Pregenerated sensors for IGSF11 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000022790Ensembl transcript IDs: ENSMUST00000023478.8, ENSMUST00000114706.8
Found 147 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AAAAGGTATGTGCAGCCAGTGATGGCTTCCATTCACTTACATCACTaGAGAGAGGAGGCCACTCCCTGTGAGGACTGTGCCCATGGGACA | + |
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Preference number: 1 (lower is better) Translates to: KRYVQPVMASIHLHH*REEATPCEDCAHGT Trigger: TGTCCCATGGGCACAGTCCTCACAGGGAGTGGCCTCCTCTCTCCAGTGATGTAAGTGAATGGAAGCCATCACTGGCTGCACATACCTTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023478.8 |
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| 3UTR CCA 90 bp | TCAGGACATCTGTGGTGGGGAAACAGTCTTCTTGAGTCTTCATTATaGAACAACCCCAGGCCACTTCACACACGCCTCCTCTTTGTGCTT | + |
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Preference number: 1 (lower is better) Translates to: SGHLWWGNSLLESSL*NNPRPLHTRLLFVL Trigger: AAGCACAAAGAGGAGGCGTGTGTGAAGTGGCCTGGGGTTGTTCCATAATGAAGACTCAAGAAGACTGTTTCCCCACCACAGATGTCCTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023478.8 |
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| 3UTR TCA 90 bp | AAACAGATCTTGGAAGAGATCACCATGAGTTGCCCTAAAGCAAAGTaGTTAAGGCAGGATAGTCACCAAGACAGACATGGCAGGCGGCGC | + |
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Preference number: 1 (lower is better) Translates to: KQILEEITMSCPKAK*LRQDSHQDRHGRRR Trigger: GCGCCGCCTGCCATGTCTGTCTTGGTGACTATCCTGCCTTAATCACTTTGCTTTAGGGCAACTCATGGTGATCTCTTCCAAGATCTGTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023478.8 |
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| 3UTR-3UTR CCA 90 bp | GAGAGGAGGCCACTCCCTGTGAGGACTGTGCCCATGGGACAGGGAAAGAAGGCAAAGGCCCCTCCCACCTaGCTCCAGCTGGTTCCACCC | + |
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Preference number: 2 (lower is better) Translates to: ERRPLPVRTVPMGQGKKAKAPPT*LQLVPP Trigger: GGGTGGAACCAGCTGGAGCCAGGTGGGAGGGGCCTT...TGCCTTCTTTCCCTGTCCCATGGGCACAGTCCTCACAGGGAGTGGCCTCCTCTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023478.8 |
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| 3UTR CAA 90 bp | CAGGCGCTGTCCTCATTAACGGTTGCCATACACAATCTCAATTCTTaGGGGCCCTGCTGGCAATGTAAAGGCCCCTCCCACCTGGCTCCA | + |
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Preference number: 2 (lower is better) Translates to: QALSSLTVAIHNLNS*GPCWQCKGPSHLAP Trigger: TGGAGCCAGGTGGGAGGGGCCTTTACATTGCCAGCAGGGCCCCAAAGAATTGAGATTGTGTATGGCAACCGTTAATGAGGACAGCGCCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023478.8 |
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| 3UTR-3UTR GCA 90 bp | CGGTACAAAAGGCATCAGGCGCTGTCCTCATTAACGGTTGCCATACACAATCTCTCCCACTCTCCCTCTTaGCTGAAGGCAGTGCTCCCC | + |
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Preference number: 2 (lower is better) Translates to: RYKRHQALSSLTVAIHNLSHSPS*LKAVLP Trigger: GGGGAGCACTGCCTTCAGGCAAGAGGGAGAGTGGGA...GAGATTGTGTATGGCAACCGTTAATGAGGACAGCGCCTGATGCCTTTTGTACCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023478.8 |
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| 3UTR-3UTR GCA 90 bp | GCTGGCAATGTAAAGGCCCCTCCCACCTGGCTCCAGCTGGTTCCACCCACTCAACACGCCTCCTCTTTGTaGTTTTTGCTAATGGAATCG | + |
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Preference number: 2 (lower is better) Translates to: AGNVKAPPTWLQLVPPTQHASSL*FLLMES Trigger: CGATTCCATTAGCAAAAAGCACAAAGAGGAGGCGTG...TTGAGTGGGTGGAACCAGCTGGAGCCAGGTGGGAGGGGCCTTTACATTGCCAGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023478.8 |
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| 3UTR-3UTR CCA 90 bp | GAGAGGAGGCCACTCCCTGTGAGGACTGTGCCCATGGGACAGGGAAAGAAGGCAATCTCAGGACATCTGTaGTGGGGAAACAGTCTTCTT | + |
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Preference number: 2 (lower is better) Translates to: ERRPLPVRTVPMGQGKKAISGHL*WGNSLL Trigger: AAGAAGACTGTTTCCCCACCACAGATGTCCTGAGAT...TGCCTTCTTTCCCTGTCCCATGGGCACAGTCCTCACAGGGAGTGGCCTCCTCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023478.8 |
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| 3UTR-3UTR CCA 90 bp | AATCGCACACCCAAATTTCCAGATGCTGAGCAGACCCCCAAGAGCACACAGGAATCTTTGGGGCCCTGCTaGCAATGTAAAGGCCCCTCC | + |
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Preference number: 2 (lower is better) Translates to: NRTPKFPDAEQTPKSTQESLGPC*QCKGPS Trigger: GGAGGGGCCTTTACATTGCCAGCAGGGCCCCAAAGA...TTCCTGTGTGCTCTTGGGGGTCTGCTCAGCATCTGGAAATTTGGGTGTGCGATT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000023478.8 |
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| 3UTR-3UTR TCA 90 bp | GCTGGCAATGTAAAGGCCCCTCCCACCTGGCTCCAGCTGGTTCCACCCACTCAAATTCCACCTGGCACTTaGAGGGTCCTGAAAATAATT | + |
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Preference number: 2 (lower is better) Translates to: AGNVKAPPTWLQLVPPTQIPPGT*RVLKII Trigger: AATTATTTTCAGGACCCTTCAAGTGCCAGGTGGAAT...TTGAGTGGGTGGAACCAGCTGGAGCCAGGTGGGAGGGGCCTTTACATTGCCAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023478.8 |
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| 3UTR-3UTR GCA 90 bp | GAGGCCACTCCCTGTGAGGACTGTGCCCATGGGACAGGGAAAGAAGGCAGGAAGGCACATCTCTGGAGATaGAGCATGTTTCGTTTTAAC | + |
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Preference number: 2 (lower is better) Translates to: EATPCEDCAHGTGKEGRKAHLWR*SMFRFN Trigger: GTTAAAACGAAACATGCTGCATCTCCAGAGATGTGC...CTTCCTGCCTTCTTTCCCTGTCCCATGGGCACAGTCCTCACAGGGAGTGGCCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023478.8 |
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| 3UTR-3UTR CCA 90 bp | CGGTACAAAAGGCATCAGGCGCTGTCCTCATTAACGGTTGCCATACACAATCTCTGTCATCAGAAGGAGTaGGAGAGGGAGACTAGGCCA | + |
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Preference number: 2 (lower is better) Translates to: RYKRHQALSSLTVAIHNLCHQKE*ERETRP Trigger: TGGCCTAGTCTCCCTCTCCCACTCCTTCTGATGACA...GAGATTGTGTATGGCAACCGTTAATGAGGACAGCGCCTGATGCCTTTTGTACCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023478.8 |
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| 3UTR-3UTR CCA 90 bp | AACATCGAAACGGTCACAGCAGTGACTTCCCGAGTGTCCCTTTTGAAAAAGGTATCACCAAGACAGACATaGCAGGCGGCGCCATACAGA | + |
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Preference number: 2 (lower is better) Translates to: NIETVTAVTSRVSLLKKVSPRQT*QAAPYR Trigger: TCTGTATGGCGCCGCCTGCCATGTCTGTCTTGGTGA...TACCTTTTTCAAAAGGGACACTCGGGAAGTCACTGCTGTGACCGTTTCGATGTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023478.8 |
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| 3UTR-3UTR CCA 90 bp | AATCGCACACCCAAATTTCCAGATGCTGAGCAGACCCCCAAGAGCACACAGGAAACAATCTCAATTCTTTaGGGCCCTGCTGGCAATGTA | + |
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Preference number: 2 (lower is better) Translates to: NRTPKFPDAEQTPKSTQETISIL*GPAGNV Trigger: TACATTGCCAGCAGGGCCCCAAAGAATTGAGATTGT...TTCCTGTGTGCTCTTGGGGGTCTGCTCAGCATCTGGAAATTTGGGTGTGCGATT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023478.8 |
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| 3UTR-3UTR CCA 90 bp | CGGTACAAAAGGCATCAGGCGCTGTCCTCATTAACGGTTGCCATACACAATCTCCTTGAGTCTTCATTATaGAACAACCCCAGGCCACTT | + |
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Preference number: 2 (lower is better) Translates to: RYKRHQALSSLTVAIHNLLESSL*NNPRPL Trigger: AAGTGGCCTGGGGTTGTTCCATAATGAAGACTCAAG...GAGATTGTGTATGGCAACCGTTAATGAGGACAGCGCCTGATGCCTTTTGTACCG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023478.8 |
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| 3UTR CAA 90 bp | ATCAACATCGAAACGGTCACAGCAGTGACTTCCCGAGTGTCCCTTTaGAAAAAGGTATGTGCAGCCAGTGATGGCTTCCATTCACTTACA | + |
