Pregenerated sensors for IGSF21 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000040972Ensembl transcript IDs: ENSMUST00000039331.9
Found 105 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CCA 90 bp | GTTTGTTTAATTAAACCCAGTGAGGAAGCCAAGACATGGGCCGAGACTAAGAACGAGATGCCGGGCGGCTaGAGCATCGGGAGGAGGCAG | + |
|
Preference number: 2 (lower is better) Translates to: VCLIKPSEEAKTWAETKNEMPGG*SIGRRQ Trigger: CTGCCTCCTCCCGATGCTCCAGCCGCCCGGCATCTC...GTTCTTAGTCTCGGCCCATGTCTTGGCTTCCTCACTGGGTTTAATTAAACAAAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039331.9 |
||
| CDS-3UTR CCA 90 bp | AGAAATGAAAATCGATCGCAGAGATGCCGGGCGGCTGGAGCATCGGGAGGAGGCGCTGCACGAAGAGGCTaGGGTCCTGGGTCAGGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: RNENRSQRCRAAGASGGGAARRG*GPGSGC Trigger: GCAGCCTGACCCAGGACCCCAGCCTCTTCGTGCAGC...GCCTCCTCCCGATGCTCCAGCCGCCCGGCATCTCTGCGATCGATTTTCATTTCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039331.9 |
||
| CDS-3UTR CCA 90 bp | AGAAATGAAAATCGATCGCAGAGATGCCGGGCGGCTGGAGCATCGGGAGGAGGCGTGAAGTTCTGGGCCTaGTACCGGCTAAAGGGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: RNENRSQRCRAAGASGGGVKFWA*YRLKGA Trigger: TGCCCCCTTTAGCCGGTACCAGGCCCAGAACTTCAC...GCCTCCTCCCGATGCTCCAGCCGCCCGGCATCTCTGCGATCGATTTTCATTTCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039331.9 |
||
| CDS-3UTR GCA 90 bp | ATTAAACCCAGTGAGGAAGCCAAGACATGGGCCGAGACTAAGAACAAGACTGGACCACCGTGCCATCGCTaGCTGGGGTGCGGCTGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: IKPSEEAKTWAETKNKTGPPCHR*LGCGCG Trigger: GCCACAGCCGCACCCCAGGCAGCGATGGCACGGTGG...TCCAGTCTTGTTCTTAGTCTCGGCCCATGTCTTGGCTTCCTCACTGGGTTTAAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039331.9 |
||
| CDS-3UTR CCA 90 bp | AACCCAGTGAGGAAGCCAAGACATGGGCCGAGACTAAGAACAAGACTGGAAATACGTGCCATCGCTGCCTaGGGTGCGGCTGTGGCGCAG | + |
|
Preference number: 4 (lower is better) Translates to: NPVRKPRHGPRLRTRLEIRAIAA*GAAVAQ Trigger: CTGCGCCACAGCCGCACCCCAGGCAGCGATGGCACG...TATTTCCAGTCTTGTTCTTAGTCTCGGCCCATGTCTTGGCTTCCTCACTGGGTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039331.9 |
||
| CDS-3UTR GCA 90 bp | AGAAATGAAAATCGATCGCAGAGATGCCGGGCGGCTGGAGCATCGGGAGGAGGCCAAGGTCCTCCCTCTTaGGGTAATTCTCCATGTGCG | + |
|
Preference number: 4 (lower is better) Translates to: RNENRSQRCRAAGASGGGQGPPS*GNSPCA Trigger: CGCACATGGAGAATTACCGCAAGAGGGAGGACCTTG...GCCTCCTCCCGATGCTCCAGCCGCCCGGCATCTCTGCGATCGATTTTCATTTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039331.9 |
||
| CDS-3UTR TCA 90 bp | AACCCAGTGAGGAAGCCAAGACATGGGCCGAGACTAAGAACAAGACTGGAAATATGGGAGCAACCAGCGTaGCCTCCGCCTGCATGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: NPVRKPRHGPRLRTRLEIWEQPA*PPPAWA Trigger: TGCCCATGCAGGCGGAGGTCACGCTGGTTGCTCCCA...TATTTCCAGTCTTGTTCTTAGTCTCGGCCCATGTCTTGGCTTCCTCACTGGGTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039331.9 |
||
| CDS-3UTR CCA 90 bp | TGTTTAATTAAACCCAGTGAGGAAGCCAAGACATGGGCCGAGACTAAGAACAAGAAGAGGCTGGGGTCCTaGGTCAGGCTGCGCGCGGGG | + |
|
Preference number: 4 (lower is better) Translates to: CLIKPSEEAKTWAETKNKKRLGS*VRLRAG Trigger: CCCCGCGCGCAGCCTGACCCAGGACCCCAGCCTCTT...CTTGTTCTTAGTCTCGGCCCATGTCTTGGCTTCCTCACTGGGTTTAATTAAACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039331.9 |
||
| CDS-3UTR TCA 90 bp | ATTAAACCCAGTGAGGAAGCCAAGACATGGGCCGAGACTAAGAACAAGACTGGACGCCGGCTTCCCTCCTaGCACGATGCAGACCAGTGT | + |
|
Preference number: 4 (lower is better) Translates to: IKPSEEAKTWAETKNKTGRRLPS*HDADQC Trigger: ACACTGGTCTGCATCGTGTCAGGAGGGAAGCCGGCG...TCCAGTCTTGTTCTTAGTCTCGGCCCATGTCTTGGCTTCCTCACTGGGTTTAAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039331.9 |
||
| CDS-3UTR TCA 90 bp | AAACCCAGTGAGGAAGCCAAGACATGGGCCGAGACTAAGAACAAGACTGGAAATGGTACATGGAGCCGTTaGGCTCGGCAGGAACCCGCT | + |
|
Preference number: 4 (lower is better) Translates to: KPSEEAKTWAETKNKTGNGTWSR*ARQEPA Trigger: AGCGGGTTCCTGCCGAGCTCAACGGCTCCATGTACC...ATTTCCAGTCTTGTTCTTAGTCTCGGCCCATGTCTTGGCTTCCTCACTGGGTTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039331.9 |
||
| CDS-3UTR GCA 90 bp | AGAAATGAAAATCGATCGCAGAGATGCCGGGCGGCTGGAGCATCGGGAGGAGGCAACGTGAAGATCTTCTaGTTGATGGTGCCGCCATCT | + |
|
Preference number: 4 (lower is better) Translates to: RNENRSQRCRAAGASGGGNVKIF*LMVPPS Trigger: AGATGGCGGCACCATCAAGCAGAAGATCTTCACGTT...GCCTCCTCCCGATGCTCCAGCCGCCCGGCATCTCTGCGATCGATTTTCATTTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039331.9 |
||
| CDS-3UTR GCA 90 bp | ATTAAACCCAGTGAGGAAGCCAAGACATGGGCCGAGACTAAGAACAAGACTGGAAGCGTGACCTCCGCCTaGATGGGCATGGACAGCGCT | + |
|
Preference number: 4 (lower is better) Translates to: IKPSEEAKTWAETKNKTGSVTSA*MGMDSA Trigger: AGCGCTGTCCATGCCCATGCAGGCGGAGGTCACGCT...TCCAGTCTTGTTCTTAGTCTCGGCCCATGTCTTGGCTTCCTCACTGGGTTTAAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039331.9 |
||
