCCCCATGTGCGCCCTGATCCTCGTCACCACAGTTGTAGGTGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000163.13 ENSMUST00000081093.10 |
||
| CDS-3UTR TCA 90 bp | ATGGACTCTCAGGATTCAAGTCACCACAGCAGAAAGGTCACGATAACCAGAGCATGGGTCCTTGGGTGGTaGGACTCAGCACCACCATTT | + |
|
Preference number: 4 (lower is better) Translates to: MDSQDSSHHSRKVTITRAWVLGW*DSAPPF Trigger: AAATGGTGGTGCTGAGTCTCACCACCCAAGGACCCA...TGCTCTGGTTATCGTGACCTTTCTGCTGTGGTGACTTGAATCCTGAGAGTCCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113794.8 |
||
| CDS-3UTR GCA 90 bp | GGACTCTCAGGATTCAAGTCACCACAGCAGAAAGGTCACGATAACCAGAGCATGGAGAGATGCAGTCTGTaGAGCCTTTGCCTCATCCGA | + |
|
Preference number: 4 (lower is better) Translates to: GLSGFKSPQQKGHDNQSMERCSL*SLCLIR Trigger: TCGGATGAGGCAAAGGCTGCACAGACTGCATCTCTC...CATGCTCTGGTTATCGTGACCTTTCTGCTGTGGTGACTTGAATCCTGAGAGTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113794.8 |
||
| CDS-3UTR GCA 90 bp | ACTGCCTCTCCTCTTACTGCATCCCTGAGCTCCAGCTGCCAGTTACTTACAAGATTTAGGAGGGAGAGATaGAGTCTGTGCAGCCTTTGC | + |
|
Preference number: 4 (lower is better) Translates to: TASPLTASLSSSCQLLTRFRRER*SLCSLC Trigger: GCAAAGGCTGCACAGACTGCATCTCTCCCTCCTAAA...TCTTGTAAGTAACTGGCAGCTGGAGCTCAGGGATGCAGTAAGAGGAGAGGCAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000163.13 ENSMUST00000081093.10 |
||
| CDS-3UTR GCA 90 bp | TTCACCTACAACTGTGGTGACGAGGATCAGGGCGCACATGGGGATGACTGTCTTGATAAGGAAGGCTACTaGTGCGTTTTTCTGGAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: FTYNCGDEDQGAHGDDCLDKEGY*CVFLEG Trigger: GCCTTCCAGAAAAACGCAGCAGTAGCCTTCCTTATC...AAGACAGTCATCCCCATGTGCGCCCTGATCCTCGTCACCACAGTTGTAGGTGAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000000163.13 ENSMUST00000081093.10 |
||
| CDS-3UTR CCA 90 bp | TTCACCTACAACTGTGGTGACGAGGATCAGGGCGCACATGGGGATGACTGTCTTACTGCTGCGTTTTTCTaGAAGGCTGACTTCAGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: FTYNCGDEDQGAHGDDCLTAAFF*KADFSR Trigger: TCTGCTGAAGTCAGCCTTCCAGAAAAACGCAGCAGT...AAGACAGTCATCCCCATGTGCGCCCTGATCCTCGTCACCACAGTTGTAGGTGAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000000163.13 ENSMUST00000081093.10 |
||
| CDS-3UTR TCA 90 bp | TCTTTCTACCTTAGTTACACCTCTTTGAAAATACCCTTCAGAGTGTCTCCCGGGTCAGCTGAGCCAGGATaGCCAGCACAGCCAGGACAT | + |
|
Preference number: 4 (lower is better) Translates to: SFYLSYTSLKIPFRVSPGSAEPG*PAQPGH Trigger: ATGTCCTGGCTGTGCTGGTCATCCTGGCTCAGCTGA...CCCGGGAGACACTCTGAAGGGTATTTTCAAAGAGGTGTAACTAAGGTAGAAAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113794.8 |
||
| CDS-3UTR TCA 90 bp | TTCTTCTTTGTCCCTTTTTATTCAGCCTGGACCAGCCTACAGGATGGCACTGCCGAACCACAGTCAGGTTaGCAGTTAAGGACTTGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: FFFVPFYSAWTSLQDGTAEPQSG*QLRTCW Trigger: CCAGCAAGTCCTTAACTGTCAACCTGACTGTGGTTC...GGCAGTGCCATCCTGTAGGCTGGTCCAGGCTGAATAAAAAGGGACAAAGAAGAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000113794.8 |
||
| CDS-3UTR CCA 90 bp | GTTCTTCTTTGTCCCTTTTTATTCAGCCTGGACCAGCCTACAGGATGGCACTGCTCCAATACTGTCAGGTaGAGGCTGAACCACAGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: VLLCPFLFSLDQPTGWHCSNTVR*RLNHSQ Trigger: CTGACTGTGGTTCAGCCTCCACCTGACAGTATTGGA...GCAGTGCCATCCTGTAGGCTGGTCCAGGCTGAATAAAAAGGGACAAAGAAGAAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000113794.8 |
||
| 3UTR CAA 72 bp | CTGAGACCCAGTCTCAGGATACGGAAGAGAATGGCATaGACTTGGTGGATGTGCACCAAGTACAGTCATGAG | + |
|
Preference number: 4 (lower is better) Translates to: LRPSLRIRKRMA*TWWMCTKYSHE Trigger: CTCATGACTGTACTTGGTGCACATCCACCAAGTCAATGCCATTCTCTTCCGTATCCTGAGACTGGGTCTCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000163.13 ENSMUST00000081093.10 |
||
| CDS-3UTR GCA 90 bp | ACCCTTTTATATGGACTCTCAGGATTCAAGTCACCACAGCAGAAAGGTCACGATCAAGGAAAAGGCCACTaGCAGCAGGATGATGGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: TLLYGLSGFKSPQQKGHDQGKGH*QQDDGP Trigger: TGGGCCATCATCCTGCTGGCAGTGGCCTTTTCCTTG...ATCGTGACCTTTCTGCTGTGGTGACTTGAATCCTGAGAGTCCATATAAAAGGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113794.8 |
||
