Pregenerated sensors for IGSF23 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000040498Ensembl transcript IDs: ENSMUST00000043440.8, ENSMUST00000208974.2
Found 70 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GGTGGGTTGAGAGCAGGAAGAGGTAGAGCCAGGGCCCCCACCTCTTaGGCCGGTCATGTGACTTCCTCCAGCCAATGGGATGGCAACGAT | + |
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Preference number: 1 (lower is better) Translates to: GGLRAGRGRARAPTS*AGHVTSSSQWDGND Trigger: ATCGTTGCCATCCCATTGGCTGGAGGAAGTCACATGACCGGCCCAAGAGGTGGGGGCCCTGGCTCTACCTCTTCCTGCTCTCAACCCACC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000043440.8 ENSMUST00000208974.2 |
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| 3UTR CCA 90 bp | GGAATGCCAGCTGTTTCCACTGATGTTGCCCCTCCAGACAGTCACTaGACCACAGATACTGCAGCAAGCCCCCACCTGCCGAGCCTAACC | + |
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Preference number: 1 (lower is better) Translates to: GMPAVSTDVAPPDSH*TTDTAASPHLPSLT Trigger: GGTTAGGCTCGGCAGGTGGGGGCTTGCTGCAGTATCTGTGGTCCAGTGACTGTCTGGAGGGGCAACATCAGTGGAAACAGCTGGCATTCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000043440.8 ENSMUST00000208974.2 |
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| 3UTR GCA 90 bp | AAGCCCCCACCTGCCGAGCCTAACCTACAGCCGAAGCCACAGAATTaGAATCGGCACAAATGGCTGTTATTTCAAGCTGCTAGATTCCAG | + |
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Preference number: 1 (lower is better) Translates to: KPPPAEPNLQPKPQN*NRHKWLLFQAARFQ Trigger: CTGGAATCTAGCAGCTTGAAATAACAGCCATTTGTGCCGATTGCAATTCTGTGGCTTCGGCTGTAGGTTAGGCTCGGCAGGTGGGGGCTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000043440.8 ENSMUST00000208974.2 |
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| 3UTR CCA 90 bp | GCAATTCGTTACCTTGCTGAGGCTGACAGATACACCCTTGGATTCTaGGAAATCTTCATGACTTCTGTCAAATTCTTCCTCCTGTTCTCC | + |
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Preference number: 1 (lower is better) Translates to: AIRYLAEADRYTLGF*EIFMTSVKFFLLFS Trigger: GGAGAACAGGAGGAAGAATTTGACAGAAGTCATGAAGATTTCCCAGAATCCAAGGGTGTATCTGTCAGCCTCAGCAAGGTAACGAATTGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043440.8 ENSMUST00000208974.2 |
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| 3UTR-3UTR TCA 90 bp | CAGGGCCCCCACCTCTTGGGCCGGTCATGTGACTTCCTCCAGCCAATGGGATGGGGAATAGGTGGACTGTaGAGATGGGGTGTTGGCAGC | + |
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Preference number: 2 (lower is better) Translates to: QGPHLLGRSCDFLQPMGWGIGGL*RWGVGS Trigger: GCTGCCAACACCCCATCTTCACAGTCCACCTATTCC...CCATCCCATTGGCTGGAGGAAGTCACATGACCGGCCCAAGAGGTGGGGGCCCTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000043440.8 ENSMUST00000208974.2 |
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| 3UTR-3UTR GCA 90 bp | TCACTGGACCACAGATACTGCAGCAAGCCCCCACCTGCCGAGCCTAACCTACAGCCGAAGCCACAGAATTaGAATCGGCACAAATGGCTG | + |
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Preference number: 2 (lower is better) Translates to: SLDHRYCSKPPPAEPNLQPKPQN*NRHKWL Trigger: CAGCCATTTGTGCCGATTGCAATTCTGTGGCTTCGG...CTGTAGGTTAGGCTCGGCAGGTGGGGGCTTGCTGCAGTATCTGTGGTCCAGTGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000043440.8 ENSMUST00000208974.2 |
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| 3UTR-3UTR CCA 90 bp | CAGGGCCCCCACCTCTTGGGCCGGTCATGTGACTTCCTCCAGCCAATGGGATGGTGCAATCGGCACAAATaGCTGTTATTTCAAGCTGCT | + |
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Preference number: 2 (lower is better) Translates to: QGPHLLGRSCDFLQPMGWCNRHK*LLFQAA Trigger: AGCAGCTTGAAATAACAGCCATTTGTGCCGATTGCA...CCATCCCATTGGCTGGAGGAAGTCACATGACCGGCCCAAGAGGTGGGGGCCCTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000043440.8 ENSMUST00000208974.2 |
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| 3UTR-3UTR TCA 90 bp | GCTGTTTCCACTGATGTTGCCCCTCCAGACAGTCACTGGACCACAGATACTGCACATGTCTTCCTGTCCTaGGACTCCTGTCCTGGGATC | + |
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Preference number: 2 (lower is better) Translates to: AVSTDVAPPDSHWTTDTAHVFLS*DSCPGI Trigger: GATCCCAGGACAGGAGTCTCAGGACAGGAAGACATG...TGCAGTATCTGTGGTCCAGTGACTGTCTGGAGGGGCAACATCAGTGGAAACAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043440.8 ENSMUST00000208974.2 |
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| 3UTR-3UTR CCA 90 bp | CAGGGCCCCCACCTCTTGGGCCGGTCATGTGACTTCCTCCAGCCAATGGGATGGTACACCCTTGGATTCTaGGAAATCTTCATGACTTCT | + |
