Pregenerated sensors for IGLON5 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000013367Ensembl transcript IDs: ENSMUST00000107974.3, ENSMUST00000206336.2
Found 57 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AGGCCAGGGAGCAGGTTGTCAGAGAGCCCATACTTATGGGCCAGCTaGTGGGGCCCAAGGGCAGCTGGAGGGTACCACTGTGGCCAAGGG | + |
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Preference number: 1 (lower is better) Translates to: RPGSRLSESPYLWAS*WGPRAAGGYHCGQG Trigger: CCCTTGGCCACAGTGGTACCCTCCAGCTGCCCTTGGGCCCCAGCAGCTGGCCCATAAGTATGGGCTCTCTGACAACCTGCTCCCTGGCCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107974.3 |
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| 3UTR CCA 90 bp | CCAGGCTCGGAGTGGTGTGATTTTGGGTGTGTGGTTACTGGATTTTaGGCTGGTGGCATGGTGCCTCTGCCTGGGCTCAGAATGTCTGTG | + |
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Preference number: 1 (lower is better) Translates to: PGSEWCDFGCVVTGF*AGGMVPLPGLRMSV Trigger: CACAGACATTCTGAGCCCAGGCAGAGGCACCATGCCACCAGCCCAAAATCCAGTAACCACACACCCAAAATCACACCACTCCGAGCCTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107974.3 |
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| 3UTR GCA 90 bp | GTGATTTTGGGTGTGTGGTTACTGGATTTTGGGCTGGTGGCATGGTaGCTCTGCCTGGGCTCAGAATGTCTGTGCGTCTCCTCTCTCCCA | + |
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Preference number: 1 (lower is better) Translates to: VILGVWLLDFGLVAW*LCLGSECLCVSSLP Trigger: TGGGAGAGAGGAGACGCACAGACATTCTGAGCCCAGGCAGAGGCACCATGCCACCAGCCCAAAATCCAGTAACCACACACCCAAAATCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107974.3 |
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| 3UTR CCA 90 bp | GGTGTGATTTTGGGTGTGTGGTTACTGGATTTTGGGCTGGTGGCATaGTGCCTCTGCCTGGGCTCAGAATGTCTGTGCGTCTCCTCTCTC | + |
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Preference number: 1 (lower is better) Translates to: GVILGVWLLDFGLVA*CLCLGSECLCVSSL Trigger: GAGAGAGGAGACGCACAGACATTCTGAGCCCAGGCAGAGGCACCATGCCACCAGCCCAAAATCCAGTAACCACACACCCAAAATCACACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107974.3 |
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| 3UTR TCA 90 bp | GTATGTGTGTGTGTGGTCACAGCAGCCTTTGGAGGTATTATGGGTTaGGAGGCCAGGGAGCAGGTTGTCAGAGAGCCCATACTTATGGGC | + |
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Preference number: 1 (lower is better) Translates to: VCVCVVTAAFGGIMG*EAREQVVREPILMG Trigger: GCCCATAAGTATGGGCTCTCTGACAACCTGCTCCCTGGCCTCTCAACCCATAATACCTCCAAAGGCTGCTGTGACCACACACACACATAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107974.3 |
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| 3UTR CCA 90 bp | TGCATGCTGTGTGTGTGTGTGTGTGTGTGTGTGTATGTGTGTGTGTaGTCACAGCAGCCTTTGGAGGTATTATGGGTTGAGAGGCCAGGG | + |
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Preference number: 1 (lower is better) Translates to: CMLCVCVCVCVYVCV*SQQPLEVLWVERPG Trigger: CCCTGGCCTCTCAACCCATAATACCTCCAAAGGCTGCTGTGACCACACACACACATACACACACACACACACACACACACACAGCATGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107974.3 |
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| 3UTR GCA 90 bp | CACCCTACCTGCCCCTTCAATAGGGAGGAGAGGGGTAGGTGTTCATaGATATATGGGAAGGTGGAAAGCTGGCAATCTTCTTGTCAAAGC | + |
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Preference number: 1 (lower is better) Translates to: HPTCPFNREERGRCS*IYGKVESWQSSCQS Trigger: GCTTTGACAAGAAGATTGCCAGCTTTCCACCTTCCCATATATGCATGAACACCTACCCCTCTCCTCCCTATTGAAGGGGCAGGTAGGGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107974.3 |