| CDS-3UTR GCA 90 bp | GGACTCTCAGGATTCAAGTCACCACAGCAGAAAGGTCACGATAACCAGAGCATGGATAAGGAAGGCTACTaGTGCGTTTTTCTGGAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: GLSGFKSPQQKGHDNQSMDKEGY*CVFLEG Trigger: GCCTTCCAGAAAAACGCAGCAGTAGCCTTCCTTATC...CATGCTCTGGTTATCGTGACCTTTCTGCTGTGGTGACTTGAATCCTGAGAGTCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000113794.8 |
||
| CDS-3UTR CCA 90 bp | ACCCTTTTATATGGACTCTCAGGATTCAAGTCACCACAGCAGAAAGGTCACGATGTGATGATGGGTCCTTaGGTGGTGAGACTCAGCACC | + |
|
Preference number: 4 (lower is better) Translates to: TLLYGLSGFKSPQQKGHDVMMGP*VVRLST Trigger: GGTGCTGAGTCTCACCACCCAAGGACCCATCATCAC...ATCGTGACCTTTCTGCTGTGGTGACTTGAATCCTGAGAGTCCATATAAAAGGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113794.8 |
||
| CDS-3UTR CCA 90 bp | TCATGTGTTCTTCTTTGTCCCTTTTTATTCAGCCTGGACCAGCCTACAGGATGGGCAGATCCAAACCCATaGCTGTTCTGCAGGCTGCAT | + |
|
Preference number: 4 (lower is better) Translates to: SCVLLCPFLFSLDQPTGWADPNP*LFCRLH Trigger: ATGCAGCCTGCAGAACAGCCATGGGTTTGGATCTGC...CCATCCTGTAGGCTGGTCCAGGCTGAATAAAAAGGGACAAAGAAGAACACATGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000113794.8 |
||
| CDS-3UTR TCA 90 bp | TTATACCCTTTTATATGGACTCTCAGGATTCAAGTCACCACAGCAGAAAGGTCAGGAAATATCCGGGAGTaGGGTCCAGCCCACGGCATA | + |
|
Preference number: 4 (lower is better) Translates to: LYPFIWTLRIQVTTAERSGNIRE*GPAHGI Trigger: TATGCCGTGGGCTGGACCTCACTCCCGGATATTTCC...TGACCTTTCTGCTGTGGTGACTTGAATCCTGAGAGTCCATATAAAAGGGTATAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113794.8 |
||
| CDS-3UTR TCA 90 bp | TACTGCATCCCTGAGCTCCAGCTGCCAGTTACTTACAAGATGCAGTTGAGTCTAACATTTCTGACCTTCTaGGGACTGGCGATGTCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: YCIPELQLPVTYKMQLSLTFLTF*GLAMSK Trigger: CTTTGACATCGCCAGTCCTCAGAAGGTCAGAAATGT...TAGACTCAACTGCATCTTGTAAGTAACTGGCAGCTGGAGCTCAGGGATGCAGTA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000163.13 ENSMUST00000081093.10 |
||
| CDS-3UTR TCA 90 bp | TACTGCATCCCTGAGCTCCAGCTGCCAGTTACTTACAAGATGCAGTTGAGTCTACTAAAGTCACATTTCTaGCCTTCTGAGGACTGGCGA | + |
|
Preference number: 4 (lower is better) Translates to: YCIPELQLPVTYKMQLSLLKSHF*PSEDWR Trigger: TCGCCAGTCCTCAGAAGGTCAGAAATGTGACTTTAG...TAGACTCAACTGCATCTTGTAAGTAACTGGCAGCTGGAGCTCAGGGATGCAGTA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000163.13 ENSMUST00000081093.10 |
||
| CDS-3UTR GCA 90 bp | TCTTTCTACCTTAGTTACACCTCTTTGAAAATACCCTTCAGAGTGTCTCCCGGGCCCGAGTCACTGGGCTaGACATCATGGATGATCAAC | + |
|
Preference number: 4 (lower is better) Translates to: SFYLSYTSLKIPFRVSPGPESLG*TSWMIN Trigger: GTTGATCATCCATGATGTGCAGCCCAGTGACTCGGG...CCCGGGAGACACTCTGAAGGGTATTTTCAAAGAGGTGTAACTAAGGTAGAAAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113794.8 |
||
| CDS-3UTR GCA 90 bp | ACCCTTTTATATGGACTCTCAGGATTCAAGTCACCACAGCAGAAAGGTCACGATAGGGTCCCCATGACTTaGACTGAGAGGAAGGCAGAT | + |
|
Preference number: 4 (lower is better) Translates to: TLLYGLSGFKSPQQKGHDRVPMT*TERKAD Trigger: ATCTGCCTTCCTCTCAGTGCAAGTCATGGGGACCCT...ATCGTGACCTTTCTGCTGTGGTGACTTGAATCCTGAGAGTCCATATAAAAGGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113794.8 |
||
| CDS-3UTR GCA 90 bp | TCTTTCTACCTTAGTTACACCTCTTTGAAAATACCCTTCAGAGTGTCTCCCGGGAGTCTGTGCAGCCTTTaGCTCATCCGAACTGTACCC | + |
|
Preference number: 4 (lower is better) Translates to: SFYLSYTSLKIPFRVSPGSLCSL*LIRTVP Trigger: GGGTACAGTTCGGATGAGGCAAAGGCTGCACAGACT...CCCGGGAGACACTCTGAAGGGTATTTTCAAAGAGGTGTAACTAAGGTAGAAAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113794.8 ENSMUST00000136292.2 |
||
| CDS-3UTR GCA 90 bp | TCTTTCTACCTTAGTTACACCTCTTTGAAAATACCCTTCAGAGTGTCTCCCGGGGAGAGATGCAGTCTGTaGAGCCTTTGCCTCATCCGA | + |
|
Preference number: 4 (lower is better) Translates to: SFYLSYTSLKIPFRVSPGERCSL*SLCLIR Trigger: TCGGATGAGGCAAAGGCTGCACAGACTGCATCTCTC...CCCGGGAGACACTCTGAAGGGTATTTTCAAAGAGGTGTAACTAAGGTAGAAAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000113794.8 ENSMUST00000136292.2 |
||
| CDS-3UTR GCA 90 bp | TCATGTGTTCTTCTTTGTCCCTTTTTATTCAGCCTGGACCAGCCTACAGGATGGTTTAGGAGGGAGAGATaGAGTCTGTGCAGCCTTTGC | + |
|
Preference number: 4 (lower is better) Translates to: SCVLLCPFLFSLDQPTGWFRRER*SLCSLC Trigger: GCAAAGGCTGCACAGACTGCATCTCTCCCTCCTAAA...CCATCCTGTAGGCTGGTCCAGGCTGAATAAAAAGGGACAAAGAAGAACACATGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000113794.8 |