| CDS-3UTR GCA 90 bp | AAACCCAGTGAGGAAGCCAAGACATGGGCCGAGACTAAGAACAAGACTGGAAATCGTCAAACTCGGCACTaGCATCCAGGAGGCGGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: KPSEEAKTWAETKNKTGNRQTRH*HPGGGC Trigger: GCAGCCGCCTCCTGGATGGCAGTGCCGAGTTTGACG...ATTTCCAGTCTTGTTCTTAGTCTCGGCCCATGTCTTGGCTTCCTCACTGGGTTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039331.9 |
||
| CDS-3UTR GCA 90 bp | AAACCCAGTGAGGAAGCCAAGACATGGGCCGAGACTAAGAACAAGACTGGAAATGGGGGTTCTGGGCAGTaGAGCGGTACATGGAGCCGT | + |
|
Preference number: 4 (lower is better) Translates to: KPSEEAKTWAETKNKTGNGGSGQ*SGTWSR Trigger: ACGGCTCCATGTACCGCTGCACTGCCCAGAACCCCC...ATTTCCAGTCTTGTTCTTAGTCTCGGCCCATGTCTTGGCTTCCTCACTGGGTTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000039331.9 |
||
| CDS-3UTR GCA 90 bp | AACCCAGTGAGGAAGCCAAGACATGGGCCGAGACTAAGAACAAGACTGGAAATAACACTTCAGGGTCACTaGGTCCCCAGCCACCACAGG | + |
|
Preference number: 4 (lower is better) Translates to: NPVRKPRHGPRLRTRLEITLQGH*VPSHHR Trigger: CCTGTGGTGGCTGGGGACGCAGTGACCCTGAAGTGT...TATTTCCAGTCTTGTTCTTAGTCTCGGCCCATGTCTTGGCTTCCTCACTGGGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039331.9 |
||
| CDS-3UTR GCA 90 bp | TGTTTAATTAAACCCAGTGAGGAAGCCAAGACATGGGCCGAGACTAAGAACAAGGGCTTCGGAAGGGCCTaGTGTCCTGGACTGGGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: CLIKPSEEAKTWAETKNKGFGRA*CPGLGQ Trigger: CTGGCCCAGTCCAGGACAGCAGGCCCTTCCGAAGCC...CTTGTTCTTAGTCTCGGCCCATGTCTTGGCTTCCTCACTGGGTTTAATTAAACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039331.9 |
||
| CDS-3UTR GCA 90 bp | AAACCCAGTGAGGAAGCCAAGACATGGGCCGAGACTAAGAACAAGACTGGAAATTTTTCCGTGGTGGGCTaGACGAAGAGGCTGGGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: KPSEEAKTWAETKNKTGNFSVVG*TKRLGS Trigger: GGACCCCAGCCTCTTCGTGCAGCCCACCACGGAAAA...ATTTCCAGTCTTGTTCTTAGTCTCGGCCCATGTCTTGGCTTCCTCACTGGGTTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039331.9 |
||
| CDS-3UTR GCA 90 bp | GTTTGTTTAATTAAACCCAGTGAGGAAGCCAAGACATGGGCCGAGACTAAGAACCATCGCTGCCTGGGGTaGGGCTGTGGCGCAGGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: VCLIKPSEEAKTWAETKNHRCLG*GCGAGS Trigger: ACTTCCTGCGCCACAGCCGCACCCCAGGCAGCGATG...GTTCTTAGTCTCGGCCCATGTCTTGGCTTCCTCACTGGGTTTAATTAAACAAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039331.9 |
||
| CDS-3UTR CCA 90 bp | AAACCCAGTGAGGAAGCCAAGACATGGGCCGAGACTAAGAACAAGACTGGAAATGGACTGGGCCAGAGCTaGCTGCTGGCAGTTCTGTCA | + |
|
Preference number: 4 (lower is better) Translates to: KPSEEAKTWAETKNKTGNGLGQS*LLAVLS Trigger: TGACAGAACTGCCAGCAGCCAGCTCTGGCCCAGTCC...ATTTCCAGTCTTGTTCTTAGTCTCGGCCCATGTCTTGGCTTCCTCACTGGGTTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039331.9 |
||
| CDS-3UTR CCA 90 bp | AAACCCAGTGAGGAAGCCAAGACATGGGCCGAGACTAAGAACAAGACTGGAAATGGGCATGGACAGCGCTaGGTGCTTGACCTCACAGCT | + |
|
Preference number: 4 (lower is better) Translates to: KPSEEAKTWAETKNKTGNGHGQR*VLDLTA Trigger: AGCTGTGAGGTCAAGCACCCAGCGCTGTCCATGCCC...ATTTCCAGTCTTGTTCTTAGTCTCGGCCCATGTCTTGGCTTCCTCACTGGGTTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039331.9 |
||
| CDS-3UTR TCA 90 bp | ATTAAACCCAGTGAGGAAGCCAAGACATGGGCCGAGACTAAGAACAAGACTGGAATAGGGACCATTGTCTaGGATCCGGACCTCGGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: IKPSEEAKTWAETKNKTGIGTIV*DPDLGQ Trigger: CTGCCCGAGGTCCGGATCTCAGACAATGGTCCCTAT...TCCAGTCTTGTTCTTAGTCTCGGCCCATGTCTTGGCTTCCTCACTGGGTTTAAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039331.9 |
||
| CDS-3UTR TCA 90 bp | ATTAAACCCAGTGAGGAAGCCAAGACATGGGCCGAGACTAAGAACAAGACTGGACGATGCAGACCAGTGTaGAGTTCTGGGCCTGGTACC | + |
|
Preference number: 4 (lower is better) Translates to: IKPSEEAKTWAETKNKTGRCRPV*SSGPGT Trigger: GGTACCAGGCCCAGAACTTCACACTGGTCTGCATCG...TCCAGTCTTGTTCTTAGTCTCGGCCCATGTCTTGGCTTCCTCACTGGGTTTAAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039331.9 |
||
| CDS-3UTR GCA 90 bp | GTTTGTTTAATTAAACCCAGTGAGGAAGCCAAGACATGGGCCGAGACTAAGAACTGGGCCAGAGCTGGCTaGTGGCAGTTCTGTCAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: VCLIKPSEEAKTWAETKNWARAG*WQFCQG Trigger: CCCCTGACAGAACTGCCAGCAGCCAGCTCTGGCCCA...GTTCTTAGTCTCGGCCCATGTCTTGGCTTCCTCACTGGGTTTAATTAAACAAAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039331.9 |
||
| CDS-3UTR CCA 90 bp | GTTTGTTTAATTAAACCCAGTGAGGAAGCCAAGACATGGGCCGAGACTAAGAACGCCAGAGCTGGCTGCTaGCAGTTCTGTCAGGGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: VCLIKPSEEAKTWAETKNARAGC*QFCQGH Trigger: GTGCCCCTGACAGAACTGCCAGCAGCCAGCTCTGGC...GTTCTTAGTCTCGGCCCATGTCTTGGCTTCCTCACTGGGTTTAATTAAACAAAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039331.9 |
||
| CDS-3UTR CCA 90 bp | AAACCCAGTGAGGAAGCCAAGACATGGGCCGAGACTAAGAACAAGACTGGAAATGGATGTTTTCCGTGGTaGGCTGCACGAAGAGGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: KPSEEAKTWAETKNKTGNGCFPW*AARRGW Trigger: CCAGCCTCTTCGTGCAGCCCACCACGGAAAACATCC...ATTTCCAGTCTTGTTCTTAGTCTCGGCCCATGTCTTGGCTTCCTCACTGGGTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039331.9 |