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Preference number: 2 (lower is better) Translates to: INIETVTAVTSRVSL*KKVCAASDGFHSLT Trigger: TGTAAGTGAATGGAAGCCATCACTGGCTGCACATACCTTTTTCAAAAGGGACACTCGGGAAGTCACTGCTGTGACCGTTTCGATGTTGAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023478.8 |
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| 3UTR-3UTR CCA 90 bp | ATGAGAATCTGTCAATATAGCAAAATCACCAATACGATTCATGGTTCAGGAGGAGGCTTGGCACATCTCTaGAGATGCAGCATGTTTCGT | + |
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Preference number: 2 (lower is better) Translates to: MRICQYSKITNTIHGSGGGLAHL*RCSMFR Trigger: ACGAAACATGCTGCATCTCCAGAGATGTGCCAAGCC...TCCTCCTGAACCATGAATCGTATTGGTGATTTTGCTATATTGACAGATTCTCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023478.8 |
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| 3UTR-3UTR CCA 90 bp | ATGAGAATCTGTCAATATAGCAAAATCACCAATACGATTCATGGTTCAGGAGGAGCATTCTCCTTGGCTTaGCACATCTCTGGAGATGCA | + |
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Preference number: 2 (lower is better) Translates to: MRICQYSKITNTIHGSGGAFSLA*HISGDA Trigger: TGCATCTCCAGAGATGTGCCAAGCCAAGGAGAATGC...TCCTCCTGAACCATGAATCGTATTGGTGATTTTGCTATATTGACAGATTCTCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023478.8 |
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| 3UTR-3UTR GCA 90 bp | CAGATGAGAATCTGTCAATATAGCAAAATCACCAATACGATTCATGGTTCAGGATCAGGTCAGATGGAATaGATTGCTAGTGTCATCAGA | + |
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Preference number: 2 (lower is better) Translates to: QMRICQYSKITNTIHGSGSGQME*IASVIR Trigger: TCTGATGACACTAGCAATGCATTCCATCTGACCTGA...TCCTGAACCATGAATCGTATTGGTGATTTTGCTATATTGACAGATTCTCATCTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023478.8 |
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| 3UTR-3UTR TCA 90 bp | ATGAGAATCTGTCAATATAGCAAAATCACCAATACGATTCATGGTTCAGGAGGACCATTTATTCTCTTCTaGACATGGTTTCCTCAGTCA | + |
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Preference number: 2 (lower is better) Translates to: MRICQYSKITNTIHGSGGPFILF*TWFPQS Trigger: TGACTGAGGAAACCATGTTCAGAAGAGAATAAATGG...TCCTCCTGAACCATGAATCGTATTGGTGATTTTGCTATATTGACAGATTCTCAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023478.8 |
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| 3UTR-3UTR CAA 90 bp | GAGGCCACTCCCTGTGAGGACTGTGCCCATGGGACAGGGAAAGAAGGCAGGAAGGGCCAGACCATGAGCTaGCTCCTGTTTTCTCTCCCT | + |
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Preference number: 3 (lower is better) Translates to: EATPCEDCAHGTGKEGRKGQTMS*LLFSLP Trigger: AGGGAGAGAAAACAGGAGCAAGCTCATGGTCTGGCC...CTTCCTGCCTTCTTTCCCTGTCCCATGGGCACAGTCCTCACAGGGAGTGGCCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023478.8 |
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| 3UTR-3UTR CAA 90 bp | GCTGGCAATGTAAAGGCCCCTCCCACCTGGCTCCAGCTGGTTCCACCCACTCAACTTCTAGCATTCTCCTaGGCTTGGCACATCTCTGGA | + |
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Preference number: 3 (lower is better) Translates to: AGNVKAPPTWLQLVPPTQLLAFS*AWHISG Trigger: TCCAGAGATGTGCCAAGCCAAGGAGAATGCTAGAAG...TTGAGTGGGTGGAACCAGCTGGAGCCAGGTGGGAGGGGCCTTTACATTGCCAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023478.8 |
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| 3UTR CCA 72 bp | GTGCAGCCAGTGATGGCTTCCATTCACTTACATCACTaGAGAGAGGAGGCCACTCCCTGTGAGGACTGTGCC | + |
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Preference number: 3 (lower is better) Translates to: VQPVMASIHLHH*REEATPCEDCA Trigger: GGCACAGTCCTCACAGGGAGTGGCCTCCTCTCTCCAGTGATGTAAGTGAATGGAAGCCATCACTGGCTGCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023478.8 |
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| 3UTR GCA 72 bp | ACGGTTGCCATACACAATCTCAATTCTTTGGGGCCCTaGTGGCAATGTAAAGGCCCCTCCCACCTGGCTCCA | + |
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Preference number: 3 (lower is better) Translates to: TVAIHNLNSLGP*WQCKGPSHLAP Trigger: TGGAGCCAGGTGGGAGGGGCCTTTACATTGCCAGCAGGGCCCCAAAGAATTGAGATTGTGTATGGCAACCGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023478.8 |
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| 3UTR-3UTR CAA 90 bp | GAGAGGAGGCCACTCCCTGTGAGGACTGTGCCCATGGGACAGGGAAAGAAGGCAACACACGCCTCCTCTTaGTGCTTTTTGCTAATGGAA | + |
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Preference number: 3 (lower is better) Translates to: ERRPLPVRTVPMGQGKKATHASS*CFLLME Trigger: TTCCATTAGCAAAAAGCACAAAGAGGAGGCGTGTGT...TGCCTTCTTTCCCTGTCCCATGGGCACAGTCCTCACAGGGAGTGGCCTCCTCTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023478.8 |
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| 3UTR-3UTR CAA 90 bp | GAGAGGAGGCCACTCCCTGTGAGGACTGTGCCCATGGGACAGGGAAAGAAGGCAGGGGAAACAGTCTTCTaGAGTCTTCATTATGGAACA | + |
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Preference number: 3 (lower is better) Translates to: ERRPLPVRTVPMGQGKKAGETVF*SLHYGT Trigger: TGTTCCATAATGAAGACTCAAGAAGACTGTTTCCCC...TGCCTTCTTTCCCTGTCCCATGGGCACAGTCCTCACAGGGAGTGGCCTCCTCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023478.8 |
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| 3UTR CCA 72 bp | CTGTGGTGGGGAAACAGTCTTCTTGAGTCTTCATTATaGAACAACCCCAGGCCACTTCACACACGCCTCCTC | + |
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Preference number: 3 (lower is better) Translates to: LWWGNSLLESSL*NNPRPLHTRLL Trigger: GAGGAGGCGTGTGTGAAGTGGCCTGGGGTTGTTCCATAATGAAGACTCAAGAAGACTGTTTCCCCACCACAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023478.8 |
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| 3UTR GCA 72 bp | GTACAAAAGGCATCAGGCGCTGTCCTCATTAACGGTTaGCATACACAATCTCAATTCTTTGGGGCCCTGCTG | + |
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Preference number: 3 (lower is better) Translates to: VQKASGAVLING*HTQSQFFGALL Trigger: CAGCAGGGCCCCAAAGAATTGAGATTGTGTATGGCAACCGTTAATGAGGACAGCGCCTGATGCCTTTTGTAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023478.8 |
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| 3UTR TCA 72 bp | CCGAGTGTCCCTTTTGAAAAAGGTATGTGCAGCCAGTaGTGGCTTCCATTCACTTACATCACTGGAGAGAGG | + |
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Preference number: 3 (lower is better) Translates to: PSVPFEKGMCSQ*WLPFTYITGER Trigger: CCTCTCTCCAGTGATGTAAGTGAATGGAAGCCATCACTGGCTGCACATACCTTTTTCAAAAGGGACACTCGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023478.8 |
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| 3UTR TCA 72 bp | GCACATCTCTGGAGATGCAGCATGTTTCGTTTTAACTaGATCTCAGGACATCTGTGGTGGGGAAACAGTCTT | + |
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Preference number: 3 (lower is better) Translates to: AHLWRCSMFRFN*ISGHLWWGNSL Trigger: AAGACTGTTTCCCCACCACAGATGTCCTGAGATTCAGTTAAAACGAAACATGCTGCATCTCCAGAGATGTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023478.8 |
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| 3UTR TCA 72 bp | TTGGAAGAGATCACCATGAGTTGCCCTAAAGCAAAGTaGTTAAGGCAGGATAGTCACCAAGACAGACATGGC | + |
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Preference number: 3 (lower is better) Translates to: LEEITMSCPKAK*LRQDSHQDRHG Trigger: GCCATGTCTGTCTTGGTGACTATCCTGCCTTAATCACTTTGCTTTAGGGCAACTCATGGTGATCTCTTCCAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023478.8 |
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| 3UTR-3UTR CAA 90 bp | AAGAGGCAATTATCTTCCTCGGTACAAAAGGCATCAGGCGCTGTCCTCATTAACGCCTCTGTTCAGTCATaGAATACAGTCACTAGACAA | + |
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Preference number: 3 (lower is better) Translates to: KRQLSSSVQKASGAVLINASVQS*NTVTRQ Trigger: TTGTCTAGTGACTGTATTCAATGACTGAACAGAGGC...GTTAATGAGGACAGCGCCTGATGCCTTTTGTACCGAGGAAGATAATTGCCTCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023478.8 |