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| 3UTR CCA 90 bp | TGTGTGTATGTGTGTGTGTGGTCACAGCAGCCTTTGGAGGTATTATaGGTTGAGAGGCCAGGGAGCAGGTTGTCAGAGAGCCCATACTTA | + |
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Preference number: 1 (lower is better) Translates to: CVYVCVWSQQPLEVL*VERPGSRLSESPYL Trigger: TAAGTATGGGCTCTCTGACAACCTGCTCCCTGGCCTCTCAACCCATAATACCTCCAAAGGCTGCTGTGACCACACACACACATACACACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107974.3 |
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| 3UTR CCA 90 bp | TCAATAGGGAGGAGAGGGGTAGGTGTTCATGCATATATGGGAAGGTaGAAAGCTGGCAATCTTCTTGTCAAAGCTTCCACCACGAAGCCC | + |
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Preference number: 1 (lower is better) Translates to: SIGRRGVGVHAYMGR*KAGNLLVKASTTKP Trigger: GGGCTTCGTGGTGGAAGCTTTGACAAGAAGATTGCCAGCTTTCCACCTTCCCATATATGCATGAACACCTACCCCTCTCCTCCCTATTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107974.3 |
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| 3UTR-3UTR TCA 90 bp | GAGGCCAGGGAGCAGGTTGTCAGAGAGCCCATACTTATGGGCCAGCTGCTGGGGAGGCTGAGTGACACCTaGCACCCACCCTACCTGCCC | + |
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Preference number: 2 (lower is better) Translates to: EAREQVVREPILMGQLLGRLSDT*HPPYLP Trigger: GGGCAGGTAGGGTGGGTGTCAGGTGTCACTCAGCCT...CCCCAGCAGCTGGCCCATAAGTATGGGCTCTCTGACAACCTGCTCCCTGGCCTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107974.3 |
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| 3UTR-3UTR GCA 90 bp | GAGGCCAGGGAGCAGGTTGTCAGAGAGCCCATACTTATGGGCCAGCTGCTGGGGGACACCCACCCTACCTaGCCCTTCAATAGGGAGGAG | + |
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Preference number: 2 (lower is better) Translates to: EAREQVVREPILMGQLLGDTHPT*PFNREE Trigger: CTCCTCCCTATTGAAGGGGCAGGTAGGGTGGGTGTC...CCCCAGCAGCTGGCCCATAAGTATGGGCTCTCTGACAACCTGCTCCCTGGCCTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000107974.3 |
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| 3UTR-3UTR CCA 90 bp | TGGAGGTATTATGGGTTGAGAGGCCAGGGAGCAGGTTGTCAGAGAGCCCATACTGGGCCCAAGGGCAGCTaGAGGGTACCACTGTGGCCA | + |
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Preference number: 2 (lower is better) Translates to: WRYYGLRGQGAGCQRAHTGPKGS*RVPLWP Trigger: TGGCCACAGTGGTACCCTCCAGCTGCCCTTGGGCCC...AGTATGGGCTCTCTGACAACCTGCTCCCTGGCCTCTCAACCCATAATACCTCCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107974.3 |
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| 3UTR-3UTR CCA 90 bp | GGGAGCAGGTTGTCAGAGAGCCCATACTTATGGGCCAGCTGCTGGGGCCCAAGGAGCCTATCAATTGAATaGAAGCACCGATTGGCCCGG | + |
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Preference number: 2 (lower is better) Translates to: GSRLSESPYLWASCWGPRSLSIE*KHRLAR Trigger: CCGGGCCAATCGGTGCTTCCATTCAATTGATAGGCT...CCTTGGGCCCCAGCAGCTGGCCCATAAGTATGGGCTCTCTGACAACCTGCTCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107974.3 |
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| 3UTR CAA 90 bp | TGTATGTGTGTGTGTGGTCACAGCAGCCTTTGGAGGTATTATGGGTaGAGAGGCCAGGGAGCAGGTTGTCAGAGAGCCCATACTTATGGG | + |
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Preference number: 2 (lower is better) Translates to: CMCVCGHSSLWRYYG*RGQGAGCQRAHTYG Trigger: CCCATAAGTATGGGCTCTCTGACAACCTGCTCCCTGGCCTCTCAACCCATAATACCTCCAAAGGCTGCTGTGACCACACACACACATACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107974.3 |