||
| CDS-3UTR TCA 90 bp | GTTTGTTTAATTAAACCCAGTGAGGAAGCCAAGACATGGGCCGAGACTAAGAACGAAGGGGCTCAATGTTaGCTGTCAGGTAGCCGCGTG | + |
|
Preference number: 4 (lower is better) Translates to: VCLIKPSEEAKTWAETKNEGAQC*LSGSRV Trigger: CACGCGGCTACCTGACAGTCAACATTGAGCCCCTTC...GTTCTTAGTCTCGGCCCATGTCTTGGCTTCCTCACTGGGTTTAATTAAACAAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039331.9 |
||
| CDS-3UTR TCA 90 bp | TGTTTAATTAAACCCAGTGAGGAAGCCAAGACATGGGCCGAGACTAAGAACAAGGAGGAAGATGTTGCCTaGGGCGAGGACCACCTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: CLIKPSEEAKTWAETKNKEEDVA*GEDHLL Trigger: GAGAAGGTGGTCCTCGCCTCAGGCAACATCTTCCTC...CTTGTTCTTAGTCTCGGCCCATGTCTTGGCTTCCTCACTGGGTTTAATTAAACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039331.9 |
||
| CDS-3UTR GCA 90 bp | TGTTTAATTAAACCCAGTGAGGAAGCCAAGACATGGGCCGAGACTAAGAACAAGGCCTCATTGTCGATCTaGGGGTTGAGGGTCCAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: CLIKPSEEAKTWAETKNKASLSI*GLRVQV Trigger: CACCTGGACCCTCAACCCGCAGATCGACAATGAGGC...CTTGTTCTTAGTCTCGGCCCATGTCTTGGCTTCCTCACTGGGTTTAATTAAACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039331.9 |
||
| CDS-3UTR CCA 90 bp | TGTTTAATTAAACCCAGTGAGGAAGCCAAGACATGGGCCGAGACTAAGAACAAGCCACCTTCTCCCTCGTaGCTCGGTCGTAGATACCCA | + |
|
Preference number: 4 (lower is better) Translates to: CLIKPSEEAKTWAETKNKPPSPS*LGRRYP Trigger: TGGGTATCTACGACCGAGCCACGAGGGAGAAGGTGG...CTTGTTCTTAGTCTCGGCCCATGTCTTGGCTTCCTCACTGGGTTTAATTAAACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039331.9 |
||
| CDS-3UTR CCA 90 bp | AACCCAGTGAGGAAGCCAAGACATGGGCCGAGACTAAGAACAAGACTGGAAATAACCAGTGTGAAGTTCTaGGCCTGGTACCGGCTAAAG | + |
|
Preference number: 4 (lower is better) Translates to: NPVRKPRHGPRLRTRLEITSVKF*AWYRLK Trigger: CTTTAGCCGGTACCAGGCCCAGAACTTCACACTGGT...TATTTCCAGTCTTGTTCTTAGTCTCGGCCCATGTCTTGGCTTCCTCACTGGGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039331.9 |
||
| CDS-3UTR TCA 90 bp | AACCCAGTGAGGAAGCCAAGACATGGGCCGAGACTAAGAACAAGACTGGAAATATACGGCCGTCTGTCTTaGAGTTACACTTCAGGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: NPVRKPRHGPRLRTRLEIYGRLS*SYTSGS Trigger: TGACCCTGAAGTGTAACTTCAAGACAGACGGCCGTA...TATTTCCAGTCTTGTTCTTAGTCTCGGCCCATGTCTTGGCTTCCTCACTGGGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039331.9 |
||
| CDS-3UTR TCA 90 bp | AAACCCAGTGAGGAAGCCAAGACATGGGCCGAGACTAAGAACAAGACTGGAAATGGGAAGACCTCATTCTaGAATCCGTGGACTAGGATC | + |
|
Preference number: 4 (lower is better) Translates to: KPSEEAKTWAETKNKTGNGKTSF*NPWTRI Trigger: GATCCTAGTCCACGGATTTCAGAATGAGGTCTTCCC...ATTTCCAGTCTTGTTCTTAGTCTCGGCCCATGTCTTGGCTTCCTCACTGGGTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039331.9 |
||
| CDS-3UTR CCA 90 bp | AACCCAGTGAGGAAGCCAAGACATGGGCCGAGACTAAGAACAAGACTGGAAATATGTGCGAGTAGTTCGTaGAGAACATGGCGTCAAACG | + |
|
Preference number: 4 (lower is better) Translates to: NPVRKPRHGPRLRTRLEICASSS*RTWRQT Trigger: CGTTTGACGCCATGTTCTCCACGAACTACTCGCACA...TATTTCCAGTCTTGTTCTTAGTCTCGGCCCATGTCTTGGCTTCCTCACTGGGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039331.9 |
||
| CDS-3UTR CCA 90 bp | GTTTGTTTAATTAAACCCAGTGAGGAAGCCAAGACATGGGCCGAGACTAAGAACGCTCACCACTGTCTCTaGGATGTTTTCCGTGGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: VCLIKPSEEAKTWAETKNAHHCL*DVFRGG Trigger: CCCACCACGGAAAACATCCCAGAGACAGTGGTGAGC...GTTCTTAGTCTCGGCCCATGTCTTGGCTTCCTCACTGGGTTTAATTAAACAAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039331.9 |
||
| CDS-3UTR TCA 90 bp | GTTTGTTTAATTAAACCCAGTGAGGAAGCCAAGACATGGGCCGAGACTAAGAACTGCTGGGCGTCATCATaGTTTTGGGTCCTTTGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: VCLIKPSEEAKTWAETKNCWASS*FWVLWE Trigger: CTCCCAAAGGACCCAAAATCATGATGACGCCCAGCA...GTTCTTAGTCTCGGCCCATGTCTTGGCTTCCTCACTGGGTTTAATTAAACAAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039331.9 |
||
| CDS-3UTR CCA 90 bp | ATTAAACCCAGTGAGGAAGCCAAGACATGGGCCGAGACTAAGAACAAGACTGGACGTGAACATGGGTTCTaGGAAGACCTCATTCTGAAA | + |
|
Preference number: 4 (lower is better) Translates to: IKPSEEAKTWAETKNKTGREHGF*EDLILK Trigger: TTTCAGAATGAGGTCTTCCCAGAACCCATGTTCACG...TCCAGTCTTGTTCTTAGTCTCGGCCCATGTCTTGGCTTCCTCACTGGGTTTAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039331.9 |
||
| CDS-3UTR CCA 90 bp | ATTAAACCCAGTGAGGAAGCCAAGACATGGGCCGAGACTAAGAACAAGACTGGATCCTCTTGGGATATTTaGGTTTTCGAACACGATGAG | + |
|
Preference number: 4 (lower is better) Translates to: IKPSEEAKTWAETKNKTGSSWDI*VFEHDE Trigger: CTCATCGTGTTCGAAAACCCAAATATCCCAAGAGGA...TCCAGTCTTGTTCTTAGTCTCGGCCCATGTCTTGGCTTCCTCACTGGGTTTAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039331.9 |
||
| CDS-3UTR CCA 90 bp | AACCCAGTGAGGAAGCCAAGACATGGGCCGAGACTAAGAACAAGACTGGAAATAGTCCTCTGTTCCTCTTaGGATATTTGGGTTTTCGAA | + |
|