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| 3UTR GCA 72 bp | AATTTTGCCTCTATGATAAAGTCAGGTCAGATGGAATaGATTGCTAGTGTCATCAGAAGGAGTGGGAGAGGG | + |
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Preference number: 3 (lower is better) Translates to: NFASMIKSGQME*IASVIRRSGRG Trigger: CCCTCTCCCACTCCTTCTGATGACACTAGCAATGCATTCCATCTGACCTGACTTTATCATAGAGGCAAAATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023478.8 |
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| 3UTR GCA 72 bp | TTTCTCCCCATCTCCAGCCAGTGTTCTGAACAATTTTaGCTCTATGATAAAGTCAGGTCAGATGGAATGCAT | + |
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Preference number: 3 (lower is better) Translates to: FLPISSQCSEQF*LYDKVRSDGMH Trigger: ATGCATTCCATCTGACCTGACTTTATCATAGAGGCAAAATTGTTCAGAACACTGGCTGGAGATGGGGAGAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023478.8 |
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| CDS-3UTR GCA 90 bp | AGGCCACTCCCTGTGAGGACTGTGCCCATGGGACAGGGAAAGAAGGCAGGAAGCCTATACCAGGGACCCTaGTCGACTCTGGGCAGGCAC | + |
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Preference number: 4 (lower is better) Translates to: RPLPVRTVPMGQGKKAGSLYQGP*STLGRH Trigger: GTGCCTGCCCAGAGTCGAGCAGGGTCCCTGGTATAG...GCTTCCTGCCTTCTTTCCCTGTCCCATGGGCACAGTCCTCACAGGGAGTGGCCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023478.8 |
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| CDS-3UTR GCA 90 bp | CGGTACAAAAGGCATCAGGCGCTGTCCTCATTAACGGTTGCCATACACAATCTCGGCGCAGGGCAGGACTaGTGTCTGGCCCCGGGCCAC | + |
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Preference number: 4 (lower is better) Translates to: RYKRHQALSSLTVAIHNLGAGQD*CLAPGH Trigger: GTGGCCCGGGGCCAGACAGCAGTCCTGCCCTGCGCC...GAGATTGTGTATGGCAACCGTTAATGAGGACAGCGCCTGATGCCTTTTGTACCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023478.8 |
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| CDS-3UTR TCA 90 bp | AGGCCACTCCCTGTGAGGACTGTGCCCATGGGACAGGGAAAGAAGGCAGGAAGCTTCCTGGGCAAGACCTaGGGTGATGACCCTCTGTTG | + |
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Preference number: 4 (lower is better) Translates to: RPLPVRTVPMGQGKKAGSFLGKT*GDDPLL Trigger: CAACAGAGGGTCATCACCTCAGGTCTTGCCCAGGAA...GCTTCCTGCCTTCTTTCCCTGTCCCATGGGCACAGTCCTCACAGGGAGTGGCCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023478.8 |
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| CDS-3UTR GCA 90 bp | GAGAGGAGGCCACTCCCTGTGAGGACTGTGCCCATGGGACAGGGAAAGAAGGCACCAAGCACTGGTACGTaGCCGTATCTGACAGCTGTG | + |
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Preference number: 4 (lower is better) Translates to: ERRPLPVRTVPMGQGKKAPSTGT*PYLTAV Trigger: CACAGCTGTCAGATACGGGCACGTACCAGTGCTTGG...TGCCTTCTTTCCCTGTCCCATGGGCACAGTCCTCACAGGGAGTGGCCTCCTCTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023478.8 |
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| CDS-3UTR TCA 90 bp | GAGGCCACTCCCTGTGAGGACTGTGCCCATGGGACAGGGAAAGAAGGCAGGAAGAGGCTTCCTGCTGACTaGACCATTGTTCCTGGGCAA | + |
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Preference number: 4 (lower is better) Translates to: EATPCEDCAHGTGKEGRKRLPAD*TIVPGQ Trigger: TTGCCCAGGAACAATGGTTCAGTCAGCAGGAAGCCT...CTTCCTGCCTTCTTTCCCTGTCCCATGGGCACAGTCCTCACAGGGAGTGGCCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023478.8 |
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| CDS-3UTR CCA 90 bp | AATCGCACACCCAAATTTCCAGATGCTGAGCAGACCCCCAAGAGCACACAGGAAGGAGGGCAGCACTGGTaGAGAAGGCGCAGGGCAGGA | + |
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Preference number: 4 (lower is better) Translates to: NRTPKFPDAEQTPKSTQEGGQHW*RRRRAG Trigger: TCCTGCCCTGCGCCTTCTCCACCAGTGCTGCCCTCC...TTCCTGTGTGCTCTTGGGGGTCTGCTCAGCATCTGGAAATTTGGGTGTGCGATT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023478.8 |
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| CDS-3UTR CCA 90 bp | GCTGGCAATGTAAAGGCCCCTCCCACCTGGCTCCAGCTGGTTCCACCCACTCAATCACTGCCGAGGTCCTaGGATCCTTGGATTTGGCAT | + |
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Preference number: 4 (lower is better) Translates to: AGNVKAPPTWLQLVPPTQSLPRS*DPWIWH Trigger: ATGCCAAATCCAAGGATCCCAGGACCTCGGCAGTGA...TTGAGTGGGTGGAACCAGCTGGAGCCAGGTGGGAGGGGCCTTTACATTGCCAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023478.8 |
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| CDS-3UTR TCA 90 bp | GAGAGGAGGCCACTCCCTGTGAGGACTGTGCCCATGGGACAGGGAAAGAAGGCACACCCTGATAAAGAATaGCCTGTTCGGGCTGGTTTG | + |
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Preference number: 4 (lower is better) Translates to: ERRPLPVRTVPMGQGKKAHPDKE*PVRAGL Trigger: CAAACCAGCCCGAACAGGTCATTCTTTATCAGGGTG...TGCCTTCTTTCCCTGTCCCATGGGCACAGTCCTCACAGGGAGTGGCCTCCTCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023478.8 |
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| CDS-3UTR CCA 90 bp | GCTAGTGTCATCAGAAGGAGTGGGAGAGGGAGACTAGGCCAGACCATGAGCTTGTCTCCCAAAGGTACGTaGGCCGAGGGATGCCTTCCT | + |
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Preference number: 4 (lower is better) Translates to: ASVIRRSGRGRLGQTMSLSPKGT*AEGCLP Trigger: AGGAAGGCATCCCTCGGCCCACGTACCTTTGGGAGA...CAAGCTCATGGTCTGGCCTAGTCTCCCTCTCCCACTCCTTCTGATGACACTAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023478.8 |
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| CDS-3UTR GCA 90 bp | CTGTGGTGGGGAAACAGTCTTCTTGAGTCTTCATTATGGAACAACCCCAGGCCAGGGCCACCTGGACACTaGCTGGGCTCTCGGACACTT | + |
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Preference number: 4 (lower is better) Translates to: LWWGNSLLESSLWNNPRPGPPGH*LGSRTL Trigger: AAGTGTCCGAGAGCCCAGGCAGTGTCCAGGTGGCCC...TGGCCTGGGGTTGTTCCATAATGAAGACTCAAGAAGACTGTTTCCCCACCACAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023478.8 |
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| CDS-3UTR CCA 90 bp | AACATCGAAACGGTCACAGCAGTGACTTCCCGAGTGTCCCTTTTGAAAAAGGTAGGCAGGACTGCTGTCTaGCCCCGGGCCACCTGGACA | + |
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Preference number: 4 (lower is better) Translates to: NIETVTAVTSRVSLLKKVGRTAV*PRATWT Trigger: TGTCCAGGTGGCCCGGGGCCAGACAGCAGTCCTGCC...TACCTTTTTCAAAAGGGACACTCGGGAAGTCACTGCTGTGACCGTTTCGATGTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000023478.8 |
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| CDS-3UTR CCA 90 bp | CTGTGGTGGGGAAACAGTCTTCTTGAGTCTTCATTATGGAACAACCCCAGGCCATCAGGAGGGCAGCACTaGTGGAGAAGGCGCAGGGCA | + |
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Preference number: 4 (lower is better) Translates to: LWWGNSLLESSLWNNPRPSGGQH*WRRRRA Trigger: TGCCCTGCGCCTTCTCCACCAGTGCTGCCCTCCTGA...TGGCCTGGGGTTGTTCCATAATGAAGACTCAAGAAGACTGTTTCCCCACCACAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023478.8 |
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| CDS-3UTR TCA 90 bp | CCTTGCCTGAAGGCGGTCCATTTATTCTCTTCTGAACATGGTTTCCTCAGTCATTCTGGGCAGGCACCATaGCAGGCACTGCACCGATGC | + |
|
Preference number: 4 (lower is better) Translates to: PCLKAVHLFSSEHGFLSHSGQAP*QALHRC Trigger: GCATCGGTGCAGTGCCTGTCATGGTGCCTGCCCAGA...ATGACTGAGGAAACCATGTTCAGAAGAGAATAAATGGACCGCCTTCAGGCAAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023478.8 ENSMUST00000114706.8 |
||
| CDS-3UTR CCA 90 bp | AAGAGGCAATTATCTTCCTCGGTACAAAAGGCATCAGGCGCTGTCCTCATTAACAATCCTACCCTCCCGTaGAACCGGAGGGCGCCGTCA | + |
|
Preference number: 4 (lower is better) Translates to: KRQLSSSVQKASGAVLINNPTLP*NRRAPS Trigger: TGACGGCGCCCTCCGGTTCCACGGGAGGGTAGGATT...GTTAATGAGGACAGCGCCTGATGCCTTTTGTACCGAGGAAGATAATTGCCTCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023478.8 |
||
| CDS-3UTR CCA 90 bp | CCTTGCCTGAAGGCGGTCCATTTATTCTCTTCTGAACATGGTTTCCTCAGTCATAATCCTACCCTCCCGTaGAACCGGAGGGCGCCGTCA | + |
|