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| 3UTR CAA 90 bp | TGTGTGTGTGTGTGTGTGTATGTGTGTGTGTGGTCACAGCAGCCTTaGGAGGTATTATGGGTTGAGAGGCCAGGGAGCAGGTTGTCAGAG | + |
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Preference number: 2 (lower is better) Translates to: CVCVCVYVCVWSQQP*EVLWVERPGSRLSE Trigger: CTCTGACAACCTGCTCCCTGGCCTCTCAACCCATAATACCTCCAAAGGCTGCTGTGACCACACACACACATACACACACACACACACACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107974.3 |
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| 3UTR-3UTR GCA 90 bp | TGGAGGTATTATGGGTTGAGAGGCCAGGGAGCAGGTTGTCAGAGAGCCCATACTAGGGGTAGGTGTTCATaGATATATGGGAAGGTGGAA | + |
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Preference number: 2 (lower is better) Translates to: WRYYGLRGQGAGCQRAHTRGRCS*IYGKVE Trigger: TTCCACCTTCCCATATATGCATGAACACCTACCCCT...AGTATGGGCTCTCTGACAACCTGCTCCCTGGCCTCTCAACCCATAATACCTCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107974.3 |
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| 3UTR-3UTR TCA 90 bp | TATATGGGAAGGTGGAAAGCTGGCAATCTTCTTGTCAAAGCTTCCACCACGAAGTCACAATTGGAAACGTaGACGGGGTGGCGAGAATGG | + |
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Preference number: 2 (lower is better) Translates to: YMGRWKAGNLLVKASTTKSQLET*TGWREW Trigger: CCATTCTCGCCACCCCGTTCACGTTTCCAATTGTGA...CTTCGTGGTGGAAGCTTTGACAAGAAGATTGCCAGCTTTCCACCTTCCCATATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107974.3 |
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| 3UTR-3UTR CCA 90 bp | TGTGTGCGTGCATGTGTGCATGTGTATGTGTGTTTGTGTGTGCATGAGCGTGCAGCATATATGGGAAGGTaGAAAGCTGGCAATCTTCTT | + |
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Preference number: 2 (lower is better) Translates to: CVRACVHVYVCLCVHERAAYMGR*KAGNLL Trigger: AAGAAGATTGCCAGCTTTCCACCTTCCCATATATGC...TGCACGCTCATGCACACACAAACACACATACACATGCACACATGCACGCACACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107974.3 |
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| 3UTR-3UTR CAA 90 bp | GGCTGGTGGCATGGTGCCTCTGCCTGGGCTCAGAATGTCTGTGCGTCTCCTCTCAGGCCAGGGAGCAGGTaGTCAGAGAGCCCATACTTA | + |
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Preference number: 3 (lower is better) Translates to: GWWHGASAWAQNVCASPLRPGSR*SESPYL Trigger: TAAGTATGGGCTCTCTGACAACCTGCTCCCTGGCCT...GAGAGGAGACGCACAGACATTCTGAGCCCAGGCAGAGGCACCATGCCACCAGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107974.3 |
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| 3UTR TCA 72 bp | CAGCCTTCATGGAGATCCCCACCTATTCACAAAGGCTaGGTGACACCTGACACCCACCCTACCTGCCCCTTC | + |
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Preference number: 3 (lower is better) Translates to: QPSWRSPPIHKG*VTPDTHPTCPF Trigger: GAAGGGGCAGGTAGGGTGGGTGTCAGGTGTCACTCAGCCTTTGTGAATAGGTGGGGATCTCCATGAAGGCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107974.3 |
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| 3UTR GCA 72 bp | GTTACAGACTCTGGGGCAGGTGAAGCCAGGAGCTATTaGTGGTCAGTCGCTGGTGTGCATGTGTGCGTGCAT | + |
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Preference number: 3 (lower is better) Translates to: VTDSGAGEARSY*WSVAGVHVCVH Trigger: ATGCACGCACACATGCACACCAGCGACTGACCAGCAATAGCTCCTGGCTTCACCTGCCCCAGAGTCTGTAAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107974.3 |
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| 3UTR CCA 72 bp | TACTGGATTTTGGGCTGGTGGCATGGTGCCTCTGCCTaGGCTCAGAATGTCTGTGCGTCTCCTCTCTCCCAA | + |
