Pregenerated sensors for IGLV2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000076940Ensembl transcript IDs: ENSMUST00000103752.3, ENSMUST00000197518.2
Found 4 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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CDS TCA 90 bp | GTGAGTATGACTGTTCCACCAGGTGATGTGGTGAGTGCAGATTCCTaGGTCACAACAGCCTGGGAACTGGCTCCTGAGCAGAGAGCCAGG | + |
Preference number: 5 (lower is better) Translates to: VSMTVPPGDVVSADS*VTTAWELAPEQRAR Trigger: CCTGGCTCTCTGCTCAGGAGCCAGTTCCCAGGCTGTTGTGACTCAGGAATCTGCACTCACCACATCACCTGGTGGAACAGTCATACTCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197518.2 |
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CDS TCA 90 bp | GTGAGTATGACTGTTCCACCAGGTGATGTGGTGAGTGCAGATTCCTaGGTCACAACAGCCTGGGAACTGGCTGAGCAGAGAGCCAGGAGA | + |
Preference number: 5 (lower is better) Translates to: VSMTVPPGDVVSADS*VTTAWELAEQRARR Trigger: TCTCCTGGCTCTCTGCTCAGCCAGTTCCCAGGCTGTTGTGACTCAGGAATCTGCACTCACCACATCACCTGGTGGAACAGTCATACTCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103752.3 |
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CDS TCA 72 bp | ACTGTTCCACCAGGTGATGTGGTGAGTGCAGATTCCTaGGTCACAACAGCCTGGGAACTGGCTCCTGAGCAG | + |
Preference number: 6 (lower is better) Translates to: TVPPGDVVSADS*VTTAWELAPEQ Trigger: CTGCTCAGGAGCCAGTTCCCAGGCTGTTGTGACTCAGGAATCTGCACTCACCACATCACCTGGTGGAACAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197518.2 |
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CDS TCA 72 bp | ACTGTTCCACCAGGTGATGTGGTGAGTGCAGATTCCTaGGTCACAACAGCCTGGGAACTGGCTGAGCAGAGA | + |
Preference number: 6 (lower is better) Translates to: TVPPGDVVSADS*VTTAWELAEQR Trigger: TCTCTGCTCAGCCAGTTCCCAGGCTGTTGTGACTCAGGAATCTGCACTCACCACATCACCTGGTGGAACAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103752.3 |