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Preference number: 2 (lower is better) Translates to: QGPHLLGRSCDFLQPMGWYTLGF*EIFMTS Trigger: AGAAGTCATGAAGATTTCCCAGAATCCAAGGGTGTA...CCATCCCATTGGCTGGAGGAAGTCACATGACCGGCCCAAGAGGTGGGGGCCCTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000043440.8 ENSMUST00000208974.2 |
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| 3UTR-3UTR CCA 90 bp | CCAGGGAGTTTCTCTTGTTTGCAGTCCACGAGGCAGAAGAATAGAGACAGTGTTCTGAGACTCCTGTCCTaGGATCGGCTTCGGGTAGAG | + |
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Preference number: 2 (lower is better) Translates to: PGSFSCLQSTRQKNRDSVLRLLS*DRLRVE Trigger: CTCTACCCGAAGCCGATCCCAGGACAGGAGTCTCAG...AACACTGTCTCTATTCTTCTGCCTCGTGGACTGCAAACAAGAGAAACTCCCTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043440.8 ENSMUST00000208974.2 |
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| 3UTR CAA 90 bp | GTTCTCCCTCCCCTCCCTTCAACTAAGCCAGGGAGTTTCTCTTGTTaGCAGTCCACGAGGCAGAAGAATAGAGACAGTGTTCCCGGAATA | + |
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Preference number: 2 (lower is better) Translates to: VLPPLPSTKPGSFSC*QSTRQKNRDSVPGI Trigger: TATTCCGGGAACACTGTCTCTATTCTTCTGCCTCGTGGACTGCAAACAAGAGAAACTCCCTGGCTTAGTTGAAGGGAGGGGAGGGAGAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043440.8 ENSMUST00000208974.2 |
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| 3UTR-3UTR TCA 90 bp | AATCGGTTGGCGTTTACCTTTCTGAACATAAGAGGACACCAAGGAATGCCAGCTGGAATAGGTGGACTGTaGAGATGGGGTGTTGGCAGC | + |
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Preference number: 2 (lower is better) Translates to: NRLAFTFLNIRGHQGMPAGIGGL*RWGVGS Trigger: GCTGCCAACACCCCATCTTCACAGTCCACCTATTCC...AGCTGGCATTCCTTGGTGTCCTCTTATGTTCAGAAAGGTAAACGCCAACCGATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043440.8 ENSMUST00000208974.2 |
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| 3UTR-3UTR TCA 90 bp | AGGTGCTTTGGGCAGGCAAATAAGGACAGAGACACATCTTTACAAAGTGTACAACTTGGGCCGGTCATGTaGCTTCCTCCAGCCAATGGG | + |
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Preference number: 2 (lower is better) Translates to: RCFGQANKDRDTSLQSVQLGPVM*LPPANG Trigger: CCCATTGGCTGGAGGAAGTCACATGACCGGCCCAAG...TTGTACACTTTGTAAAGATGTGTCTCTGTCCTTATTTGCCTGCCCAAAGCACCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043440.8 ENSMUST00000208974.2 |
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| 3UTR-3UTR GCA 90 bp | ATCAGAAGGTGCTTTGGGCAGGCAAATAAGGACAGAGACACATCTTTACAAAGTCTGGACCACAGATACTaGAGCAAGCCCCCACCTGCC | + |
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Preference number: 2 (lower is better) Translates to: IRRCFGQANKDRDTSLQSLDHRY*SKPPPA Trigger: GGCAGGTGGGGGCTTGCTGCAGTATCTGTGGTCCAG...ACTTTGTAAAGATGTGTCTCTGTCCTTATTTGCCTGCCCAAAGCACCTTCTGAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000043440.8 ENSMUST00000208974.2 |
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| 3UTR-3UTR CCA 90 bp | CACAGAATTGCAATCGGCACAAATGGCTGTTATTTCAAGCTGCTAGATTCCAGACTGAGACTCCTGTCCTaGGATCGGCTTCGGGTAGAG | + |
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Preference number: 2 (lower is better) Translates to: HRIAIGTNGCYFKLLDSRLRLLS*DRLRVE Trigger: CTCTACCCGAAGCCGATCCCAGGACAGGAGTCTCAG...TCTGGAATCTAGCAGCTTGAAATAACAGCCATTTGTGCCGATTGCAATTCTGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043440.8 ENSMUST00000208974.2 |
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| 3UTR-3UTR TCA 90 bp | AGGTGCTTTGGGCAGGCAAATAAGGACAGAGACACATCTTTACAAAGTGTACAACATGTCTTCCTGTCCTaGGACTCCTGTCCTGGGATC | + |
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Preference number: 2 (lower is better) Translates to: RCFGQANKDRDTSLQSVQHVFLS*DSCPGI Trigger: GATCCCAGGACAGGAGTCTCAGGACAGGAAGACATG...TTGTACACTTTGTAAAGATGTGTCTCTGTCCTTATTTGCCTGCCCAAAGCACCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043440.8 ENSMUST00000208974.2 |
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| 3UTR-3UTR CCA 90 bp | ATCAGAAGGTGCTTTGGGCAGGCAAATAAGGACAGAGACACATCTTTACAAAGTACTTCCTCCAGCCAATaGGATGGCAACGATGGTGTT | + |