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Preference number: 3 (lower is better) Translates to: YWILGWWHGASA*AQNVCASPLSQ Trigger: TTGGGAGAGAGGAGACGCACAGACATTCTGAGCCCAGGCAGAGGCACCATGCCACCAGCCCAAAATCCAGTA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107974.3 |
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| 3UTR CCA 72 bp | TTGGGTGTGTGGTTACTGGATTTTGGGCTGGTGGCATaGTGCCTCTGCCTGGGCTCAGAATGTCTGTGCGTC | + |
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Preference number: 3 (lower is better) Translates to: LGVWLLDFGLVA*CLCLGSECLCV Trigger: GACGCACAGACATTCTGAGCCCAGGCAGAGGCACCATGCCACCAGCCCAAAATCCAGTAACCACACACCCAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107974.3 |
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| 3UTR TCA 72 bp | CTCTCTGCCCTCGTCTTCACCAGGCTCGGAGTGGTGTaGTTTTGGGTGTGTGGTTACTGGATTTTGGGCTGG | + |
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Preference number: 3 (lower is better) Translates to: LSALVFTRLGVV*FWVCGYWILGW Trigger: CCAGCCCAAAATCCAGTAACCACACACCCAAAATCACACCACTCCGAGCCTGGTGAAGACGAGGGCAGAGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107974.3 |
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| 3UTR CCA 72 bp | GAGTGGTGTGATTTTGGGTGTGTGGTTACTGGATTTTaGGCTGGTGGCATGGTGCCTCTGCCTGGGCTCAGA | + |
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Preference number: 3 (lower is better) Translates to: EWCDFGCVVTGF*AGGMVPLPGLR Trigger: TCTGAGCCCAGGCAGAGGCACCATGCCACCAGCCCAAAATCCAGTAACCACACACCCAAAATCACACCACTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107974.3 |
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| 3UTR CCA 72 bp | CTTCACCAGGCTCGGAGTGGTGTGATTTTGGGTGTGTaGTTACTGGATTTTGGGCTGGTGGCATGGTGCCTC | + |
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Preference number: 3 (lower is better) Translates to: LHQARSGVILGV*LLDFGLVAWCL Trigger: GAGGCACCATGCCACCAGCCCAAAATCCAGTAACCACACACCCAAAATCACACCACTCCGAGCCTGGTGAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107974.3 |
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| 3UTR TCA 72 bp | TGTGTGGTCACAGCAGCCTTTGGAGGTATTATGGGTTaGGAGGCCAGGGAGCAGGTTGTCAGAGAGCCCATA | + |
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Preference number: 3 (lower is better) Translates to: CVVTAAFGGIMG*EAREQVVREPI Trigger: TATGGGCTCTCTGACAACCTGCTCCCTGGCCTCTCAACCCATAATACCTCCAAAGGCTGCTGTGACCACACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107974.3 |
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| 3UTR TCA 72 bp | TCAGAATGTCTGTGCGTCTCCTCTCTCCCAACTCTGTaGGGCCTGACGTGTAGCAAAGTGAGGTGTTCCCAT | + |
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Preference number: 3 (lower is better) Translates to: SECLCVSSLPTL*GLTCSKVRCSH Trigger: ATGGGAACACCTCACTTTGCTACACGTCAGGCCTCACAGAGTTGGGAGAGAGGAGACGCACAGACATTCTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107974.3 |
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| 3UTR CCA 72 bp | TGTGTGTGTATGTGTGTGTGTGGTCACAGCAGCCTTTaGAGGTATTATGGGTTGAGAGGCCAGGGAGCAGGT | + |
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Preference number: 3 (lower is better) Translates to: CVCMCVCGHSSL*RYYGLRGQGAG Trigger: ACCTGCTCCCTGGCCTCTCAACCCATAATACCTCCAAAGGCTGCTGTGACCACACACACACATACACACACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107974.3 |