||
| CDS-3UTR CCA 90 bp | TCATGTGTTCTTCTTTGTCCCTTTTTATTCAGCCTGGACCAGCCTACAGGATGGCTGGGCTGCACATCATaGATGATCAACTCCGAGATG | + |
|
Preference number: 4 (lower is better) Translates to: SCVLLCPFLFSLDQPTGWLGCTS*MINSEM Trigger: CATCTCGGAGTTGATCATCCATGATGTGCAGCCCAG...CCATCCTGTAGGCTGGTCCAGGCTGAATAAAAAGGGACAAAGAAGAACACATGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000113794.8 |
||
| CDS-3UTR CCA 90 bp | TACTGCATCCCTGAGCTCCAGCTGCCAGTTACTTACAAGATGCAGTTGAGTCTAACTGCTGCGTTTTTCTaGAAGGCTGACTTCAGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: YCIPELQLPVTYKMQLSLTAAFF*KADFSR Trigger: TCTGCTGAAGTCAGCCTTCCAGAAAAACGCAGCAGT...TAGACTCAACTGCATCTTGTAAGTAACTGGCAGCTGGAGCTCAGGGATGCAGTA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000000163.13 ENSMUST00000081093.10 |
||
| CDS-3UTR TCA 90 bp | GTTTCTGTAATAATGTTCAGTAACATCCCTAGCTGCGAAGTACACATAAAGACCTCAGCTGAGCCAGGATaGCCAGCACAGCCAGGACAT | + |
|
Preference number: 4 (lower is better) Translates to: VSVIMFSNIPSCEVHIKTSAEPG*PAQPGH Trigger: ATGTCCTGGCTGTGCTGGTCATCCTGGCTCAGCTGA...GGTCTTTATGTGTACTTCGCAGCTAGGGATGTTACTGAACATTATTACAGAAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000163.13 ENSMUST00000081093.10 |
||
| CDS-3UTR TCA 90 bp | GACCATATTACCATGATCTCAGACAACAGAAGCATTTTGAAGGTCGTTGCAGAAAGAAGCTTCCAGCCGTaGGTCACGGTGCAGTTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: DHITMISDNRSILKVVAERSFQP*VTVQLK Trigger: CTTCAACTGCACCGTGACTCACGGCTGGAAGCTTCT...TTCTGCAACGACCTTCAAAATGCTTCTGTTGTCTGAGATCATGGTAATATGGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000163.13 ENSMUST00000081093.10 |
||
| CDS-3UTR TCA 90 bp | GACCATATTACCATGATCTCAGACAACAGAAGCATTTTGAAGGTCGTTGCAGAATGGGTCCTTGGGTGGTaGGACTCAGCACCACCATTT | + |
|
Preference number: 4 (lower is better) Translates to: DHITMISDNRSILKVVAEWVLGW*DSAPPF Trigger: AAATGGTGGTGCTGAGTCTCACCACCCAAGGACCCA...TTCTGCAACGACCTTCAAAATGCTTCTGTTGTCTGAGATCATGGTAATATGGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000163.13 ENSMUST00000081093.10 |
||
| CDS-3UTR TCA 90 bp | GTTTCTGTAATAATGTTCAGTAACATCCCTAGCTGCGAAGTACACATAAAGACCCGTTGCCCAGTGGTGTaGGGTCCAGGACACTCAAGA | + |
|
Preference number: 4 (lower is better) Translates to: VSVIMFSNIPSCEVHIKTRCPVV*GPGHSR Trigger: TCTTGAGTGTCCTGGACCTCACACCACTGGGCAACG...GGTCTTTATGTGTACTTCGCAGCTAGGGATGTTACTGAACATTATTACAGAAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000163.13 |
||
| CDS-3UTR GCA 90 bp | GACCATATTACCATGATCTCAGACAACAGAAGCATTTTGAAGGTCGTTGCAGAACAAGGAAAAGGCCACTaGCAGCAGGATGATGGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: DHITMISDNRSILKVVAEQGKGH*QQDDGP Trigger: TGGGCCATCATCCTGCTGGCAGTGGCCTTTTCCTTG...TTCTGCAACGACCTTCAAAATGCTTCTGTTGTCTGAGATCATGGTAATATGGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000000163.13 ENSMUST00000081093.10 |
||
| CDS-3UTR GCA 90 bp | TACCCTTCAGAGTGTCTCCCGGGTGATTCCAAATCTAGTCAAGTAGTCAATCAATTTAGGAGGGAGAGATaGAGTCTGTGCAGCCTTTGC | + |
|
Preference number: 4 (lower is better) Translates to: YPSECLPGDSKSSQVVNQFRRER*SLCSLC Trigger: GCAAAGGCTGCACAGACTGCATCTCTCCCTCCTAAA...TTGATTGACTACTTGACTAGATTTGGAATCACCCGGGAGACACTCTGAAGGGTA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113794.8 ENSMUST00000136292.2 |
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| CDS-3UTR CCA 90 bp | GACCATATTACCATGATCTCAGACAACAGAAGCATTTTGAAGGTCGTTGCAGAAGTGATGATGGGTCCTTaGGTGGTGAGACTCAGCACC | + |
|
Preference number: 4 (lower is better) Translates to: DHITMISDNRSILKVVAEVMMGP*VVRLST Trigger: GGTGCTGAGTCTCACCACCCAAGGACCCATCATCAC...TTCTGCAACGACCTTCAAAATGCTTCTGTTGTCTGAGATCATGGTAATATGGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000163.13 ENSMUST00000081093.10 |
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| CDS-3UTR GCA 90 bp | TTATACCCTTTTATATGGACTCTCAGGATTCAAGTCACCACAGCAGAAAGGTCAAGTCTGTGCAGCCTTTaGCTCATCCGAACTGTACCC | + |
|
Preference number: 4 (lower is better) Translates to: LYPFIWTLRIQVTTAERSSLCSL*LIRTVP Trigger: GGGTACAGTTCGGATGAGGCAAAGGCTGCACAGACT...TGACCTTTCTGCTGTGGTGACTTGAATCCTGAGAGTCCATATAAAAGGGTATAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113794.8 |