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Preference number: 2 (lower is better) Translates to: IRRCFGQANKDRDTSLQSTSSSQ*DGNDGV Trigger: AACACCATCGTTGCCATCCCATTGGCTGGAGGAAGT...ACTTTGTAAAGATGTGTCTCTGTCCTTATTTGCCTGCCCAAAGCACCTTCTGAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043440.8 ENSMUST00000208974.2 |
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| 3UTR-3UTR CCA 90 bp | ATCAGAAGGTGCTTTGGGCAGGCAAATAAGGACAGAGACACATCTTTACAAAGTTACACCCTTGGATTCTaGGAAATCTTCATGACTTCT | + |
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Preference number: 2 (lower is better) Translates to: IRRCFGQANKDRDTSLQSYTLGF*EIFMTS Trigger: AGAAGTCATGAAGATTTCCCAGAATCCAAGGGTGTA...ACTTTGTAAAGATGTGTCTCTGTCCTTATTTGCCTGCCCAAAGCACCTTCTGAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043440.8 ENSMUST00000208974.2 |
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| 3UTR TCA 72 bp | GTAGAGCCAGGGCCCCCACCTCTTGGGCCGGTCATGTaGCTTCCTCCAGCCAATGGGATGGCAACGATGGTG | + |
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Preference number: 3 (lower is better) Translates to: VEPGPPPLGPVM*LPPANGMATMV Trigger: CACCATCGTTGCCATCCCATTGGCTGGAGGAAGTCACATGACCGGCCCAAGAGGTGGGGGCCCTGGCTCTAC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000043440.8 ENSMUST00000208974.2 |
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| 3UTR-3UTR CAA 90 bp | GGAAGAGGTAGAGCCAGGGCCCCCACCTCTTGGGCCGGTCATGTGACTTCCTCCTGTGAAGATGGGGTGTaGGCAGCCGGCAGGAAGATA | + |
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Preference number: 3 (lower is better) Translates to: GRGRARAPTSWAGHVTSSCEDGV*AAGRKI Trigger: TATCTTCCTGCCGGCTGCCAACACCCCATCTTCACA...GGAGGAAGTCACATGACCGGCCCAAGAGGTGGGGGCCCTGGCTCTACCTCTTCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000043440.8 ENSMUST00000208974.2 |
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| 3UTR CCA 72 bp | AGAGCAGGAAGAGGTAGAGCCAGGGCCCCCACCTCTTaGGCCGGTCATGTGACTTCCTCCAGCCAATGGGAT | + |
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Preference number: 3 (lower is better) Translates to: RAGRGRARAPTS*AGHVTSSSQWD Trigger: ATCCCATTGGCTGGAGGAAGTCACATGACCGGCCCAAGAGGTGGGGGCCCTGGCTCTACCTCTTCCTGCTCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000043440.8 ENSMUST00000208974.2 |
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| 3UTR GCA 72 bp | TGTTGCCCCTCCAGACAGTCACTGGACCACAGATACTaGAGCAAGCCCCCACCTGCCGAGCCTAACCTACAG | + |
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Preference number: 3 (lower is better) Translates to: CCPSRQSLDHRY*SKPPPAEPNLQ Trigger: CTGTAGGTTAGGCTCGGCAGGTGGGGGCTTGCTGCAGTATCTGTGGTCCAGTGACTGTCTGGAGGGGCAACA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000043440.8 ENSMUST00000208974.2 |
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| 3UTR CCA 72 bp | GCTGTTTCCACTGATGTTGCCCCTCCAGACAGTCACTaGACCACAGATACTGCAGCAAGCCCCCACCTGCCG | + |
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Preference number: 3 (lower is better) Translates to: AVSTDVAPPDSH*TTDTAASPHLP Trigger: CGGCAGGTGGGGGCTTGCTGCAGTATCTGTGGTCCAGTGACTGTCTGGAGGGGCAACATCAGTGGAAACAGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000043440.8 ENSMUST00000208974.2 |
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| 3UTR-3UTR CAA 90 bp | CTGTTTCCACTGATGTTGCCCCTCCAGACAGTCACTGGACCACAGATACTGCAGTGTGAAGATGGGGTGTaGGCAGCCGGCAGGAAGATA | + |
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Preference number: 3 (lower is better) Translates to: LFPLMLPLQTVTGPQILQCEDGV*AAGRKI Trigger: TATCTTCCTGCCGGCTGCCAACACCCCATCTTCACA...CTGCAGTATCTGTGGTCCAGTGACTGTCTGGAGGGGCAACATCAGTGGAAACAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043440.8 ENSMUST00000208974.2 |
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| 3UTR TCA 72 bp | CATAAGAGGACACCAAGGAATGCCAGCTGTTTCCACTaGTGTTGCCCCTCCAGACAGTCACTGGACCACAGA | + |
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Preference number: 3 (lower is better) Translates to: HKRTPRNASCFH*CCPSRQSLDHR Trigger: TCTGTGGTCCAGTGACTGTCTGGAGGGGCAACATCAGTGGAAACAGCTGGCATTCCTTGGTGTCCTCTTATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043440.8 ENSMUST00000208974.2 |
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| 3UTR-3UTR CAA 90 bp | TTGGCGTTTACCTTTCTGAACATAAGAGGACACCAAGGAATGCCAGCTGTTTCCAGGCAATTCGTTACCTaGCTGAGGCTGACAGATACA | + |
