Pregenerated sensors for IGLL1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000075370Ensembl transcript IDs: ENSMUST00000100136.4
Found 30 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | AGATATTTATTGAGTATTAGGCACAGGAAAGACAGTGAGATGGTTAATGGGAAATCAGATCCAGGCCCCTaGGGCTTCAGGGAGGATTGT | + |
|
Preference number: 2 (lower is better) Translates to: RYLLSIRHRKDSEMVNGKSDPGP*GFREDC Trigger: ACAATCCTCCCTGAAGCCTCAGGGGCCTGGATCTGA...TTTCCCATTAACCATCTCACTGTCTTTCCTGTGCCTAATACTCAATAAATATCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100136.4 |
||
| CDS-3UTR TCA 90 bp | AACTTTTTCTGGCACTTCAGATCCAGGCCCCTGAGGCTTCAGGGAGGATTGTGGCCTGTTGCTTCCCACTaGAGCTCCAGGGCCCACAGC | + |
|
Preference number: 4 (lower is better) Translates to: NFFWHFRSRPLRLQGGLWPVASH*SSRAHS Trigger: GCTGTGGGCCCTGGAGCTTCAGTGGGAAGCAACAGG...CCACAATCCTCCCTGAAGCCTCAGGGGCCTGGATCTGAAGTGCCAGAAAAAGTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000100136.4 |
||
| CDS-3UTR TCA 90 bp | AACTTTTTCTGGCACTTCAGATCCAGGCCCCTGAGGCTTCAGGGAGGATTGTGGAAGGCAGGAACAGAGTaGCCAAGGGGTCAGACTTGG | + |
|
Preference number: 4 (lower is better) Translates to: NFFWHFRSRPLRLQGGLWKAGTE*PRGQTW Trigger: CCAAGTCTGACCCCTTGGTCACTCTGTTCCTGCCTT...CCACAATCCTCCCTGAAGCCTCAGGGGCCTGGATCTGAAGTGCCAGAAAAAGTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000100136.4 |
||
| CDS-3UTR TCA 90 bp | AACTTTTTCTGGCACTTCAGATCCAGGCCCCTGAGGCTTCAGGGAGGATTGTGGTCTCTACACCCTGAGTaGCAGGGACCCCATCTACCT | + |
|
Preference number: 4 (lower is better) Translates to: NFFWHFRSRPLRLQGGLWSLHPE*QGPHLP Trigger: AGGTAGATGGGGTCCCTGTCACTCAGGGTGTAGAGA...CCACAATCCTCCCTGAAGCCTCAGGGGCCTGGATCTGAAGTGCCAGAAAAAGTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000100136.4 |
||
| CDS-3UTR TCA 90 bp | AACTTTTTCTGGCACTTCAGATCCAGGCCCCTGAGGCTTCAGGGAGGATTGTGGGTTGTCTCTACACCCTaGGTGACAGGGACCCCATCT | + |
|
Preference number: 4 (lower is better) Translates to: NFFWHFRSRPLRLQGGLWVVSTP*VTGTPS Trigger: AGATGGGGTCCCTGTCACTCAGGGTGTAGAGACAAC...CCACAATCCTCCCTGAAGCCTCAGGGGCCTGGATCTGAAGTGCCAGAAAAAGTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000100136.4 |
||
| CDS-3UTR GCA 90 bp | AACTTTTTCTGGCACTTCAGATCCAGGCCCCTGAGGCTTCAGGGAGGATTGTGGAGGAGAACTTCACACTaGCTGGGGATAGTGCCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: NFFWHFRSRPLRLQGGLWRRTSH*LGIVPR Trigger: TCTGGGCACTATCCCCAGGCAGTGTGAAGTTCTCCT...CCACAATCCTCCCTGAAGCCTCAGGGGCCTGGATCTGAAGTGCCAGAAAAAGTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000100136.4 |
||
| CDS-3UTR CCA 90 bp | AACTTTTTCTGGCACTTCAGATCCAGGCCCCTGAGGCTTCAGGGAGGATTGTGGGGGGAAAGTATGTGGTaGACACCATCCACTAGACCC | + |
|
Preference number: 4 (lower is better) Translates to: NFFWHFRSRPLRLQGGLWGESMW*TPSTRP Trigger: GGGTCTAGTGGATGGTGTCCACCACATACTTTCCCC...CCACAATCCTCCCTGAAGCCTCAGGGGCCTGGATCTGAAGTGCCAGAAAAAGTT 53% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000100136.4 |