Preference number: 4 (lower is better) Translates to: NPVRKPRHGPRLRTRLEIVLCSS*DIWVFE Trigger: TTCGAAAACCCAAATATCCCAAGAGGAACAGAGGAC...TATTTCCAGTCTTGTTCTTAGTCTCGGCCCATGTCTTGGCTTCCTCACTGGGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039331.9 |
||
| CDS-3UTR TCA 90 bp | TGTTTAATTAAACCCAGTGAGGAAGCCAAGACATGGGCCGAGACTAAGAACAAGGTCCAGAAGGGACAGTaGCTTTTGCATTTTGGTATC | + |
|
Preference number: 4 (lower is better) Translates to: CLIKPSEEAKTWAETKNKVQKGQ*LLHFGI Trigger: GATACCAAAATGCAAAAGTCACTGTCCCTTCTGGAC...CTTGTTCTTAGTCTCGGCCCATGTCTTGGCTTCCTCACTGGGTTTAATTAAACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039331.9 |
||
| CDS CCA 90 bp | GCTTCGGAAGGGCCTGCTGTCCTGGACTGGGCCAGAGCTGGCTGCTaGCAGTTCTGTCAGGGGCACGGCATCTATCGGCTCCCCGTCCCG | + |
|
Preference number: 5 (lower is better) Translates to: ASEGPAVLDWARAGC*QFCQGHGIYRLPVP Trigger: CGGGACGGGGAGCCGATAGATGCCGTGCCCCTGACAGAACTGCCAGCAGCCAGCTCTGGCCCAGTCCAGGACAGCAGGCCCTTCCGAAGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039331.9 |
||
| CDS CCA 90 bp | GGCGCCGGCTTCCCTCCTGACACGATGCAGACCAGTGTGAAGTTCTaGGCCTGGTACCGGCTAAAGGGGGCAGGGGAGTCAGCAGCCACG | + |
|
Preference number: 5 (lower is better) Translates to: GAGFPPDTMQTSVKF*AWYRLKGAGESAAT Trigger: CGTGGCTGCTGACTCCCCTGCCCCCTTTAGCCGGTACCAGGCCCAGAACTTCACACTGGTCTGCATCGTGTCAGGAGGGAAGCCGGCGCC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039331.9 |
||
| CDS CCA 90 bp | GCAGAAGGCTTCGGAAGGGCCTGCTGTCCTGGACTGGGCCAGAGCTaGCTGCTGGCAGTTCTGTCAGGGGCACGGCATCTATCGGCTCCC | + |
|
Preference number: 5 (lower is better) Translates to: AEGFGRACCPGLGQS*LLAVLSGARHLSAP Trigger: GGGAGCCGATAGATGCCGTGCCCCTGACAGAACTGCCAGCAGCCAGCTCTGGCCCAGTCCAGGACAGCAGGCCCTTCCGAAGCCTTCTGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039331.9 |
||
| CDS CCA 90 bp | TCATCCACGTCTCGGTGCAGAAGGCTTCGGAAGGGCCTGCTGTCCTaGACTGGGCCAGAGCTGGCTGCTGGCAGTTCTGTCAGGGGCACG | + |
|
Preference number: 5 (lower is better) Translates to: SSTSRCRRLRKGLLS*TGPELAAGSSVRGT Trigger: CGTGCCCCTGACAGAACTGCCAGCAGCCAGCTCTGGCCCAGTCCAGGACAGCAGGCCCTTCCGAAGCCTTCTGCACCGAGACGTGGATGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039331.9 |
||
| CDS GCA 90 bp | GCAACCAGCGTGACCTCCGCCTGCATGGGCATGGACAGCGCTGGGTaGTTGACCTCACAGCTGAAGAGGGCCTCATTGTCGATCTGCGGG | + |
|
Preference number: 5 (lower is better) Translates to: ATSVTSACMGMDSAG*LTSQLKRASLSICG Trigger: CCCGCAGATCGACAATGAGGCCCTCTTCAGCTGTGAGGTCAAGCACCCAGCGCTGTCCATGCCCATGCAGGCGGAGGTCACGCTGGTTGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039331.9 |
||
| CDS CCA 90 bp | GGGAGCAACCAGCGTGACCTCCGCCTGCATGGGCATGGACAGCGCTaGGTGCTTGACCTCACAGCTGAAGAGGGCCTCATTGTCGATCTG | + |
|
Preference number: 5 (lower is better) Translates to: GSNQRDLRLHGHGQR*VLDLTAEEGLIVDL Trigger: CAGATCGACAATGAGGCCCTCTTCAGCTGTGAGGTCAAGCACCCAGCGCTGTCCATGCCCATGCAGGCGGAGGTCACGCTGGTTGCTCCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039331.9 |
||
| CDS CCA 90 bp | AACACGATGAGCCGAGTGTGTGTATCAGTGGAGCCCAGGGGGTTCTaGGCAGTGCAGCGGTACATGGAGCCGTTGAGCTCGGCAGGAACC | + |
|
Preference number: 5 (lower is better) Translates to: NTMSRVCVSVEPRGF*AVQRYMEPLSSAGT Trigger: GGTTCCTGCCGAGCTCAACGGCTCCATGTACCGCTGCACTGCCCAGAACCCCCTGGGCTCCACTGATACACACACTCGGCTCATCGTGTT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000039331.9 |
||
| CDS TCA 90 bp | GCAGTTCTGTCAGGGGCACGGCATCTATCGGCTCCCCGTCCCGTTTaGAATAAACCATGGGCGCCGGCTTCCCTCCTGACACGATGCAGA | + |
|
Preference number: 5 (lower is better) Translates to: AVLSGARHLSAPRPV*NKPWAPASLLTRCR Trigger: TCTGCATCGTGTCAGGAGGGAAGCCGGCGCCCATGGTTTATTTCAAACGGGACGGGGAGCCGATAGATGCCGTGCCCCTGACAGAACTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039331.9 |
||
| CDS TCA 90 bp | GGCTCGGTCGTAGATACCCACGTGGCACTCATAGGGACCATTGTCTaGGATCCGGACCTCGGGCAGCCTCACGGTGGACTGATACACAAG | + |
|
Preference number: 5 (lower is better) Translates to: GSVVDTHVALIGTIV*DPDLGQPHGGLIHK Trigger: CTTGTGTATCAGTCCACCGTGAGGCTGCCCGAGGTCCGGATCTCAGACAATGGTCCCTATGAGTGCCACGTGGGTATCTACGACCGAGCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039331.9 |
||
| CDS-3UTR CAA 90 bp | AGAAATGAAAATCGATCGCAGAGATGCCGGGCGGCTGGAGCATCGGGAGGAGGCCTGAAGAGGGCCTCATaGTCGATCTGCGGGTTGAGG | + |
|
Preference number: 5 (lower is better) Translates to: RNENRSQRCRAAGASGGGLKRAS*SICGLR Trigger: CCTCAACCCGCAGATCGACAATGAGGCCCTCTTCAG...GCCTCCTCCCGATGCTCCAGCCGCCCGGCATCTCTGCGATCGATTTTCATTTCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039331.9 |
||
| CDS TCA 90 bp | TTCGATGGAGGTGGGAGGAGCCATGACATTGAGGAAGATGTTGCCTaGGGCGAGGACCACCTTCTCCCTCGTGGCTCGGTCGTAGATACC | + |
|
Preference number: 5 (lower is better) Translates to: FDGGGRSHDIEEDVA*GEDHLLPRGSVVDT Trigger: GGTATCTACGACCGAGCCACGAGGGAGAAGGTGGTCCTCGCCTCAGGCAACATCTTCCTCAATGTCATGGCTCCTCCCACCTCCATCGAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039331.9 |
||
| CDS TCA 90 bp | ACTCGGCACTGCCATCCAGGAGGCGGCTGCCCACTCTCGTCCACGTaGACATGGGTTCTGGGAAGACCTCATTCTGAAATCCGTGGACTA | + |