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Preference number: 3 (lower is better) Translates to: LAFTFLNIRGHQGMPAVSRQFVT*LRLTDT Trigger: TGTATCTGTCAGCCTCAGCAAGGTAACGAATTGCCT...GGAAACAGCTGGCATTCCTTGGTGTCCTCTTATGTTCAGAAAGGTAAACGCCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043440.8 ENSMUST00000208974.2 |
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| 3UTR CCA 72 bp | CTACAGCCGAAGCCACAGAATTGCAATCGGCACAAATaGCTGTTATTTCAAGCTGCTAGATTCCAGAGGCAA | + |
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Preference number: 3 (lower is better) Translates to: LQPKPQNCNRHK*LLFQAARFQRQ Trigger: TTGCCTCTGGAATCTAGCAGCTTGAAATAACAGCCATTTGTGCCGATTGCAATTCTGTGGCTTCGGCTGTAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043440.8 ENSMUST00000208974.2 |
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| CDS-3UTR CCA 90 bp | CAGGGCCCCCACCTCTTGGGCCGGTCATGTGACTTCCTCCAGCCAATGGGATGGCCGGGGACAGGCAGCTaGGTGTTGGCTCCTTTCATT | + |
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Preference number: 4 (lower is better) Translates to: QGPHLLGRSCDFLQPMGWPGTGS*VLAPFI Trigger: AATGAAAGGAGCCAACACCCAGCTGCCTGTCCCCGG...CCATCCCATTGGCTGGAGGAAGTCACATGACCGGCCCAAGAGGTGGGGGCCCTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000043440.8 |
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| CDS-3UTR CCA 90 bp | CAGGGCCCCCACCTCTTGGGCCGGTCATGTGACTTCCTCCAGCCAATGGGATGGCCAGTGGGATCAGGCTaGGATTGTCTTCAGCGTTCG | + |
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Preference number: 4 (lower is better) Translates to: QGPHLLGRSCDFLQPMGWPVGSG*DCLQRS Trigger: CGAACGCTGAAGACAATCCCAGCCTGATCCCACTGG...CCATCCCATTGGCTGGAGGAAGTCACATGACCGGCCCAAGAGGTGGGGGCCCTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000043440.8 ENSMUST00000208974.2 |
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| CDS-3UTR TCA 90 bp | TCTTGTTTGCAGTCCACGAGGCAGAAGAATAGAGACAGTGTTCCCGGAATAGGTGCCCTTGGGAGAGGATaGGGTTGGCGGCTGGGCTTC | + |
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Preference number: 4 (lower is better) Translates to: SCLQSTRQKNRDSVPGIGALGRG*GWRLGF Trigger: GAAGCCCAGCCGCCAACCTCATCCTCTCCCAAGGGC...ACCTATTCCGGGAACACTGTCTCTATTCTTCTGCCTCGTGGACTGCAAACAAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043440.8 ENSMUST00000208974.2 |
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| CDS-3UTR CCA 90 bp | GCTGTTTCCACTGATGTTGCCCCTCCAGACAGTCACTGGACCACAGATACTGCACAGGCTCTGGGTTCATaGTCACCATCCACTGCAGGA | + |
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Preference number: 4 (lower is better) Translates to: AVSTDVAPPDSHWTTDTAQALGS*SPSTAG Trigger: TCCTGCAGTGGATGGTGACCATGAACCCAGAGCCTG...TGCAGTATCTGTGGTCCAGTGACTGTCTGGAGGGGCAACATCAGTGGAAACAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043440.8 ENSMUST00000208974.2 |
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| CDS-3UTR GCA 90 bp | CTGTTTCCACTGATGTTGCCCCTCCAGACAGTCACTGGACCACAGATACTGCAGCTATGCACAGGTAAGTaGCCAGCTGATCTGGGGACA | + |
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Preference number: 4 (lower is better) Translates to: LFPLMLPLQTVTGPQILQLCTGK*PADLGT Trigger: TGTCCCCAGATCAGCTGGGCACTTACCTGTGCATAG...CTGCAGTATCTGTGGTCCAGTGACTGTCTGGAGGGGCAACATCAGTGGAAACAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043440.8 ENSMUST00000208974.2 |
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| CDS-3UTR TCA 90 bp | TGGATTCTGGGAAATCTTCATGACTTCTGTCAAATTCTTCCTCCTGTTCTCCCTGCCCTTGGGAGAGGATaGGGTTGGCGGCTGGGCTTC | + |
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Preference number: 4 (lower is better) Translates to: WILGNLHDFCQILPPVLPALGRG*GWRLGF Trigger: GAAGCCCAGCCGCCAACCTCATCCTCTCCCAAGGGC...AGGGAGAACAGGAGGAAGAATTTGACAGAAGTCATGAAGATTTCCCAGAATCCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043440.8 ENSMUST00000208974.2 |
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| CDS-3UTR GCA 90 bp | GCTGTTTCCACTGATGTTGCCCCTCCAGACAGTCACTGGACCACAGATACTGCAGGTCACTGTAGATTATaGCCTTGGAAGACTCGGGGA | + |
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Preference number: 4 (lower is better) Translates to: AVSTDVAPPDSHWTTDTAGHCRL*PWKTRG Trigger: TCCCCGAGTCTTCCAAGGGCATAATCTACAGTGACC...TGCAGTATCTGTGGTCCAGTGACTGTCTGGAGGGGCAACATCAGTGGAAACAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043440.8 ENSMUST00000208974.2 |