Preference number: 4 (lower is better) Translates to: PCLKAVHLFSSEHGFLSHNPTLP*NRRAPS Trigger: TGACGGCGCCCTCCGGTTCCACGGGAGGGTAGGATT...ATGACTGAGGAAACCATGTTCAGAAGAGAATAAATGGACCGCCTTCAGGCAAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023478.8 ENSMUST00000114706.8 |
||
| CDS-3UTR CCA 90 bp | GCTAGTGTCATCAGAAGGAGTGGGAGAGGGAGACTAGGCCAGACCATGAGCTTGTGGGATCCTTGGATTTaGCATTGTGGAGCAGAAGGG | + |
|
Preference number: 4 (lower is better) Translates to: ASVIRRSGRGRLGQTMSLWDPWI*HCGAEG Trigger: CCCTTCTGCTCCACAATGCCAAATCCAAGGATCCCA...CAAGCTCATGGTCTGGCCTAGTCTCCCTCTCCCACTCCTTCTGATGACACTAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023478.8 |
||
| CDS-3UTR CCA 90 bp | GCTGGCAATGTAAAGGCCCCTCCCACCTGGCTCCAGCTGGTTCCACCCACTCAAGACTGTTGTAGGTATTaGAAGAGGTCAGCGTGTTAT | + |
|
Preference number: 4 (lower is better) Translates to: AGNVKAPPTWLQLVPPTQDCCRY*KRSACY Trigger: ATAACACGCTGACCTCTTCCAATACCTACAACAGTC...TTGAGTGGGTGGAACCAGCTGGAGCCAGGTGGGAGGGGCCTTTACATTGCCAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023478.8 |
||
| CDS-3UTR CCA 90 bp | GAGGCCACTCCCTGTGAGGACTGTGCCCATGGGACAGGGAAAGAAGGCAGGAAGTACCAGAGTCTTATGTaGACCCAAAACCAGATGGTT | + |
|
Preference number: 4 (lower is better) Translates to: EATPCEDCAHGTGKEGRKYQSLM*TQNQMV Trigger: AACCATCTGGTTTTGGGTCCACATAAGACTCTGGTA...CTTCCTGCCTTCTTTCCCTGTCCCATGGGCACAGTCCTCACAGGGAGTGGCCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023478.8 |
||
| CDS-3UTR TCA 90 bp | CCCCCTTGCCTGAAGGCGGTCCATTTATTCTCTTCTGAACATGGTTTCCTCAGTTTCCTGGGCAAGACCTaGGGTGATGACCCTCTGTTG | + |
|
Preference number: 4 (lower is better) Translates to: PPCLKAVHLFSSEHGFLSFLGKT*GDDPLL Trigger: CAACAGAGGGTCATCACCTCAGGTCTTGCCCAGGAA...ACTGAGGAAACCATGTTCAGAAGAGAATAAATGGACCGCCTTCAGGCAAGGGGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023478.8 ENSMUST00000114706.8 |
||
| CDS-3UTR GCA 90 bp | AATCGCACACCCAAATTTCCAGATGCTGAGCAGACCCCCAAGAGCACACAGGAACTGTTCGGGCTGGTTTaGATTGGAGAGGGGAATGAC | + |
|
Preference number: 4 (lower is better) Translates to: NRTPKFPDAEQTPKSTQELFGLV*IGEGND Trigger: GTCATTCCCCTCTCCAATGCAAACCAGCCCGAACAG...TTCCTGTGTGCTCTTGGGGGTCTGCTCAGCATCTGGAAATTTGGGTGTGCGATT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023478.8 |
||
| CDS-3UTR CCA 90 bp | AGGCCACTCCCTGTGAGGACTGTGCCCATGGGACAGGGAAAGAAGGCAGGAAGCGACTCTGTGTTTCTATaGGGTTTTGGATTGTTGTTC | + |
|
Preference number: 4 (lower is better) Translates to: RPLPVRTVPMGQGKKAGSDSVFL*GFGLLF Trigger: GAACAACAATCCAAAACCCCATAGAAACACAGAGTC...GCTTCCTGCCTTCTTTCCCTGTCCCATGGGCACAGTCCTCACAGGGAGTGGCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023478.8 |
||
| CDS-3UTR GCA 90 bp | CCCCCTTGCCTGAAGGCGGTCCATTTATTCTCTTCTGAACATGGTTTCCTCAGTCTGTTCGGGCTGGTTTaGATTGGAGAGGGGAATGAC | + |
|
Preference number: 4 (lower is better) Translates to: PPCLKAVHLFSSEHGFLSLFGLV*IGEGND Trigger: GTCATTCCCCTCTCCAATGCAAACCAGCCCGAACAG...ACTGAGGAAACCATGTTCAGAAGAGAATAAATGGACCGCCTTCAGGCAAGGGGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023478.8 ENSMUST00000114706.8 |
||
| CDS-3UTR CCA 90 bp | CCCCCTTGCCTGAAGGCGGTCCATTTATTCTCTTCTGAACATGGTTTCCTCAGTATGACCTGTTCGGGCTaGTTTGCATTGGAGAGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: PPCLKAVHLFSSEHGFLSMTCSG*FALERG Trigger: TCCCCTCTCCAATGCAAACCAGCCCGAACAGGTCAT...ACTGAGGAAACCATGTTCAGAAGAGAATAAATGGACCGCCTTCAGGCAAGGGGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023478.8 ENSMUST00000114706.8 |
||
| 3UTR CAA 72 bp | AGGAGTGGGAGAGGGAGACTAGGCCAGACCATGAGCTaGCTCCTGTTTTCTCTCCCTAAGGACACCTATTTT | + |
|
Preference number: 4 (lower is better) Translates to: RSGRGRLGQTMS*LLFSLPKDTYF Trigger: AAAATAGGTGTCCTTAGGGAGAGAAAACAGGAGCAAGCTCATGGTCTGGCCTAGTCTCCCTCTCCCACTCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023478.8 |
||
| 3UTR CAA 72 bp | TCCTCATTAACGGTTGCCATACACAATCTCAATTCTTaGGGGCCCTGCTGGCAATGTAAAGGCCCCTCCCAC | + |
|
Preference number: 4 (lower is better) Translates to: SSLTVAIHNLNS*GPCWQCKGPSH Trigger: GTGGGAGGGGCCTTTACATTGCCAGCAGGGCCCCAAAGAATTGAGATTGTGTATGGCAACCGTTAATGAGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023478.8 |
||
| CDS-3UTR CCA 90 bp | CCCCCTTGCCTGAAGGCGGTCCATTTATTCTCTTCTGAACATGGTTTCCTCAGTTGGGATCCTTGGATTTaGCATTGTGGAGCAGAAGGG | + |
|
Preference number: 4 (lower is better) Translates to: PPCLKAVHLFSSEHGFLSWDPWI*HCGAEG Trigger: CCCTTCTGCTCCACAATGCCAAATCCAAGGATCCCA...ACTGAGGAAACCATGTTCAGAAGAGAATAAATGGACCGCCTTCAGGCAAGGGGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023478.8 ENSMUST00000114706.8 |
||
| CDS-3UTR CCA 90 bp | CGGTACAAAAGGCATCAGGCGCTGTCCTCATTAACGGTTGCCATACACAATCTCGAGGATATCTCCGTGTaGAAGGCTTTGGCAGAAGAG | + |
|
Preference number: 4 (lower is better) Translates to: RYKRHQALSSLTVAIHNLEDISV*KALAEE Trigger: CTCTTCTGCCAAAGCCTTCCACACGGAGATATCCTC...GAGATTGTGTATGGCAACCGTTAATGAGGACAGCGCCTGATGCCTTTTGTACCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023478.8 |
||
| 3UTR CAA 72 bp | GAAACGGTCACAGCAGTGACTTCCCGAGTGTCCCTTTaGAAAAAGGTATGTGCAGCCAGTGATGGCTTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: ETVTAVTSRVSL*KKVCAASDGFH Trigger: ATGGAAGCCATCACTGGCTGCACATACCTTTTTCAAAAGGGACACTCGGGAAGTCACTGCTGTGACCGTTTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023478.8 |
||
| CDS-3UTR GCA 90 bp | GCTAATGGAATCGTAACAAAAGTTTATTTTTCAGCACTCACCCATCCCACTCTCCTATACCAGGGACCCTaGTCGACTCTGGGCAGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: ANGIVTKVYFSALTHPTLLYQGP*STLGRH Trigger: GTGCCTGCCCAGAGTCGAGCAGGGTCCCTGGTATAG...GAGAGTGGGATGGGTGAGTGCTGAAAAATAAACTTTTGTTACGATTCCATTAGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023478.8 ENSMUST00000114706.8 |
||
| CDS-3UTR CCA 90 bp | CCTTGCCTGAAGGCGGTCCATTTATTCTCTTCTGAACATGGTTTCCTCAGTCATATGACCTGTTCGGGCTaGTTTGCATTGGAGAGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: PCLKAVHLFSSEHGFLSHMTCSG*FALERG Trigger: TCCCCTCTCCAATGCAAACCAGCCCGAACAGGTCAT...ATGACTGAGGAAACCATGTTCAGAAGAGAATAAATGGACCGCCTTCAGGCAAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023478.8 ENSMUST00000114706.8 |
||
| CDS-3UTR CCA 90 bp | GCTAGTGTCATCAGAAGGAGTGGGAGAGGGAGACTAGGCCAGACCATGAGCTTGGTTTCTATGGGGTTTTaGATTGTTGTTCCAGTATCG | + |
|
Preference number: 4 (lower is better) Translates to: ASVIRRSGRGRLGQTMSLVSMGF*IVVPVS Trigger: CGATACTGGAACAACAATCCAAAACCCCATAGAAAC...CAAGCTCATGGTCTGGCCTAGTCTCCCTCTCCCACTCCTTCTGATGACACTAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023478.8 |
||
| CDS-3UTR CCA 90 bp | CCCCCTTGCCTGAAGGCGGTCCATTTATTCTCTTCTGAACATGGTTTCCTCAGTTTGCCAGAGAAAGACTaGCGTAAGTCACTGAAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: PPCLKAVHLFSSEHGFLSLPEKD*RKSLKW Trigger: CCACTTCAGTGACTTACGCCAGTCTTTCTCTGGCAA...ACTGAGGAAACCATGTTCAGAAGAGAATAAATGGACCGCCTTCAGGCAAGGGGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023478.8 ENSMUST00000114706.8 |
||
| 3UTR CAA 72 bp | GAATCTCAGGACATCTGTGGTGGGGAAACAGTCTTCTaGAGTCTTCATTATGGAACAACCCCAGGCCACTTC | + |
|
Preference number: 4 (lower is better) Translates to: ESQDICGGETVF*SLHYGTTPGHF Trigger: GAAGTGGCCTGGGGTTGTTCCATAATGAAGACTCAAGAAGACTGTTTCCCCACCACAGATGTCCTGAGATTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023478.8 |
||
| CDS-3UTR TCA 90 bp | CCTTGCCTGAAGGCGGTCCATTTATTCTCTTCTGAACATGGTTTCCTCAGTCATCACCCTGATAAAGAATaGCCTGTTCGGGCTGGTTTG | + |
|
Preference number: 4 (lower is better) Translates to: PCLKAVHLFSSEHGFLSHHPDKE*PVRAGL Trigger: CAAACCAGCCCGAACAGGTCATTCTTTATCAGGGTG...ATGACTGAGGAAACCATGTTCAGAAGAGAATAAATGGACCGCCTTCAGGCAAGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023478.8 ENSMUST00000114706.8 |
||
| CDS-3UTR TCA 90 bp | AATCGCACACCCAAATTTCCAGATGCTGAGCAGACCCCCAAGAGCACACAGGAACTGTTGGAGGTAGCTTaGGCGTATTATCTAACTTCT | + |
|
Preference number: 4 (lower is better) Translates to: NRTPKFPDAEQTPKSTQELLEVA*AYYLTS Trigger: AGAAGTTAGATAATACGCTCAAGCTACCTCCAACAG...TTCCTGTGTGCTCTTGGGGGTCTGCTCAGCATCTGGAAATTTGGGTGTGCGATT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023478.8 |