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| 3UTR-3UTR CAA 90 bp | TTCATGCATATATGGGAAGGTGGAAAGCTGGCAATCTTCTTGTCAAAGCTTCCAACCCGTGGCTGGCGCTaGCTCACCCCCTTTTTCTCG | + |
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Preference number: 3 (lower is better) Translates to: FMHIWEGGKLAIFLSKLPTRGWR*LTPFFS Trigger: CGAGAAAAAGGGGGTGAGCAAGCGCCAGCCACGGGT...TGGAAGCTTTGACAAGAAGATTGCCAGCTTTCCACCTTCCCATATATGCATGAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000107974.3 |
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| 3UTR-3UTR CAA 90 bp | TGGAGGTATTATGGGTTGAGAGGCCAGGGAGCAGGTTGTCAGAGAGCCCATACTAAGCTGGCAATCTTCTaGTCAAAGCTTCCACCACGA | + |
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Preference number: 3 (lower is better) Translates to: WRYYGLRGQGAGCQRAHTKLAIF*SKLPPR Trigger: TCGTGGTGGAAGCTTTGACAAGAAGATTGCCAGCTT...AGTATGGGCTCTCTGACAACCTGCTCCCTGGCCTCTCAACCCATAATACCTCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107974.3 |
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| 3UTR GCA 72 bp | TGCCCCTTCAATAGGGAGGAGAGGGGTAGGTGTTCATaGATATATGGGAAGGTGGAAAGCTGGCAATCTTCT | + |
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Preference number: 3 (lower is better) Translates to: CPFNREERGRCS*IYGKVESWQSS Trigger: AGAAGATTGCCAGCTTTCCACCTTCCCATATATGCATGAACACCTACCCCTCTCCTCCCTATTGAAGGGGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107974.3 |
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| 3UTR CCA 72 bp | GGTAGGTGTTCATGCATATATGGGAAGGTGGAAAGCTaGCAATCTTCTTGTCAAAGCTTCCACCACGAAGCC | + |
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Preference number: 3 (lower is better) Translates to: GRCSCIYGKVES*QSSCQSFHHEA Trigger: GGCTTCGTGGTGGAAGCTTTGACAAGAAGATTGCCAGCTTTCCACCTTCCCATATATGCATGAACACCTACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107974.3 |
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| 3UTR CCA 72 bp | AGGAGAGGGGTAGGTGTTCATGCATATATGGGAAGGTaGAAAGCTGGCAATCTTCTTGTCAAAGCTTCCACC | + |
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Preference number: 3 (lower is better) Translates to: RRGVGVHAYMGR*KAGNLLVKAST Trigger: GGTGGAAGCTTTGACAAGAAGATTGCCAGCTTTCCACCTTCCCATATATGCATGAACACCTACCCCTCTCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107974.3 |
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| 3UTR CCA 72 bp | TGTGTGTGTGTGTGTGTGTGTGTGTATGTGTGTGTGTaGTCACAGCAGCCTTTGGAGGTATTATGGGTTGAG | + |
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Preference number: 3 (lower is better) Translates to: CVCVCVCVYVCV*SQQPLEVLWVE Trigger: CTCAACCCATAATACCTCCAAAGGCTGCTGTGACCACACACACACATACACACACACACACACACACACACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107974.3 |
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| CDS-3UTR TCA 90 bp | CCTGGAGACCCGTGGCTGGCGCTTGCTCACCCCCTTTTTCTCGCTCCTGGCCTGGCTCGGTCTGCACCTTaGGGCCCTCTGCAGAACCGC | + |
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Preference number: 4 (lower is better) Translates to: PGDPWLALAHPLFLAPGLARSAP*GPLQNR Trigger: GCGGTTCTGCAGAGGGCCTCAAGGTGCAGACCGAGC...CAGGCCAGGAGCGAGAAAAAGGGGGTGAGCAAGCGCCAGCCACGGGTCTCCAGG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000107974.3 ENSMUST00000206336.2 |
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| CDS-3UTR GCA 90 bp | TGGCTAAGAGCTCTTCTGTCCCCCTGGAGACCCGTGGCTGGCGCTTGCTCACCCCGGGTGCGCTCGGTCTaGACCTTGAGGCCCTCTGCA | + |