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| CDS-3UTR GCA 90 bp | TCTTTCTACCTTAGTTACACCTCTTTGAAAATACCCTTCAGAGTGTCTCCCGGGGATAAGGAAGGCTACTaGTGCGTTTTTCTGGAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: SFYLSYTSLKIPFRVSPGDKEGY*CVFLEG Trigger: GCCTTCCAGAAAAACGCAGCAGTAGCCTTCCTTATC...CCCGGGAGACACTCTGAAGGGTATTTTCAAAGAGGTGTAACTAAGGTAGAAAGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000113794.8 ENSMUST00000136292.2 |
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| CDS-3UTR CCA 90 bp | ACCCTTTTATATGGACTCTCAGGATTCAAGTCACCACAGCAGAAAGGTCACGATCTTCCTTTTCTCTCCTaGAGGCACAACAGCAACAGA | + |
|
Preference number: 4 (lower is better) Translates to: TLLYGLSGFKSPQQKGHDLPFLS*RHNSNR Trigger: TCTGTTGCTGTTGTGCCTCCAGGAGAGAAAAGGAAG...ATCGTGACCTTTCTGCTGTGGTGACTTGAATCCTGAGAGTCCATATAAAAGGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113794.8 |
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| CDS-3UTR CCA 90 bp | TACCCTTCAGAGTGTCTCCCGGGTGATTCCAAATCTAGTCAAGTAGTCAATCAAACTGCTGCGTTTTTCTaGAAGGCTGACTTCAGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: YPSECLPGDSKSSQVVNQTAAFF*KADFSR Trigger: TCTGCTGAAGTCAGCCTTCCAGAAAAACGCAGCAGT...TTGATTGACTACTTGACTAGATTTGGAATCACCCGGGAGACACTCTGAAGGGTA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000113794.8 ENSMUST00000136292.2 |
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| CDS-3UTR CCA 90 bp | TCTTTCTACCTTAGTTACACCTCTTTGAAAATACCCTTCAGAGTGTCTCCCGGGCTCAGCACCACCATTTaGTTAAGAGTCCACATGAGA | + |
|
Preference number: 4 (lower is better) Translates to: SFYLSYTSLKIPFRVSPGLSTTI*LRVHMR Trigger: TCTCATGTGGACTCTTAACCAAATGGTGGTGCTGAG...CCCGGGAGACACTCTGAAGGGTATTTTCAAAGAGGTGTAACTAAGGTAGAAAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113794.8 |
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| CDS-3UTR CCA 90 bp | GACCATATTACCATGATCTCAGACAACAGAAGCATTTTGAAGGTCGTTGCAGAACTGGGCTGCACATCATaGATGATCAACTCCGAGATG | + |
|
Preference number: 4 (lower is better) Translates to: DHITMISDNRSILKVVAELGCTS*MINSEM Trigger: CATCTCGGAGTTGATCATCCATGATGTGCAGCCCAG...TTCTGCAACGACCTTCAAAATGCTTCTGTTGTCTGAGATCATGGTAATATGGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000163.13 ENSMUST00000081093.10 |
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| CDS-3UTR TCA 90 bp | ACCCTTTTATATGGACTCTCAGGATTCAAGTCACCACAGCAGAAAGGTCACGATTTTTTCAGATTGTTGTaGACCTTGGACCTCTCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: TLLYGLSGFKSPQQKGHDFFRLL*TLDLSA Trigger: TGCTGAGAGGTCCAAGGTTCACAACAATCTGAAAAA...ATCGTGACCTTTCTGCTGTGGTGACTTGAATCCTGAGAGTCCATATAAAAGGGT 43% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000113794.8 |
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| CDS-3UTR TCA 90 bp | TACCCTTCAGAGTGTCTCCCGGGTGATTCCAAATCTAGTCAAGTAGTCAATCAATTTTTCAGATTGTTGTaGACCTTGGACCTCTCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: YPSECLPGDSKSSQVVNQFFRLL*TLDLSA Trigger: TGCTGAGAGGTCCAAGGTTCACAACAATCTGAAAAA...TTGATTGACTACTTGACTAGATTTGGAATCACCCGGGAGACACTCTGAAGGGTA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000113794.8 ENSMUST00000136292.2 |
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| CDS-3UTR GCA 90 bp | GTTTCTGTAATAATGTTCAGTAACATCCCTAGCTGCGAAGTACACATAAAGACCTTTAGGAGGGAGAGATaGAGTCTGTGCAGCCTTTGC | + |
|
Preference number: 4 (lower is better) Translates to: VSVIMFSNIPSCEVHIKTFRRER*SLCSLC Trigger: GCAAAGGCTGCACAGACTGCATCTCTCCCTCCTAAA...GGTCTTTATGTGTACTTCGCAGCTAGGGATGTTACTGAACATTATTACAGAAAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000163.13 ENSMUST00000081093.10 |
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| CDS-3UTR TCA 90 bp | GTTTCTGTAATAATGTTCAGTAACATCCCTAGCTGCGAAGTACACATAAAGACCCTAAAGTCACATTTCTaGCCTTCTGAGGACTGGCGA | + |
|
Preference number: 4 (lower is better) Translates to: VSVIMFSNIPSCEVHIKTLKSHF*PSEDWR Trigger: TCGCCAGTCCTCAGAAGGTCAGAAATGTGACTTTAG...GGTCTTTATGTGTACTTCGCAGCTAGGGATGTTACTGAACATTATTACAGAAAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000163.13 ENSMUST00000081093.10 |
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| CDS-3UTR TCA 90 bp | GACCATATTACCATGATCTCAGACAACAGAAGCATTTTGAAGGTCGTTGCAGAAAATACTGTCTTGCACTaGGAGGAAGGCAGATCCAAA | + |