||
| CDS-3UTR TCA 90 bp | ATGAGAATCTGTCAATATAGCAAAATCACCAATACGATTCATGGTTCAGGAGGATCTGGGCAGGCACCATaGCAGGCACTGCACCGATGC | + |
|
Preference number: 4 (lower is better) Translates to: MRICQYSKITNTIHGSGGSGQAP*QALHRC Trigger: GCATCGGTGCAGTGCCTGTCATGGTGCCTGCCCAGA...TCCTCCTGAACCATGAATCGTATTGGTGATTTTGCTATATTGACAGATTCTCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023478.8 |
||
| CDS-3UTR CCA 90 bp | GCTAATGGAATCGTAACAAAAGTTTATTTTTCAGCACTCACCCATCCCACTCTCTCTCCCAAAGGTACGTaGGCCGAGGGATGCCTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: ANGIVTKVYFSALTHPTLSPKGT*AEGCLP Trigger: AGGAAGGCATCCCTCGGCCCACGTACCTTTGGGAGA...GAGAGTGGGATGGGTGAGTGCTGAAAAATAAACTTTTGTTACGATTCCATTAGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023478.8 ENSMUST00000114706.8 |
||
| CDS-3UTR CCA 90 bp | AACATCGAAACGGTCACAGCAGTGACTTCCCGAGTGTCCCTTTTGAAAAAGGTATTAGAAGCCACACACTaGTACAGACCGGAAGAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: NIETVTAVTSRVSLLKKVLEATH*YRPEER Trigger: CCTCTCTTCCGGTCTGTACCAGTGTGTGGCTTCTAA...TACCTTTTTCAAAAGGGACACTCGGGAAGTCACTGCTGTGACCGTTTCGATGTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023478.8 |
||
| CDS-3UTR TCA 90 bp | AAGAGGCAATTATCTTCCTCGGTACAAAAGGCATCAGGCGCTGTCCTCATTAACGTACGTGCCCGTATCTaGCAGCTGTGTGTTATTGAT | + |
|
Preference number: 4 (lower is better) Translates to: KRQLSSSVQKASGAVLINVRARI*QLCVID Trigger: ATCAATAACACACAGCTGTCAGATACGGGCACGTAC...GTTAATGAGGACAGCGCCTGATGCCTTTTGTACCGAGGAAGATAATTGCCTCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023478.8 |
||
| CDS-3UTR TCA 90 bp | CCTTGCCTGAAGGCGGTCCATTTATTCTCTTCTGAACATGGTTTCCTCAGTCATGTACGTGCCCGTATCTaGCAGCTGTGTGTTATTGAT | + |
|
Preference number: 4 (lower is better) Translates to: PCLKAVHLFSSEHGFLSHVRARI*QLCVID Trigger: ATCAATAACACACAGCTGTCAGATACGGGCACGTAC...ATGACTGAGGAAACCATGTTCAGAAGAGAATAAATGGACCGCCTTCAGGCAAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023478.8 ENSMUST00000114706.8 |
||
| CDS-3UTR TCA 90 bp | CCCCCTTGCCTGAAGGCGGTCCATTTATTCTCTTCTGAACATGGTTTCCTCAGTCTGTTGGAGGTAGCTTaGGCGTATTATCTAACTTCT | + |
|
Preference number: 4 (lower is better) Translates to: PPCLKAVHLFSSEHGFLSLLEVA*AYYLTS Trigger: AGAAGTTAGATAATACGCTCAAGCTACCTCCAACAG...ACTGAGGAAACCATGTTCAGAAGAGAATAAATGGACCGCCTTCAGGCAAGGGGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023478.8 ENSMUST00000114706.8 |
||
| CDS-3UTR CCA 90 bp | CCTTGCCTGAAGGCGGTCCATTTATTCTCTTCTGAACATGGTTTCCTCAGTCATTTGCCAGAGAAAGACTaGCGTAAGTCACTGAAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: PCLKAVHLFSSEHGFLSHLPEKD*RKSLKW Trigger: CCACTTCAGTGACTTACGCCAGTCTTTCTCTGGCAA...ATGACTGAGGAAACCATGTTCAGAAGAGAATAAATGGACCGCCTTCAGGCAAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023478.8 ENSMUST00000114706.8 |
||
| CDS-3UTR CCA 90 bp | CCCCCTTGCCTGAAGGCGGTCCATTTATTCTCTTCTGAACATGGTTTCCTCAGTTACCAGAGTCTTATGTaGACCCAAAACCAGATGGTT | + |
|
Preference number: 4 (lower is better) Translates to: PPCLKAVHLFSSEHGFLSYQSLM*TQNQMV Trigger: AACCATCTGGTTTTGGGTCCACATAAGACTCTGGTA...ACTGAGGAAACCATGTTCAGAAGAGAATAAATGGACCGCCTTCAGGCAAGGGGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023478.8 ENSMUST00000114706.8 |
||
| CDS-3UTR TCA 90 bp | GCTAATGGAATCGTAACAAAAGTTTATTTTTCAGCACTCACCCATCCCACTCTCAGGCTTCCTGCTGACTaGACCATTGTTCCTGGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: ANGIVTKVYFSALTHPTLRLPAD*TIVPGQ Trigger: TTGCCCAGGAACAATGGTTCAGTCAGCAGGAAGCCT...GAGAGTGGGATGGGTGAGTGCTGAAAAATAAACTTTTGTTACGATTCCATTAGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023478.8 ENSMUST00000114706.8 |
||
| CDS-3UTR CCA 90 bp | GCTAATGGAATCGTAACAAAAGTTTATTTTTCAGCACTCACCCATCCCACTCTCTCACTGCCGAGGTCCTaGGATCCTTGGATTTGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: ANGIVTKVYFSALTHPTLSLPRS*DPWIWH Trigger: ATGCCAAATCCAAGGATCCCAGGACCTCGGCAGTGA...GAGAGTGGGATGGGTGAGTGCTGAAAAATAAACTTTTGTTACGATTCCATTAGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023478.8 ENSMUST00000114706.8 |
||
| 3UTR CAA 72 bp | GGTAAGCTTTACTCTGCTTCTAGCATTCTCCTTGGCTaGGCACATCTCTGGAGATGCAGCATGTTTCGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: GKLYSASSILLG*AHLWRCSMFRF Trigger: AAAACGAAACATGCTGCATCTCCAGAGATGTGCCAAGCCAAGGAGAATGCTAGAAGCAGAGTAAAGCTTACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023478.8 |
||
| CDS-3UTR TCA 90 bp | GCTAATGGAATCGTAACAAAAGTTTATTTTTCAGCACTCACCCATCCCACTCTCAGGGATGCCTTCCTCTaGACTACACAGAAGGATGAC | + |
|
Preference number: 4 (lower is better) Translates to: ANGIVTKVYFSALTHPTLRDAFL*TTQKDD Trigger: GTCATCCTTCTGTGTAGTTCAGAGGAAGGCATCCCT...GAGAGTGGGATGGGTGAGTGCTGAAAAATAAACTTTTGTTACGATTCCATTAGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023478.8 ENSMUST00000114706.8 |
||
| CDS-3UTR CCA 90 bp | GCTAATGGAATCGTAACAAAAGTTTATTTTTCAGCACTCACCCATCCCACTCTCTTAGAAGCCACACACTaGTACAGACCGGAAGAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: ANGIVTKVYFSALTHPTLLEATH*YRPEER Trigger: CCTCTCTTCCGGTCTGTACCAGTGTGTGGCTTCTAA...GAGAGTGGGATGGGTGAGTGCTGAAAAATAAACTTTTGTTACGATTCCATTAGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023478.8 ENSMUST00000114706.8 |
||
| CDS-3UTR CCA 90 bp | GCTAATGGAATCGTAACAAAAGTTTATTTTTCAGCACTCACCCATCCCACTCTCGAGGATATCTCCGTGTaGAAGGCTTTGGCAGAAGAG | + |
|
Preference number: 4 (lower is better) Translates to: ANGIVTKVYFSALTHPTLEDISV*KALAEE Trigger: CTCTTCTGCCAAAGCCTTCCACACGGAGATATCCTC...GAGAGTGGGATGGGTGAGTGCTGAAAAATAAACTTTTGTTACGATTCCATTAGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023478.8 ENSMUST00000114706.8 |
||
| CDS-3UTR CCA 90 bp | CCTTGCCTGAAGGCGGTCCATTTATTCTCTTCTGAACATGGTTTCCTCAGTCATGACTCTGTGTTTCTATaGGGTTTTGGATTGTTGTTC | + |
|
Preference number: 4 (lower is better) Translates to: PCLKAVHLFSSEHGFLSHDSVFL*GFGLLF Trigger: GAACAACAATCCAAAACCCCATAGAAACACAGAGTC...ATGACTGAGGAAACCATGTTCAGAAGAGAATAAATGGACCGCCTTCAGGCAAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023478.8 ENSMUST00000114706.8 |
||
| CDS-3UTR CCA 90 bp | GCTAATGGAATCGTAACAAAAGTTTATTTTTCAGCACTCACCCATCCCACTCTCGACTGTTGTAGGTATTaGAAGAGGTCAGCGTGTTAT | + |
|
Preference number: 4 (lower is better) Translates to: ANGIVTKVYFSALTHPTLDCCRY*KRSACY Trigger: ATAACACGCTGACCTCTTCCAATACCTACAACAGTC...GAGAGTGGGATGGGTGAGTGCTGAAAAATAAACTTTTGTTACGATTCCATTAGC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023478.8 ENSMUST00000114706.8 |
||
| CDS-3UTR CCA 90 bp | GCTAATGGAATCGTAACAAAAGTTTATTTTTCAGCACTCACCCATCCCACTCTCGTTTCTATGGGGTTTTaGATTGTTGTTCCAGTATCG | + |
|
Preference number: 4 (lower is better) Translates to: ANGIVTKVYFSALTHPTLVSMGF*IVVPVS Trigger: CGATACTGGAACAACAATCCAAAACCCCATAGAAAC...GAGAGTGGGATGGGTGAGTGCTGAAAAATAAACTTTTGTTACGATTCCATTAGC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000023478.8 ENSMUST00000114706.8 |
||
| CDS CCA 90 bp | AGGAGGGCAGCACTGGTGGAGAAGGCGCAGGGCAGGACTGCTGTCTaGCCCCGGGCCACCTGGACACTGCCTGGGCTCTCGGACACTTCC | + |
|
Preference number: 5 (lower is better) Translates to: RRAALVEKAQGRTAV*PRATWTLPGLSDTS Trigger: GGAAGTGTCCGAGAGCCCAGGCAGTGTCCAGGTGGCCCGGGGCCAGACAGCAGTCCTGCCCTGCGCCTTCTCCACCAGTGCTGCCCTCCT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023478.8 |
||
| CDS GCA 90 bp | GGCCACCTGGACACTGCCTGGGCTCTCGGACACTTCCAGGGATGTTaGGACACCGAGCAGCGACACGAGCAGCCAGGACGCCGGAGCGGA | + |
|
Preference number: 5 (lower is better) Translates to: GHLDTAWALGHFQGC*DTEQRHEQPGRRSG Trigger: TCCGCTCCGGCGTCCTGGCTGCTCGTGTCGCTGCTCGGTGTCGCAACATCCCTGGAAGTGTCCGAGAGCCCAGGCAGTGTCCAGGTGGCC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023478.8 |
||
| CDS GCA 90 bp | AGGCGCAGGGCAGGACTGCTGTCTGGCCCCGGGCCACCTGGACACTaGCTGGGCTCTCGGACACTTCCAGGGATGTTGCGACACCGAGCA | + |
|