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| CDS-3UTR CCA 90 bp | TCTTGTTTGCAGTCCACGAGGCAGAAGAATAGAGACAGTGTTCCCGGAATAGGTGATGAGGTTGGCGGCTaGGCTTCAAGCTCTGGGAAC | + |
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Preference number: 4 (lower is better) Translates to: SCLQSTRQKNRDSVPGIGDEVGG*ASSSGN Trigger: GTTCCCAGAGCTTGAAGCCCAGCCGCCAACCTCATC...ACCTATTCCGGGAACACTGTCTCTATTCTTCTGCCTCGTGGACTGCAAACAAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043440.8 ENSMUST00000208974.2 |
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| CDS-3UTR CCA 90 bp | TCTTGTTTGCAGTCCACGAGGCAGAAGAATAGAGACAGTGTTCCCGGAATAGGTGGGGAAGGTCACCAGTaGGATCAGGCTGGGATTGTC | + |
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Preference number: 4 (lower is better) Translates to: SCLQSTRQKNRDSVPGIGGEGHQ*DQAGIV Trigger: GACAATCCCAGCCTGATCCCACTGGTGACCTTCCCC...ACCTATTCCGGGAACACTGTCTCTATTCTTCTGCCTCGTGGACTGCAAACAAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043440.8 ENSMUST00000208974.2 |
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| CDS-3UTR CCA 90 bp | TCTTGTTTGCAGTCCACGAGGCAGAAGAATAGAGACAGTGTTCCCGGAATAGGTTCATTTGGGGCAGCTTaGAGGTGGCTGAGCAGGTAC | + |
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Preference number: 4 (lower is better) Translates to: SCLQSTRQKNRDSVPGIGSFGAA*RWLSRY Trigger: GTACCTGCTCAGCCACCTCCAAGCTGCCCCAAATGA...ACCTATTCCGGGAACACTGTCTCTATTCTTCTGCCTCGTGGACTGCAAACAAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043440.8 |
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| CDS-3UTR CCA 90 bp | CGAAGCCACAGAATTGCAATCGGCACAAATGGCTGTTATTTCAAGCTGCTAGATGGGGAAGGTCACCAGTaGGATCAGGCTGGGATTGTC | + |
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Preference number: 4 (lower is better) Translates to: RSHRIAIGTNGCYFKLLDGEGHQ*DQAGIV Trigger: GACAATCCCAGCCTGATCCCACTGGTGACCTTCCCC...ATCTAGCAGCTTGAAATAACAGCCATTTGTGCCGATTGCAATTCTGTGGCTTCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043440.8 ENSMUST00000208974.2 |
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| CDS-3UTR CCA 90 bp | AATCGGTTGGCGTTTACCTTTCTGAACATAAGAGGACACCAAGGAATGCCAGCTGCTCAGCACAGGCTCTaGGTTCATGGTCACCATCCA | + |
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Preference number: 4 (lower is better) Translates to: NRLAFTFLNIRGHQGMPAAQHRL*VHGHHP Trigger: TGGATGGTGACCATGAACCCAGAGCCTGTGCTGAGC...AGCTGGCATTCCTTGGTGTCCTCTTATGTTCAGAAAGGTAAACGCCAACCGATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043440.8 ENSMUST00000208974.2 |
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| 3UTR CAA 72 bp | CCCCTCCCTTCAACTAAGCCAGGGAGTTTCTCTTGTTaGCAGTCCACGAGGCAGAAGAATAGAGACAGTGTT | + |
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Preference number: 4 (lower is better) Translates to: PLPSTKPGSFSC*QSTRQKNRDSV Trigger: AACACTGTCTCTATTCTTCTGCCTCGTGGACTGCAAACAAGAGAAACTCCCTGGCTTAGTTGAAGGGAGGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043440.8 ENSMUST00000208974.2 |
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| CDS-3UTR GCA 90 bp | TGGCTGTTATTTCAAGCTGCTAGATTCCAGAGGCAATTCGTTACCTTGCTGAGGCTGTGTTCCTGGCTATaGACAGGTAAGTGCCCAGCT | + |
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Preference number: 4 (lower is better) Translates to: WLLFQAARFQRQFVTLLRLCSWL*TGKCPA Trigger: AGCTGGGCACTTACCTGTGCATAGCCAGGAACACAG...CCTCAGCAAGGTAACGAATTGCCTCTGGAATCTAGCAGCTTGAAATAACAGCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043440.8 ENSMUST00000208974.2 |
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| CDS-3UTR CCA 90 bp | TGGCTGTTATTTCAAGCTGCTAGATTCCAGAGGCAATTCGTTACCTTGCTGAGGTTGGCTCCTTTCATTTaGGGCAGCTTGGAGGTGGCT | + |
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Preference number: 4 (lower is better) Translates to: WLLFQAARFQRQFVTLLRLAPFI*GSLEVA Trigger: AGCCACCTCCAAGCTGCCCCAAATGAAAGGAGCCAA...CCTCAGCAAGGTAACGAATTGCCTCTGGAATCTAGCAGCTTGAAATAACAGCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043440.8 |
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| 3UTR CAA 72 bp | TTTCAAGCTGCTAGATTCCAGAGGCAATTCGTTACCTaGCTGAGGCTGACAGATACACCCTTGGATTCTGGG | + |
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Preference number: 4 (lower is better) Translates to: FQAARFQRQFVT*LRLTDTPLDSG Trigger: CCCAGAATCCAAGGGTGTATCTGTCAGCCTCAGCAAGGTAACGAATTGCCTCTGGAATCTAGCAGCTTGAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043440.8 ENSMUST00000208974.2 |