||
| CDS-3UTR CCA 90 bp | AACTTTTTCTGGCACTTCAGATCCAGGCCCCTGAGGCTTCAGGGAGGATTGTGGAAACTGGGGCTTAGATaGAAGCCTATGGGGCGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: NFFWHFRSRPLRLQGGLWKLGLR*KPMGRA Trigger: TGCTCGCCCCATAGGCTTCCATCTAAGCCCCAGTTT...CCACAATCCTCCCTGAAGCCTCAGGGGCCTGGATCTGAAGTGCCAGAAAAAGTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000100136.4 |
||
| CDS-3UTR TCA 90 bp | AACTTTTTCTGGCACTTCAGATCCAGGCCCCTGAGGCTTCAGGGAGGATTGTGGTCTGCTCCTTTCTGCTaGGCTTGGGGAAAGTATGTG | + |
|
Preference number: 4 (lower is better) Translates to: NFFWHFRSRPLRLQGGLWSAPFC*AWGKYV Trigger: CACATACTTTCCCCAAGCTCAGCAGAAAGGAGCAGA...CCACAATCCTCCCTGAAGCCTCAGGGGCCTGGATCTGAAGTGCCAGAAAAAGTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000100136.4 |
||
| CDS-3UTR TCA 90 bp | AACTTTTTCTGGCACTTCAGATCCAGGCCCCTGAGGCTTCAGGGAGGATTGTGGGTGGCCTTGTTGGCCTaGAGATTCTTTAAGGAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: NFFWHFRSRPLRLQGGLWVALLA*RFFKEG Trigger: GCCTTCCTTAAAGAATCTTCAGGCCAACAAGGCCAC...CCACAATCCTCCCTGAAGCCTCAGGGGCCTGGATCTGAAGTGCCAGAAAAAGTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000100136.4 |
||
| CDS-3UTR TCA 90 bp | AACTTTTTCTGGCACTTCAGATCCAGGCCCCTGAGGCTTCAGGGAGGATTGTGGAGAACACTCAGCAGGTaGCACACTCTTCTCCACAGT | + |
|
Preference number: 4 (lower is better) Translates to: NFFWHFRSRPLRLQGGLWRTLSR*HTLLHS Trigger: ACTGTGGAGAAGAGTGTGTCACCTGCTGAGTGTTCT...CCACAATCCTCCCTGAAGCCTCAGGGGCCTGGATCTGAAGTGCCAGAAAAAGTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000100136.4 |
||
| CDS-3UTR CCA 90 bp | GTAAGATATTTATTGAGTATTAGGCACAGGAAAGACAGTGAGATGGTTAATGGGTATGGGGCGAGCACCTaGGACCTGCTCCCCGTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: VRYLLSIRHRKDSEMVNGYGAST*DLLPVG Trigger: TCCCACGGGGAGCAGGTCCCAGGTGCTCGCCCCATA...CCCATTAACCATCTCACTGTCTTTCCTGTGCCTAATACTCAATAAATATCTTAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100136.4 |
||
| CDS-3UTR TCA 90 bp | GTAAGATATTTATTGAGTATTAGGCACAGGAAAGACAGTGAGATGGTTAATGGGTGTTTCCTTCATGAGTaGCCCGGCAGCTGTATCTAC | + |
|
Preference number: 4 (lower is better) Translates to: VRYLLSIRHRKDSEMVNGCFLHE*PGSCIY Trigger: GTAGATACAGCTGCCGGGTCACTCATGAAGGAAACA...CCCATTAACCATCTCACTGTCTTTCCTGTGCCTAATACTCAATAAATATCTTAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100136.4 |
||
| CDS-3UTR TCA 90 bp | GTAAGATATTTATTGAGTATTAGGCACAGGAAAGACAGTGAGATGGTTAATGGGACAGTGTTTCCTTCATaGGTGACCCGGCAGCTGTAT | + |
|
Preference number: 4 (lower is better) Translates to: VRYLLSIRHRKDSEMVNGTVFPS*VTRQLY Trigger: ATACAGCTGCCGGGTCACTCATGAAGGAAACACTGT...CCCATTAACCATCTCACTGTCTTTCCTGTGCCTAATACTCAATAAATATCTTAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100136.4 |
||
| CDS-3UTR CCA 90 bp | AGATATTTATTGAGTATTAGGCACAGGAAAGACAGTGAGATGGTTAATGGGAAACCTAGGATTGTGAGCTaGGTCCCACCACCAAAGACA | + |