Preference number: 5 (lower is better) Translates to: RRRAGLLSGPGPPGH*LGSRTLPGMLRHRA Trigger: TGCTCGGTGTCGCAACATCCCTGGAAGTGTCCGAGAGCCCAGGCAGTGTCCAGGTGGCCCGGGGCCAGACAGCAGTCCTGCCCTGCGCCT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023478.8 |
||
| CDS CCA 90 bp | GCTCCGGCTATTACTCCAACGCTCCGGGGCTGGGGTGAGATAACCTaGAGGTCCAGCAGACAGGTGCTGGTCCCGATGGCATTAGAAGCC | + |
|
Preference number: 5 (lower is better) Translates to: APAITPTLRGWGEIT*RSSRQVLVPMALEA Trigger: GGCTTCTAATGCCATCGGGACCAGCACCTGTCTGCTGGACCTCCAGGTTATCTCACCCCAGCCCCGGAGCGTTGGAGTAATAGCCGGAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023478.8 ENSMUST00000114706.8 |
||
| CDS-3UTR CAA 90 bp | GAGAGGAGGCCACTCCCTGTGAGGACTGTGCCCATGGGACAGGGAAAGAAGGCAATGAAGATCGAGACATaGGTAGCAGGCATGGTGCCG | + |
|
Preference number: 5 (lower is better) Translates to: ERRPLPVRTVPMGQGKKAMKIET*VAGMVP Trigger: CGGCACCATGCCTGCTACCAATGTCTCGATCTTCAT...TGCCTTCTTTCCCTGTCCCATGGGCACAGTCCTCACAGGGAGTGGCCTCCTCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023478.8 |
||
| CDS TCA 90 bp | GGTACGTGGGCCGAGGGATGCCTTCCTCTGAACTACACAGAAGGATaGCGTCACTGCCGAGGTCCTGGGATCCTTGGATTTGGCATTGTG | + |
|
Preference number: 5 (lower is better) Translates to: GTWAEGCLPLNYTEG*RHCRGPGILGFGIV Trigger: CACAATGCCAAATCCAAGGATCCCAGGACCTCGGCAGTGACGTCATCCTTCTGTGTAGTTCAGAGGAAGGCATCCCTCGGCCCACGTACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023478.8 ENSMUST00000114706.8 |
||
| CDS CCA 90 bp | TCCAGCAGACAGGTGCTGGTCCCGATGGCATTAGAAGCCACACACTaGTACAGACCGGAAGAGAGGGCACTGATATTCCGGATGGTGACT | + |
|
Preference number: 5 (lower is better) Translates to: SSRQVLVPMALEATH*YRPEERALIFRMVT Trigger: AGTCACCATCCGGAATATCAGTGCCCTCTCTTCCGGTCTGTACCAGTGTGTGGCTTCTAATGCCATCGGGACCAGCACCTGTCTGCTGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023478.8 ENSMUST00000114706.8 |
||
| CDS TCA 90 bp | GGCTTACTGTGTAGGAATGAGTGTGTTGAGGCCAAGGCTTCCTGCTaGCTGAACCATTGTTCCTGGGCAAGACCTGAGGTGATGACCCTC | + |
|
Preference number: 5 (lower is better) Translates to: GLLCRNECVEAKASC*LNHCSWARPEVMTL Trigger: GAGGGTCATCACCTCAGGTCTTGCCCAGGAACAATGGTTCAGTCAGCAGGAAGCCTTGGCCTCAACACACTCATTCCTACACAGTAAGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023478.8 ENSMUST00000114706.8 |
||
| CDS-3UTR CAA 90 bp | CCCCCTTGCCTGAAGGCGGTCCATTTATTCTCTTCTGAACATGGTTTCCTCAGTTCGGGCTGGTTTGCATaGGAGAGGGGAATGACCATC | + |
|
Preference number: 5 (lower is better) Translates to: PPCLKAVHLFSSEHGFLSSGWFA*ERGMTI Trigger: GATGGTCATTCCCCTCTCCAATGCAAACCAGCCCGA...ACTGAGGAAACCATGTTCAGAAGAGAATAAATGGACCGCCTTCAGGCAAGGGGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023478.8 |
||
| CDS-3UTR CAA 90 bp | CCCCCTTGCCTGAAGGCGGTCCATTTATTCTCTTCTGAACATGGTTTCCTCAGTCTGGGATCCTTGGATTaGGCATTGTGGAGCAGAAGG | + |
|
Preference number: 5 (lower is better) Translates to: PPCLKAVHLFSSEHGFLSLGSLD*ALWSRR Trigger: CCTTCTGCTCCACAATGCCAAATCCAAGGATCCCAG...ACTGAGGAAACCATGTTCAGAAGAGAATAAATGGACCGCCTTCAGGCAAGGGGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023478.8 ENSMUST00000114706.8 |
||
| CDS-3UTR CAA 90 bp | CCCCCTTGCCTGAAGGCGGTCCATTTATTCTCTTCTGAACATGGTTTCCTCAGTGTAGGAATGAGTGTGTaGAGGCCAAGGCTTCCTGCT | + |
|
Preference number: 5 (lower is better) Translates to: PPCLKAVHLFSSEHGFLSVGMSV*RPRLPA Trigger: AGCAGGAAGCCTTGGCCTCAACACACTCATTCCTAC...ACTGAGGAAACCATGTTCAGAAGAGAATAAATGGACCGCCTTCAGGCAAGGGGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023478.8 ENSMUST00000114706.8 |
||
| CDS CCA 90 bp | CCGATGTTTCTGCCCCCTCTGTCTGGAAGGTTATTCACCAAGCACTaGTACGTGCCCGTATCTGACAGCTGTGTGTTATTGATGAAGATC | + |
|
Preference number: 5 (lower is better) Translates to: PMFLPPLSGRLFTKH*YVPVSDSCVLLMKI Trigger: GATCTTCATCAATAACACACAGCTGTCAGATACGGGCACGTACCAGTGCTTGGTGAATAACCTTCCAGACAGAGGGGGCAGAAACATCGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023478.8 ENSMUST00000114706.8 |
||
| CDS-3UTR CAA 90 bp | CCCCCTTGCCTGAAGGCGGTCCATTTATTCTCTTCTGAACATGGTTTCCTCAGTGATGGGATAACTGCATaGCCAGAGAAAGACTGGCGT | + |
|
Preference number: 5 (lower is better) Translates to: PPCLKAVHLFSSEHGFLSDGITA*PEKDWR Trigger: ACGCCAGTCTTTCTCTGGCAATGCAGTTATCCCATC...ACTGAGGAAACCATGTTCAGAAGAGAATAAATGGACCGCCTTCAGGCAAGGGGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023478.8 ENSMUST00000114706.8 |
||
| CDS-3UTR CAA 90 bp | CCCCCTTGCCTGAAGGCGGTCCATTTATTCTCTTCTGAACATGGTTTCCTCAGTGGCGCCGTCAAACATTaGTCCACCCTGATAAAGAAT | + |
|
Preference number: 5 (lower is better) Translates to: PPCLKAVHLFSSEHGFLSGAVKH*STLIKN Trigger: ATTCTTTATCAGGGTGGACAAATGTTTGACGGCGCC...ACTGAGGAAACCATGTTCAGAAGAGAATAAATGGACCGCCTTCAGGCAAGGGGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023478.8 ENSMUST00000114706.8 |
||
| CDS-3UTR CAA 90 bp | CCTTGCCTGAAGGCGGTCCATTTATTCTCTTCTGAACATGGTTTCCTCAGTCATCTGGGATCCTTGGATTaGGCATTGTGGAGCAGAAGG | + |
|
Preference number: 5 (lower is better) Translates to: PCLKAVHLFSSEHGFLSHLGSLD*ALWSRR Trigger: CCTTCTGCTCCACAATGCCAAATCCAAGGATCCCAG...ATGACTGAGGAAACCATGTTCAGAAGAGAATAAATGGACCGCCTTCAGGCAAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023478.8 ENSMUST00000114706.8 |
||
| CDS-3UTR CAA 90 bp | AAGAGGCAATTATCTTCCTCGGTACAAAAGGCATCAGGCGCTGTCCTCATTAACTCCGTGTGGAAGGCTTaGGCAGAAGAGCATTTAGGG | + |
|
Preference number: 5 (lower is better) Translates to: KRQLSSSVQKASGAVLINSVWKA*AEEHLG Trigger: CCCTAAATGCTCTTCTGCCAAAGCCTTCCACACGGA...GTTAATGAGGACAGCGCCTGATGCCTTTTGTACCGAGGAAGATAATTGCCTCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023478.8 |
||
| CDS TCA 90 bp | TCTGTCTGGAAGGTTATTCACCAAGCACTGGTACGTGCCCGTATCTaGCAGCTGTGTGTTATTGATGAAGATCGAGACATTGGTAGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: SVWKVIHQALVRARI*QLCVIDEDRDIGSR Trigger: CCTGCTACCAATGTCTCGATCTTCATCAATAACACACAGCTGTCAGATACGGGCACGTACCAGTGCTTGGTGAATAACCTTCCAGACAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023478.8 ENSMUST00000114706.8 |
||
| CDS CCA 90 bp | TTGGAAGAGGTCAGCGTGTTATTTTCTGAGGAGGATATCTCCGTGTaGAAGGCTTTGGCAGAAGAGCATTTAGGGGGAAGATCATCCTCT | + |
|
Preference number: 5 (lower is better) Translates to: LEEVSVLFSEEDISV*KALAEEHLGGRSSS Trigger: AGAGGATGATCTTCCCCCTAAATGCTCTTCTGCCAAAGCCTTCCACACGGAGATATCCTCCTCAGAAAATAACACGCTGACCTCTTCCAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023478.8 ENSMUST00000114706.8 |
||
| CDS-3UTR CAA 90 bp | AAGAGGCAATTATCTTCCTCGGTACAAAAGGCATCAGGCGCTGTCCTCATTAACACCATCCAAATGACATaGAGGTTCAGGAGGGCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: KRQLSSSVQKASGAVLINTIQMT*RFRRAA Trigger: TGCTGCCCTCCTGAACCTCAATGTCATTTGGATGGT...GTTAATGAGGACAGCGCCTGATGCCTTTTGTACCGAGGAAGATAATTGCCTCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023478.8 |
||
| CDS-3UTR CAA 90 bp | CGGTACAAAAGGCATCAGGCGCTGTCCTCATTAACGGTTGCCATACACAATCTCGCTGTTGGAGGTAGCTaGAGCGTATTATCTAACTTC | + |
|
Preference number: 5 (lower is better) Translates to: RYKRHQALSSLTVAIHNLAVGGS*SVLSNF Trigger: GAAGTTAGATAATACGCTCAAGCTACCTCCAACAGC...GAGATTGTGTATGGCAACCGTTAATGAGGACAGCGCCTGATGCCTTTTGTACCG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023478.8 |
||
| CDS-3UTR CAA 90 bp | CCCCCTTGCCTGAAGGCGGTCCATTTATTCTCTTCTGAACATGGTTTCCTCAGTGCTGTTGGAGGTAGCTaGAGCGTATTATCTAACTTC | + |
|
Preference number: 5 (lower is better) Translates to: PPCLKAVHLFSSEHGFLSAVGGS*SVLSNF Trigger: GAAGTTAGATAATACGCTCAAGCTACCTCCAACAGC...ACTGAGGAAACCATGTTCAGAAGAGAATAAATGGACCGCCTTCAGGCAAGGGGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023478.8 ENSMUST00000114706.8 |
||
| CDS-3UTR CAA 90 bp | CCCCCTTGCCTGAAGGCGGTCCATTTATTCTCTTCTGAACATGGTTTCCTCAGTCTATGGGGTTTTGGATaGTTGTTCCAGTATCGACTG | + |
|
Preference number: 5 (lower is better) Translates to: PPCLKAVHLFSSEHGFLSLWGFG*LFQYRL Trigger: CAGTCGATACTGGAACAACAATCCAAAACCCCATAG...ACTGAGGAAACCATGTTCAGAAGAGAATAAATGGACCGCCTTCAGGCAAGGGGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000023478.8 ENSMUST00000114706.8 |