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| CDS-3UTR GCA 90 bp | TGGCTGTTATTTCAAGCTGCTAGATTCCAGAGGCAATTCGTTACCTTGCTGAGGGGTCACTGTAGATTATaGCCTTGGAAGACTCGGGGA | + |
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Preference number: 4 (lower is better) Translates to: WLLFQAARFQRQFVTLLRGHCRL*PWKTRG Trigger: TCCCCGAGTCTTCCAAGGGCATAATCTACAGTGACC...CCTCAGCAAGGTAACGAATTGCCTCTGGAATCTAGCAGCTTGAAATAACAGCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043440.8 ENSMUST00000208974.2 |
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| CDS-3UTR GCA 90 bp | CGAAGCCACAGAATTGCAATCGGCACAAATGGCTGTTATTTCAAGCTGCTAGATCTATGCACAGGTAAGTaGCCAGCTGATCTGGGGACA | + |
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Preference number: 4 (lower is better) Translates to: RSHRIAIGTNGCYFKLLDLCTGK*PADLGT Trigger: TGTCCCCAGATCAGCTGGGCACTTACCTGTGCATAG...ATCTAGCAGCTTGAAATAACAGCCATTTGTGCCGATTGCAATTCTGTGGCTTCG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043440.8 ENSMUST00000208974.2 |
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| CDS-3UTR CCA 90 bp | ATCAGAAGGTGCTTTGGGCAGGCAAATAAGGACAGAGACACATCTTTACAAAGTCAGGCAGCTGGGTGTTaGCTCCTTTCATTTGGGGCA | + |
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Preference number: 4 (lower is better) Translates to: IRRCFGQANKDRDTSLQSQAAGC*LLSFGA Trigger: TGCCCCAAATGAAAGGAGCCAACACCCAGCTGCCTG...ACTTTGTAAAGATGTGTCTCTGTCCTTATTTGCCTGCCCAAAGCACCTTCTGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043440.8 |
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| CDS-3UTR CCA 90 bp | TGGATTCTGGGAAATCTTCATGACTTCTGTCAAATTCTTCCTCCTGTTCTCCCTCCAGTGGGATCAGGCTaGGATTGTCTTCAGCGTTCG | + |
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Preference number: 4 (lower is better) Translates to: WILGNLHDFCQILPPVLPPVGSG*DCLQRS Trigger: CGAACGCTGAAGACAATCCCAGCCTGATCCCACTGG...AGGGAGAACAGGAGGAAGAATTTGACAGAAGTCATGAAGATTTCCCAGAATCCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043440.8 ENSMUST00000208974.2 |
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| CDS-3UTR CCA 90 bp | TGGATTCTGGGAAATCTTCATGACTTCTGTCAAATTCTTCCTCCTGTTCTCCCTCAGGCTCTGGGTTCATaGTCACCATCCACTGCAGGA | + |
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Preference number: 4 (lower is better) Translates to: WILGNLHDFCQILPPVLPQALGS*SPSTAG Trigger: TCCTGCAGTGGATGGTGACCATGAACCCAGAGCCTG...AGGGAGAACAGGAGGAAGAATTTGACAGAAGTCATGAAGATTTCCCAGAATCCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043440.8 ENSMUST00000208974.2 |
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| CDS-3UTR CCA 90 bp | ATCAGAAGGTGCTTTGGGCAGGCAAATAAGGACAGAGACACATCTTTACAAAGTGCTCAGCACAGGCTCTaGGTTCATGGTCACCATCCA | + |
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Preference number: 4 (lower is better) Translates to: IRRCFGQANKDRDTSLQSAQHRL*VHGHHP Trigger: TGGATGGTGACCATGAACCCAGAGCCTGTGCTGAGC...ACTTTGTAAAGATGTGTCTCTGTCCTTATTTGCCTGCCCAAAGCACCTTCTGAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043440.8 ENSMUST00000208974.2 |
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| CDS TCA 90 bp | CTCTTGGCTAGTGCGAGGACGTCCTGGGAGGCCCTTGGGAGAGGATaGGGTTGGCGGCTGGGCTTCAAGCTCTGGGAACCAAGAAGTGCT | + |
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Preference number: 5 (lower is better) Translates to: LLASARTSWEALGRG*GWRLGFKLWEPRSA Trigger: AGCACTTCTTGGTTCCCAGAGCTTGAAGCCCAGCCGCCAACCTCATCCTCTCCCAAGGGCCTCCCAGGACGTCCTCGCACTAGCCAAGAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043440.8 ENSMUST00000208974.2 |
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| CDS CCA 90 bp | CGGGGACAGGCAGCTGGGTGTTGGCTCCTTTCATTTGGGGCAGCTTaGAGGTGGCTGAGCAGGTACAGGAGGAGAGCAGGGCACCTGTTA | + |
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Preference number: 5 (lower is better) Translates to: RGQAAGCWLLSFGAA*RWLSRYRRRAGHLL Trigger: TAACAGGTGCCCTGCTCTCCTCCTGTACCTGCTCAGCCACCTCCAAGCTGCCCCAAATGAAAGGAGCCAACACCCAGCTGCCTGTCCCCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043440.8 |
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| CDS CCA 90 bp | TCAAGAGCTCCGGGGACAGGCAGCTGGGTGTTGGCTCCTTTCATTTaGGGCAGCTTGGAGGTGGCTGAGCAGGTACAGGAGGAGAGCAGG | + |