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Preference number: 4 (lower is better) Translates to: WLRALLSPWRPVAGACSPRVRSV*TLRPSA Trigger: TGCAGAGGGCCTCAAGGTGCAGACCGAGCGCACCCG...GGGTGAGCAAGCGCCAGCCACGGGTCTCCAGGGGGACAGAAGAGCTCTTAGCCA 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000107974.3 ENSMUST00000206336.2 |
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| CDS-3UTR CCA 90 bp | CCTGGAGACCCGTGGCTGGCGCTTGCTCACCCCCTTTTTCTCGCTCCTGGCCTGGGTGACAGTGGGCTCTaGCCTTCCCACAGCCAGGCA | + |
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Preference number: 4 (lower is better) Translates to: PGDPWLALAHPLFLAPGLGDSGL*PSHSQA Trigger: TGCCTGGCTGTGGGAAGGCCAGAGCCCACTGTCACC...CAGGCCAGGAGCGAGAAAAAGGGGGTGAGCAAGCGCCAGCCACGGGTCTCCAGG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000107974.3 ENSMUST00000206336.2 |
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| CDS-3UTR CCA 90 bp | CCTGGAGACCCGTGGCTGGCGCTTGCTCACCCCCTTTTTCTCGCTCCTGGCCTGGTTCTCCAGGGATCCTaGGCGCAGGAGCCGCATGGA | + |
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Preference number: 4 (lower is better) Translates to: PGDPWLALAHPLFLAPGLVLQGS*AQEPHG Trigger: TCCATGCGGCTCCTGCGCCCAGGATCCCTGGAGAAC...CAGGCCAGGAGCGAGAAAAAGGGGGTGAGCAAGCGCCAGCCACGGGTCTCCAGG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000107974.3 ENSMUST00000206336.2 |
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| CDS-3UTR TCA 90 bp | GAGGCCAGGGAGCAGGTTGTCAGAGAGCCCATACTTATGGGCCAGCTGCTGGGGGCTCGGTCTGCACCTTaGGGCCCTCTGCAGAACCGC | + |
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Preference number: 4 (lower is better) Translates to: EAREQVVREPILMGQLLGARSAP*GPLQNR Trigger: GCGGTTCTGCAGAGGGCCTCAAGGTGCAGACCGAGC...CCCCAGCAGCTGGCCCATAAGTATGGGCTCTCTGACAACCTGCTCCCTGGCCTC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000107974.3 |
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| CDS-3UTR GCA 90 bp | GGCTGGTGGCATGGTGCCTCTGCCTGGGCTCAGAATGTCTGTGCGTCTCCTCTCCGGGTGCGCTCGGTCTaGACCTTGAGGCCCTCTGCA | + |
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Preference number: 4 (lower is better) Translates to: GWWHGASAWAQNVCASPLRVRSV*TLRPSA Trigger: TGCAGAGGGCCTCAAGGTGCAGACCGAGCGCACCCG...GAGAGGAGACGCACAGACATTCTGAGCCCAGGCAGAGGCACCATGCCACCAGCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107974.3 |
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| CDS-3UTR CCA 90 bp | CCTGGAGACCCGTGGCTGGCGCTTGCTCACCCCCTTTTTCTCGCTCCTGGCCTGCTGAACTCCAGGCTCTaGGACAGCAACCCTCGGCTG | + |
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Preference number: 4 (lower is better) Translates to: PGDPWLALAHPLFLAPGLLNSRL*DSNPRL Trigger: CAGCCGAGGGTTGCTGTCCCAGAGCCTGGAGTTCAG...CAGGCCAGGAGCGAGAAAAAGGGGGTGAGCAAGCGCCAGCCACGGGTCTCCAGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000107974.3 |
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| CDS-3UTR CCA 90 bp | GAGGCCAGGGAGCAGGTTGTCAGAGAGCCCATACTTATGGGCCAGCTGCTGGGGGCACCCGGGGATCACTaGTCCAACGGTCATTGCCCG | + |
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Preference number: 4 (lower is better) Translates to: EAREQVVREPILMGQLLGAPGDH*SNGHCP Trigger: CGGGCAATGACCGTTGGACCAGTGATCCCCGGGTGC...CCCCAGCAGCTGGCCCATAAGTATGGGCTCTCTGACAACCTGCTCCCTGGCCTC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000107974.3 |
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| CDS-3UTR CCA 90 bp | GGGAGCAGGTTGTCAGAGAGCCCATACTTATGGGCCAGCTGCTGGGGCCCAAGGGGTGACAGTGGGCTCTaGCCTTCCCACAGCCAGGCA | + |