|
Preference number: 4 (lower is better) Translates to: DHITMISDNRSILKVVAENTVLH*EEGRSK Trigger: TTTGGATCTGCCTTCCTCTCAGTGCAAGACAGTATT...TTCTGCAACGACCTTCAAAATGCTTCTGTTGTCTGAGATCATGGTAATATGGTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000081093.10 |
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| CDS-3UTR CCA 90 bp | GACCATATTACCATGATCTCAGACAACAGAAGCATTTTGAAGGTCGTTGCAGAACTCAGCACCACCATTTaGTTAAGAGTCCACATGAGA | + |
|
Preference number: 4 (lower is better) Translates to: DHITMISDNRSILKVVAELSTTI*LRVHMR Trigger: TCTCATGTGGACTCTTAACCAAATGGTGGTGCTGAG...TTCTGCAACGACCTTCAAAATGCTTCTGTTGTCTGAGATCATGGTAATATGGTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000163.13 ENSMUST00000081093.10 |
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| CDS TCA 90 bp | CCAGGTCGGCAGTGCTGGGCCTTCCTCTCCAATACTGTCTTGCACTaGGAGGAAGGCAGATCCAAACCCATGGCTGTTCTGCAGGCTGCA | + |
|
Preference number: 5 (lower is better) Translates to: PGRQCWAFLSNTVLH*EEGRSKPMAVLQAA Trigger: TGCAGCCTGCAGAACAGCCATGGGTTTGGATCTGCCTTCCTCTCAGTGCAAGACAGTATTGGAGAGGAAGGCCCAGCACTGCCGACCTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081093.10 |
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| CDS CCA 90 bp | CAAGTCCTTCAGCTCTGCCACACAAGTCAAGGTCCCGTTGCCCAGTaGTGTGAGGTCCAGGACACTCAAGACCCTCATAAAGTTGCCCGG | + |
|
Preference number: 5 (lower is better) Translates to: QVLQLCHTSQGPVAQ*CEVQDTQDPHKVAR Trigger: CCGGGCAACTTTATGAGGGTCTTGAGTGTCCTGGACCTCACACCACTGGGCAACGGGACCTTGACTTGTGTGGCAGAGCTGAAGGACTTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000163.13 ENSMUST00000113794.8 |
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| CDS TCA 90 bp | CGAATGGCTTACGGGAACCTCAAGCTCCCAGGAAATATCCGGGAGTaGGGTCCAGCCCACGGCATAGCAAGTCACATTACAGGGTTCACC | + |
|
Preference number: 5 (lower is better) Translates to: RMAYGNLKLPGNIRE*GPAHGIASHITGFT Trigger: GGTGAACCCTGTAATGTGACTTGCTATGCCGTGGGCTGGACCTCACTCCCGGATATTTCCTGGGAGCTTGAGGTTCCCGTAAGCCATTCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000163.13 ENSMUST00000113794.8 |
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| CDS GCA 90 bp | TATAATCAAAACAATGATCAGGATCAAGAGCAAGGAAAAGGCCACTaGCAGCAGGATGATGGCCCAGGTCGGCAGTGCTGGGCCTTCCTC | + |
|
Preference number: 5 (lower is better) Translates to: YNQNNDQDQEQGKGH*QQDDGPGRQCWAFL Trigger: GAGGAAGGCCCAGCACTGCCGACCTGGGCCATCATCCTGCTGGCAGTGGCCTTTTCCTTGCTCTTGATCCTGATCATTGTTTTGATTATA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000000163.13 ENSMUST00000081093.10 ENSMUST00000113794.8 |
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| CDS-3UTR CAA 90 bp | GACGAGGATCAGGGCGCACATGGGGATGACTGTCTTGCGGAGAGCATTGGGACCTTCCACTTTTTAACTTaGTCTCCGGATCTGCTTTGT | + |
|
Preference number: 5 (lower is better) Translates to: DEDQGAHGDDCLAESIGTFHFLT*SPDLLC Trigger: ACAAAGCAGATCCGGAGACAAAGTTAAAAAGTGGAA...GGTCCCAATGCTCTCCGCAAGACAGTCATCCCCATGTGCGCCCTGATCCTCGTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000000163.13 ENSMUST00000081093.10 |
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| CDS GCA 90 bp | TGGAAGGCTGACTTCAGCAGATTTAGGAGGGAGAGATGCAGTCTGTaGAGCCTTTGCCTCATCCGAACTGTACCCGTAGTTTTCCTTTCC | + |
|
Preference number: 5 (lower is better) Translates to: WKADFSRFRRERCSL*SLCLIRTVPVVFLS Trigger: GGAAAGGAAAACTACGGGTACAGTTCGGATGAGGCAAAGGCTGCACAGACTGCATCTCTCCCTCCTAAATCTGCTGAAGTCAGCCTTCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000000163.13 ENSMUST00000081093.10 ENSMUST00000113794.8 ENSMUST00000136292.2 |
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| CDS-3UTR CAA 90 bp | TTCACCTACAACTGTGGTGACGAGGATCAGGGCGCACATGGGGATGACTGTCTTGTCTCCGGATCTGCTTaGTTTGTCCTCATGTTTGCA | + |
|
Preference number: 5 (lower is better) Translates to: FTYNCGDEDQGAHGDDCLVSGSA*FVLMFA Trigger: TGCAAACATGAGGACAAACAAAGCAGATCCGGAGAC...AAGACAGTCATCCCCATGTGCGCCCTGATCCTCGTCACCACAGTTGTAGGTGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000163.13 ENSMUST00000081093.10 |
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| CDS CCA 90 bp | CTTCTGAGGACTGGCGATGTCAAAGGAAACCCGTGGATGAGTTGCTaGACCGGGCTGATGTTTATTGAGTTCCTGATAAGGAAGGCTACT | + |