||
| CDS-3UTR CAA 90 bp | AACATCGAAACGGTCACAGCAGTGACTTCCCGAGTGTCCCTTTTGAAAAAGGTAGATGGGATAACTGCATaGCCAGAGAAAGACTGGCGT | + |
|
Preference number: 5 (lower is better) Translates to: NIETVTAVTSRVSLLKKVDGITA*PEKDWR Trigger: ACGCCAGTCTTTCTCTGGCAATGCAGTTATCCCATC...TACCTTTTTCAAAAGGGACACTCGGGAAGTCACTGCTGTGACCGTTTCGATGTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023478.8 |
||
| CDS-3UTR CAA 90 bp | CCTTGCCTGAAGGCGGTCCATTTATTCTCTTCTGAACATGGTTTCCTCAGTCATGGCGCCGTCAAACATTaGTCCACCCTGATAAAGAAT | + |
|
Preference number: 5 (lower is better) Translates to: PCLKAVHLFSSEHGFLSHGAVKH*STLIKN Trigger: ATTCTTTATCAGGGTGGACAAATGTTTGACGGCGCC...ATGACTGAGGAAACCATGTTCAGAAGAGAATAAATGGACCGCCTTCAGGCAAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023478.8 ENSMUST00000114706.8 |
||
| CDS TCA 90 bp | GTATCGACTGTTGTAGGTATTGGAAGAGGTCAGCGTGTTATTTTCTaGGGAGGATATCTCCGTGTGGAAGGCTTTGGCAGAAGAGCATTT | + |
|
Preference number: 5 (lower is better) Translates to: VSTVVGIGRGQRVIF*GGYLRVEGFGRRAF Trigger: AAATGCTCTTCTGCCAAAGCCTTCCACACGGAGATATCCTCCTCAGAAAATAACACGCTGACCTCTTCCAATACCTACAACAGTCGATAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023478.8 ENSMUST00000114706.8 |
||
| CDS-3UTR CAA 90 bp | GCTAATGGAATCGTAACAAAAGTTTATTTTTCAGCACTCACCCATCCCACTCTCTCCGTGTGGAAGGCTTaGGCAGAAGAGCATTTAGGG | + |
|
Preference number: 5 (lower is better) Translates to: ANGIVTKVYFSALTHPTLSVWKA*AEEHLG Trigger: CCCTAAATGCTCTTCTGCCAAAGCCTTCCACACGGA...GAGAGTGGGATGGGTGAGTGCTGAAAAATAAACTTTTGTTACGATTCCATTAGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023478.8 ENSMUST00000114706.8 |
||
| CDS-3UTR CAA 90 bp | AAGAGGCAATTATCTTCCTCGGTACAAAAGGCATCAGGCGCTGTCCTCATTAACTGGGGTTTTGGATTGTaGTTCCAGTATCGACTGTTG | + |
|
Preference number: 5 (lower is better) Translates to: KRQLSSSVQKASGAVLINWGFGL*FQYRLL Trigger: CAACAGTCGATACTGGAACAACAATCCAAAACCCCA...GTTAATGAGGACAGCGCCTGATGCCTTTTGTACCGAGGAAGATAATTGCCTCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000023478.8 |
||
| CDS-3UTR CAA 90 bp | CCTTGCCTGAAGGCGGTCCATTTATTCTCTTCTGAACATGGTTTCCTCAGTCATCTATGGGGTTTTGGATaGTTGTTCCAGTATCGACTG | + |
|
Preference number: 5 (lower is better) Translates to: PCLKAVHLFSSEHGFLSHLWGFG*LFQYRL Trigger: CAGTCGATACTGGAACAACAATCCAAAACCCCATAG...ATGACTGAGGAAACCATGTTCAGAAGAGAATAAATGGACCGCCTTCAGGCAAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023478.8 ENSMUST00000114706.8 |
||
| CDS-3UTR CAA 90 bp | CCCCCTTGCCTGAAGGCGGTCCATTTATTCTCTTCTGAACATGGTTTCCTCAGTTGTTTCTATGGGGTTTaGGATTGTTGTTCCAGTATC | + |
|
Preference number: 5 (lower is better) Translates to: PPCLKAVHLFSSEHGFLSCFYGV*DCCSSI Trigger: GATACTGGAACAACAATCCAAAACCCCATAGAAACA...ACTGAGGAAACCATGTTCAGAAGAGAATAAATGGACCGCCTTCAGGCAAGGGGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023478.8 ENSMUST00000114706.8 |
||
| CDS-3UTR CAA 90 bp | GCTAATGGAATCGTAACAAAAGTTTATTTTTCAGCACTCACCCATCCCACTCTCGCGCTCCAGGGTCATTaGGCTTACTGTGTAGGAATG | + |
|
Preference number: 5 (lower is better) Translates to: ANGIVTKVYFSALTHPTLALQGH*AYCVGM Trigger: CATTCCTACACAGTAAGCCAAATGACCCTGGAGCGC...GAGAGTGGGATGGGTGAGTGCTGAAAAATAAACTTTTGTTACGATTCCATTAGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023478.8 ENSMUST00000114706.8 |
||
| CDS-3UTR CAA 90 bp | CAGATGAGAATCTGTCAATATAGCAAAATCACCAATACGATTCATGGTTCAGGAGTAGGAATGAGTGTGTaGAGGCCAAGGCTTCCTGCT | + |
|
Preference number: 5 (lower is better) Translates to: QMRICQYSKITNTIHGSGVGMSV*RPRLPA Trigger: AGCAGGAAGCCTTGGCCTCAACACACTCATTCCTAC...TCCTGAACCATGAATCGTATTGGTGATTTTGCTATATTGACAGATTCTCATCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023478.8 |
||
| CDS-3UTR CAA 90 bp | GCTAATGGAATCGTAACAAAAGTTTATTTTTCAGCACTCACCCATCCCACTCTCTGGGGTTTTGGATTGTaGTTCCAGTATCGACTGTTG | + |
|
Preference number: 5 (lower is better) Translates to: ANGIVTKVYFSALTHPTLWGFGL*FQYRLL Trigger: CAACAGTCGATACTGGAACAACAATCCAAAACCCCA...GAGAGTGGGATGGGTGAGTGCTGAAAAATAAACTTTTGTTACGATTCCATTAGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000023478.8 ENSMUST00000114706.8 |
||
| CDS-3UTR CAA 90 bp | CAGATGAGAATCTGTCAATATAGCAAAATCACCAATACGATTCATGGTTCAGGATGTTTCTATGGGGTTTaGGATTGTTGTTCCAGTATC | + |
|
Preference number: 5 (lower is better) Translates to: QMRICQYSKITNTIHGSGCFYGV*DCCSSI Trigger: GATACTGGAACAACAATCCAAAACCCCATAGAAACA...TCCTGAACCATGAATCGTATTGGTGATTTTGCTATATTGACAGATTCTCATCTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023478.8 |
||
| CDS CAA 90 bp | GGGCCACCTGGACACTGCCTGGGCTCTCGGACACTTCCAGGGATGTaGCGACACCGAGCAGCGACACGAGCAGCCAGGACGCCGGAGCGG | + |
|
Preference number: 6 (lower is better) Translates to: GPPGHCLGSRTLPGM*RHRAATRAARTPER Trigger: CCGCTCCGGCGTCCTGGCTGCTCGTGTCGCTGCTCGGTGTCGCAACATCCCTGGAAGTGTCCGAGAGCCCAGGCAGTGTCCAGGTGGCCC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023478.8 |
||
| CDS GCA 72 bp | GCAGGACTGCTGTCTGGCCCCGGGCCACCTGGACACTaGCTGGGCTCTCGGACACTTCCAGGGATGTTGCGA | + |
|
Preference number: 6 (lower is better) Translates to: AGLLSGPGPPGH*LGSRTLPGMLR Trigger: TCGCAACATCCCTGGAAGTGTCCGAGAGCCCAGGCAGTGTCCAGGTGGCCCGGGGCCAGACAGCAGTCCTGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023478.8 |
||
| CDS GCA 72 bp | GACACTGCCTGGGCTCTCGGACACTTCCAGGGATGTTaGGACACCGAGCAGCGACACGAGCAGCCAGGACGC | + |
|
Preference number: 6 (lower is better) Translates to: DTAWALGHFQGC*DTEQRHEQPGR Trigger: GCGTCCTGGCTGCTCGTGTCGCTGCTCGGTGTCGCAACATCCCTGGAAGTGTCCGAGAGCCCAGGCAGTGTC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023478.8 |
||
| CDS CAA 72 bp | GGACACTGCCTGGGCTCTCGGACACTTCCAGGGATGTaGCGACACCGAGCAGCGACACGAGCAGCCAGGACG | + |
|
Preference number: 6 (lower is better) Translates to: GHCLGSRTLPGM*RHRAATRAART Trigger: CGTCCTGGCTGCTCGTGTCGCTGCTCGGTGTCGCAACATCCCTGGAAGTGTCCGAGAGCCCAGGCAGTGTCC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023478.8 |
||
| CDS TCA 72 bp | CGCTCCGGCTATTACTCCAACGCTCCGGGGCTGGGGTaGGATAACCTGGAGGTCCAGCAGACAGGTGCTGGT | + |
|
Preference number: 6 (lower is better) Translates to: RSGYYSNAPGLG*DNLEVQQTGAG Trigger: ACCAGCACCTGTCTGCTGGACCTCCAGGTTATCTCACCCCAGCCCCGGAGCGTTGGAGTAATAGCCGGAGCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023478.8 ENSMUST00000114706.8 |
||
| CDS CCA 72 bp | CCAACCGCTCCGGCTATTACTCCAACGCTCCGGGGCTaGGGTGAGATAACCTGGAGGTCCAGCAGACAGGTG | + |
|
Preference number: 6 (lower is better) Translates to: PTAPAITPTLRG*GEITWRSSRQV Trigger: CACCTGTCTGCTGGACCTCCAGGTTATCTCACCCCAGCCCCGGAGCGTTGGAGTAATAGCCGGAGCGGTTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023478.8 ENSMUST00000114706.8 |
||
| CDS CCA 72 bp | GTAGCAGGCATGGTGCCGGTAAATCCTACCCTCCCGTaGAACCGGAGGGCGCCGTCAAACATTTGTCCACCC | + |
|
Preference number: 6 (lower is better) Translates to: VAGMVPVNPTLP*NRRAPSNICPP Trigger: GGGTGGACAAATGTTTGACGGCGCCCTCCGGTTCCACGGGAGGGTAGGATTTACCGGCACCATGCCTGCTAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023478.8 ENSMUST00000114706.8 |
||
| CDS CCA 72 bp | ATTACTCCAACGCTCCGGGGCTGGGGTGAGATAACCTaGAGGTCCAGCAGACAGGTGCTGGTCCCGATGGCA | + |
|
Preference number: 6 (lower is better) Translates to: ITPTLRGWGEIT*RSSRQVLVPMA Trigger: TGCCATCGGGACCAGCACCTGTCTGCTGGACCTCCAGGTTATCTCACCCCAGCCCCGGAGCGTTGGAGTAAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023478.8 ENSMUST00000114706.8 |
||
| CDS TCA 72 bp | CTCCCAAAGGTACGTGGGCCGAGGGATGCCTTCCTCTaGACTACACAGAAGGATGACGTCACTGCCGAGGTC | + |
|
Preference number: 6 (lower is better) Translates to: LPKVRGPRDAFL*TTQKDDVTAEV Trigger: GACCTCGGCAGTGACGTCATCCTTCTGTGTAGTTCAGAGGAAGGCATCCCTCGGCCCACGTACCTTTGGGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023478.8 ENSMUST00000114706.8 |
||
| CDS CCA 72 bp | CAGGTGCTGGTCCCGATGGCATTAGAAGCCACACACTaGTACAGACCGGAAGAGAGGGCACTGATATTCCGG | + |
|