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Preference number: 4 (lower is better) Translates to: GSRLSESPYLWASCWGPRGDSGL*PSHSQA Trigger: TGCCTGGCTGTGGGAAGGCCAGAGCCCACTGTCACC...CCTTGGGCCCCAGCAGCTGGCCCATAAGTATGGGCTCTCTGACAACCTGCTCCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107974.3 |
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| CDS-3UTR CCA 90 bp | CCTGGAGACCCGTGGCTGGCGCTTGCTCACCCCCTTTTTCTCGCTCCTGGCCTGAGTTGCCATAGTGCCTaGCGCTCACGTTGGCGAAGA | + |
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Preference number: 4 (lower is better) Translates to: PGDPWLALAHPLFLAPGLSCHSA*RSRWRR Trigger: TCTTCGCCAACGTGAGCGCCAGGCACTATGGCAACT...CAGGCCAGGAGCGAGAAAAAGGGGGTGAGCAAGCGCCAGCCACGGGTCTCCAGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000107974.3 ENSMUST00000206336.2 |
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| CDS-3UTR TCA 90 bp | GAGGCCAGGGAGCAGGTTGTCAGAGAGCCCATACTTATGGGCCAGCTGCTGGGGCAGGATCTCACCCTCTaGGGTGAAACCGTCTCGGAG | + |
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Preference number: 4 (lower is better) Translates to: EAREQVVREPILMGQLLGQDLTL*GETVSE Trigger: CTCCGAGACGGTTTCACCTCAGAGGGTGAGATCCTG...CCCCAGCAGCTGGCCCATAAGTATGGGCTCTCTGACAACCTGCTCCCTGGCCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107974.3 |
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| CDS-3UTR TCA 90 bp | GGGAGCAGGTTGTCAGAGAGCCCATACTTATGGGCCAGCTGCTGGGGCCCAAGGATAGTTGTCCGCAGGTaGGCTGAACTCCAGGCTCTG | + |
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Preference number: 4 (lower is better) Translates to: GSRLSESPYLWASCWGPRIVVRR*AELQAL Trigger: CAGAGCCTGGAGTTCAGCTCACCTGCGGACAACTAT...CCTTGGGCCCCAGCAGCTGGCCCATAAGTATGGGCTCTCTGACAACCTGCTCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107974.3 |
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| CDS-3UTR TCA 90 bp | CCTGGAGACCCGTGGCTGGCGCTTGCTCACCCCCTTTTTCTCGCTCCTGGCCTGATTCACTGCCACGGGTaGGGAGATGTTCACAATACG | + |
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Preference number: 4 (lower is better) Translates to: PGDPWLALAHPLFLAPGLIHCHG*GDVHNT Trigger: CGTATTGTGAACATCTCCTCACCCGTGGCAGTGAAT...CAGGCCAGGAGCGAGAAAAAGGGGGTGAGCAAGCGCCAGCCACGGGTCTCCAGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000107974.3 ENSMUST00000206336.2 |
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| CDS-3UTR GCA 90 bp | TGGCTAAGAGCTCTTCTGTCCCCCTGGAGACCCGTGGCTGGCGCTTGCTCACCCTGGTCCAACGGTCATTaGCCGCATACAGGATGTTGG | + |
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Preference number: 4 (lower is better) Translates to: WLRALLSPWRPVAGACSPWSNGH*PHTGCW Trigger: CCAACATCCTGTATGCGGGCAATGACCGTTGGACCA...GGGTGAGCAAGCGCCAGCCACGGGTCTCCAGGGGGACAGAAGAGCTCTTAGCCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000107974.3 |
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| CDS-3UTR CCA 90 bp | TGGCTAAGAGCTCTTCTGTCCCCCTGGAGACCCGTGGCTGGCGCTTGCTCACCCTCATCCTTGTACCACTaGAAATCTGCCGGCGGCACA | + |
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Preference number: 4 (lower is better) Translates to: WLRALLSPWRPVAGACSPSSLYH*KSAGGT Trigger: TGTGCCGCCGGCAGATTTCCAGTGGTACAAGGATGA...GGGTGAGCAAGCGCCAGCCACGGGTCTCCAGGGGGACAGAAGAGCTCTTAGCCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000107974.3 ENSMUST00000206336.2 |