|
Preference number: 5 (lower is better) Translates to: LLRTGDVKGNPWMSC*TGLMFIEFLIRKAT Trigger: AGTAGCCTTCCTTATCAGGAACTCAATAAACATCAGCCCGGTCCAGCAACTCATCCACGGGTTTCCTTTGACATCGCCAGTCCTCAGAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000163.13 ENSMUST00000081093.10 |
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| CDS-3UTR CAA 90 bp | GTTCTTCTTTGTCCCTTTTTATTCAGCCTGGACCAGCCTACAGGATGGCACTGCGTCTCCGGATCTGCTTaGTTTGTCCTCATGTTTGCA | + |
|
Preference number: 5 (lower is better) Translates to: VLLCPFLFSLDQPTGWHCVSGSA*FVLMFA Trigger: TGCAAACATGAGGACAAACAAAGCAGATCCGGAGAC...GCAGTGCCATCCTGTAGGCTGGTCCAGGCTGAATAAAAAGGGACAAAGAAGAAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000113794.8 |
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| CDS-3UTR CAA 90 bp | TACTGCATCCCTGAGCTCCAGCTGCCAGTTACTTACAAGATGCAGTTGAGTCTATCAGTGACTATAAGGTaGTTGCTAGGAATGTTCAGG | + |
|
Preference number: 5 (lower is better) Translates to: YCIPELQLPVTYKMQLSLSVTIR*LLGMFR Trigger: CCTGAACATTCCTAGCAACAACCTTATAGTCACTGA...TAGACTCAACTGCATCTTGTAAGTAACTGGCAGCTGGAGCTCAGGGATGCAGTA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000163.13 |
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| CDS-3UTR CAA 90 bp | GTTCTTCTTTGTCCCTTTTTATTCAGCCTGGACCAGCCTACAGGATGGCACTGCTTCCACTTTTTAACTTaGTCTCCGGATCTGCTTTGT | + |
|
Preference number: 5 (lower is better) Translates to: VLLCPFLFSLDQPTGWHCFHFLT*SPDLLC Trigger: ACAAAGCAGATCCGGAGACAAAGTTAAAAAGTGGAA...GCAGTGCCATCCTGTAGGCTGGTCCAGGCTGAATAAAAAGGGACAAAGAAGAAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000113794.8 |
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| CDS-3UTR CAA 90 bp | ACCCTTTTATATGGACTCTCAGGATTCAAGTCACCACAGCAGAAAGGTCACGATTCAGTGACTATAAGGTaGTTGCTAGGAATGTTCAGG | + |
|
Preference number: 5 (lower is better) Translates to: TLLYGLSGFKSPQQKGHDSVTIR*LLGMFR Trigger: CCTGAACATTCCTAGCAACAACCTTATAGTCACTGA...ATCGTGACCTTTCTGCTGTGGTGACTTGAATCCTGAGAGTCCATATAAAAGGGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113794.8 |
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| CDS-3UTR CAA 90 bp | GACCATATTACCATGATCTCAGACAACAGAAGCATTTTGAAGGTCGTTGCAGAAGTCTCCGGATCTGCTTaGTTTGTCCTCATGTTTGCA | + |
|
Preference number: 5 (lower is better) Translates to: DHITMISDNRSILKVVAEVSGSA*FVLMFA Trigger: TGCAAACATGAGGACAAACAAAGCAGATCCGGAGAC...TTCTGCAACGACCTTCAAAATGCTTCTGTTGTCTGAGATCATGGTAATATGGTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000163.13 ENSMUST00000081093.10 |
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| CDS-3UTR CAA 90 bp | GACCATATTACCATGATCTCAGACAACAGAAGCATTTTGAAGGTCGTTGCAGAATTCCACTTTTTAACTTaGTCTCCGGATCTGCTTTGT | + |
|
Preference number: 5 (lower is better) Translates to: DHITMISDNRSILKVVAEFHFLT*SPDLLC Trigger: ACAAAGCAGATCCGGAGACAAAGTTAAAAAGTGGAA...TTCTGCAACGACCTTCAAAATGCTTCTGTTGTCTGAGATCATGGTAATATGGTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000000163.13 ENSMUST00000081093.10 |
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| CDS GCA 72 bp | GGCCACTGCCAGCAGGATGATGGCCCAGGTCGGCAGTaGTGGGCCTTCCTCTCCAATACTGTCAGGTGGAGG | + |
|
Preference number: 6 (lower is better) Translates to: GHCQQDDGPGRQ*WAFLSNTVRWR Trigger: CCTCCACCTGACAGTATTGGAGAGGAAGGCCCAGCACTGCCGACCTGGGCCATCATCCTGCTGGCAGTGGCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000163.13 ENSMUST00000113794.8 |
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| CDS CCA 72 bp | CACTGCCAGCAGGATGATGGCCCAGGTCGGCAGTGCTaGGCCTTCCTCTCCAATACTGTCAGGTGGAGGCTG | + |
|
Preference number: 6 (lower is better) Translates to: HCQQDDGPGRQC*AFLSNTVRWRL Trigger: CAGCCTCCACCTGACAGTATTGGAGAGGAAGGCCCAGCACTGCCGACCTGGGCCATCATCCTGCTGGCAGTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000163.13 ENSMUST00000113794.8 |
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| CDS TCA 72 bp | GGATCAAGAGCAAGGAAAAGGCCACTGCCAGCAGGATaGTGGCCCAGGTCGGCAGTGCTGGGCCTTCCTCTC | + |
|
Preference number: 6 (lower is better) Translates to: GSRARKRPLPAG*WPRSAVLGLPL Trigger: GAGAGGAAGGCCCAGCACTGCCGACCTGGGCCATCATCCTGCTGGCAGTGGCCTTTTCCTTGCTCTTGATCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000000163.13 ENSMUST00000081093.10 ENSMUST00000113794.8 |