|
Preference number: 5 (lower is better) Translates to: TRHCHPGGGCPLSST*TWVLGRPHSEIRGL Trigger: TAGTCCACGGATTTCAGAATGAGGTCTTCCCAGAACCCATGTTCACGTGGACGAGAGTGGGCAGCCGCCTCCTGGATGGCAGTGCCGAGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039331.9 |
||
| CDS-3UTR CAA 90 bp | AGAAATGAAAATCGATCGCAGAGATGCCGGGCGGCTGGAGCATCGGGAGGAGGCACATTGAGGAAGATGTaGCCTGAGGCGAGGACCACC | + |
|
Preference number: 5 (lower is better) Translates to: RNENRSQRCRAAGASGGGTLRKM*PEARTT Trigger: GGTGGTCCTCGCCTCAGGCAACATCTTCCTCAATGT...GCCTCCTCCCGATGCTCCAGCCGCCCGGCATCTCTGCGATCGATTTTCATTTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039331.9 |
||
| CDS GCA 90 bp | CCTCGGGCAGCCTCACGGTGGACTGATACACAAGGTCCTCCCTCTTaGGGTAATTCTCCATGTGCGAGTAGTTCGTGGAGAACATGGCGT | + |
|
Preference number: 5 (lower is better) Translates to: PRAASRWTDTQGPPS*GNSPCASSSWRTWR Trigger: ACGCCATGTTCTCCACGAACTACTCGCACATGGAGAATTACCGCAAGAGGGAGGACCTTGTGTATCAGTCCACCGTGAGGCTGCCCGAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039331.9 |
||
| CDS CCA 90 bp | GCCAGCGGGGCCGGAAGCAGAACCACGGGAGTCCTCTGTTCCTCTTaGGATATTTGGGTTTTCGAACACGATGAGCCGAGTGTGTGTATC | + |
|
Preference number: 5 (lower is better) Translates to: ASGAGSRTTGVLCSS*DIWVFEHDEPSVCI Trigger: GATACACACACTCGGCTCATCGTGTTCGAAAACCCAAATATCCCAAGAGGAACAGAGGACTCCCGTGGTTCTGCTTCCGGCCCCGCTGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039331.9 |
||
| CDS GCA 90 bp | AGAAGGGACAGTGACTTTTGCATTTTGGTATCATCCACGTCTCGGTaGAGAAGGCTTCGGAAGGGCCTGCTGTCCTGGACTGGGCCAGAG | + |
|
Preference number: 5 (lower is better) Translates to: RRDSDFCILVSSTSR*RRLRKGLLSWTGPE Trigger: CTCTGGCCCAGTCCAGGACAGCAGGCCCTTCCGAAGCCTTCTGCACCGAGACGTGGATGATACCAAAATGCAAAAGTCACTGTCCCTTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039331.9 |
||
| CDS CCA 90 bp | CATAGGGACCATTGTCTGAGATCCGGACCTCGGGCAGCCTCACGGTaGACTGATACACAAGGTCCTCCCTCTTGCGGTAATTCTCCATGT | + |
|
Preference number: 5 (lower is better) Translates to: HRDHCLRSGPRAASR*TDTQGPPSCGNSPC Trigger: ACATGGAGAATTACCGCAAGAGGGAGGACCTTGTGTATCAGTCCACCGTGAGGCTGCCCGAGGTCCGGATCTCAGACAATGGTCCCTATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039331.9 |
||
| CDS-3UTR CAA 90 bp | AAACCCAGTGAGGAAGCCAAGACATGGGCCGAGACTAAGAACAAGACTGGAAATCGGTACATGGAGCCGTaGAGCTCGGCAGGAACCCGC | + |
|
Preference number: 5 (lower is better) Translates to: KPSEEAKTWAETKNKTGNRYMEP*SSAGTR Trigger: GCGGGTTCCTGCCGAGCTCAACGGCTCCATGTACCG...ATTTCCAGTCTTGTTCTTAGTCTCGGCCCATGTCTTGGCTTCCTCACTGGGTTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039331.9 |
||
| CDS CCA 90 bp | CAGCCCGGTATTCAGTGTCCAGAAGGGACAGTGACTTTTGCATTTTaGTATCATCCACGTCTCGGTGCAGAAGGCTTCGGAAGGGCCTGC | + |
|
Preference number: 5 (lower is better) Translates to: QPGIQCPEGTVTFAF*YHPRLGAEGFGRAC Trigger: GCAGGCCCTTCCGAAGCCTTCTGCACCGAGACGTGGATGATACCAAAATGCAAAAGTCACTGTCCCTTCTGGACACTGAATACCGGGCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039331.9 |
||
| CDS TCA 90 bp | CGTGTAGGGACGTCCAGCCCGGTATTCAGTGTCCAGAAGGGACAGTaGCTTTTGCATTTTGGTATCATCCACGTCTCGGTGCAGAAGGCT | + |
|
Preference number: 5 (lower is better) Translates to: RVGTSSPVFSVQKGQ*LLHFGIIHVSVQKA Trigger: AGCCTTCTGCACCGAGACGTGGATGATACCAAAATGCAAAAGTCACTGTCCCTTCTGGACACTGAATACCGGGCTGGACGTCCCTACACG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039331.9 |
||
| CDS GCA 90 bp | GGACGTCCAGCCCGGTATTCAGTGTCCAGAAGGGACAGTGACTTTTaGATTTTGGTATCATCCACGTCTCGGTGCAGAAGGCTTCGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: GRPARYSVSRRDSDF*ILVSSTSRCRRLRK Trigger: CTTCCGAAGCCTTCTGCACCGAGACGTGGATGATACCAAAATGCAAAAGTCACTGTCCCTTCTGGACACTGAATACCGGGCTGGACGTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039331.9 |
||
| CDS-3UTR CAA 90 bp | AACCCAGTGAGGAAGCCAAGACATGGGCCGAGACTAAGAACAAGACTGGAAATATTGTCGATCTGCGGGTaGAGGGTCCAGGTGAGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: NPVRKPRHGPRLRTRLEILSICG*RVQVSR Trigger: CCTGCTCACCTGGACCCTCAACCCGCAGATCGACAA...TATTTCCAGTCTTGTTCTTAGTCTCGGCCCATGTCTTGGCTTCCTCACTGGGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039331.9 |
||
| CDS-3UTR CAA 90 bp | GTTTGTTTAATTAAACCCAGTGAGGAAGCCAAGACATGGGCCGAGACTAAGAACGACAGCGCTGGGTGCTaGACCTCACAGCTGAAGAGG | + |
|
Preference number: 5 (lower is better) Translates to: VCLIKPSEEAKTWAETKNDSAGC*TSQLKR Trigger: CCTCTTCAGCTGTGAGGTCAAGCACCCAGCGCTGTC...GTTCTTAGTCTCGGCCCATGTCTTGGCTTCCTCACTGGGTTTAATTAAACAAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039331.9 |
||
| CDS-3UTR CAA 90 bp | ATTAAACCCAGTGAGGAAGCCAAGACATGGGCCGAGACTAAGAACAAGACTGGAGTGAAGATCTTCTGCTaGATGGTGCCGCCATCTGTC | + |
|
Preference number: 5 (lower is better) Translates to: IKPSEEAKTWAETKNKTGVKIFC*MVPPSV Trigger: GACAGATGGCGGCACCATCAAGCAGAAGATCTTCAC...TCCAGTCTTGTTCTTAGTCTCGGCCCATGTCTTGGCTTCCTCACTGGGTTTAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039331.9 |