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| CDS-3UTR TCA 90 bp | TGGCTAAGAGCTCTTCTGTCCCCCTGGAGACCCGTGGCTGGCGCTTGCTCACCCATTCACTGCCACGGGTaGGGAGATGTTCACAATACG | + |
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Preference number: 4 (lower is better) Translates to: WLRALLSPWRPVAGACSPIHCHG*GDVHNT Trigger: CGTATTGTGAACATCTCCTCACCCGTGGCAGTGAAT...GGGTGAGCAAGCGCCAGCCACGGGTCTCCAGGGGGACAGAAGAGCTCTTAGCCA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000107974.3 ENSMUST00000206336.2 |
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| CDS-3UTR CCA 90 bp | TGGAGGTATTATGGGTTGAGAGGCCAGGGAGCAGGTTGTCAGAGAGCCCATACTTCGTATTCCCCGGCCTaGCCCCGCTGGATGTCTGAG | + |
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Preference number: 4 (lower is better) Translates to: WRYYGLRGQGAGCQRAHTSYSPA*PRWMSE Trigger: CTCAGACATCCAGCGGGGCCAGGCCGGGGAATACGA...AGTATGGGCTCTCTGACAACCTGCTCCCTGGCCTCTCAACCCATAATACCTCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107974.3 |
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| CDS-3UTR CCA 90 bp | TATATGGGAAGGTGGAAAGCTGGCAATCTTCTTGTCAAAGCTTCCACCACGAAGGTTCTCCAGGGATCCTaGGCGCAGGAGCCGCATGGA | + |
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Preference number: 4 (lower is better) Translates to: YMGRWKAGNLLVKASTTKVLQGS*AQEPHG Trigger: TCCATGCGGCTCCTGCGCCCAGGATCCCTGGAGAAC...CTTCGTGGTGGAAGCTTTGACAAGAAGATTGCCAGCTTTCCACCTTCCCATATA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107974.3 |
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| CDS-3UTR TCA 90 bp | TTCATGCATATATGGGAAGGTGGAAAGCTGGCAATCTTCTTGTCAAAGCTTCCATCTCACCCTCTGAGGTaGAACCGTCTCGGAGCTGTC | + |
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Preference number: 4 (lower is better) Translates to: FMHIWEGGKLAIFLSKLPSHPLR*NRLGAV Trigger: GACAGCTCCGAGACGGTTTCACCTCAGAGGGTGAGA...TGGAAGCTTTGACAAGAAGATTGCCAGCTTTCCACCTTCCCATATATGCATGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107974.3 |
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| CDS-3UTR CAA 90 bp | CCTGGAGACCCGTGGCTGGCGCTTGCTCACCCCCTTTTTCTCGCTCCTGGCCTGCAGAGAAGGTTCACATaGCCCCCTTCATTCACTGCC | + |
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Preference number: 5 (lower is better) Translates to: PGDPWLALAHPLFLAPGLQRRFT*PPSFTA Trigger: GGCAGTGAATGAAGGGGGCAATGTGAACCTTCTCTG...CAGGCCAGGAGCGAGAAAAAGGGGGTGAGCAAGCGCCAGCCACGGGTCTCCAGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 2 transcripts: ENSMUST00000107974.3 ENSMUST00000206336.2 |
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| CDS-3UTR CAA 90 bp | GGGAGCAGGTTGTCAGAGAGCCCATACTTATGGGCCAGCTGCTGGGGCCCAAGGCAGAGAAGGTTCACATaGCCCCCTTCATTCACTGCC | + |
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Preference number: 5 (lower is better) Translates to: GSRLSESPYLWASCWGPRQRRFT*PPSFTA Trigger: GGCAGTGAATGAAGGGGGCAATGTGAACCTTCTCTG...CCTTGGGCCCCAGCAGCTGGCCCATAAGTATGGGCTCTCTGACAACCTGCTCCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000107974.3 |
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| CDS CAA 72 bp | TCTGGCCTTCCCACAGCCAGGCAGAGAAGGTTCACATaGCCCCCTTCATTCACTGCCACGGGTGAGGAGATG | + |
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Preference number: 6 (lower is better) Translates to: SGLPTARQRRFT*PPSFTATGEEM Trigger: CATCTCCTCACCCGTGGCAGTGAATGAAGGGGGCAATGTGAACCTTCTCTGCCTGGCTGTGGGAAGGCCAGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000107974.3 ENSMUST00000206336.2 |
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