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| CDS CCA 72 bp | CTGTCTTGCACTGAGAGGAAGGCAGATCCAAACCCATaGCTGTTCTGCAGGCTGCATTGCACGGATCCCGAG | + |
|
Preference number: 6 (lower is better) Translates to: LSCTERKADPNP*LFCRLHCTDPE Trigger: CTCGGGATCCGTGCAATGCAGCCTGCAGAACAGCCATGGGTTTGGATCTGCCTTCCTCTCAGTGCAAGACAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081093.10 |
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| CDS GCA 72 bp | TGCAGGCTGCATTGCACGGATCCCGAGTCACTGGGCTaGACATCATGGATGATCAACTCCGAGATGAAGCTG | + |
|
Preference number: 6 (lower is better) Translates to: CRLHCTDPESLG*TSWMINSEMKL Trigger: CAGCTTCATCTCGGAGTTGATCATCCATGATGTGCAGCCCAGTGACTCGGGATCCGTGCAATGCAGCCTGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000000163.13 ENSMUST00000081093.10 ENSMUST00000113794.8 |
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| CDS CCA 72 bp | ATGACTTGCACTGAGAGGAAGGCAGATCCAAACCCATaGCTGTTCTGCAGGCTGCATTGCACGGATCCCGAG | + |
|
Preference number: 6 (lower is better) Translates to: MTCTERKADPNP*LFCRLHCTDPE Trigger: CTCGGGATCCGTGCAATGCAGCCTGCAGAACAGCCATGGGTTTGGATCTGCCTTCCTCTCAGTGCAAGTCAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000163.13 ENSMUST00000113794.8 |
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| CDS CCA 72 bp | CAGCTCTGCCACACAAGTCAAGGTCCCGTTGCCCAGTaGTGTGAGGTCCAGGACACTCAAGACCCTCATAAA | + |
|
Preference number: 6 (lower is better) Translates to: QLCHTSQGPVAQ*CEVQDTQDPHK Trigger: TTTATGAGGGTCTTGAGTGTCCTGGACCTCACACCACTGGGCAACGGGACCTTGACTTGTGTGGCAGAGCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000163.13 ENSMUST00000113794.8 |
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| CDS TCA 72 bp | TACGGGAACCTCAAGCTCCCAGGAAATATCCGGGAGTaGGGTCCAGCCCACGGCATAGCAAGTCACATTACA | + |
|
Preference number: 6 (lower is better) Translates to: YGNLKLPGNIRE*GPAHGIASHIT Trigger: TGTAATGTGACTTGCTATGCCGTGGGCTGGACCTCACTCCCGGATATTTCCTGGGAGCTTGAGGTTCCCGTA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000163.13 ENSMUST00000113794.8 |
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| CDS TCA 72 bp | GCTGGGCCTTCCTCTCCAATACTGTCAGGTGGAGGCTaGACCACAGTCAGGTTGACAGTTAAGGACTTGCTG | + |
|
Preference number: 6 (lower is better) Translates to: AGPSSPILSGGG*TTVRLTVKDLL Trigger: CAGCAAGTCCTTAACTGTCAACCTGACTGTGGTTCAGCCTCCACCTGACAGTATTGGAGAGGAAGGCCCAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000163.13 ENSMUST00000113794.8 |
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| CDS TCA 72 bp | CAGTGCTGGGCCTTCCTCTCCAATACTGTCTTGCACTaGGAGGAAGGCAGATCCAAACCCATGGCTGTTCTG | + |
|
Preference number: 6 (lower is better) Translates to: QCWAFLSNTVLH*EEGRSKPMAVL Trigger: CAGAACAGCCATGGGTTTGGATCTGCCTTCCTCTCAGTGCAAGACAGTATTGGAGAGGAAGGCCCAGCACTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081093.10 |
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| CDS CAA 72 bp | GATGGGTCCTTGGGTGGTGAGACTCAGCACCACCATTaGGTTAAGAGTCCACATGAGAAGCTTCCAGCCGTG | + |
|
Preference number: 6 (lower is better) Translates to: DGSLGGETQHHH*VKSPHEKLPAV Trigger: CACGGCTGGAAGCTTCTCATGTGGACTCTTAACCAAATGGTGGTGCTGAGTCTCACCACCCAAGGACCCATC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000000163.13 ENSMUST00000081093.10 ENSMUST00000113794.8 |
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| CDS CAA 90 bp | GTTGGTGATGATGGGTCCTTGGGTGGTGAGACTCAGCACCACCATTaGGTTAAGAGTCCACATGAGAAGCTTCCAGCCGTGAGTCACGGT | + |
|
Preference number: 6 (lower is better) Translates to: VGDDGSLGGETQHHH*VKSPHEKLPAVSHG Trigger: ACCGTGACTCACGGCTGGAAGCTTCTCATGTGGACTCTTAACCAAATGGTGGTGCTGAGTCTCACCACCCAAGGACCCATCATCACCAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000000163.13 ENSMUST00000081093.10 ENSMUST00000113794.8 |
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| CDS GCA 72 bp | ACCACAGTCAGGTTGACAGTTAAGGACTTGCTGGCCTaGAAGTCCTTCAGCTCTGCCACACAAGTCAAGGTC | + |
|
Preference number: 6 (lower is better) Translates to: TTVRLTVKDLLA*KSFSSATQVKV Trigger: GACCTTGACTTGTGTGGCAGAGCTGAAGGACTTGCAGGCCAGCAAGTCCTTAACTGTCAACCTGACTGTGGT 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000163.13 ENSMUST00000113794.8 |