|
Preference number: 4 (lower is better) Translates to: RYLLSIRHRKDSEMVNGKPRIVS*VPPPKT Trigger: TGTCTTTGGTGGTGGGACCCAGCTCACAATCCTAGG...TTTCCCATTAACCATCTCACTGTCTTTCCTGTGCCTAATACTCAATAAATATCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100136.4 |
||
| CDS-3UTR CCA 90 bp | GTAAGATATTTATTGAGTATTAGGCACAGGAAAGACAGTGAGATGGTTAATGGGAAGACATACCAAAACTaGGGCTTAGATGGAAGCCTA | + |
|
Preference number: 4 (lower is better) Translates to: VRYLLSIRHRKDSEMVNGKTYQN*GLDGSL Trigger: TAGGCTTCCATCTAAGCCCCAGTTTTGGTATGTCTT...CCCATTAACCATCTCACTGTCTTTCCTGTGCCTAATACTCAATAAATATCTTAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100136.4 |
||
| CDS-3UTR CCA 90 bp | AGATATTTATTGAGTATTAGGCACAGGAAAGACAGTGAGATGGTTAATGGGAAACTAGTGTGGCCTTGTTaGCCTGAAGATTCTTTAAGG | + |
|
Preference number: 4 (lower is better) Translates to: RYLLSIRHRKDSEMVNGKLVWPC*PEDSLR Trigger: CCTTAAAGAATCTTCAGGCCAACAAGGCCACACTAG...TTTCCCATTAACCATCTCACTGTCTTTCCTGTGCCTAATACTCAATAAATATCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100136.4 |
||
| CDS CCA 90 bp | AGCCTATGGGGCGAGCACCTGGGACCTGCTCCCCGTGGGATGATCTaGAACAGGAGCCTGCCGGGAAGGGCCCATAGGCTAGGCCTGTTG | + |
|
Preference number: 5 (lower is better) Translates to: SLWGEHLGPAPRGMI*NRSLPGRAHRLGLL Trigger: CAACAGGCCTAGCCTATGGGCCCTTCCCGGCAGGCTCCTGTTCCAGATCATCCCACGGGGAGCAGGTCCCAGGTGCTCGCCCCATAGGCT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100136.4 |
||
| CDS CCA 90 bp | GGGCCCACAGCTCTGCTCCTTTCTGCTGAGCTTGGGGAAAGTATGTaGTGGACACCATCCACTAGACCCAACAGCAGCAGCAGGAGGAGA | + |
|
Preference number: 5 (lower is better) Translates to: GPTALLLSAELGESM*WTPSTRPNSSSRRR Trigger: TCTCCTCCTGCTGCTGCTGTTGGGTCTAGTGGATGGTGTCCACCACATACTTTCCCCAAGCTCAGCAGAAAGGAGCAGAGCTGTGGGCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100136.4 |
||
| CDS CCA 90 bp | CCCACAGCTCTGCTCCTTTCTGCTGAGCTTGGGGAAAGTATGTGGTaGACACCATCCACTAGACCCAACAGCAGCAGCAGGAGGAGAACT | + |
|
Preference number: 5 (lower is better) Translates to: PTALLLSAELGESMW*TPSTRPNSSSRRRT Trigger: AGTTCTCCTCCTGCTGCTGCTGTTGGGTCTAGTGGATGGTGTCCACCACATACTTTCCCCAAGCTCAGCAGAAAGGAGCAGAGCTGTGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100136.4 |
||
| CDS-3UTR CAA 90 bp | AACTTTTTCTGGCACTTCAGATCCAGGCCCCTGAGGCTTCAGGGAGGATTGTGGTCCTTTCTGCTGAGCTaGGGGAAAGTATGTGGTGGA | + |
|
Preference number: 5 (lower is better) Translates to: NFFWHFRSRPLRLQGGLWSFLLS*GKVCGG Trigger: TCCACCACATACTTTCCCCAAGCTCAGCAGAAAGGA...CCACAATCCTCCCTGAAGCCTCAGGGGCCTGGATCTGAAGTGCCAGAAAAAGTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000100136.4 |
||
| CDS CCA 72 bp | GGCGAGCACCTGGGACCTGCTCCCCGTGGGATGATCTaGAACAGGAGCCTGCCGGGAAGGGCCCATAGGCTA | + |
|
Preference number: 6 (lower is better) Translates to: GEHLGPAPRGMI*NRSLPGRAHRL Trigger: TAGCCTATGGGCCCTTCCCGGCAGGCTCCTGTTCCAGATCATCCCACGGGGAGCAGGTCCCAGGTGCTCGCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100136.4 |