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Preference number: 5 (lower is better) Translates to: SRAPGTGSWVLAPFI*GSLEVAEQVQEESR Trigger: CCTGCTCTCCTCCTGTACCTGCTCAGCCACCTCCAAGCTGCCCCAAATGAAAGGAGCCAACACCCAGCTGCCTGTCCCCGGAGCTCTTGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043440.8 |
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| CDS CCA 90 bp | ACCAGTGGGATCAGGCTGGGATTGTCTTCAGCGTTCGGCACCTCTTaGCTAGTGCGAGGACGTCCTGGGAGGCCCTTGGGAGAGGATGAG | + |
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Preference number: 5 (lower is better) Translates to: TSGIRLGLSSAFGTS*LVRGRPGRPLGEDE Trigger: CTCATCCTCTCCCAAGGGCCTCCCAGGACGTCCTCGCACTAGCCAAGAGGTGCCGAACGCTGAAGACAATCCCAGCCTGATCCCACTGGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043440.8 ENSMUST00000208974.2 |
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| CDS TCA 90 bp | AACTGTGGGAGCCGGAACTGTGGGAGCCCCGGTGGCTGGGCTCAATaGGACAGTCACCGGCTCAGAGACCAGCTCTTTGTCTGTGTTCCT | + |
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Preference number: 5 (lower is better) Translates to: NCGSRNCGSPGGWAQ*DSHRLRDQLFVCVP Trigger: AGGAACACAGACAAAGAGCTGGTCTCTGAGCCGGTGACTGTCTCATTGAGCCCAGCCACCGGGGCTCCCACAGTTCCGGCTCCCACAGTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043440.8 ENSMUST00000208974.2 |
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| CDS TCA 90 bp | ATGAGGTTGGCGGCTGGGCTTCAAGCTCTGGGAACCAAGAAGTGCTaGGATCTTTCTCAAGAGCTCCGGGGACAGGCAGCTGGGTGTTGG | + |
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Preference number: 5 (lower is better) Translates to: MRLAAGLQALGTKKC*DLSQELRGQAAGCW Trigger: CCAACACCCAGCTGCCTGTCCCCGGAGCTCTTGAGAAAGATCTCAGCACTTCTTGGTTCCCAGAGCTTGAAGCCCAGCCGCCAACCTCAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043440.8 ENSMUST00000208974.2 |
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| CDS CCA 90 bp | CAAGAAGTGCTGAGATCTTTCTCAAGAGCTCCGGGGACAGGCAGCTaGGTGTTGGCTCCTTTCATTTGGGGCAGCTTGGAGGTGGCTGAG | + |
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Preference number: 5 (lower is better) Translates to: QEVLRSFSRAPGTGS*VLAPFIWGSLEVAE Trigger: CTCAGCCACCTCCAAGCTGCCCCAAATGAAAGGAGCCAACACCCAGCTGCCTGTCCCCGGAGCTCTTGAGAAAGATCTCAGCACTTCTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043440.8 |
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| CDS CCA 90 bp | AGTTCCACATGGCTTTCCATCAAAGGTCCAGCTCAGCACAGGCTCTaGGTTCATGGTCACCATCCACTGCAGGATCACAGAGTAGTTAAG | + |
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Preference number: 5 (lower is better) Translates to: SSTWLSIKGPAQHRL*VHGHHPLQDHRVVK Trigger: CTTAACTACTCTGTGATCCTGCAGTGGATGGTGACCATGAACCCAGAGCCTGTGCTGAGCTGGACCTTTGATGGAAAGCCATGTGGAACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043440.8 ENSMUST00000208974.2 |
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| CDS TCA 72 bp | AGTGCGAGGACGTCCTGGGAGGCCCTTGGGAGAGGATaGGGTTGGCGGCTGGGCTTCAAGCTCTGGGAACCA | + |
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Preference number: 6 (lower is better) Translates to: SARTSWEALGRG*GWRLGFKLWEP Trigger: TGGTTCCCAGAGCTTGAAGCCCAGCCGCCAACCTCATCCTCTCCCAAGGGCCTCCCAGGACGTCCTCGCACT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043440.8 ENSMUST00000208974.2 |
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| CDS TCA 72 bp | AGCCGGAACTGTGGGAGCCCCGGTGGCTGGGCTCAATaGGACAGTCACCGGCTCAGAGACCAGCTCTTTGTC | + |
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Preference number: 6 (lower is better) Translates to: SRNCGSPGGWAQ*DSHRLRDQLFV Trigger: GACAAAGAGCTGGTCTCTGAGCCGGTGACTGTCTCATTGAGCCCAGCCACCGGGGCTCCCACAGTTCCGGCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043440.8 ENSMUST00000208974.2 |
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| CDS CCA 72 bp | CCGGGGACAGGCAGCTGGGTGTTGGCTCCTTTCATTTaGGGCAGCTTGGAGGTGGCTGAGCAGGTACAGGAG | + |
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Preference number: 6 (lower is better) Translates to: PGTGSWVLAPFI*GSLEVAEQVQE Trigger: CTCCTGTACCTGCTCAGCCACCTCCAAGCTGCCCCAAATGAAAGGAGCCAACACCCAGCTGCCTGTCCCCGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043440.8 |
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| CDS CAA 72 bp | GATCAGGCTGGGATTGTCTTCAGCGTTCGGCACCTCTaGGCTAGTGCGAGGACGTCCTGGGAGGCCCTTGGG | + |