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| CDS TCA 72 bp | CAATACTGTCAGGTGGAGGCTGAACCACAGTCAGGTTaGCAGTTAAGGACTTGCTGGCCTGCAAGTCCTTCA | + |
|
Preference number: 6 (lower is better) Translates to: QYCQVEAEPQSG*QLRTCWPASPS Trigger: TGAAGGACTTGCAGGCCAGCAAGTCCTTAACTGTCAACCTGACTGTGGTTCAGCCTCCACCTGACAGTATTG 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000163.13 ENSMUST00000113794.8 |
||
| CDS GCA 72 bp | GACTTCAGCAGATTTAGGAGGGAGAGATGCAGTCTGTaGAGCCTTTGCCTCATCCGAACTGTACCCGTAGTT | + |
|
Preference number: 6 (lower is better) Translates to: DFSRFRRERCSL*SLCLIRTVPVV Trigger: AACTACGGGTACAGTTCGGATGAGGCAAAGGCTGCACAGACTGCATCTCTCCCTCCTAAATCTGCTGAAGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000000163.13 ENSMUST00000081093.10 ENSMUST00000113794.8 ENSMUST00000136292.2 |
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| CDS GCA 72 bp | TGGAAGGCTGACTTCAGCAGATTTAGGAGGGAGAGATaGAGTCTGTGCAGCCTTTGCCTCATCCGAACTGTA | + |
|
Preference number: 6 (lower is better) Translates to: WKADFSRFRRER*SLCSLCLIRTV Trigger: TACAGTTCGGATGAGGCAAAGGCTGCACAGACTGCATCTCTCCCTCCTAAATCTGCTGAAGTCAGCCTTCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000000163.13 ENSMUST00000081093.10 ENSMUST00000113794.8 ENSMUST00000136292.2 |
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| CDS GCA 72 bp | AGGACTGGCGATGTCAAAGGAAACCCGTGGATGAGTTaGTGGACCGGGCTGATGTTTATTGAGTTCCTGATA | + |
|
Preference number: 6 (lower is better) Translates to: RTGDVKGNPWMS*WTGLMFIEFLI Trigger: TATCAGGAACTCAATAAACATCAGCCCGGTCCAGCAACTCATCCACGGGTTTCCTTTGACATCGCCAGTCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000163.13 ENSMUST00000081093.10 |
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| CDS CCA 72 bp | ACTGGCGATGTCAAAGGAAACCCGTGGATGAGTTGCTaGACCGGGCTGATGTTTATTGAGTTCCTGATAAGG | + |
|
Preference number: 6 (lower is better) Translates to: TGDVKGNPWMSC*TGLMFIEFLIR Trigger: CCTTATCAGGAACTCAATAAACATCAGCCCGGTCCAGCAACTCATCCACGGGTTTCCTTTGACATCGCCAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000163.13 ENSMUST00000081093.10 |
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| CDS CAA 72 bp | GTCACATTACAGGGTTCACCCTCAGTGACTATAAGGTaGTTGCTAGGAATGTTCAGGGTCCCCATGACTTGC | + |
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Preference number: 6 (lower is better) Translates to: VTLQGSPSVTIR*LLGMFRVPMTC Trigger: GCAAGTCATGGGGACCCTGAACATTCCTAGCAACAACCTTATAGTCACTGAGGGTGAACCCTGTAATGTGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000163.13 ENSMUST00000113794.8 |
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| CDS CAA 72 bp | ACATTACAGGGTTCACCCTCAGTGACTATAAGGTTGTaGCTAGGAATGTTCAGGGTCCCCATGACTTGCACT | + |
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Preference number: 6 (lower is better) Translates to: TLQGSPSVTIRL*LGMFRVPMTCT Trigger: AGTGCAAGTCATGGGGACCCTGAACATTCCTAGCAACAACCTTATAGTCACTGAGGGTGAACCCTGTAATGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000163.13 ENSMUST00000113794.8 |
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| CDS TCA 72 bp | AGTCCTTTAGGACTGTTACATTCTGAGGACCTTCTATaGTCTGATAACTGGATCCGGAAGCTGTCAGCTGAG | + |
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Preference number: 6 (lower is better) Translates to: SPLGLLHSEDLL*SDNWIRKLSAE Trigger: CTCAGCTGACAGCTTCCGGATCCAGTTATCAGATCATAGAAGGTCCTCAGAATGTAACAGTCCTAAAGGACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000000163.13 ENSMUST00000081093.10 ENSMUST00000113794.8 |
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| CDS CAA 72 bp | TCCTTTCCACTTTTTAACTTTGTCTCCGGATCTGCTTaGTTTGTCCTCATGTTTGCAGATTTCCTTATTTCA | + |
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Preference number: 6 (lower is better) Translates to: SFPLFNFVSGSA*FVLMFADFLIS Trigger: TGAAATAAGGAAATCTGCAAACATGAGGACAAACAAAGCAGATCCGGAGACAAAGTTAAAAAGTGGAAAGGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000000163.13 ENSMUST00000081093.10 ENSMUST00000113794.8 |
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