||
| CDS CCA 72 bp | AAGCCTATGGGGCGAGCACCTGGGACCTGCTCCCCGTaGGATGATCTGGAACAGGAGCCTGCCGGGAAGGGC | + |
|
Preference number: 6 (lower is better) Translates to: KPMGRAPGTCSP*DDLEQEPAGKG Trigger: GCCCTTCCCGGCAGGCTCCTGTTCCAGATCATCCCACGGGGAGCAGGTCCCAGGTGCTCGCCCCATAGGCTT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100136.4 |
||
| CDS TCA 72 bp | TATGGGGCGAGCACCTGGGACCTGCTCCCCGTGGGATaGTCTGGAACAGGAGCCTGCCGGGAAGGGCCCATA | + |
|
Preference number: 6 (lower is better) Translates to: YGASTWDLLPVG*SGTGACREGPI Trigger: TATGGGCCCTTCCCGGCAGGCTCCTGTTCCAGATCATCCCACGGGGAGCAGGTCCCAGGTGCTCGCCCCATA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100136.4 |
||
| CDS CAA 72 bp | AGGAGCCTGCCGGGAAGGGCCCATAGGCTAGGCCTGTaGCTTCCCACTGAAGCTCCAGGGCCCACAGCTCTG | + |
|
Preference number: 6 (lower is better) Translates to: RSLPGRAHRLGL*LPTEAPGPTAL Trigger: CAGAGCTGTGGGCCCTGGAGCTTCAGTGGGAAGCAACAGGCCTAGCCTATGGGCCCTTCCCGGCAGGCTCCT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100136.4 |
||
| CDS CAA 90 bp | ATCTGGAACAGGAGCCTGCCGGGAAGGGCCCATAGGCTAGGCCTGTaGCTTCCCACTGAAGCTCCAGGGCCCACAGCTCTGCTCCTTTCT | + |
|
Preference number: 6 (lower is better) Translates to: IWNRSLPGRAHRLGL*LPTEAPGPTALLLS Trigger: AGAAAGGAGCAGAGCTGTGGGCCCTGGAGCTTCAGTGGGAAGCAACAGGCCTAGCCTATGGGCCCTTCCCGGCAGGCTCCTGTTCCAGAT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100136.4 |
||
| CDS CCA 72 bp | GTGAGCTGGGTCCCACCACCAAAGACATACCAAAACTaGGGCTTAGATGGAAGCCTATGGGGCGAGCACCTG | + |
|
Preference number: 6 (lower is better) Translates to: VSWVPPPKTYQN*GLDGSLWGEHL Trigger: CAGGTGCTCGCCCCATAGGCTTCCATCTAAGCCCCAGTTTTGGTATGTCTTTGGTGGTGGGACCCAGCTCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100136.4 |
||
| CDS GCA 72 bp | TGTTGCTTCCCACTGAAGCTCCAGGGCCCACAGCTCTaGTCCTTTCTGCTGAGCTTGGGGAAAGTATGTGGT | + |
|
Preference number: 6 (lower is better) Translates to: CCFPLKLQGPQL*SFLLSLGKVCG Trigger: ACCACATACTTTCCCCAAGCTCAGCAGAAAGGAGCAGAGCTGTGGGCCCTGGAGCTTCAGTGGGAAGCAACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100136.4 |
||
| CDS CCA 72 bp | CTGCTCCTTTCTGCTGAGCTTGGGGAAAGTATGTGGTaGACACCATCCACTAGACCCAACAGCAGCAGCAGG | + |
|
Preference number: 6 (lower is better) Translates to: LLLSAELGESMW*TPSTRPNSSSR Trigger: CCTGCTGCTGCTGTTGGGTCTAGTGGATGGTGTCCACCACATACTTTCCCCAAGCTCAGCAGAAAGGAGCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100136.4 |
||
| CDS CCA 72 bp | GCTCTGCTCCTTTCTGCTGAGCTTGGGGAAAGTATGTaGTGGACACCATCCACTAGACCCAACAGCAGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: ALLLSAELGESM*WTPSTRPNSSS Trigger: GCTGCTGCTGTTGGGTCTAGTGGATGGTGTCCACCACATACTTTCCCCAAGCTCAGCAGAAAGGAGCAGAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100136.4 |
||