||
| CDS-3UTR CAA 90 bp | AACCCAGTGAGGAAGCCAAGACATGGGCCGAGACTAAGAACAAGACTGGAAATAGGCGTCATCATGATTTaGGGTCCTTTGGGAGCAACC | + |
|
Preference number: 5 (lower is better) Translates to: NPVRKPRHGPRLRTRLEIGVIMI*GPLGAT Trigger: GGTTGCTCCCAAAGGACCCAAAATCATGATGACGCC...TATTTCCAGTCTTGTTCTTAGTCTCGGCCCATGTCTTGGCTTCCTCACTGGGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039331.9 |
||
| CDS-3UTR CAA 90 bp | AAACCCAGTGAGGAAGCCAAGACATGGGCCGAGACTAAGAACAAGACTGGAAATATACGGCCGTCTGTCTaGAAGTTACACTTCAGGGTC | + |
|
Preference number: 5 (lower is better) Translates to: KPSEEAKTWAETKNKTGNIRPSV*KLHFRV Trigger: GACCCTGAAGTGTAACTTCAAGACAGACGGCCGTAT...ATTTCCAGTCTTGTTCTTAGTCTCGGCCCATGTCTTGGCTTCCTCACTGGGTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039331.9 |
||
| CDS-3UTR CAA 90 bp | TGTTTAATTAAACCCAGTGAGGAAGCCAAGACATGGGCCGAGACTAAGAACAAGGGAGGAGCCATGACATaGAGGAAGATGTTGCCTGAG | + |
|
Preference number: 5 (lower is better) Translates to: CLIKPSEEAKTWAETKNKGGAMT*RKMLPE Trigger: CTCAGGCAACATCTTCCTCAATGTCATGGCTCCTCC...CTTGTTCTTAGTCTCGGCCCATGTCTTGGCTTCCTCACTGGGTTTAATTAAACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039331.9 |
||
| CDS-3UTR CAA 90 bp | AACCCAGTGAGGAAGCCAAGACATGGGCCGAGACTAAGAACAAGACTGGAAATAAGTGACTTTTGCATTTaGGTATCATCCACGTCTCGG | + |
|
Preference number: 5 (lower is better) Translates to: NPVRKPRHGPRLRTRLEISDFCI*VSSTSR Trigger: CCGAGACGTGGATGATACCAAAATGCAAAAGTCACT...TATTTCCAGTCTTGTTCTTAGTCTCGGCCCATGTCTTGGCTTCCTCACTGGGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039331.9 |
||
| CDS-3UTR CAA 90 bp | GTTTGTTTAATTAAACCCAGTGAGGAAGCCAAGACATGGGCCGAGACTAAGAACAGTCCTCTGTTCCTCTaGGGATATTTGGGTTTTCGA | + |
|
Preference number: 5 (lower is better) Translates to: VCLIKPSEEAKTWAETKNSPLFL*GYLGFR Trigger: TCGAAAACCCAAATATCCCAAGAGGAACAGAGGACT...GTTCTTAGTCTCGGCCCATGTCTTGGCTTCCTCACTGGGTTTAATTAAACAAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039331.9 |
||
| CDS GCA 72 bp | GGGCCCGCACCTCCACCGTGCCATCGCTGCCTGGGGTaGGGCTGTGGCGCAGGAAGTAGACCGGCTCGGCGC | + |
|
Preference number: 6 (lower is better) Translates to: GPAPPPCHRCLG*GCGAGSRPARR Trigger: GCGCCGAGCCGGTCTACTTCCTGCGCCACAGCCGCACCCCAGGCAGCGATGGCACGGTGGAGGTGCGGGCCC 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039331.9 |
||
| CDS CCA 72 bp | GGGCCTGCTGTCCTGGACTGGGCCAGAGCTGGCTGCTaGCAGTTCTGTCAGGGGCACGGCATCTATCGGCTC | + |
|
Preference number: 6 (lower is better) Translates to: GPAVLDWARAGC*QFCQGHGIYRL Trigger: GAGCCGATAGATGCCGTGCCCCTGACAGAACTGCCAGCAGCCAGCTCTGGCCCAGTCCAGGACAGCAGGCCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039331.9 |
||
| CDS TCA 72 bp | GGGGGTTCTGGGCAGTGCAGCGGTACATGGAGCCGTTaGGCTCGGCAGGAACCCGCTCCAGCACAAGCTCCT | + |
|
Preference number: 6 (lower is better) Translates to: GGSGQCSGTWSR*ARQEPAPAQAP Trigger: AGGAGCTTGTGCTGGAGCGGGTTCCTGCCGAGCTCAACGGCTCCATGTACCGCTGCACTGCCCAGAACCCCC 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000039331.9 |
||
| CDS GCA 72 bp | GCTCCAGCACAAGCTCCTTCCCGTCAAACTCGGCACTaGCATCCAGGAGGCGGCTGCCCACTCTCGTCCACG | + |
|
Preference number: 6 (lower is better) Translates to: APAQAPSRQTRH*HPGGGCPLSST Trigger: CGTGGACGAGAGTGGGCAGCCGCCTCCTGGATGGCAGTGCCGAGTTTGACGGGAAGGAGCTTGTGCTGGAGC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039331.9 |
||
| CDS CAA 72 bp | AGGGGGTTCTGGGCAGTGCAGCGGTACATGGAGCCGTaGAGCTCGGCAGGAACCCGCTCCAGCACAAGCTCC | + |
|
Preference number: 6 (lower is better) Translates to: RGFWAVQRYMEP*SSAGTRSSTSS Trigger: GGAGCTTGTGCTGGAGCGGGTTCCTGCCGAGCTCAACGGCTCCATGTACCGCTGCACTGCCCAGAACCCCCT 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000039331.9 |
||
| CDS GCA 72 bp | GGGAAGGGGCTCAATGTTGACTGTCAGGTAGCCGCGTaGCAGGTCCAGAATCGCGGCGAGCAGCAGGCAGGA | + |
|
Preference number: 6 (lower is better) Translates to: GKGLNVDCQVAA*QVQNRGEQQAG Trigger: TCCTGCCTGCTGCTCGCCGCGATTCTGGACCTGGCACGCGGCTACCTGACAGTCAACATTGAGCCCCTTCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039331.9 |
||
| CDS GCA 72 bp | CTCACCACTGTCTCTGGGATGTTTTCCGTGGTGGGCTaGACGAAGAGGCTGGGGTCCTGGGTCAGGCTGCGC | + |
|
Preference number: 6 (lower is better) Translates to: LTTVSGMFSVVG*TKRLGSWVRLR Trigger: GCGCAGCCTGACCCAGGACCCCAGCCTCTTCGTGCAGCCCACCACGGAAAACATCCCAGAGACAGTGGTGAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039331.9 |
||
| CDS CCA 72 bp | CTCGGCTCACCACTGTCTCTGGGATGTTTTCCGTGGTaGGCTGCACGAAGAGGCTGGGGTCCTGGGTCAGGC | + |
|
Preference number: 6 (lower is better) Translates to: LGSPLSLGCFPW*AARRGWGPGSG Trigger: GCCTGACCCAGGACCCCAGCCTCTTCGTGCAGCCCACCACGGAAAACATCCCAGAGACAGTGGTGAGCCGAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039331.9 |
||
| CDS CAA 72 bp | TCACAGCTGAAGAGGGCCTCATTGTCGATCTGCGGGTaGAGGGTCCAGGTGAGCAGGGCCCGCACCTCCACC | + |
|