Preference number: 6 (lower is better) Translates to: QVLVPMALEATH*YRPEERALIFR Trigger: CCGGAATATCAGTGCCCTCTCTTCCGGTCTGTACCAGTGTGTGGCTTCTAATGCCATCGGGACCAGCACCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023478.8 ENSMUST00000114706.8 |
||
| CDS CAA 72 bp | TACCCTCCCGTGGAACCGGAGGGCGCCGTCAAACATTaGTCCACCCTGATAAAGAATGACCTGTTCGGGCTG | + |
|
Preference number: 6 (lower is better) Translates to: YPPVEPEGAVKH*STLIKNDLFGL Trigger: CAGCCCGAACAGGTCATTCTTTATCAGGGTGGACAAATGTTTGACGGCGCCCTCCGGTTCCACGGGAGGGTA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023478.8 ENSMUST00000114706.8 |
||
| CDS CCA 72 bp | GAACTACACAGAAGGATGACGTCACTGCCGAGGTCCTaGGATCCTTGGATTTGGCATTGTGGAGCAGAAGGG | + |
|
Preference number: 6 (lower is better) Translates to: ELHRRMTSLPRS*DPWIWHCGAEG Trigger: CCCTTCTGCTCCACAATGCCAAATCCAAGGATCCCAGGACCTCGGCAGTGACGTCATCCTTCTGTGTAGTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023478.8 ENSMUST00000114706.8 |
||
| CDS CAA 72 bp | CATGACAGGCACTGCACCGATGCGCTCCAGGGTCATTaGGCTTACTGTGTAGGAATGAGTGTGTTGAGGCCA | + |
|
Preference number: 6 (lower is better) Translates to: HDRHCTDALQGH*AYCVGMSVLRP Trigger: TGGCCTCAACACACTCATTCCTACACAGTAAGCCAAATGACCCTGGAGCGCATCGGTGCAGTGCCTGTCATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023478.8 ENSMUST00000114706.8 |
||
| CDS CAA 90 bp | GGTAAATCCTACCCTCCCGTGGAACCGGAGGGCGCCGTCAAACATTaGTCCACCCTGATAAAGAATGACCTGTTCGGGCTGGTTTGCATT | + |
|
Preference number: 6 (lower is better) Translates to: GKSYPPVEPEGAVKH*STLIKNDLFGLVCI Trigger: AATGCAAACCAGCCCGAACAGGTCATTCTTTATCAGGGTGGACAAATGTTTGACGGCGCCCTCCGGTTCCACGGGAGGGTAGGATTTACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023478.8 ENSMUST00000114706.8 |
||
| CDS TCA 72 bp | CCTGGACCTGGTCCTGAGTGGCTGTTGGAGGTAGCTTaGGCGTATTATCTAACTTCTCCCAAAGGTACGTGG | + |
|
Preference number: 6 (lower is better) Translates to: PGPGPEWLLEVA*AYYLTSPKGTW Trigger: CCACGTACCTTTGGGAGAAGTTAGATAATACGCTCAAGCTACCTCCAACAGCCACTCAGGACCAGGTCCAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023478.8 ENSMUST00000114706.8 |
||
| CDS TCA 72 bp | TGTAGGAATGAGTGTGTTGAGGCCAAGGCTTCCTGCTaGCTGAACCATTGTTCCTGGGCAAGACCTGAGGTG | + |
|
Preference number: 6 (lower is better) Translates to: CRNECVEAKASC*LNHCSWARPEV Trigger: CACCTCAGGTCTTGCCCAGGAACAATGGTTCAGTCAGCAGGAAGCCTTGGCCTCAACACACTCATTCCTACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023478.8 ENSMUST00000114706.8 |
||
| CDS CCA 72 bp | CTGCCCCCTCTGTCTGGAAGGTTATTCACCAAGCACTaGTACGTGCCCGTATCTGACAGCTGTGTGTTATTG | + |
|
Preference number: 6 (lower is better) Translates to: LPPLSGRLFTKH*YVPVSDSCVLL Trigger: CAATAACACACAGCTGTCAGATACGGGCACGTACCAGTGCTTGGTGAATAACCTTCCAGACAGAGGGGGCAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023478.8 ENSMUST00000114706.8 |
||
| CDS CAA 72 bp | TTTGCATTGGAGAGGGGAATGACCATCCAAATGACATaGAGGTTCAGGAGGGCAGCACTGGTGGAGAAGGCG | + |
|
Preference number: 6 (lower is better) Translates to: FALERGMTIQMT*RFRRAALVEKA Trigger: CGCCTTCTCCACCAGTGCTGCCCTCCTGAACCTCAATGTCATTTGGATGGTCATTCCCCTCTCCAATGCAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023478.8 |
||
| CDS CAA 90 bp | GTGCCCGTATCTGACAGCTGTGTGTTATTGATGAAGATCGAGACATaGGTAGCAGGCATGGTGCCGGTAAATCCTACCCTCCCGTGGAAC | + |
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Preference number: 6 (lower is better) Translates to: VPVSDSCVLLMKIET*VAGMVPVNPTLPWN Trigger: GTTCCACGGGAGGGTAGGATTTACCGGCACCATGCCTGCTACCAATGTCTCGATCTTCATCAATAACACACAGCTGTCAGATACGGGCAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023478.8 ENSMUST00000114706.8 |
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| CDS TCA 72 bp | TTCCTGCTGACTGAACCATTGTTCCTGGGCAAGACCTaGGGTGATGACCCTCTGTTGGCTGTAACTACCAGA | + |
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Preference number: 6 (lower is better) Translates to: FLLTEPLFLGKT*GDDPLLAVTTR Trigger: TCTGGTAGTTACAGCCAACAGAGGGTCATCACCTCAGGTCTTGCCCAGGAACAATGGTTCAGTCAGCAGGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023478.8 ENSMUST00000114706.8 |
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| CDS CAA 72 bp | CACTGGTACGTGCCCGTATCTGACAGCTGTGTGTTATaGATGAAGATCGAGACATTGGTAGCAGGCATGGTG | + |
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Preference number: 6 (lower is better) Translates to: HWYVPVSDSCVL*MKIETLVAGMV Trigger: CACCATGCCTGCTACCAATGTCTCGATCTTCATCAATAACACACAGCTGTCAGATACGGGCACGTACCAGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023478.8 ENSMUST00000114706.8 |
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| CDS CAA 90 bp | TTCACCAAGCACTGGTACGTGCCCGTATCTGACAGCTGTGTGTTATaGATGAAGATCGAGACATTGGTAGCAGGCATGGTGCCGGTAAAT | + |
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Preference number: 6 (lower is better) Translates to: FTKHWYVPVSDSCVL*MKIETLVAGMVPVN Trigger: ATTTACCGGCACCATGCCTGCTACCAATGTCTCGATCTTCATCAATAACACACAGCTGTCAGATACGGGCACGTACCAGTGCTTGGTGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023478.8 ENSMUST00000114706.8 |
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| CDS CCA 72 bp | GTCAGCGTGTTATTTTCTGAGGAGGATATCTCCGTGTaGAAGGCTTTGGCAGAAGAGCATTTAGGGGGAAGA | + |
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Preference number: 6 (lower is better) Translates to: VSVLFSEEDISV*KALAEEHLGGR Trigger: TCTTCCCCCTAAATGCTCTTCTGCCAAAGCCTTCCACACGGAGATATCCTCCTCAGAAAATAACACGCTGAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023478.8 ENSMUST00000114706.8 |
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| CDS CAA 72 bp | TCTGACAGCTGTGTGTTATTGATGAAGATCGAGACATaGGTAGCAGGCATGGTGCCGGTAAATCCTACCCTC | + |
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Preference number: 6 (lower is better) Translates to: SDSCVLLMKIET*VAGMVPVNPTL Trigger: GAGGGTAGGATTTACCGGCACCATGCCTGCTACCAATGTCTCGATCTTCATCAATAACACACAGCTGTCAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023478.8 ENSMUST00000114706.8 |
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| CDS TCA 72 bp | TGGACCCAAAACCAGATGGTTCCCATTTGCATAGATTaGTGGGATAACTGCATTGCCAGAGAAAGACTGGCG | + |
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Preference number: 6 (lower is better) Translates to: WTQNQMVPICID*WDNCIARERLA Trigger: CGCCAGTCTTTCTCTGGCAATGCAGTTATCCCATCAATCTATGCAAATGGGAACCATCTGGTTTTGGGTCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023478.8 ENSMUST00000114706.8 |
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| CDS GCA 72 bp | TCCACCCTGATAAAGAATGACCTGTTCGGGCTGGTTTaGATTGGAGAGGGGAATGACCATCCAAATGACATT | + |
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Preference number: 6 (lower is better) Translates to: STLIKNDLFGLV*IGEGNDHPNDI Trigger: AATGTCATTTGGATGGTCATTCCCCTCTCCAATGCAAACCAGCCCGAACAGGTCATTCTTTATCAGGGTGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023478.8 |
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| CDS CCA 72 bp | TTGGATTGTTGTTCCAGTATCGACTGTTGTAGGTATTaGAAGAGGTCAGCGTGTTATTTTCTGAGGAGGATA | + |
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Preference number: 6 (lower is better) Translates to: LDCCSSIDCCRY*KRSACYFLRRI Trigger: TATCCTCCTCAGAAAATAACACGCTGACCTCTTCCAATACCTACAACAGTCGATACTGGAACAACAATCCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023478.8 ENSMUST00000114706.8 |
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| CDS CCA 72 bp | AAGTCACTGAAGTGGTTGAAAGACTCTGTGTTTCTATaGGGTTTTGGATTGTTGTTCCAGTATCGACTGTTG | + |
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Preference number: 6 (lower is better) Translates to: KSLKWLKDSVFL*GFGLLFQYRLL Trigger: CAACAGTCGATACTGGAACAACAATCCAAAACCCCATAGAAACACAGAGTCTTTCAACCACTTCAGTGACTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023478.8 ENSMUST00000114706.8 |
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