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Preference number: 6 (lower is better) Translates to: DQAGIVFSVRHL*ASARTSWEALG Trigger: CCCAAGGGCCTCCCAGGACGTCCTCGCACTAGCCAAGAGGTGCCGAACGCTGAAGACAATCCCAGCCTGATC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043440.8 ENSMUST00000208974.2 |
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| CDS CCA 72 bp | GCAGCTGGGTGTTGGCTCCTTTCATTTGGGGCAGCTTaGAGGTGGCTGAGCAGGTACAGGAGGAGAGCAGGG | + |
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Preference number: 6 (lower is better) Translates to: AAGCWLLSFGAA*RWLSRYRRRAG Trigger: CCCTGCTCTCCTCCTGTACCTGCTCAGCCACCTCCAAGCTGCCCCAAATGAAAGGAGCCAACACCCAGCTGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043440.8 |
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| CDS CCA 72 bp | ATCAGGCTGGGATTGTCTTCAGCGTTCGGCACCTCTTaGCTAGTGCGAGGACGTCCTGGGAGGCCCTTGGGA | + |
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Preference number: 6 (lower is better) Translates to: IRLGLSSAFGTS*LVRGRPGRPLG Trigger: TCCCAAGGGCCTCCCAGGACGTCCTCGCACTAGCCAAGAGGTGCCGAACGCTGAAGACAATCCCAGCCTGAT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043440.8 ENSMUST00000208974.2 |
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| CDS CCA 72 bp | CTTTCTCAAGAGCTCCGGGGACAGGCAGCTGGGTGTTaGCTCCTTTCATTTGGGGCAGCTTGGAGGTGGCTG | + |
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Preference number: 6 (lower is better) Translates to: LSQELRGQAAGC*LLSFGAAWRWL Trigger: CAGCCACCTCCAAGCTGCCCCAAATGAAAGGAGCCAACACCCAGCTGCCTGTCCCCGGAGCTCTTGAGAAAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043440.8 |
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| CDS CAA 90 bp | GTGCTGAGATCTTTCTCAAGAGCTCCGGGGACAGGCAGCTGGGTGTaGGCTCCTTTCATTTGGGGCAGCTTGGAGGTGGCTGAGCAGGTA | + |
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Preference number: 6 (lower is better) Translates to: VLRSFSRAPGTGSWV*APFIWGSLEVAEQV Trigger: TACCTGCTCAGCCACCTCCAAGCTGCCCCAAATGAAAGGAGCCAACACCCAGCTGCCTGTCCCCGGAGCTCTTGAGAAAGATCTCAGCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043440.8 |
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| CDS TCA 72 bp | GCGGCTGGGCTTCAAGCTCTGGGAACCAAGAAGTGCTaGGATCTTTCTCAAGAGCTCCGGGGACAGGCAGCT | + |
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Preference number: 6 (lower is better) Translates to: AAGLQALGTKKC*DLSQELRGQAA Trigger: AGCTGCCTGTCCCCGGAGCTCTTGAGAAAGATCTCAGCACTTCTTGGTTCCCAGAGCTTGAAGCCCAGCCGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043440.8 ENSMUST00000208974.2 |
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| CDS CAA 72 bp | TCTTTCTCAAGAGCTCCGGGGACAGGCAGCTGGGTGTaGGCTCCTTTCATTTGGGGCAGCTTGGAGGTGGCT | + |
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Preference number: 6 (lower is better) Translates to: SFSRAPGTGSWV*APFIWGSLEVA Trigger: AGCCACCTCCAAGCTGCCCCAAATGAAAGGAGCCAACACCCAGCTGCCTGTCCCCGGAGCTCTTGAGAAAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043440.8 |
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| CDS CCA 72 bp | CTGAGATCTTTCTCAAGAGCTCCGGGGACAGGCAGCTaGGTGTTGGCTCCTTTCATTTGGGGCAGCTTGGAG | + |
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Preference number: 6 (lower is better) Translates to: LRSFSRAPGTGS*VLAPFIWGSLE Trigger: CTCCAAGCTGCCCCAAATGAAAGGAGCCAACACCCAGCTGCCTGTCCCCGGAGCTCTTGAGAAAGATCTCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043440.8 |
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| CDS CCA 72 bp | ATCCTCCTGAGACCGACATGTAGTCGTTCGGCTTCATaGGATAGGCAACTGTGGGAGCCGGAACTGTGGGAG | + |
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Preference number: 6 (lower is better) Translates to: ILLRPTCSRSAS*DRQLWEPELWE Trigger: CTCCCACAGTTCCGGCTCCCACAGTTGCCTATCCCATGAAGCCGAACGACTACATGTCGGTCTCAGGAGGAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043440.8 ENSMUST00000208974.2 |
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| CDS CCA 72 bp | TGGCTTTCCATCAAAGGTCCAGCTCAGCACAGGCTCTaGGTTCATGGTCACCATCCACTGCAGGATCACAGA | + |
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Preference number: 6 (lower is better) Translates to: WLSIKGPAQHRL*VHGHHPLQDHR Trigger: TCTGTGATCCTGCAGTGGATGGTGACCATGAACCCAGAGCCTGTGCTGAGCTGGACCTTTGATGGAAAGCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043440.8 ENSMUST00000208974.2 |
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