Preference number: 6 (lower is better) Translates to: SQLKRASLSICG*RVQVSRARTST Trigger: GGTGGAGGTGCGGGCCCTGCTCACCTGGACCCTCAACCCGCAGATCGACAATGAGGCCCTCTTCAGCTGTGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039331.9 |
||
| CDS CAA 90 bp | ACCAGCGTGACCTCCGCCTGCATGGGCATGGACAGCGCTGGGTGCTaGACCTCACAGCTGAAGAGGGCCTCATTGTCGATCTGCGGGTTG | + |
|
Preference number: 6 (lower is better) Translates to: TSVTSACMGMDSAGC*TSQLKRASLSICGL Trigger: CAACCCGCAGATCGACAATGAGGCCCTCTTCAGCTGTGAGGTCAAGCACCCAGCGCTGTCCATGCCCATGCAGGCGGAGGTCACGCTGGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039331.9 |
||
| CDS GCA 72 bp | GTGACCTCCGCCTGCATGGGCATGGACAGCGCTGGGTaGTTGACCTCACAGCTGAAGAGGGCCTCATTGTCG | + |
|
Preference number: 6 (lower is better) Translates to: VTSACMGMDSAG*LTSQLKRASLS Trigger: CGACAATGAGGCCCTCTTCAGCTGTGAGGTCAAGCACCCAGCGCTGTCCATGCCCATGCAGGCGGAGGTCAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039331.9 |
||
| CDS GCA 72 bp | TTGGGTCCTTTGGGAGCAACCAGCGTGACCTCCGCCTaGATGGGCATGGACAGCGCTGGGTGCTTGACCTCA | + |
|
Preference number: 6 (lower is better) Translates to: LGPLGATSVTSA*MGMDSAGCLTS Trigger: TGAGGTCAAGCACCCAGCGCTGTCCATGCCCATGCAGGCGGAGGTCACGCTGGTTGCTCCCAAAGGACCCAA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039331.9 |
||
| CDS CCA 72 bp | CAGCGTGACCTCCGCCTGCATGGGCATGGACAGCGCTaGGTGCTTGACCTCACAGCTGAAGAGGGCCTCATT | + |
|
Preference number: 6 (lower is better) Translates to: QRDLRLHGHGQR*VLDLTAEEGLI Trigger: AATGAGGCCCTCTTCAGCTGTGAGGTCAAGCACCCAGCGCTGTCCATGCCCATGCAGGCGGAGGTCACGCTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039331.9 |
||
| CDS CCA 72 bp | AGCCGAGTGTGTGTATCAGTGGAGCCCAGGGGGTTCTaGGCAGTGCAGCGGTACATGGAGCCGTTGAGCTCG | + |
|
Preference number: 6 (lower is better) Translates to: SRVCVSVEPRGF*AVQRYMEPLSS Trigger: CGAGCTCAACGGCTCCATGTACCGCTGCACTGCCCAGAACCCCCTGGGCTCCACTGATACACACACTCGGCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000039331.9 |
||
| CDS CAA 72 bp | TCCCCAACCCGGGCTCTGCTGGGCGTCATCATGATTTaGGGTCCTTTGGGAGCAACCAGCGTGACCTCCGCC | + |
|
Preference number: 6 (lower is better) Translates to: SPTRALLGVIMI*GPLGATSVTSA Trigger: GGCGGAGGTCACGCTGGTTGCTCCCAAAGGACCCAAAATCATGATGACGCCCAGCAGAGCCCGGGTTGGGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039331.9 |
||
| CDS TCA 72 bp | GGTGGGAGGAGCCATGACATTGAGGAAGATGTTGCCTaGGGCGAGGACCACCTTCTCCCTCGTGGCTCGGTC | + |
|
Preference number: 6 (lower is better) Translates to: GGRSHDIEEDVA*GEDHLLPRGSV Trigger: GACCGAGCCACGAGGGAGAAGGTGGTCCTCGCCTCAGGCAACATCTTCCTCAATGTCATGGCTCCTCCCACC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039331.9 |
||
| CDS CCA 72 bp | ACTCTCGGCTCACCACTGTCTCTGGGATGTTTTCCGTaGTGGGCTGCACGAAGAGGCTGGGGTCCTGGGTCA | + |
|
Preference number: 6 (lower is better) Translates to: TLGSPLSLGCFP*WAARRGWGPGS Trigger: TGACCCAGGACCCCAGCCTCTTCGTGCAGCCCACCACGGAAAACATCCCAGAGACAGTGGTGAGCCGAGAGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039331.9 |
||
| CDS CAA 72 bp | GCTGGGTGCTTGACCTCACAGCTGAAGAGGGCCTCATaGTCGATCTGCGGGTTGAGGGTCCAGGTGAGCAGG | + |
|
Preference number: 6 (lower is better) Translates to: AGCLTSQLKRAS*SICGLRVQVSR Trigger: CCTGCTCACCTGGACCCTCAACCCGCAGATCGACAATGAGGCCCTCTTCAGCTGTGAGGTCAAGCACCCAGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039331.9 |
||
| CDS CAA 72 bp | ACCTCCGCCTGCATGGGCATGGACAGCGCTGGGTGCTaGACCTCACAGCTGAAGAGGGCCTCATTGTCGATC | + |
|
Preference number: 6 (lower is better) Translates to: TSACMGMDSAGC*TSQLKRASLSI Trigger: GATCGACAATGAGGCCCTCTTCAGCTGTGAGGTCAAGCACCCAGCGCTGTCCATGCCCATGCAGGCGGAGGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039331.9 |
||
| CDS TCA 72 bp | GTAGATACCCACGTGGCACTCATAGGGACCATTGTCTaGGATCCGGACCTCGGGCAGCCTCACGGTGGACTG | + |
|
Preference number: 6 (lower is better) Translates to: VDTHVALIGTIV*DPDLGQPHGGL Trigger: CAGTCCACCGTGAGGCTGCCCGAGGTCCGGATCTCAGACAATGGTCCCTATGAGTGCCACGTGGGTATCTAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039331.9 |
||
| CDS CCA 72 bp | AGATGTTGCCTGAGGCGAGGACCACCTTCTCCCTCGTaGCTCGGTCGTAGATACCCACGTGGCACTCATAGG | + |
|
Preference number: 6 (lower is better) Translates to: RCCLRRGPPSPS*LGRRYPRGTHR Trigger: CCTATGAGTGCCACGTGGGTATCTACGACCGAGCCACGAGGGAGAAGGTGGTCCTCGCCTCAGGCAACATCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039331.9 |
||
| CDS CCA 72 bp | TTCCCTCCTGACACGATGCAGACCAGTGTGAAGTTCTaGGCCTGGTACCGGCTAAAGGGGGCAGGGGAGTCA | + |
|
Preference number: 6 (lower is better) Translates to: FPPDTMQTSVKF*AWYRLKGAGES Trigger: TGACTCCCCTGCCCCCTTTAGCCGGTACCAGGCCCAGAACTTCACACTGGTCTGCATCGTGTCAGGAGGGAA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039331.9 |
||
| CDS CCA 72 bp | TACCCAACGGGGGAACTCTCGGCTCACCACTGTCTCTaGGATGTTTTCCGTGGTGGGCTGCACGAAGAGGCT | + |
|
Preference number: 6 (lower is better) Translates to: YPTGELSAHHCL*DVFRGGLHEEA Trigger: AGCCTCTTCGTGCAGCCCACCACGGAAAACATCCCAGAGACAGTGGTGAGCCGAGAGTTCCCCCGTTGGGTA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039331.9 |
||
| CDS CAA 72 bp | CGGTACCACACGATCTCACGCATACGGCCGTCTGTCTaGAAGTTACACTTCAGGGTCACTGCGTCCCCAGCC | + |
|
Preference number: 6 (lower is better) Translates to: RYHTISRIRPSV*KLHFRVTASPA Trigger: GGCTGGGGACGCAGTGACCCTGAAGTGTAACTTCAAGACAGACGGCCGTATGCGTGAGATCGTGTGGTACCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039331.9 |
||
| CDS CAA 72 bp | ATGGAGGTGGGAGGAGCCATGACATTGAGGAAGATGTaGCCTGAGGCGAGGACCACCTTCTCCCTCGTGGCT | + |
|
Preference number: 6 (lower is better) Translates to: MEVGGAMTLRKM*PEARTTFSLVA Trigger: AGCCACGAGGGAGAAGGTGGTCCTCGCCTCAGGCAACATCTTCCTCAATGTCATGGCTCCTCCCACCTCCAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039331.9 |
||
| CDS TCA 72 bp | GGTACCACACGATCTCACGCATACGGCCGTCTGTCTTaGAGTTACACTTCAGGGTCACTGCGTCCCCAGCCA | + |
|
Preference number: 6 (lower is better) Translates to: GTTRSHAYGRLS*SYTSGSLRPQP Trigger: TGGCTGGGGACGCAGTGACCCTGAAGTGTAACTTCAAGACAGACGGCCGTATGCGTGAGATCGTGTGGTACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039331.9 |
||
| CDS TCA 72 bp | CCGTTTGAAATAAACCATGGGCGCCGGCTTCCCTCCTaGCACGATGCAGACCAGTGTGAAGTTCTGGGCCTG | + |
|
Preference number: 6 (lower is better) Translates to: PFEINHGRRLPS*HDADQCEVLGL Trigger: CAGGCCCAGAACTTCACACTGGTCTGCATCGTGTCAGGAGGGAAGCCGGCGCCCATGGTTTATTTCAAACGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039331.9 |
||
| CDS TCA 72 bp | TGCCATCCAGGAGGCGGCTGCCCACTCTCGTCCACGTaGACATGGGTTCTGGGAAGACCTCATTCTGAAATC | + |
|
Preference number: 6 (lower is better) Translates to: CHPGGGCPLSST*TWVLGRPHSEI Trigger: GATTTCAGAATGAGGTCTTCCCAGAACCCATGTTCACGTGGACGAGAGTGGGCAGCCGCCTCCTGGATGGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039331.9 |
||
| CDS CCA 72 bp | CATTGTCTGAGATCCGGACCTCGGGCAGCCTCACGGTaGACTGATACACAAGGTCCTCCCTCTTGCGGTAAT | + |
|
Preference number: 6 (lower is better) Translates to: HCLRSGPRAASR*TDTQGPPSCGN Trigger: ATTACCGCAAGAGGGAGGACCTTGTGTATCAGTCCACCGTGAGGCTGCCCGAGGTCCGGATCTCAGACAATG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039331.9 |
||
| CDS CAA 72 bp | GTGGAGAACATGGCGTCAAACGTGAAGATCTTCTGCTaGATGGTGCCGCCATCTGTCACCCGGTACCACACG | + |
|
Preference number: 6 (lower is better) Translates to: VENMASNVKIFC*MVPPSVTRYHT Trigger: CGTGTGGTACCGGGTGACAGATGGCGGCACCATCAAGCAGAAGATCTTCACGTTTGACGCCATGTTCTCCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039331.9 |
||
| CDS CAA 90 bp | CCAGCCCGGTATTCAGTGTCCAGAAGGGACAGTGACTTTTGCATTTaGGTATCATCCACGTCTCGGTGCAGAAGGCTTCGGAAGGGCCTG | + |
|
Preference number: 6 (lower is better) Translates to: PARYSVSRRDSDFCI*VSSTSRCRRLRKGL Trigger: CAGGCCCTTCCGAAGCCTTCTGCACCGAGACGTGGATGATACCAAAATGCAAAAGTCACTGTCCCTTCTGGACACTGAATACCGGGCTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039331.9 |
||
| CDS GCA 72 bp | TTCGTGGAGAACATGGCGTCAAACGTGAAGATCTTCTaGTTGATGGTGCCGCCATCTGTCACCCGGTACCAC | + |
|
Preference number: 6 (lower is better) Translates to: FVENMASNVKIF*LMVPPSVTRYH Trigger: GTGGTACCGGGTGACAGATGGCGGCACCATCAAGCAGAAGATCTTCACGTTTGACGCCATGTTCTCCACGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039331.9 |
||
| CDS GCA 72 bp | GCCTCACGGTGGACTGATACACAAGGTCCTCCCTCTTaGGGTAATTCTCCATGTGCGAGTAGTTCGTGGAGA | + |
|
Preference number: 6 (lower is better) Translates to: ASRWTDTQGPPS*GNSPCASSSWR Trigger: TCTCCACGAACTACTCGCACATGGAGAATTACCGCAAGAGGGAGGACCTTGTGTATCAGTCCACCGTGAGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039331.9 |
||
| CDS CCA 72 bp | GCCGGAAGCAGAACCACGGGAGTCCTCTGTTCCTCTTaGGATATTTGGGTTTTCGAACACGATGAGCCGAGT | + |
|
Preference number: 6 (lower is better) Translates to: AGSRTTGVLCSS*DIWVFEHDEPS Trigger: ACTCGGCTCATCGTGTTCGAAAACCCAAATATCCCAAGAGGAACAGAGGACTCCCGTGGTTCTGCTTCCGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039331.9 |
||
| CDS TCA 72 bp | ACGTCCAGCCCGGTATTCAGTGTCCAGAAGGGACAGTaGCTTTTGCATTTTGGTATCATCCACGTCTCGGTG | + |
|
Preference number: 6 (lower is better) Translates to: TSSPVFSVQKGQ*LLHFGIIHVSV Trigger: CACCGAGACGTGGATGATACCAAAATGCAAAAGTCACTGTCCCTTCTGGACACTGAATACCGGGCTGGACGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039331.9 |
||
| CDS CCA 72 bp | ATTCAGTGTCCAGAAGGGACAGTGACTTTTGCATTTTaGTATCATCCACGTCTCGGTGCAGAAGGCTTCGGA | + |
|
Preference number: 6 (lower is better) Translates to: IQCPEGTVTFAF*YHPRLGAEGFG Trigger: TCCGAAGCCTTCTGCACCGAGACGTGGATGATACCAAAATGCAAAAGTCACTGTCCCTTCTGGACACTGAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039331.9 |
||
| CDS CAA 72 bp | TATTCAGTGTCCAGAAGGGACAGTGACTTTTGCATTTaGGTATCATCCACGTCTCGGTGCAGAAGGCTTCGG | + |
|
Preference number: 6 (lower is better) Translates to: YSVSRRDSDFCI*VSSTSRCRRLR Trigger: CCGAAGCCTTCTGCACCGAGACGTGGATGATACCAAAATGCAAAAGTCACTGTCCCTTCTGGACACTGAATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039331.9 |
||